CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023965	Proteus vulgaris strain FDAARGOS_366 chromosome, complete genome	4 crisprs	cas3,DEDDh,csa3,WYL,DinG	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023965_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023965_1

497096-497188

Orphan

Consensus_repeat	Method
AGTCAACAACGCTACAGCTTGAAGTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023965_1

>merge|NZ_CP023965|1|497096-497188|CRISPRCasFinder
AGTCAACAACGCTACAGCTTGAAGTATGACGAGTATAGAAGTATGTGACTAGTGCGAGAGAATATAGTCAACAACGCTACAGCTTGAAGTATG

>NZ_CP023965|1|1|497096-497188|CRISPRCasFinder
AGTCAACAACGCTACAGCTTGAAGTATG	ACGAGTATAGAAGTATGTGACTAGTGCGAGAGAATAT
AGTCAACAACGCTACAGCTTGAAGTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023965.1\|WP_098941299.1\|502868_504518_-\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|129911
NZ_CP023965.1\|WP_006535549.1\|489494_489764_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|179867
NZ_CP023965.1\|WP_098941292.1\|493008_494349_-\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|182409
NZ_CP023965.1\|WP_098941293.1\|495053_495836_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP023965.1\|WP_023583501.1\|495984_496743_-\|uridine-phosphorylase	unknown	unknown	gnl\|CDD\|183018
NZ_CP023965.1\|WP_023583497.1\|489889_491527_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP023965.1\|WP_098941298.1\|501993_502866_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP023965.1\|WP_098941291.1\|488975_489491_-\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|179334
NZ_CP023965.1\|WP_098941301.1\|505556_506903_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP023965.1\|WP_075672293.1\|492169_492925_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP023965.1\|WP_098941290.1\|488186_488972_-\|Sec-independent-protein-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP023965.1\|WP_098941295.1\|497736_498564_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023965.1\|WP_075672295.1\|491526_492168_-\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP023965.1\|WP_075672289.1\|494451_494982_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP023965.1\|WP_098941296.1\|498745_501019_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP023965.1\|WP_098941297.1\|501125_502079_+\|HTH-type-transcriptional-regulator-MetR	unknown	unknown	gnl\|CDD\|185319
NZ_CP023965.1\|WP_098941300.1\|504925_505429_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182263
NZ_CP023965.1\|WP_098941294.1\|497265_497658_+\|DUF937-domain-containing-protein	unknown	unknown	gnl\|CDD\|226276
NZ_CP023965.1\|WP_098941302.1\|507647_508835_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP023965.1\|WP_098941303.1\|509035_509782_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667

Protein	Function_ID	Function_description	E-value
NZ_CP023965.1\|WP_098941299.1\|502868_504518_-\|Na+/H+-antiporter	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	1.08059e-176
NZ_CP023965.1\|WP_006535549.1\|489494_489764_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|179867	PRK04598, tatA, twin-arginine translocase subunit TatA.	1.29934e-27
NZ_CP023965.1\|WP_098941292.1\|493008_494349_-\|DNA-recombination-protein-RmuC	gnl\|CDD\|182409	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional.	0
NZ_CP023965.1\|WP_098941293.1\|495053_495836_-\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.33724e-74
NZ_CP023965.1\|WP_023583501.1\|495984_496743_-\|uridine-phosphorylase	gnl\|CDD\|183018	PRK11178, PRK11178, uridine phosphorylase; Provisional.	0
NZ_CP023965.1\|WP_023583497.1\|489889_491527_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP023965.1\|WP_098941298.1\|501993_502866_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.166e-61
NZ_CP023965.1\|WP_098941291.1\|488975_489491_-\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|179334	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB.	1.55112e-50
NZ_CP023965.1\|WP_098941301.1\|505556_506903_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	5.65643e-145
NZ_CP023965.1\|WP_075672293.1\|492169_492925_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	1.48448e-145
NZ_CP023965.1\|WP_098941290.1\|488186_488972_-\|Sec-independent-protein-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	1.74668e-162
NZ_CP023965.1\|WP_075672295.1\|491526_492168_-\|SCP2-domain-containing-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	1.20944e-60
NZ_CP023965.1\|WP_075672289.1\|494451_494982_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.89774e-31
NZ_CP023965.1\|WP_098941296.1\|498745_501019_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP023965.1\|WP_098941297.1\|501125_502079_+\|HTH-type-transcriptional-regulator-MetR	gnl\|CDD\|185319	PRK15421, PRK15421, HTH-type transcriptional regulator MetR.	5.96959e-166
NZ_CP023965.1\|WP_098941300.1\|504925_505429_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182263	PRK10140, PRK10140, N-acetyltransferase.	3.7116e-50
NZ_CP023965.1\|WP_098941294.1\|497265_497658_+\|DUF937-domain-containing-protein	gnl\|CDD\|226276	COG3753, COG3753, Uncharacterized protein conserved in bacteria [Function unknown].	6.29768e-20
NZ_CP023965.1\|WP_098941302.1\|507647_508835_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.46995e-81
NZ_CP023965.1\|WP_098941303.1\|509035_509782_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.00924e-16

>NZ_CP023965.1|WP_023583501.1|495984_496743_-|uridine-phosphorylase
MSDVFHLGLTKNDLQGATLAIVPGDPKRVEKIAKLMDNPVHLASLREYTSWRGEIDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQEHINVGDILVTTAAVRLDGASLHFAPMEFPAVSDFECMNALYKAAKDNGSTVHVGVTASSDTFYPGQERYDTYTGRVVRRFKGSMKEWQEMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPDAELLKKTENNALGIVIEAARILMK
>NZ_CP023965.1|WP_098941293.1|495053_495836_-|tyrosine-protein-phosphatase
MTDILQTHPSVLPLVGGINFRDLGGKKLSNGGVIKPGMLFRSGSLDRLTNTDQSLLIDKNLFQIIDYRDSGEIVDKPDRVWDGAQYYHAPANPLSKEVSANLEKLTPEILEQFDAKAFMFQLYKLLPINNPAYKQLATLLTQPEKGGVVQHCAVGKDRTGVGSALVLFALGASLDVVMEDYLLTNETLAPYRAYLLEEHAKTMSDNIVDKFAYVYSVQEEFLQTALASINQHYGNVDTWLEKDIGLDASSRDALQNYFLE
>NZ_CP023965.1|WP_075672289.1|494451_494982_-|DedA-family-protein
MTVQDIIHTITLFVKEHEIWAIPIVFFLAFGESLAFISLLIPATVILLGLGALIGESGLFFWPIWLAAALGAFFGDWVSYWVGFHYKEGVKNLWPISRSPQTLVRGHQFFNRWGIWGVFIGRFFGPFRAIVPLVAGICAMPQRYFQIANLTSAMIWAFGILAPGAFGLQWLAKWMG
>NZ_CP023965.1|WP_098941292.1|493008_494349_-|DNA-recombination-protein-RmuC
MDIQLLYGIIGLLGGVLVGGALVWWSIQQRLSDKEAMLRENHTQLAIAQEKAVIIPSLQQHIEQLEQELRAQREIITSQEAELREVTTRWEESRISAEEKQRLLINSEQRLATQFENLANRIFEQSGRKAEELNRQGLTHLLSPFREQLESFRRQVQDGFGQEARERHTLVHEIRQLQQLNVKMAQEAVNLTNALKGDNKVQGNWGETVLARILESSGLREGHEFETQVSIRHENGSRYQPDVIVHLPHGRDVIIDAKMSLVAYEKYFSSDNDNERKQALYAHVNSIRAHIKGLSVKDYHKLPGVTSLDYVLMFIPIEPAYLVAIGHSPDLLEEALKNNIMLVGPSTLLVALRTIAALWRYEYQSQNAQEIADRAAKMYDKLRLFVDDMQGLGNSIQKAQSGYLLAMKKLSEGRGNLISQAEGFKSLGVEIKKTIDNDLIEKSASD
>NZ_CP023965.1|WP_075672293.1|492169_492925_-|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MTQQTKETTDFGFQTVDKDDKQTMVARVFHSVASKYDLMNDLMSFGVHRIWKRYTIEASGVRRNQRVLDLAGGTGDLTAKFSRLVGENGEVVLADINDSMLKMGREKLRDHGIVGNVNYVQANAEELPFPDNHFDCITISFGLRNVTDKAKALRSMFRVLKPGGRLLVLEFSKPVLDPLSKIYDAYSFHILPKIGQVIVNDAESYRYLTESIRMHPDQETLKGMMEEAGFDQVTYTNMTGGIVALHKGFKF
>NZ_CP023965.1|WP_075672295.1|491526_492168_-|SCP2-domain-containing-protein
MEKATFSHDIASQVLYPLLTASMETALNHVLYQENVLKPARNRLAGKVLALSINEFPRSIYLVFSEQQVDVLSQWDDETDCLIKTKLLTLIKLRDRQKMSELINRGDITIDGDMQVVQNWSALLDMAQWDPAQYLAPYIGDIAAQSLTVVAGKGVQLFSSLLSHQKDYLRDALIEEWKTAPSALETVHFYDEIEELAQQTAELEKRLGTLEKK
>NZ_CP023965.1|WP_023583497.1|489889_491527_-|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MLLSELKRLYHIIQVFLSYGLDELIPKHRITLPARLGCRALFWIKNKHPEKPLGERLRLALQTLGPVWIKLGQMLSTRRDLFPPQIADQLALLQDKVAPFDGKKARQYIENSFGGPIDQWFDDFDETPLASASIAQVHTAKLKENGKEVVLKVIRPDIQPVIKADIRLMYRLANLLPFLPDGRRLRPKEVIREYEKTLLDELNLLREAANAIQLRRNFENSSMLYIPEVYSDYCHENVMVMERIYGIPVSDIEALNAQKTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNVFISYDHPENPYYIGIDCGIVGSLNKEDKRYLAENFLAFFNRDYRKVAELHVDSGWVPADTNVEDFEFAIRTVCEPIFEKPLSEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFLEDWLHSQIGITALVNGIKSKAPYWIEKMPEIPELVYDSLKQHKNMKLTLDKLTEQISSQRVKQRQSLFLLGIGTTLFLCGSLFFVSGFKTLFSVFISLGLLAWILGWFRSGNAQ
>NZ_CP023965.1|WP_006535549.1|489494_489764_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGGISIWQLLIIAVIVVLLFGTNKLRTLGSDLGASVKGFKKAIGDEAADKDTNNAEKTNNDADFDTKNLAQKTSTEEKSTTESKNKEQV
>NZ_CP023965.1|WP_098941291.1|488975_489491_-|Sec-independent-protein-translocase-subunit-TatB
MFDIGFSQLLLVMVIGLVFLGPERLPVAVKTIAGWVRALRSLAANVQNELTQELKLQELQESLKKVEEKANLQTLSPELKASMDELKEAAQSLKQTYQTPTTPDSTKGQSVKTDSTEPSPSDLAALAEADEVNDDANRHKPVAESVTKTEVPVTQPVTLEKKTTDQVNGEH
>NZ_CP023965.1|WP_098941290.1|488186_488972_-|Sec-independent-protein-translocase-subunit-TatC
MAVNDTQPLISHLIELRKRLMYSLVSVLVVFLALVYFSNDIYQLVSAPLLEKLPKGSNMSATDVASTFLTPIKLTIMVSVFASVPVILYQVWAFIAPALYKHERRLMLPLLVSSTVLFYLGMAFAYFVVFPLAFGFFVNTTPEGVNFIPDISKYLSFVMTLFMAFGAAFEVPIAIILLCWSGVTTPDALKKKRPYILVGAFVVGMVLTPPDVFSQTLLAIPMYLLFEIGVMVSRFYVGKGRRADEEEAEEAEAEAEAEQQK
>NZ_CP023965.1|WP_098941294.1|497265_497658_+|DUF937-domain-containing-protein
MSLFNQIASLLGGEKINQYKTVLEWIGSQGGIEGLVKQFDTAGLSELIQSWISTNTNLPISAEQIVAVFSSPVINELASKINLSTTEASEMAAQYLSKLIDKVTPDGVVPKDLDLVSAGMDILKAKIFGG
>NZ_CP023965.1|WP_098941295.1|497736_498564_-|hypothetical-protein
MDIIIVQTSIKLSDKVLDAFPTRPLKLVPLRGDGGLFRTLFLVIFMLAMTVFSAYQIPNILYDYKISKNAVPVDATVKGSCRSQLFVLTNCSVDLRYKGNEVSRNFTFLDLGPKDVLVEPVADANDLSKMTVDVAIDNIWLRLISTIIFIGLFGFSVIFFIYRQTLTSKVRKALLSVGTQPLKLIAIPAKMVVSNKQFIATYHLNLEGKDIRIAYSGNKKTPPIVIEQNGNTYVLAVYSPQQNIPYALDVPLERIQATPEEKQRFHESLIEEGLL
>NZ_CP023965.1|WP_098941296.1|498745_501019_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTIRNHTLGFPRIGLDRELKKAQENYWAGKISQEELIAVGKALRARHWQQQADAGVDLLPVGDFAWYDQVLGTSLLLGNVPPRHRNEDGSLDLDTLFRVARGRAPTGKPVAASEMTKWFNTNYHYIVPEFQQGQSFTFAWKELLEEVDEALALGHKVKPVLLGPVTYLWLGKVKGPEFDRLTLLKDILPIYQQVISALKEKGIEWVQIDEPALVLDLPVEWQNAYQTAYQALTGQVKLLLTTYFDGISHHLDIIKNLPVNGLHVDISAGQDDLQHLHQALPKDWVLSLGAINGRNVWKADLSTRYQQVIALKDKRPLWIGTSCSLLHSPIDLNAETKLDDEVKSWFAFAVQKCEEVALLANALNAPDGEYDEQLAQYSAPIRQRQHSTRVHNATVEARLQAIEAQDSERNSPYTQRAEVQRARFNLPLWPTTTIGSFPQTTEIRTVRLDFKKGRIDTAAYRTNISEHIKQAISEQENLGLDVLVHGEAERNDMVEYFGEHFDGYVFTQNGWVQSYGSRCVKPPVIIGDISRPAPITVDWATYAQSLTEKPVKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVDDLQKAGIGIIQIDEPALREGLPLRRNEWQAYLNWAVDAFKLSAAIADDETQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLEAFEHFDYPNEIGPGVYDIHSPNVPNVEWIVGLLRKAQSRIPAERLWVNPDCGLKTRGWPETRAALANMVEAAKYLRQNV
>NZ_CP023965.1|WP_098941297.1|501125_502079_+|HTH-type-transcriptional-regulator-MetR
MIEIKHLKTILALKHTGSLANAANQLHQTQSALSHQFSELEHRLGYRIFVRKSQPLRFTSQGEVLVKLAEEVLPIVRRAIESCNEPGSVNLNIAIECHSCIQWLTPALQQYRQTWPEVTVDFHSGVTFDPQPALLQRELDVVLTSDILDDPRLHYTPLFDYEVKLVLSPDHPLANRLHIQPQDLIAETLFIYPVQRERFDVWRHFLQPAGITPHFKHVDNTLLLIQMVAAGMGIAALPHWAVDNFEKQGLVVTKTLGEGLWSRLYAANRSGEQHQPAIREFIRLSGQHAVNNLPFVKQVGVSSVDGSKVMQQSGSRL
>NZ_CP023965.1|WP_098941298.1|501993_502866_-|DMT-family-transporter
MWLLVITTLLWAASFSLIGEYLAGQVDSWLSVLIRVSLAALVFLPFLRWKGIRFKVILLYMLVGACQLGIMYLFVFHAYNYLTVAEFLLFTVLTPLYVTLIYDLLERQKLRWGYAFSSLLAVLGAAIIRYDHLSDDFWYGLLLVQLANIFFAIGQVGYKRLMEVHPIPQHHAFSWFYLGAVAVSLVGALFFADWQKMPTTSLQWGVLLWLGIGASGIGYFMWNYGATQVDAGTLAIMNNMMVPAGLLVNFSIWQQHPNWPSFIIGASLIVASLWIHRRWIHRPVLQKEDC
>NZ_CP023965.1|WP_098941299.1|502868_504518_-|Na+/H+-antiporter
MEIFFTILILILVVSVSGVITKLIPFRVPLPLIQIVIGALLAWPQFGLHVTFDPELFLVLLIPPLLFVDGWKTPTREFIQNGREIFILVLVLVMVTVVGIGYLIYWMMPSIPLISAFALAAVLSPTDAVALSSIVGKGRIPKRIMGILEGEALMNDASGLVALKFAVAVAMGTMVFTVGGATLEFFKVAVGGLLAGIGVTLLYSKSLRLMSRWSGDDPATQIVFMLLLPFASYLIAEHIGFSGILAAVAAGMTISKSGVIRNAPLAMRLRADSVWSMLEFVFNGLVFIMLGLQLPIIWTSSVIQADLDPEVEVWMLFAAVFVIYFALLILRFTWLWLMKKISRIFMKKHPLDFANYTTRELWLSSFAGVRGAITLAGALSIPLFLTDGSTFPGRYQIIFIAAGVILLSILVGIISLPFLLKGVKATDKEADKNEVRYARKVMAEVAIVSLNKMEERLAASTEEQLDAEEINEVASRVTGYLRRRTADQDEMVHNALEEDLERRFRLTALRAERGELYHLRATRKISNETLQLLLHELDLMEALLVEKDS
>NZ_CP023965.1|WP_098941300.1|504925_505429_-|GNAT-family-N-acetyltransferase
MQEIKIRHGEPDDASAIQQLYTHPDLYICTCQFPYPSVTMWKKRLLEFSEQNIPNFVATIDGQVAGHLALIIDNHPRRRHIVSFGIGVGAEYSGKGVGKLLINTAIDYAFNWLAATRLELEVYSDNERGLHLYKKLGFEVEGIRRKAAFREGKYCDVVMMSMLRTIE
>NZ_CP023965.1|WP_098941301.1|505556_506903_-|NCS2-family-permease
MSANQSASTGKLDSYFKLTARGTTVRKEMIAGLTTFLAMVYSVIVVPSMLGQAGFPHTAVFIATCLVAGLGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQNISVPVALGAVFLMGCLFTVFSLTGIRTWILKNIPIGIAHGAGIGIGLFLLLIAANSVGLVVKNPFDGLPVAMGKFTSFSVLMSLAGLAAIFGLEKRKVPGGVLLVIVAISIIGLIFDPNVKYQGIFKMPQLGEDGLSLLFAMDIKGALQPLVLPSVLALVMTAIFDATGTIRAVAGQANLLDKRGQIINGGKALTSDSVSSIFAGVIGAAPAAVYVESAAGTAAGGKTGLTATVVGILFLLILFLSPLSYLVPAYATAPALMYVGLLMLGNVTKLDFSDFVDAMSGMVCAVFIVLTCNIVTGIMLGFGCLVIGRVFAGEWRKLNIGTVLITIALVVFYAGEWAI
>NZ_CP023965.1|WP_098941302.1|507647_508835_-|MFS-transporter
MSHQNYRQSEVFAITTITVSIGVIGIVIGLTIPMVALRLNLAGISESLIGLISAAPAIGMLIISPFARHIVQWIGKRFAMLLATIVSAISLLPLMGSLPLELLFPLRLITGIASGVMICLGETWINELSPDNKRGRILAVYTTVFTISQLLGPSIIALYGVADKTPILISVFIHIISIVLFLMMDQKTGDKLPKDTQEPNFSIIRFVKVAPAICGGIVFFAFFDGTVLSMFPIYGLSVGHTEAIAAMMISAILAGDAIMQMPFGWLADHMNRTRLYRICGVVTLLASLLLPITMSHTFLIWPLLLVLGATAGAIYTIALVQIGQYFSGNDLMVANASAAMLWGIGNLSGPLLAGALSEISSSSLPFLLVAMTGLFLVSTMERWNLGVEALNSSSS
>NZ_CP023965.1|WP_098941303.1|509035_509782_-|sulfite-exporter-TauE/SafE-family-protein
MMDLLSWSDLFICLLTLFFAYVIFGMAGFGSALIAGPVLALYLPLSMIVPLLALIDLSAAIVNVVRDGKQADFKEIRYLIPLIIIGSLVGATILLTTRPDLLSLLLGIFAACYAIYALFWKKQESQFSQRLVYPFGLIGGVFSALFGSGGFLYAIYLSGRIADKNKFRITQTTLIGFSTLTRVVIFLFAGIYWQLDILKLAVIFLPAMFAGVWLGRNLTLQMSKARFMSVIYTIVLASGTVLIYRYFS

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Crispr_ID: NZ_CP023965_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023965_2

1235651-1235730

Orphan

Consensus_repeat	Method
CACGGTGAAGAAGGCGGATGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023965_2

>merge|NZ_CP023965|2|1235651-1235730|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTGTGGCGGTGGTCACGGTCACGGTCACGGTCATTCACACGGTGAAGAAGGTGGATGCTG

>NZ_CP023965|2|2|1235651-1235730|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTG	TGGCGGTGGTCACGGTCACGGTCACGGTCATTCA
CACGGTGAAGAAGGTGGATGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023965.1\|WP_098941723.1\|1239529_1239925_+\|sulfurtransferase-complex-subunit-TusD	unknown	unknown	gnl\|CDD\|178928
NZ_CP023965.1\|WP_023583301.1\|1238815_1239520_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225512
NZ_CP023965.1\|WP_098941716.1\|1226080_1227826_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP023965.1\|WP_098941714.1\|1223426_1224287_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|183195
NZ_CP023965.1\|WP_036914399.1\|1234860_1235064_+\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|226060
NZ_CP023965.1\|WP_088494382.1\|1236430_1237183_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236791
NZ_CP023965.1\|WP_098941718.1\|1230386_1232321_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236729
NZ_CP023965.1\|WP_098941713.1\|1222105_1222711_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023965.1\|WP_098941712.1\|1221025_1222006_-\|hydrolase	unknown	unknown	gnl\|CDD\|182883
NZ_CP023965.1\|WP_023583298.1\|1235877_1236096_-\|SlyX-family-protein	unknown	unknown	gnl\|CDD\|179472
NZ_CP023965.1\|WP_004246897.1\|1241218_1241689_+\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP023965.1\|WP_098941720.1\|1232993_1234847_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	unknown	unknown	gnl\|CDD\|179625
NZ_CP023965.1\|WP_098941725.1\|1240324_1240618_+\|sulfurtransferase-complex-subunit-TusB	unknown	unknown	gnl\|CDD\|184101
NZ_CP023965.1\|WP_004236497.1\|1240745_1241120_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP023965.1\|WP_098941717.1\|1228366_1230055_-\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP023965.1\|WP_098941724.1\|1239924_1240293_+\|sulfurtransferase-complex-subunit-TusC	unknown	unknown	gnl\|CDD\|178930
NZ_CP023965.1\|WP_098941715.1\|1224436_1225981_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP023965.1\|WP_098941719.1\|1232442_1232994_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	unknown	unknown	gnl\|CDD\|179895
NZ_CP023965.1\|WP_162556834.1\|1238309_1238468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023965.1\|WP_098941722.1\|1237281_1238163_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769

Protein	Function_ID	Function_description	E-value
NZ_CP023965.1\|WP_098941723.1\|1239529_1239925_+\|sulfurtransferase-complex-subunit-TusD	gnl\|CDD\|178928	PRK00207, PRK00207, sulfurtransferase complex subunit TusD.	7.83793e-75
NZ_CP023965.1\|WP_023583301.1\|1238815_1239520_+\|transcriptional-regulator	gnl\|CDD\|225512	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown].	5.86016e-99
NZ_CP023965.1\|WP_098941716.1\|1226080_1227826_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	9.65009e-112
NZ_CP023965.1\|WP_098941714.1\|1223426_1224287_+\|SIS-domain-containing-protein	gnl\|CDD\|183195	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator.	5.59475e-86
NZ_CP023965.1\|WP_036914399.1\|1234860_1235064_+\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|226060	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].	6.65397e-29
NZ_CP023965.1\|WP_088494382.1\|1236430_1237183_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236791	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	2.80494e-140
NZ_CP023965.1\|WP_098941718.1\|1230386_1232321_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236729	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional.	0
NZ_CP023965.1\|WP_098941713.1\|1222105_1222711_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	7.78197e-29
NZ_CP023965.1\|WP_098941712.1\|1221025_1222006_-\|hydrolase	gnl\|CDD\|182883	PRK10985, PRK10985, putative hydrolase; Provisional.	0
NZ_CP023965.1\|WP_023583298.1\|1235877_1236096_-\|SlyX-family-protein	gnl\|CDD\|179472	PRK02793, PRK02793, phi X174 lysis protein; Provisional.	1.65095e-19
NZ_CP023965.1\|WP_004246897.1\|1241218_1241689_+\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	4.22371e-104
NZ_CP023965.1\|WP_098941720.1\|1232993_1234847_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	0
NZ_CP023965.1\|WP_098941725.1\|1240324_1240618_+\|sulfurtransferase-complex-subunit-TusB	gnl\|CDD\|184101	PRK13510, PRK13510, sulfurtransferase complex subunit TusB.	1.28253e-37
NZ_CP023965.1\|WP_004236497.1\|1240745_1241120_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.89954e-89
NZ_CP023965.1\|WP_098941717.1\|1228366_1230055_-\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	9.12443e-114
NZ_CP023965.1\|WP_098941724.1\|1239924_1240293_+\|sulfurtransferase-complex-subunit-TusC	gnl\|CDD\|178930	PRK00211, PRK00211, sulfurtransferase complex subunit TusC.	4.10501e-59
NZ_CP023965.1\|WP_098941715.1\|1224436_1225981_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	1.92105e-74
NZ_CP023965.1\|WP_098941719.1\|1232442_1232994_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	gnl\|CDD\|179895	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional.	8.11548e-116
NZ_CP023965.1\|WP_098941722.1\|1237281_1238163_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.77851e-08

>NZ_CP023965.1|WP_036914399.1|1234860_1235064_+|YheV-family-putative-metal-binding-protein
MSATRKRFIAGAVCPHCQAQDTLKMWREDKVDIVECAKCGHQQRQTEGEVNSLVRENEQVIGIFTPQ
>NZ_CP023965.1|WP_098941720.1|1232993_1234847_+|glutathione-regulated-potassium-efflux-system-protein-KefB
MEDNWMIKAVLFFLCAAVIMVPIAQRLKIGAVLGYLIAGIAIGPWGLGLFKDVDNILHFAELGVVFLMFLIGLELNPAKLWELRRAIFGVGSMQVVLTASIFSGLILVFTSFSWQAAVIGGLGIAMSSTAMALQLMNEKGMNHNEGGQLGFAVLLFQDMAVIPILAVIPLLAGETASSDWYRIGVKVAAFAGLLICGRYLLRPLLRLVVKSGVREVFTAAALLVVLGAAIFMETLGFSMAMGTFIAGVLLADSEYRHELEISIEPFKGLLLGLFFISVGMSLDIGILWRYLPQVLLGVLVLVIVKALILYSIAWLARLRFSTRLQFSAVLSQGGEFAFVVFSTSMAMGVLDSQQMALLLVVVTLSMMTTPLVMQMTDAVFARRYNDAKTDEQPFVENNHPEVILVGFGRMGQVVGRLLMANKINVTVLEHDVGSISTMRKYGYKVYYGDATDLNLLRAAGAEHAKTIVITCNEPEATMEIVHLCQHHFPNLHIIARARGRVEAHELLKAGVTDFSRETFSSALELGRKTLIELGMHPHQAYRAQQHFRRLDINLLRKLVDESPEEVSNVSRVKEARRELEELFSEEIRQEHHQPDIWDESLTEDIPQIHKEKKSIDK
>NZ_CP023965.1|WP_098941719.1|1232442_1232994_+|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG
MSNASNVLLVYVHPEPRQSIANKALLKAVRDLENITIHDLYATYPDFFIDIHHEQSLLCKHQVIVFQFPLQTYSCPALLKEWQDRVLTRPFANKAGRAQLKGKSFRCVITTGEPEQAYQHDGKNHYTLTELLRPFELMAEMCGMRWLSPMIVYSARQQSKTTLTHIGEAYRHWLSAPLEGEQA
>NZ_CP023965.1|WP_098941718.1|1230386_1232321_-|ABC-transporter-ATP-binding-protein
MIVFSSLQIRRGVRVLLDNASATINPGQKIGLVGKNGCGKTTLLSLLKGELQAEAGNVTYPSTWSMAWVNQETPALDVPAIDYVIDGDREYRQLEQRLQKANDINDGHAIALIHGQLDAINAWTIQSRAATLLNGLGFSQQQLNEPVKSFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLILISHDRDFLDPIVNKILHIEQEKIFEYSGNYSSFEMQRATKLAQQQALFENQQAKIAHLQSFIDRFKAKATKAKQAQSRVKMLERMEKVAPAHSDNPFHFSFRQPESLPNPLLSMEKVSAGYGEKIILNDIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGEIEPLQGKLALSKGIKLGYFAQHQLEFLRSDESALQHLTRLAPKETEQKLRDYLGGFGFHGDKVTDACGQFSGGEKARLVLSLLVWQRPNLLLMDEPTNHLDLDMRQALTQALISFEGAIVVVSHDRHLLRSTTDDLYLVHDGQVEPFDGDLDDYQQWLVDQNRQETQANKSQQDNDNITTTTNLSAQDKKEQKRKEAGFRQQTQPLRKKLTTLESKMDKLSQELSDIETVLSDSGIYDTSRKNELSDCLNRQSVAKSALEEVEMEWMELQETLEEMTNTFEAQ
>NZ_CP023965.1|WP_098941717.1|1228366_1230055_-|Tar-ligand-binding-domain-containing-protein
MLKRIKISQGLMCVLTLFCIIQIISGVQSIHDAYQTQNTLKKISYSFDQLRTMDNTYAELNTLRTDIIAQAFSYISNPQAEDANITTFMQTMPARKAQVDALMNEYVELSAQTGFDQQRMAQIKQLYQKSRADLDLLAQYLSERNTNAVRLILKSPANTNFTNSLYEATDFITDEVVNPSVIEAEGNYHSMLWIASLFMGIFLIFTTLVLIWIRKYIIVRINQMIIYQEAIAKGDLVSRIDSDISGKTEIDQLMLGLQQMRAQLKEMVSSIRNTSATIYTGVQEIAAGNNDLSSRTEEQASALEETASSMEQMTATIRNNTESAREVTELVMSTADIAVQGGEHSNKMVMTMTDIADRSQKIGEITAVIDDIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRNLAQRSAEAAKEIKELIESTILRVRQGNDLVEQVSLSMGEIVTSVNHVSGSMKEILSASEEQTRGIAQISLAVNEMDKATQQNAAMVEQSTAASATLSEQASMLDTIVNTFKVEHEKVAPTKTKLPTFSAKSQDTETLKTPTIKTNNHETDDNWESF
>NZ_CP023965.1|WP_098941716.1|1226080_1227826_-|HAMP-domain-containing-protein
MLKRIKISNGLMFILILFCAIQLFSGAMSIRDASLTNKRISQLANGFEQIKTMDYGYAELNKLREDMLNVMFEAHLTPDIAESKISDFISSYPKRKQEITRIITAYFTTTEEADFDPEKIESMKKLFNRVLYDLDQLVSCLEIRDYYGFQSLYAHNTNERFTQSLYEATDYLSDNVVTHAIKAAQGNYERALVLAFVFMFVFILFTVLVVLWIRRNIVLRINQIVDYMSEISQGNLLENKDVTVKGNNEIDQLITGIQYMRTELSLIVNAIRGTSHHIYTGVQELSAGNTDLSCRTEEQASALEETASSMEQLTATVRNNTESAREVSHLISQTSNIASKGGDVTNRMVKTMTDIADSSQKIGEITAVINSIAFQTNILSLNAAVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKELIDASISRVRHGNDLVEQVSISMGEILTSVKHVEDSMTEILSASEEQTRGITQVSLAVTEMDKATQQNATMVEQSSAVASLLTEEAGNLEQIVEQFKTAESEQFNKKAQHKVIEKQFSSEKSQHTKDEKIKNTVKDDVKERKSAKGTATVNDGEDDDWTSF
>NZ_CP023965.1|WP_098941715.1|1224436_1225981_+|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MRNNQPVTQREYPVSENATLMSTTDLDGNIIYANEDFVEASGFSVEELVGQPHNIVRHPDIPSAVFKDMWKTLKQGEVWTGIVKNRRKNGDYYWVRANITPIIRQGKIQSFMSVRTSARKEEIAQASALYAAFNQGKYPSHMFLKGAFVYKGWQRWRSWNQTISLKKRLRLFILLPLPFMLLSAWFAGLSGYALFIHMAILLVLLMANERILYFQIVKPIRLLNEQANRVATGDEHNVTYINRIDEVGMTQRSVNQLGRMFRWLVSDVSHQIHQVDISCDQLAAGNRDLYVRTEQTASNVEATASTMNELTTAVSSNSETAGQANNLSNVTCEAAIKGGSAMDNIVNTMNDIAKSSDRISNIIGVIDSIAFQTNILALNASVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKTLISASSSNIKVGSKQVNETVGTMEDIVVHVKNVTDLIGEISLASSEQSAGLKELGRAVEKLESITHENANYVSKASMISGEMKVQTNYLVSAINVFH
>NZ_CP023965.1|WP_098941714.1|1223426_1224287_+|SIS-domain-containing-protein
MPTLTKIAWIKPGMATNQRKIADYILDNPEKTITLSSQQLAETMGVSQSAIVKFSQKIGFKGFPSLKLAISEELGRKNANSEANPSLLHNQIGSEDSLEVIAQKLAQEKNNSICDTTRQINYLHFEKVIQLIDEAQRVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSPKDLQIVISYSGKRKDMLVAASVAKKQGAKIIAITGEKHSPLGRISDYILETIADEGEWRSASISSRTAQNTITDLIFMALLKKRDECAKTLVLSSQALINSLDN
>NZ_CP023965.1|WP_098941713.1|1222105_1222711_+|LysE-family-translocator
MTISLIFSLTIFLFIAAITPGPNNLLLTSSGANVGFKGSLKLMAGIMLGMQCVLLSSAFGVAALLIIYPALHIGLKIVGSAYLLWLAWKTATSSYQRLDIPAKTPQAVSWFQGGLLQFLNPKAWMMGLGAVGSFSLSGDAYFSSVIAIGLVMVIVNFVAGIVWILGGTLISLFLQSRRSWFVFNISMGLLTALCVPLIWIE
>NZ_CP023965.1|WP_098941712.1|1221025_1222006_-|hydrolase
MSQYFNPMRWAKNPHLQTLLPRIVRRTPQLTPHWQRLNLPDNDFVDLAWSEDPATALDKPRLVIFHGLEGGFSSPYAHGMLAAAKERGWLSVVMHFRGCSGEPNRQNRIYHSGETEDARYFLNWLKKEFGEQPTAAVGYSLGGNMLAYYLAESGENAVVDAAVIVSAPLMLEPCSTKIEHGFSRFYQWYLLKELKSNATRKLIRYPESLPISLLTIKSIKKLRQFDDLITSKIHGFKDALDYYRQCSALPLLNKIKKTTLIIHAKDDPFMSADVIPDVKTLPNNIEYQLTEFGGHVGFVGGKLSKPVMWLENRIPDWLATYLEKAK
>NZ_CP023965.1|WP_023583298.1|1235877_1236096_-|SlyX-family-protein
MDIKEVERLLIQLESKVAFQDATIEELNQVVTQQQIEISRFKEALKIVSERLKNSQTSILARPEDETPPPHY
>NZ_CP023965.1|WP_088494382.1|1236430_1237183_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKSLLKTTLLATSLAFAFSAPHAFAEEATAKVPTLNSAFKTQNEQNAYALGASMGRYMEAALQEQKNIGITLDSKQLLAGVQDAFNSKSKLSDAEIELTLAAFEDQVRTAATAKMEKEATENKTAGDKFRTEFAAEKGVVKTKSGLLYLVENPGKGKTPTDADRVTVNYKGMLIDGKQFDSSYDRNEPLTISLKSVIPGWTEGMKYIKEGGKIKLVIPPELGYGQRATSGIPANSTLVFEVELLSVESDK
>NZ_CP023965.1|WP_098941722.1|1237281_1238163_-|DMT-family-transporter
MYLRQYWVKFGPTTLFVLLWSSGAIFSRWGLDNGSSFAILTWRFIIALAFLSFLCIQRHRFLPPKGSRLKTAWVGLLIIGGYSICYLLALANSITPGMLATIMGVQPIITLWIIERNFTATRLLGLLIALAGLVLVVAQSLFNTALSLTGMVYALVALLCMSFGAISQKKLQLAPMDALPLQYVVSLVLCLLFVPFQPFHASFDIGFIIPVLWLAVIISVVAQLLLYRLLTTGNLVNVTSLFYLVPGVTALMDYIFLGNKMSWLSLAGMGAIIVGLLFVFKKPKAIIVEETVD
>NZ_CP023965.1|WP_162556834.1|1238309_1238468_-|hypothetical-protein
MNILMICQSQQTSSIIGLISVASMPIEILSSPPPPVKVVVVNTTVVVATRVA
>NZ_CP023965.1|WP_023583301.1|1238815_1239520_+|transcriptional-regulator
MSSPLFNGDSSEFEKLDSRPFTQTDHEILKSYEAAVDGLAMLIGNHCEIVLHSLEDLKCSAVKIANGEHTGRKIGSPITDLALQMLHDITDEDSSFSKAYFTRAKSGALMKSITIAIRNRERRVIGLLCINMNLDVPFSEIIKTFIPEETHEVASDVNFASSVDDLVAQTLEFTIEEVNNDREVANNAKNKQVVLSLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKNGE
>NZ_CP023965.1|WP_098941723.1|1239529_1239925_+|sulfurtransferase-complex-subunit-TusD
MSSLTYCLVVTGPHYGTEQASSAYLFANALLEKGHKISQVFFYREGVVNANKLVSPANDEFDLPKAWVTLAKKHQIPLHVCVAAALRRGIIDEQQAKEQEMDSHNMATEFELSGLGSLAQAMLTCSRVVQF
>NZ_CP023965.1|WP_098941724.1|1239924_1240293_+|sulfurtransferase-complex-subunit-TusC
MKKMNSIAFLFTQAPHGNSAGREGLDALLATSALTEDIGVFFISDGVFQLVENQQPEGVLSRHHAATFKVLPLYDVTSVYISQKDMAHRGLSSQTSFVLDAQVISQEDIAQKLSEYDVVLRF
>NZ_CP023965.1|WP_098941725.1|1240324_1240618_+|sulfurtransferase-complex-subunit-TusB
MLYTYSVSIYQSDLEAFLSLLTKEDDVLLIQDGVLAVLEDNPLLKYCLQQQISVYALIDDVLARGLKDQVSHHIKLINYGDFVDLTVKHPQQIHWGA
>NZ_CP023965.1|WP_004236497.1|1240745_1241120_+|30S-ribosomal-protein-S12
MATINQLVRKSRSSKVVKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKKPKA
>NZ_CP023965.1|WP_004246897.1|1241218_1241689_+|30S-ribosomal-protein-S7
MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYNALETLAQRSGKTELEAFEIALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGAAVKKREDVHRMADANKAFAHYRW

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Crispr_ID: NZ_CP023965_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023965_3

2199486-2199635

Orphan

Consensus_repeat	Method
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023965_3

>merge|NZ_CP023965|3|2199486-2199635|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCACATATTGGATTGTTCTAATATATTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

>NZ_CP023965|3|3|2199486-2199635|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CATATTGGATTGTTCTAATATATTGGTGGAGCTAAGCGGGATCGAACCGC
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023965.1\|WP_075670540.1\|2206457_2207237_-\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP023965.1\|WP_098944060.1\|2198643_2199396_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP023965.1\|WP_023581656.1\|2197801_2198017_+\|DUF3820-family-protein	unknown	unknown	gnl\|CDD\|378970
NZ_CP023965.1\|WP_098942319.1\|2193110_2194139_+\|cell-division-protein-ZipA	unknown	unknown	gnl\|CDD\|235124
NZ_CP023965.1\|WP_098942322.1\|2198019_2198460_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP023965.1\|WP_098942320.1\|2194194_2196222_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP023965.1\|WP_088495075.1\|2192116_2192887_-\|sulfate-transporter-CysZ	unknown	unknown	gnl\|CDD\|179898
NZ_CP023965.1\|WP_098942327.1\|2211886_2212663_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP023965.1\|WP_098942317.1\|2190284_2191238_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_CP023965.1\|WP_006533407.1\|2189695_2189953_-\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP023965.1\|WP_192940864.1\|2191422_2192004_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023965.1\|WP_088495080.1\|2204469_2204772_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP023965.1\|WP_138158012.1\|2205366_2206323_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP023965.1\|WP_098942326.1\|2210978_2211782_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP023965.1\|WP_098942323.1\|2199791_2201210_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP023965.1\|WP_098942321.1\|2196450_2197635_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP023965.1\|WP_098942325.1\|2207826_2210106_-\|thiosulfate-reductase-PhsA	unknown	unknown	gnl\|CDD\|237973
NZ_CP023965.1\|WP_098942329.1\|2215432_2215696_+\|immunity-protein	unknown	unknown	unknown
NZ_CP023965.1\|WP_023581663.1\|2207233_2207812_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP023965.1\|WP_098942328.1\|2213549_2215433_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367536

Protein	Function_ID	Function_description	E-value
NZ_CP023965.1\|WP_075670540.1\|2206457_2207237_-\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	3.39919e-142
NZ_CP023965.1\|WP_098944060.1\|2198643_2199396_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	2.05808e-80
NZ_CP023965.1\|WP_023581656.1\|2197801_2198017_+\|DUF3820-family-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.01036e-33
NZ_CP023965.1\|WP_098942319.1\|2193110_2194139_+\|cell-division-protein-ZipA	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	1.05648e-137
NZ_CP023965.1\|WP_098942322.1\|2198019_2198460_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.21799e-15
NZ_CP023965.1\|WP_098942320.1\|2194194_2196222_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP023965.1\|WP_088495075.1\|2192116_2192887_-\|sulfate-transporter-CysZ	gnl\|CDD\|179898	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated.	2.47456e-144
NZ_CP023965.1\|WP_098942327.1\|2211886_2212663_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.91947e-30
NZ_CP023965.1\|WP_098942317.1\|2190284_2191238_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	9.98247e-174
NZ_CP023965.1\|WP_006533407.1\|2189695_2189953_-\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	1.73301e-41
NZ_CP023965.1\|WP_088495080.1\|2204469_2204772_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.82342e-11
NZ_CP023965.1\|WP_138158012.1\|2205366_2206323_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	2.38807e-69
NZ_CP023965.1\|WP_098942326.1\|2210978_2211782_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	2.93006e-20
NZ_CP023965.1\|WP_098942323.1\|2199791_2201210_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP023965.1\|WP_098942321.1\|2196450_2197635_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	6.38658e-148
NZ_CP023965.1\|WP_098942325.1\|2207826_2210106_-\|thiosulfate-reductase-PhsA	gnl\|CDD\|237973	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional.	0
NZ_CP023965.1\|WP_023581663.1\|2207233_2207812_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	3.28934e-76
NZ_CP023965.1\|WP_098942328.1\|2213549_2215433_+\|hypothetical-protein	gnl\|CDD\|367536	pfam03515, Cloacin, Colicin-like bacteriocin tRNase domain. The C-terminal region of colicin-like bacteriocins is either a pore-forming or an endonuclease-like domain. Cloacin and Pyocins have similar structures and activities to the colicins from E coli and the klebicins from Klebsiella spp. Colicins E5 and D cleave the anticodon loops of distinct tRNAs of Escherichia coli both in vivo and in vitro. The full-length molecule has an N-terminal translocation domain and a middle, double alpha-helical region which is receptor-binding.	1.01238e-17

>NZ_CP023965.1|WP_098944060.1|2198643_2199396_+|SDR-family-oxidoreductase
MDYFKDKVILVTGASTGVGEGIAQLLFQRGATVFITGRHLEEITKTARSIDITGKKVIALQADMTSFSQVEKMIETIIAQVGALHGLVNNAGITGPHNTSIVDYEIEDWKSVIDTDINGVFYGLKYGIPAILKSGGGSIVNLSSSNGIVGIAGISAYTAAKHAVLGITRSAALEFADKGIRINAIGPGYVDTPKMQMLPDEVREWMANTHPMKRMATREEVAKTVAFLLSDESSFSTGAFYAIDGGYTAQ
>NZ_CP023965.1|WP_098942322.1|2198019_2198460_-|MarR-family-transcriptional-regulator
MEKCELENALSLLQCTLVAQRTRYTPEQVTWGQYDILELLRLRGDLTPSQLSDSLAISRQNLSKFMRGLKSLGFIAQYRSEKDKRELITHLTDEGHAFLARAALGRKQNAEKISECLTLGEQTLFIELSQKIISALTPDKSAMDND
>NZ_CP023965.1|WP_023581656.1|2197801_2198017_+|DUF3820-family-protein
MLEKQHLIDIANTQMPFGKYKGRMLVDLPEEYLLWFAKKGEFPEGKLGQLMEMTLAIKIEGLEGLLKPLKR
>NZ_CP023965.1|WP_098942321.1|2196450_2197635_+|NupC/NupG-family-nucleoside-CNT-transporter
MSSIIHFVLALAVIGALAFVASNNRKGIRLRYIVQLLVIEIALAWFFLNSDVGEGFVRGFAGLFDHLLGYAAQGTEFVFGGMMKGGLAFFFLNVLCPIIFISALIGILQHIKVLPFVIRIIGTVLSKVNGMGKLESFNAVSSLVLGQSENFIAYKDVLSKMSQRRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSVINPYSVENEEEIQMGNLHEGQSFFEMLGEYILAGFKVALIVAAMLIGFIALIAAVNAIFSMIFGISFQDCLGYVFYPLAWVIGVPEQDALRVGSVMATKLVSNEFVAMGSLQGIAAEISPRSVGILSVFLVSFANFSSIGIVAGAIKGLNEVQGNVVSRFGLKLLFGSTLVSFLSAAIAGLFV
>NZ_CP023965.1|WP_098942320.1|2194194_2196222_+|NAD-dependent-DNA-ligase-LigA
MNKNTQQKIDKLRVTLRHHEYLYHVMDAPEIPDAEYDRLMNELKALEAEHPELITSDSPTQRVGALPLTAFEQVRHEIPMLSLDNAFDETSYLAFDKRLRDRLKNSEEITFCCELKLDGLAVSLLYENGVLVQAATRGDGTTGENITENVRTIKAIPLRLYGEDIPARIEIRGEVFMNEKGFEYLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPTSHYERLQQFKKWGLPVSDAVKLCTGSKAVLDFYHHVEEIRSNLGFDIDGVVIKVDDIALQEELGFVSRAPRWAIAYKFQAQEQMTIIKDVEFQVGRTGAITPVARLEPVQVAGVVVSNATLHNADEIERLGIRIGDTVVIRRAGDVIPQVVSVIEEKRPNDAQEIIFPTHCPICDSDVERIEGEAVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLDEKILSGLERMGEKSAKKLITALDKAKSTSFARFIYALGIREVGEATASGLTTHFSTLDALRNADVEALKSVPDVGDVVAKHVVNFFQEEHNRTVIDQLINDAGITWQAPVIVTHEEGDNPFAGKTVVLTGSLSQLTRDEAKDRLAALGAKVSGSVSKKTDMVIAGEAAGSKLVKANELGITVIDEDEMIRLLDQSK
>NZ_CP023965.1|WP_098942319.1|2193110_2194139_+|cell-division-protein-ZipA
MMQQNLRLILIVVGAILIIALLLHGLWIGRKERSKLFRNRPVKRQKQNYQSDENDDEPQYAEASHQTSTLSSTEKRESEPPIKSESLHEPKISEADRDPLMSETQTKGNSHDTSLQQEPSLGVFDVIEKEPVPIVRDEPKQAPVVNVASEIKSHVNTVSPSASFEPSISETTAHMTPVETEALHHAPAEEPIAESAPQATEAEKELVIVLNVSAHHGQMLDGEALMQSIIQAGFQFGEMNIFHRHLNPTANGPVLFSLANMVKPGTFNIDTMAELTTPGVSMFMMVPSYGDANQNFKLMLLTAQRIASDVGGVVLDDERKLLTPQKIELYKSRIRRTLDLNQ
>NZ_CP023965.1|WP_088495075.1|2192116_2192887_-|sulfate-transporter-CysZ
MTNLTETNKNLNGFHYFALGWRLITRKGLKRFVILPLLANIIILGSAFWWLYGQIGGMVNWMMEKVPDWLQWLSYLIWPLSVIFILLVFTYFFSTLANIIASPFNGLLAEKLEGQITGIAPPDTGVAGILKDVPRILKRELTKIAYYLPRAIVLLLLYFIPAIGQTVAPVLWFAFGAWMMAIQYNDFPFDNHKISFAAMKSSLKQDKWNNLQFGMVINIFTMIPILNLVIMPVAICGATAMWCDRYRKQHVQDGQW
>NZ_CP023965.1|WP_192940864.1|2191422_2192004_+|hypothetical-protein
MADNLFLTTFITNTGVIMETIEELISALELAVPELDAQALRENLPESDAQDDVLNWLYESLSAQGLMDYVEWTEYFGDIPNLKSLEHISLPESPSALILSQVENIDWDEVSVDPYMLPYELPYLEYINHFLTEKGLRLVDLTPFENAYIFCIRDDEEIMEKLDGALNIFEMGINEREPMDKEETKDYIRSLIE
>NZ_CP023965.1|WP_098942317.1|2190284_2191238_-|cysteine-synthase-A
MSKIFEDNSQTIGHTPLIRLKHFGNGNILAKVESRNPSFSVKCRIGANMIWDAEKKGILKEGVELVEPTSGNTGIALAYVAAARGYKLTLTMPDTMSVERRKLLKALGANLVLTEGAKGMKGAIDKANEIRDSDPKRYLLLQQFSNPANPEIHEKTTGPEIWNDTDGEVAAVIAGVGTGGTITGIGRYLKKTQGKAVTMVAVEPTGSPVITQALAGEEIKPGPHKIQGIGAGFIPENLDLSLLDRVIQISNEEAFDTARELMTKEGILAGISSGAAIAAAVKLAKEPEFANKEIVVILPSSGERYLSTPLFADISDS
>NZ_CP023965.1|WP_006533407.1|2189695_2189953_-|phosphocarrier-protein-Hpr
MYQQEVTITAPNGLHTRPAAQFVKEAKTFSSDITLISSGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEKQAVEALVKLMAELE
>NZ_CP023965.1|WP_098942323.1|2199791_2201210_-|glutamate--tRNA-ligase
MSKIKTRFAPSPTGYLHVGGARTALYSWLYSRHNKGEFVLRIEDTDLERSTQPAIDAIMDGMNWLNLNWDEGPYYQTKRFDRYNQVIDQMLSAGTAYRCYCSKERLEQLREDQMAKGEKPRYDGCCRGGNHNHSADEPHVVRFLNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSKRYNAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTIDEMIEHFTLEAISKSASAFNTDKLLWLNHHYINTLPAEKVAVHLDWHIKQQNIDTSNGPSLVELIKLLGERCKTLKEMAESCHYFYVDFDTFEETAAKKHLRPVARQPLEVVRDKLSAITEWTAENVHQAIQDTANELEVGMGKVGMPLRVAVTGAGQSPGLDVTVHAIGKTRSVARINKALDFITERENQA
>NZ_CP023965.1|WP_088495080.1|2204469_2204772_+|helix-turn-helix-transcriptional-regulator
MSSKYPVAYAVGQKIKSLRKSQGYTVFQLAKEIDISEQQLFRYERGVNRIDIDCLVRVLEVLGVNIGSFFEEVTGGMTQETERNEQHIPAHFDSKALSIF
>NZ_CP023965.1|WP_138158012.1|2205366_2206323_-|ABC-transporter-substrate-binding-protein
MYSQRPSSLYTILYNERVATSWNAQNAILAMLGAGDKIVSTTDLVKTIPFFTEIVPAIKTASISSKGNNDTLNIETLIVSQPQIFFATGKLSDAQMTALKNARISVALLKSGSMDALLERTLITGEILGSSSHQLAKDYLAYFQRNKELVKNAVNEISTYKPMKVYHAFGSPLRTSGAPSLNHDWITLAGGVNVAEHWFDNVPSRAGDVSLEQVIHANPDVIVTMYARDTEIIKNTPEWQSITAVREGRVYTNPKGLFWWCRETTEEALQFLWLATVLYPEQTKHIDISKETQQFYKTFFNITLTDQQLKHILKPLKD
>NZ_CP023965.1|WP_075670540.1|2206457_2207237_-|thiosulfate-reductase-cytochrome-B-subunit
MTSIWGAELHYTPDYWPVWLMAAGLLIVAMIAVLVIHGLLRYALAPKHSGHYEEERVYLYSKAIRFWHWGNALLFILLLLSGFLGHFSIGNVTSMVLLHKICGFVLIAFWIGFILINLTTSNGVHYKVRFSGLIGRCIKQARFYLYGIMKGEPHPFAATETDKFNPLQQLAYLGVMFGLVPLLLVTGLLCLYPEVLGEGYWMLKAHLVLGIVALMFICAHFYLCTLGDTFTQTFRSMIDGHHRHQKHDDHSSVTEKTEH
>NZ_CP023965.1|WP_023581663.1|2207233_2207812_-|4Fe-4S-dicluster-domain-containing-protein
MNNNDKQFVMLHDEKRCIGCQACTVACKVINDIPEGFSRLQVQIQGPHDDEAGNPHYQFFRVSCQHCEDAPCVSVCPTGASFIDENGIVQVKKELCIGCDYCVGACPYHVRYINPMTHIADKCNFCSDTRLAEGELPACVSVCPTDALAFGRIDSPEIQAWIKQKSVYQYQLDNVGKPSLFRRKEIHQGDKA
>NZ_CP023965.1|WP_098942325.1|2207826_2210106_-|thiosulfate-reductase-PhsA
MSISRRSFIKGMGIGCVGCTVSSLPPGALAFNPVDSLKGQSKLTPSLCEMCSYRCPIEAQVVNNKTVFIQGNRNAEHQSSRVCARGGSGVSLVNDPNRIVKPMKHKGPRGAGEWEVISWEQAYKEIAEKMNTIKQNYGAESISFSSKSGSLSSHLFHLAAAFGSPNTFTHASTCPAGKAIAASVMMGGDLKMDLANSKYILSFGHNLYEGIEVAETHELMTAQERGAKLVSFDPRLSVVSSKADEWFAIRPGGDLPVLMAMCHILIKEDLYDKAFIEKFTVGFPQLKEVLQDTTPEWAQAHSDVPAKDIVRITREIAAKAPHALIMPGHRATFNKEEINMRRMIFTFNALLGNIEREGGMYQKKAATKYNKLAGINVAPELAKPSVKGMPEITAKRIDATAPQFKYINKGGGIVQSIIDSTLEGVPYQTRAWIMSRHNPFQTVSCRPDLEKAAQKLDLIVSCDVYLSESAAYADYLLPECTYLERDEEVADVSGLNPAYALRQQVVEPIGDTKPSWLIWMELGKALGLEACFPWENMGVRQLYQVNGSEELYKEMHKKGYISYGIPLLLREPSYVKAFVEQYPDAIKHVDSNNTMEKALSFKSPSGLIEIYSEELESRLENYGIPRFHNFPLKEKDELYFIQGKVAVHTNGATQYVPLLAELMWENPVWLHPETAKNHGIKHGDEIILENSIGKEKAHALITEGIRPDTVFVYMGSGAKAGARTAATTTGVHCGNLLPHEISPVSGTDVHTSGVRISRA
>NZ_CP023965.1|WP_098942326.1|2210978_2211782_-|sulfite-exporter-TauE/SafE-family-protein
MTLWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWGIDSLPAEHAMQIAVATSALIMLFSATVTTIKHHKAKRLDWNIMSILFMGIAFGGILGALLALTVEGTWIKWIFIGYLFVTILDCYFRSGFMAPTHNSKTVTKAKESINGTVIGIIAAFLGVGGSVMTVPLLRRRGTPMAQSAAMANALTLPLALTATFTYVALSFTSPLNSESGFIGYIWLKAALILICSTWVGLKISERFLSRIPDKWHARVYPLLLSLVLIVMLF
>NZ_CP023965.1|WP_098942327.1|2211886_2212663_+|helix-turn-helix-transcriptional-regulator
MRNIDINSVDDLPRDILALGSDYPYDTLLEAHHHRRAQFLYAPSGVMKVKTEDGQWIVLPYSGVWIPAEKVHQVLMLGSSTYSLYIEPNKIPRYSEYCEVLQVSPLLHQLLLSANELPLLYDLGGRDSALLALLCHELSQAKPLPYFTPLPQHALLDELCTEFMSRPNIRTTPEMWAEKLNKSLRTFTRLFHKETGLSFRDWRQKACLMYALTALKKGDSVTEVALELGYENPSAFSAMFNKEMGYSPKLFLKRLKEF
>NZ_CP023965.1|WP_098942328.1|2213549_2215433_+|hypothetical-protein
MSDNEDRDIRIEITDGVNSHDYDDYDEDDNSNYTDNDNEDRDRNERERDIQDASDIDLNQYPEKLVMASAGLPALGFLTYQGVLSFTSTPFVSANIKSVFSKSLTALRASALEAISIAPKLARVTGVGIAIEGLWPSSNIMSTQAEMALLGKYGILDRDIFDRNKSRKVTTMPADIVTNQISNIGKKTSLSIHTQVMSALDKNTGKQRTIVSTGQAISIPIVKATATSTPNVYTAPIIAGAKSVRISVSENKVDKNKQVVINSKPNARYYIPSSKLKTHHAIVDFGGKHEALYVSIIDVIDINNEKQIVEKEWAEWSTLYPLEAALLELEEAKKRLADIDKQYQAQVAVINKLKATPEGLTLADPVKNPLVYPQKNKQKEALKNIEISFNNKKFLSILLKDGVKSYLGNVVNEAVKENIVSGWQIVLFSALHNRLADQVLAMHTQIEDAKKKLAPILESRKKAEGKKKAAEDKVEDIEKKLGAYGEVNTKGKSSGREFNKDKAGGPIKDLDWKDVKIDRDGVDKVKLHTGRFGESADNKEMIERLEKILRGEIKATDIDKRFYTHEIRELERYRNLGIKDGEVPNNIDEVWNNTHTATLEDYNINERTQPLYTPEAIEAYDKSQEIR
>NZ_CP023965.1|WP_098942329.1|2215432_2215696_+|immunity-protein
MIDVESIYKNESVEDVLLYFAPKTTYPSIDRCYVRYKFEVVEKATLIKTMGKLLQEGKLAKDKKGLTIKGPNWKEPKFVTQKKYGIK

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Crispr_ID: NZ_CP023965_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023965_4

2384952-2385033

Orphan

Consensus_repeat	Method
TACTCGTCATACTTCAAGCTGTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023965_4

>merge|NZ_CP023965|4|2384952-2385033|CRISPRCasFinder
TACTCGTCATACTTCAAGCTGTAGTGTTGTTGGCTACACTCACTCGCACTAGTCACACTACTCGTCATACTTCAAGCCGTAG

>NZ_CP023965|4|4|2384952-2385033|CRISPRCasFinder
TACTCGTCATACTTCAAGCTGTAG	TGTTGTTGGCTACACTCACTCGCACTAGTCACAC
TACTCGTCATACTTCAAGCCGTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023965.1\|WP_036912700.1\|2380487_2381636_+\|flagellar-type-III-secretion-system-protein-FlhB	unknown	unknown	gnl\|CDD\|171522
NZ_CP023965.1\|WP_098942419.1\|2386142_2386553_+\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|180196
NZ_CP023965.1\|WP_098942417.1\|2381628_2383719_+\|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl\|CDD\|235672
NZ_CP023965.1\|WP_098942422.1\|2391465_2392572_+\|flagellar-basal-body-P-ring-protein-FlgI	unknown	unknown	gnl\|CDD\|235399
NZ_CP023965.1\|WP_098942416.1\|2377897_2378950_+\|chemotaxis-response-regulator-protein-glutamate-methylesterase	unknown	unknown	gnl\|CDD\|234828
NZ_CP023965.1\|WP_036935743.1\|2389861_2390644_+\|flagellar-basal-body-rod-protein-FlgG	unknown	unknown	gnl\|CDD\|183687
NZ_CP023965.1\|WP_075673036.1\|2384522_2384822_-\|anti-sigma-28-factor-FlgM	unknown	unknown	gnl\|CDD\|236765
NZ_CP023965.1\|WP_098942415.1\|2375362_2377009_+\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP023965.1\|WP_075673040.1\|2379408_2380065_+\|protein-phosphatase-CheZ	unknown	unknown	gnl\|CDD\|236868
NZ_CP023965.1\|WP_192940922.1\|2377047_2377905_+\|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl\|CDD\|236725
NZ_CP023965.1\|WP_098942420.1\|2386980_2387811_+\|flagellar-hook-assembly-protein-FlgD	unknown	unknown	gnl\|CDD\|235847
NZ_CP023965.1\|WP_088495218.1\|2389086_2389842_+\|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl\|CDD\|183642
NZ_CP023965.1\|WP_088495220.1\|2390707_2391451_+\|flagellar-basal-body-L-ring-protein-FlgH	unknown	unknown	gnl\|CDD\|234700
NZ_CP023965.1\|WP_098942414.1\|2373596_2375303_+\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP023965.1\|WP_098944065.1\|2384068_2384509_-\|flagellar-export-chaperone-FlgN	unknown	unknown	gnl\|CDD\|225952
NZ_CP023965.1\|WP_098942423.1\|2392571_2393558_+\|flagellar-assembly-peptidoglycan-hydrolase-FlgJ	unknown	unknown	gnl\|CDD\|235559
NZ_CP023965.1\|WP_098942421.1\|2387838_2389065_+\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|235557
NZ_CP023965.1\|WP_023581815.1\|2386563_2386968_+\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|235556
NZ_CP023965.1\|WP_098942418.1\|2385276_2385933_-\|flagellar-basal-body-P-ring-formation-protein-FlgA	unknown	unknown	gnl\|CDD\|180794
NZ_CP023965.1\|WP_023581807.1\|2379009_2379399_+\|chemotaxis-response-regulator-CheY	unknown	unknown	gnl\|CDD\|170568

Protein	Function_ID	Function_description	E-value
NZ_CP023965.1\|WP_036912700.1\|2380487_2381636_+\|flagellar-type-III-secretion-system-protein-FlhB	gnl\|CDD\|171522	PRK12468, flhB, flagellar biosynthesis protein FlhB; Reviewed.	0
NZ_CP023965.1\|WP_098942419.1\|2386142_2386553_+\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|180196	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed.	1.65056e-65
NZ_CP023965.1\|WP_098942417.1\|2381628_2383719_+\|flagellar-biosynthesis-protein-FlhA	gnl\|CDD\|235672	PRK06012, flhA, flagellar type III secretion system protein FlhA.	0
NZ_CP023965.1\|WP_098942422.1\|2391465_2392572_+\|flagellar-basal-body-P-ring-protein-FlgI	gnl\|CDD\|235399	PRK05303, flgI, flagellar basal body P-ring protein FlgI.	0
NZ_CP023965.1\|WP_098942416.1\|2377897_2378950_+\|chemotaxis-response-regulator-protein-glutamate-methylesterase	gnl\|CDD\|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	0
NZ_CP023965.1\|WP_036935743.1\|2389861_2390644_+\|flagellar-basal-body-rod-protein-FlgG	gnl\|CDD\|183687	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional.	9.25384e-157
NZ_CP023965.1\|WP_075673036.1\|2384522_2384822_-\|anti-sigma-28-factor-FlgM	gnl\|CDD\|236765	PRK10810, PRK10810, anti-sigma-28 factor FlgM.	3.63935e-37
NZ_CP023965.1\|WP_098942415.1\|2375362_2377009_+\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	6.74799e-154
NZ_CP023965.1\|WP_075673040.1\|2379408_2380065_+\|protein-phosphatase-CheZ	gnl\|CDD\|236868	PRK11166, PRK11166, chemotaxis regulator CheZ; Provisional.	8.55454e-131
NZ_CP023965.1\|WP_192940922.1\|2377047_2377905_+\|protein-glutamate-O-methyltransferase-CheR	gnl\|CDD\|236725	PRK10611, PRK10611, protein-glutamate O-methyltransferase CheR.	0
NZ_CP023965.1\|WP_098942420.1\|2386980_2387811_+\|flagellar-hook-assembly-protein-FlgD	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	1.65396e-68
NZ_CP023965.1\|WP_088495218.1\|2389086_2389842_+\|flagellar-basal-body-rod-protein-FlgF	gnl\|CDD\|183642	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed.	1.77605e-118
NZ_CP023965.1\|WP_088495220.1\|2390707_2391451_+\|flagellar-basal-body-L-ring-protein-FlgH	gnl\|CDD\|234700	PRK00249, flgH, flagellar basal body L-ring protein FlgH.	1.5333e-102
NZ_CP023965.1\|WP_098942414.1\|2373596_2375303_+\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	0
NZ_CP023965.1\|WP_098944065.1\|2384068_2384509_-\|flagellar-export-chaperone-FlgN	gnl\|CDD\|225952	COG3418, COG3418, Flagellar biosynthesis/type III secretory pathway chaperone [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones].	1.10937e-27
NZ_CP023965.1\|WP_098942423.1\|2392571_2393558_+\|flagellar-assembly-peptidoglycan-hydrolase-FlgJ	gnl\|CDD\|235559	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ.	3.34443e-156
NZ_CP023965.1\|WP_098942421.1\|2387838_2389065_+\|flagellar-hook-protein-FlgE	gnl\|CDD\|235557	PRK05682, flgE, flagellar hook protein FlgE; Validated.	3.15886e-160
NZ_CP023965.1\|WP_023581815.1\|2386563_2386968_+\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	6.64551e-77
NZ_CP023965.1\|WP_098942418.1\|2385276_2385933_-\|flagellar-basal-body-P-ring-formation-protein-FlgA	gnl\|CDD\|180794	PRK07018, flgA, flagellar basal body P-ring formation protein FlgA.	8.26925e-40
NZ_CP023965.1\|WP_023581807.1\|2379009_2379399_+\|chemotaxis-response-regulator-CheY	gnl\|CDD\|170568	PRK10610, PRK10610, chemotaxis protein CheY.	9.22159e-75

>NZ_CP023965.1|WP_075673036.1|2384522_2384822_-|anti-sigma-28-factor-FlgM
MSIERANPLLPINAIAQRNPGEVTQGSRKSGTTEQKTATGDTSVKLSEAQKKLVQPGNKDIDVEKVARLKEAIANGTLTMDSGKIADALFREAAESITQ
>NZ_CP023965.1|WP_098944065.1|2384068_2384509_-|flagellar-export-chaperone-FlgN
MMEELRQTLDLQLSQLNTIAGILRAEQQLLCAGNIDINALHEVTEQKNFVLSALGHTDQQRHTLSLQAGVEKPYTGLPFLSDLWTQIIDITAELKYLNQHNGLLLDQHIARNSDAIRFLQKNHSPTLYGSDGQAQRSTLAGRKIQV
>NZ_CP023965.1|WP_098942417.1|2381628_2383719_+|flagellar-biosynthesis-protein-FlhA
MANLASLLRLPGNWKSSQWQILAGPVLILLILSMMVLPLPPFLLDLLFTFNIALSIMVLLVAMFTRRTLDFAAFPTILLFTTLLRLSLNVASTRIILMEGHTGPEAAGRVVEAFGHFLVGGNFAIGIVVFIILILINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGIINEDEAKKRRKEVSLESDFYGSMDGASKFVRGDAIAGLMILVINVVGGLIVGVAQHGMALNDAATTYTLLTIGDGLVAQIPALIISTAAGVIVTRVATDEDVGQQMVTQLFDNPRVLLLTAGVLGLLGLVPGMPNFVFLFFTAALGGLGWYILRRNANPEVQQQKEMEEVEKQNRVVEASWEDVQLEDPLAMEVGYRLIPMVDNRQNGELLGRISGIRKKFAQETGYLPPVVHIRDNMELRPSSYRILMKGVEIGHGEAHPGRWLAINPGNAVGSLEGDITQEPAFGLPAVWIDDSLREQAQVQGYTVVAASTVIATHFNHVLAKYASELFGRQEAQMLFDRVSKELPKMTENMIPDMLSLTVLHKVLQNLLSEQVPIRDMRTILEALAEHAPEQKDPAELTAVVRVALRRAITQHWFGDQDEIQVIGLDASLERILVQAMQSGGGLEPGLAENIEQQAADAVRHQEMSGGAPVLLVNHTLRSLLSRFLRRSLPQLAVLSNMEVSEGRRIRMTSMIGGQPH
>NZ_CP023965.1|WP_036912700.1|2380487_2381636_+|flagellar-type-III-secretion-system-protein-FlhB
MAEDSDLEKTEDPTPHKREKAKKDGQIVRSKELSSVLMILGGVSLLWMSGGFITRGLHAMLTEGFTFNHHLIGNENLLIPRFGSLIKQAVFALSPVFLGLVLVAIGGSALLGGINFSSKSIKFDPKKWNPISGLKRIFSMNALAELFKAILKSTFVGIAATVFLWHNWNDILHLITLPPLSALANAMQLLIFAVYITVFMLIPMVAFDIIFQIRSHLKKLRMTRQEIKDEFKQQEGDPQLKARIRQQQHAMSRRRMMADVPKADVIVTNPTHYAVALQYNDKMTAPKVLAKGAGAIALKIKEIGAENRIPLLEAPPLARALYRHSEIGHAIPSTLYAAVAEVLAWVYQLKRWKTEGGLKPKQPMNLPVPPALDFAGEDNRHG
>NZ_CP023965.1|WP_075673040.1|2379408_2380065_+|protein-phosphatase-CheZ
MSGNPIMPKDNIEMTSDIISRIGQLTRMLRDSLRELGLDKAIAEAAEAIPDARERLDYVAQMTAQAAERTLNCVEAAQPKQDALSSDATKLTERWDQWFEQPEELKDVRSLVTDTRNYLRDIPESTAFTNSQLLEIMMAQDFQDLTGQVIKRMMSVVQEIEKQLVMVLMENLPPEQLEKSNVKKETDSLLNGPQVNKNNAGVIKNQDQVDDLLESLGF
>NZ_CP023965.1|WP_023581807.1|2379009_2379399_+|chemotaxis-response-regulator-CheY
MASKDLKFLVVDDFSTMRRIVRNLLKELGFTNVEEAEDGADALAKLRNSAIDFVITDWNMPNMDGLELLKNIRSDAGLAATPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAAILEEKLNKIFEKLGI
>NZ_CP023965.1|WP_098942416.1|2377897_2378950_+|chemotaxis-response-regulator-protein-glutamate-methylesterase
MNKITVLCVDDSALMRQIMREIINSHSDMEVVDCAPDPIVARDLIKKYNPQVLTLDVEMPRMDGIDFLEKLMRLRPMPVVMVSSLTAKGSEVTLKALELGAVDFVTKPQLGLREGMMAYSELIAEKIRAAALARINRREVQATPSKSLSFTPMISSEKLIAVGASTGGTEAIRNFLEPLPITSPAILITQHMPAGFTHSFAERLNRLCQISVKEAEDGERVLPGHAYIAPGDYHMELRRNGANYQIHINKEPAVNRHRPSVDVLFRSVAKYAGRNAIGVILTGMGSDGAAGLLEMRRAGSYTFAQDEASCVVFGMPRAAVELGAVDEVKSISAMSKAVLMKISSTQSLRI
>NZ_CP023965.1|WP_192940922.1|2377047_2377905_+|protein-glutamate-O-methyltransferase-CheR
MAAQPLDIFTQRFMLSDDQFQSICQLIYQKAGIVLTNNKREMVYNRLTRRLRELRMNNFGDYLAFLKSDIRNPEWQEFVNALTTNLTAFFREAHHFPILAKHARKRAGGVYRVWCAAASTGEEPYSIAMTLRDVFGNNPYKTKIIASDIDTNVLDKARKGVYRQEELKTLNDEYLKKYFLKGVGDFEGYVKIRQQISEMVSFQYLNLLDKQWDLEGSFDAIFCRNVMIYFDKATQQTLLNRFTSLLKPDGMLFVGHSENVSQLSKDFYLHGHTVYGLTPARRGYE
>NZ_CP023965.1|WP_098942415.1|2375362_2377009_+|Tar-ligand-binding-domain-containing-protein
MFRFRKLKISTSLYLLLMMFCVMQVISSGISLGIVHLNNEQITRVDIDTSKRDELGLSWASLIQTRNAINRVAIAVKTEQSTDYIQSIESIALSRLETANTHFQNFLADINKEAIPTEEKEIVEAVKNDYHVLYGALTELHSMLKNDNFQGFLDQPTERYQTAMENSFNTYMNYVQTEITESIEQGHRSYTIAILMFIGAIAMVIVVSIAAHRWLNFNIIKPFASLSRYFNDVATGKLNREILVFTDDEIGDVFRRLRDMRGELARSIRIVRDNSHAMYSGIQEISKGNTDLSSRTEQQAASLEETAASMEELTATVKQNADNALQASKLAESASETAIRGGKITHSVVETMDAITQSSQKIGAIISVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAGEVRNLAQRSADAAKEIKLLIDESVLRVSQGSQLVNNAGQTMEELVTSVNKVTELMAEIASASDEQSRGIHQVADAVSQMDQVTQQNAALVEQSASAAAALEDQANNLVDAVSAFELPDTDESNSSSSLEGNGLKKADKKSFFKKTH
>NZ_CP023965.1|WP_098942414.1|2373596_2375303_+|Tar-ligand-binding-domain-containing-protein
MFSRMKIVTGLLSILLLFGVLQFISGGVFYSNIVETRSDLNKTLTIQDQRERLDESWANLLQARNNINRAAISFLLQDKNLNVDDSLSVDYLTGLARKNMSRADEKFKEFEQNITAYQVHSEDNVRSLKGRFIEYYSALNQLEILLQDKNLKDFFEQPTTGYQDAFYKEYLAYVMRNEKFNEELNVALEASHQRTVITMVVLAIIVISALILCWFALRNALIRPLNSLLLSIKTFSEGDLRPNIEVNGRNEMSLLANGLKHMQQELIQTVRGVYQSTENIYNSTSEIAAGNNDLSARTEEQVASLEETAASMEQLTATVKQNADNARQASNLANDASDIARQGGKVVANVVQTMHDIAGSSQKITDITAVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRNLAQRSAEAAKEIKTLIEDSVSRTETGSVLVESAGETMTRIVDSVTRVTDIMGEIASASDEQSRGISQVGLAVSEMDRVTQQNASLVEQSAAAAAGLEDQAVALTRLVSIFKLPGQEEKTLERKESDATPVVKAAAPLIKPGTSEKKKSSSVEDPANWETF
>NZ_CP023965.1|WP_098942418.1|2385276_2385933_-|flagellar-basal-body-P-ring-formation-protein-FlgA
MLVRTLIGLFSFFFMVNVSVAKSLPEELQDFFVALHQQGDKVTVTVLTPEDKWPVCQTQEIQRHAGARNWGRLSIPIQCDKQRRFIQIDVSVNGKYLIAKKDINRDDIIETSAVSMATGELEKLPYDVLRDPALIKNAIAMRQISAGKPLTSTMVRRPWAILAGQTVTVFAQGPHFQIRYEGKAVNNAVANETIRVRVKSGQIVTGEALENGSVRIPL
>NZ_CP023965.1|WP_098942419.1|2386142_2386553_+|flagellar-basal-body-rod-protein-FlgB
MLDKLENTFHFQQEALSIRNKRQEILAANIANADTPGFQARDIDFASELKKTIENGRSGTHGMQLAMTSERHIPIKPGYRLEADLLYRVPHQTAMDGNTVDMDMERSNFADNSLKYQADVTFINSQVKSMMAVLQQ
>NZ_CP023965.1|WP_023581815.1|2386563_2386968_+|flagellar-basal-body-rod-protein-FlgC
MSLFSIFDISSSALSAQSQRLNVSASNMANADSVAGPDGDPYRAKQVVFQVNAPAGQEIGGVRVTEVVDDPAPFRMEYQPGHPFADEKGYVRMPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTLMIGQ
>NZ_CP023965.1|WP_098942420.1|2386980_2387811_+|flagellar-hook-assembly-protein-FlgD
MGISSSMIEPYDNTIIGDAPSSYHTKKSGSDDIKGNFLTLLITQMKNQDPTNPMQNNELTSQLAQISTVEGIETLNKTVNNIVGQIDQSQALKASSLVGRGVMVSGNKIVVFQPTDGKGETEKPGDGDETIPTPDTQNEKTRQQMGTYKADGTDQNTPDSEHLFSTPFGFELLSPTDSLTINITNASGVTVRTINMDKKMLPDVYNFSWDCTDEDDNPVPPGSYKFTVNATLNDAQVPVKTLNYALVNSVSMVDGGARLDVGLGNTVSLDEIRQVL
>NZ_CP023965.1|WP_098942421.1|2387838_2389065_+|flagellar-hook-protein-FlgE
MSFSQAVSGLNAAAANLDTIGNNISNSATYGFKGANVSFADVFAGSGAGLGVKVAGISQNFKDGSITTTNRPTDVAISGGGFFRIEDQNGGVFYSRNGEFGKNKDGFLTNMQGMRVTGYPVQVVDGKNVVQKGATPTPIVIPTDMMNASATDKINMAVNLNSGEEKPTKTPFDSKDGDTYNFSTNVTTYDSLGNEHNLNLFFVKTNDNEWKVYGQDTSTKTAGGAPTPHQDLGTLKYTNAGVLDSYTKTDMNIASLNGSAAGTIELDFTGSTQQKVSESSVSKLAQNGYQAGEFTNFRIEQDGSIMATYSNQQSQVVGQIALANFANAGGLSSQGDNMWSETNGSGSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLVSLR
>NZ_CP023965.1|WP_088495218.1|2389086_2389842_+|flagellar-basal-body-rod-protein-FlgF
MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAVPVNGDTLPTRTLTVASTPGSDQSQGTMNYTGRSMDVALSDNGYLAVQLEDGTEAYTRNGNIQRNADGMLMVQGRLLMGDNGAIEVPAQANVSIANNGIVTAHVPTDPPKMLGQIGRLKMVKPEQNDLVRGDDGLFHLSQQGTVRAGEQLPADDSVKVLAGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLLSLS
>NZ_CP023965.1|WP_036935743.1|2389861_2390644_+|flagellar-basal-body-rod-protein-FlgG
MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMTSEQTNAPSGLQIGTGVRPVATERLHSQGNLAQTNGTRDVAIKGQGFFHVQLPDGTDAYTRDGSFQMDQNGQLVTTSGFQVVPAIILPETAKKVMIGRDGTVSVEIEGSPAPQQVGQLTLTTFINDSGLESVGENLYLETASSGAPTENAPGINGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQL
>NZ_CP023965.1|WP_088495220.1|2390707_2391451_+|flagellar-basal-body-L-ring-protein-FlgH
MDTKVITDNSGARKLSVRWRRHQRLGTALLVLTLSGCAYIPKKPLVEGNTTAVPTAPTAPAPNGSIFQATQPVYFGYQPLFEDRRPRNIGDTLTITLQENVSASKNSSANASRNGKAGFLAAITPGFLEGVFGNKRTDMSMEGNSDFGGKGGANANNTFKGTITVTVDQLLANGNLHVIGEKQIAINQGTEFIRFSGVVNPRTISGTNTVNSTQVADARIEYIGDGYINEAQSMGWLQRFFLNVSPF
>NZ_CP023965.1|WP_098942422.1|2391465_2392572_+|flagellar-basal-body-P-ring-protein-FlgI
MKKIAMSLFFIVMTCVGFSAHAERIRDLTSVEGVRENALIGYGLVVGLDGTGDQTMQTPFTTQSLNNMLSQLGITVPPGTNMQLKNVAAVMVTAKLPPFGRTGQSIDVVVSSLGNAKSLRGGTLLMTPLKGVDNQVYALAQGNIIVGGAGASAGGSSVKVNQLAGGRISSGAIIERELPSQFGQTGLLNLQLNEENFTLAQHISDTVNKLRGVGTAIPLDARTVQLRVPIGKSEQVRFLAEVQNLEIKRVVADAKVIINARTGSVVMNRDVTLGSCAIAQGNLSVTVDSQVNVSQPNTPFAGGSTVVTRNTSVNMSEQGGSLQKVNASASLNEVIRTLNALGATPTDLMSILQAMESAGCLRARLEII
>NZ_CP023965.1|WP_098942423.1|2392571_2393558_+|flagellar-assembly-peptidoglycan-hydrolase-FlgJ
MKDLSLLSSMPAMSAPAYDSNALNKLKYQVGQNADQQGLRQVAQQLEGVFVQMMLKSMRDAIPQESMFNSESTKMYTSLYDQQIAQDLSQKGLGFADMIEKQLSAKVTMEPSEMAGKTPMPLDGSDIFQSMPTQALGQIYRAMQPYQNVVESTIGKLKGLSESSASFASKLLGPAKQATEGTGVHHLLVVAQAALESGWGKREILTGDGKPSYNLFGIKAGSSWKGPVTNIMTTEVIDGNSIKMRDNFRVYGSYVEAIQDYLRLITESPRYAKVPQAQTPEQAAYRIQEAGYATDPGYAKKLVSIIGQLKGSGEQVAKTYTHDLSDLF

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NZ_CP042167	Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence	36180-36213	8	0.765
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NZ_CP046610	Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence	105508-105541	8	0.765
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NZ_CP048048	Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence	129466-129499	9	0.735
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NZ_CP027115	Gordonia alkanivorans strain YC-RL2 plasmid pYYC01, complete sequence	30427-30460	9	0.735
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NC_023610	Erwinia phage PhiEaH1, complete genome	11429-11462	9	0.735
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NC_014159	Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence	80681-80714	10	0.706
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	547933-547966	10	0.706
NZ_CP023965_2	2.1\|1235674\|34\|NZ_CP023965\|CRISPRCasFinder	1235674-1235707	34	NC_047905	Streptomyces phage Attoomi, complete genome	36183-36216	10	0.706

1. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NZ_CP042167 (Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
tggacatgggcacggtcacggtcacggccatggc	Protospacer
***  .*** *****************.***

2. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NZ_CP046610 (Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
tggacatgggcacggtcacggtcacggccatggc	Protospacer
***  .*** *****************.***

3. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NZ_CP048048 (Clavibacter michiganensis subsp. capsici strain 1106 plasmid pCM2_1106, complete sequence) position: , mismatch: 9, identity: 0.735

------tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
ccggcctggtcgcggtcacggtcacggtcacggt------	Protospacer
      ***. *.*********************

4. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NZ_CP027115 (Gordonia alkanivorans strain YC-RL2 plasmid pYYC01, complete sequence) position: , mismatch: 9, identity: 0.735

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
cgccggcggtcaccgtcacggtcacggaacttgg	Protospacer
.* ***.****** *************   ** .

5. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NC_023610 (Erwinia phage PhiEaH1, complete genome) position: , mismatch: 9, identity: 0.735

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
tagcggtcgtcacggtcacgttcacgaccacggc	Protospacer
*.***** ************ *****..**.

6. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NC_014159 (Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete sequence) position: , mismatch: 10, identity: 0.706

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
cgtcggtggtcacggtcacggtcgcgggggcgtc	Protospacer
.* ********************.***  .. .

7. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
acgcggtgttcaccgtcacggtcacgccggtttc	Protospacer
  ****** **** ************ . .**.

8. spacer 2.1|1235674|34|NZ_CP023965|CRISPRCasFinder matches to NC_047905 (Streptomyces phage Attoomi, complete genome) position: , mismatch: 10, identity: 0.706

tggcggtggtcacggtcacggtcacggtcattca	CRISPR spacer
agccggtggtcacggtcacggacatggccccctg	Protospacer
 * ****************** **.**.* ....

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2314291 : 2320974

Enterobacteria_phage(33.33%)

lysis,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098942380.1\|2314291_2315029_-	helix-turn-helix transcriptional regulator	A0A088CBP2	Shigella_phage	1.8e-57	46.3
WP_098942381.1\|2315267_2316083_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.7e-56	45.2
WP_075674216.1\|2316446_2316755_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	3.1e-27	55.4
WP_075674215.1\|2316747_2317152_+	structural protein	A0A2I7RXE2	Vibrio_phage	4.5e-26	50.8
WP_098942382.1\|2317148_2317598_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	7.3e-09	31.1
WP_098942383.1\|2317782_2318199_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_098942384.1\|2318262_2319177_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_036912664.1\|2319554_2319734_-	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_098942385.1\|2320431_2320974_+	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	6.5e-20	33.7

DBSCAN-SWA_2

2410229 : 2416755

Proteus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098942432.1\|2410229_2410466_-	excisionase family protein	S4TND0	Salmonella_phage	2.6e-26	63.6
WP_098942433.1\|2410458_2410674_-	hypothetical protein	A0A1P8DTI1	Proteus_phage	5.5e-31	91.5
WP_098942435.1\|2410878_2411481_-	DNA methyltransferase	G8C7S6	Escherichia_phage	4.6e-59	57.1
WP_098942436.1\|2411574_2412186_-	DNA cytosine methyltransferase	A0A2I7R801	Vibrio_phage	6.6e-29	49.7
WP_098942437.1\|2412218_2413094_+	hypothetical protein	NA	NA	NA	NA
WP_098942438.1\|2413283_2415281_+	acyltransferase	W6MVL2	Pseudomonas_phage	8.1e-60	37.6
WP_192940866.1\|2415481_2416498_+	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	1.3e-08	27.3
WP_098942440.1\|2416524_2416755_-	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	2.6e-31	89.5

DBSCAN-SWA_3

3092004 : 3105568

Tupanvirus(55.56%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098943128.1\|3092004_3093987_-	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	A0A2K9KZK0	Tupanvirus	1.1e-21	27.2
WP_098943129.1\|3093986_3094967_-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	A8CG95	Salmonella_phage	2.5e-38	34.4
WP_098943130.1\|3094967_3096113_-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	A0A2K9L470	Tupanvirus	5.9e-39	28.2
WP_098943131.1\|3096246_3096996_-	ATP-binding cassette domain-containing protein	A0A2K9L407	Tupanvirus	7.1e-09	27.2
WP_098943132.1\|3096997_3098008_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_023582381.1\|3098388_3098685_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.2e-13	38.9
WP_098943133.1\|3098689_3101077_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.5e-09	27.4
WP_023582383.1\|3101091_3102075_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.9e-34	37.7
WP_120655563.1\|3102250_3102298_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_006537111.1\|3102405_3102762_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004263702.1\|3102804_3103002_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_036937410.1\|3103096_3103636_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.7e-15	34.4
WP_075673357.1\|3103639_3105568_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.9e-128	37.2

DBSCAN-SWA_4

3177291 : 3231673

Morganella_phage(30.95%)

lysis,head,portal,integrase,protease,terminase,tRNA,tail,capsid

attL 3182315:3182330|attR 3226023:3226038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088495842.1\|3177291_3177690_-	antitermination protein	Q8W638	Enterobacteria_phage	9.2e-32	54.3
WP_098943235.1\|3178226_3178775_-	hypothetical protein	NA	NA	NA	NA
WP_098943237.1\|3178776_3179868_-	hypothetical protein	NA	NA	NA	NA
WP_098943239.1\|3180334_3181360_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	1.3e-85	47.1
WP_098943240.1\|3181356_3182163_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	4.0e-90	62.1
WP_006537200.1\|3182184_3182700_-	hypothetical protein	U5P0A0	Shigella_phage	3.5e-23	44.2
3182315:3182330	attL	NA	NA	NA	NA
WP_098943241.1\|3183242_3183422_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_098943242.1\|3183683_3184160_-	hypothetical protein	A0A1W6JP72	Morganella_phage	7.9e-46	61.1
WP_049217157.1\|3184197_3184392_-	hypothetical protein	H9C161	Pectobacterium_phage	6.5e-15	61.0
WP_049217153.1\|3184495_3185143_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.9e-75	65.1
WP_098943244.1\|3185532_3186057_+	hypothetical protein	A0A1W6JP41	Morganella_phage	1.9e-53	61.0
WP_017628380.1\|3186142_3186394_+	excisionase	NA	NA	NA	NA
WP_098943245.1\|3186368_3187502_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	5.5e-154	72.0
WP_098943246.1\|3188270_3190796_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_098943248.1\|3191611_3192019_+	hypothetical protein	NA	NA	NA	NA
WP_098943250.1\|3192304_3193384_-	hypothetical protein	NA	NA	NA	NA
WP_192940878.1\|3193635_3195306_-	hypothetical protein	A0A1P8DTJ0	Proteus_phage	3.2e-142	55.2
WP_098943252.1\|3195356_3195971_-	hypothetical protein	NA	NA	NA	NA
WP_098943253.1\|3195972_3196341_-	hypothetical protein	NA	NA	NA	NA
WP_098943255.1\|3196334_3199280_-	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	2.2e-186	48.2
WP_098943257.1\|3199280_3199679_-	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	3.7e-33	49.2
WP_075674152.1\|3199733_3200009_-	hypothetical protein	NA	NA	NA	NA
WP_098943259.1\|3200022_3200604_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	6.4e-50	50.0
WP_098943261.1\|3200600_3201200_-	hypothetical protein	S4TSP7	Salmonella_phage	2.1e-56	56.0
WP_098943263.1\|3201200_3204515_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	4.2e-162	39.2
WP_098943265.1\|3204519_3204729_-\|tail	tail assembly chaperone	NA	NA	NA	NA
WP_098943266.1\|3204773_3205124_-\|tail	phage tail protein	Q7Y401	Yersinia_phage	8.1e-16	41.4
WP_006533916.1\|3205123_3205597_-	hypothetical protein	Q6UAX0	Klebsiella_phage	8.1e-59	70.1
WP_098943268.1\|3205608_3206013_-	HK97 gp10 family phage protein	Q7Y404	Yersinia_phage	2.7e-31	56.5
WP_098943270.1\|3206009_3206399_-	hypothetical protein	Q7Y405	Yersinia_phage	1.4e-29	49.2
WP_098943272.1\|3206385_3206712_-\|head	phage head closure protein	Q7Y406	Yersinia_phage	4.4e-16	44.9
WP_098943274.1\|3206711_3207017_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	9.2e-24	56.2
WP_098943276.1\|3207074_3207287_+	hypothetical protein	NA	NA	NA	NA
WP_098943277.1\|3207370_3208579_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.2e-154	68.0
WP_170832166.1\|3208592_3209237_-\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	3.6e-94	79.9
WP_098943279.1\|3209214_3210444_-\|portal	phage portal protein	Q8W629	Enterobacteria_phage	3.8e-177	73.1
WP_098943283.1\|3210632_3212366_-\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	0.0e+00	97.3
WP_072065059.1\|3212369_3212840_-\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	6.3e-72	82.7
WP_098943285.1\|3213053_3213401_-	HNH endonuclease	A0A1P8DTD1	Proteus_phage	1.0e-58	93.9
WP_098943287.1\|3213767_3214487_+	hypothetical protein	NA	NA	NA	NA
WP_098943289.1\|3214615_3215077_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	6.5e-13	36.1
WP_192940879.1\|3215079_3215238_-	hypothetical protein	NA	NA	NA	NA
WP_098943291.1\|3215219_3215690_-	lysozyme	A0A1W6JNW4	Morganella_phage	6.8e-50	59.2
WP_036904926.1\|3215689_3215959_-	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	5.7e-17	47.7
WP_098943293.1\|3216121_3217078_-	hypothetical protein	NA	NA	NA	NA
WP_098943295.1\|3217182_3217839_-	hypothetical protein	A0A1W6JP37	Morganella_phage	3.4e-47	47.2
WP_098943297.1\|3217866_3218892_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	4.1e-84	45.0
WP_098943301.1\|3219106_3219493_-	RusA family crossover junction endodeoxyribonuclease	K7PH72	Enterobacteria_phage	2.9e-30	53.2
WP_098943303.1\|3219565_3220657_-	replication protein	H2DE83	Erwinia_phage	1.1e-29	55.3
WP_098943305.1\|3220669_3220849_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	4.7e-12	55.2
WP_098943307.1\|3220838_3221048_-	hypothetical protein	NA	NA	NA	NA
WP_098943309.1\|3221133_3221592_-	hypothetical protein	A0A1W6JP72	Morganella_phage	2.4e-31	47.5
WP_098943311.1\|3221660_3221873_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.3e-21	66.7
WP_098943313.1\|3221913_3222576_+	helix-turn-helix transcriptional regulator	A0A1R3Y604	Salmonella_virus	3.0e-19	56.7
WP_098943315.1\|3223215_3223746_+	hypothetical protein	A0A1W6JP41	Morganella_phage	8.8e-54	59.8
WP_036894694.1\|3223807_3224050_+	excisionase	NA	NA	NA	NA
WP_098943317.1\|3224030_3225173_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	7.5e-127	60.6
WP_098943319.1\|3225150_3226014_-	DNA adenine methylase	NA	NA	NA	NA
WP_098943321.1\|3226079_3227816_-	AAA family ATPase	NA	NA	NA	NA
3226023:3226038	attR	NA	NA	NA	NA
WP_098943323.1\|3227996_3229250_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.0e-20	90.7
WP_098943325.1\|3229388_3230018_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_098943327.1\|3230010_3230460_+	NUDIX hydrolase	NA	NA	NA	NA
WP_098943329.1\|3230569_3231673_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_5

3348159 : 3385497

Burkholderia_phage(22.86%)

lysis,head,integrase,terminase,tRNA,holin,plate

attL 3377715:3377731|attR 3389592:3389608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049213669.1\|3348159_3348816_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	1.3e-38	40.9
WP_098943476.1\|3348812_3350000_-\|plate	baseplate J/gp47 family protein	Q6IWQ3	Burkholderia_phage	5.7e-69	40.3
WP_098943478.1\|3349992_3350337_-	hypothetical protein	NA	NA	NA	NA
WP_098943480.1\|3350333_3351026_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	4.4e-29	40.6
WP_098943482.1\|3351028_3351844_-	hypothetical protein	A1Z005	Burkholderia_virus	7.0e-10	25.6
WP_098943484.1\|3351809_3352127_-	hypothetical protein	Q6IWP9	Burkholderia_phage	8.7e-09	33.3
WP_098943486.1\|3352126_3352654_-	hypothetical protein	NA	NA	NA	NA
WP_098943488.1\|3352655_3354950_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	7.5e-17	26.2
WP_098943490.1\|3355035_3355494_-	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_098943492.1\|3355534_3355987_-	hypothetical protein	I7ATP4	Escherichia_phage	7.5e-22	38.1
WP_098943494.1\|3355997_3357485_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	2.5e-82	37.5
WP_098943496.1\|3357493_3358009_-	hypothetical protein	NA	NA	NA	NA
WP_098943498.1\|3357995_3358367_-	hypothetical protein	NA	NA	NA	NA
WP_098943500.1\|3358366_3358825_-	hypothetical protein	Q6IWU9	Burkholderia_phage	5.0e-13	35.3
WP_098943502.1\|3358824_3359256_-	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	5.7e-11	31.7
WP_098943504.1\|3359258_3359600_-	hypothetical protein	Q6IWU7	Burkholderia_phage	4.7e-08	36.4
WP_098943506.1\|3359669_3360737_-	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	8.8e-53	39.3
WP_098943508.1\|3360736_3361234_-	hypothetical protein	NA	NA	NA	NA
WP_098943510.1\|3361233_3362493_-	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	2.1e-45	51.3
WP_098944093.1\|3362489_3363215_-\|head	phage head morphogenesis protein	A0A2H5BG15	Pseudoalteromonas_phage	5.1e-36	35.6
WP_098943512.1\|3363252_3364755_-	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	1.9e-101	43.9
WP_098943514.1\|3364759_3366157_-\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	1.8e-82	40.9
WP_098943516.1\|3366440_3366917_-	hypothetical protein	NA	NA	NA	NA
WP_098943518.1\|3367027_3368050_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	2.5e-36	39.8
WP_098943520.1\|3368242_3368647_-	hypothetical protein	NA	NA	NA	NA
WP_098943522.1\|3368653_3368920_-	hypothetical protein	NA	NA	NA	NA
WP_098943524.1\|3369080_3369536_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.1e-23	46.3
WP_098943526.1\|3369532_3369937_-	structural protein	A0A2I7RXE2	Vibrio_phage	2.9e-25	48.7
WP_098944094.1\|3369929_3370277_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_192940882.1\|3370455_3371505_-	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	7.6e-142	71.2
WP_036908152.1\|3371647_3371845_-	TrmB family transcriptional regulator	A0A0P0ZDH6	Stx2-converting_phage	5.4e-09	63.5
WP_098943528.1\|3372007_3372541_-	antiterminator	Q5TJL7	Enterobacteria_phage	2.3e-38	51.3
WP_098943530.1\|3372528_3372840_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	2.9e-33	66.7
WP_098943532.1\|3372851_3373445_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.6e-56	53.7
WP_098943534.1\|3373818_3375348_+	ATP-binding protein	NA	NA	NA	NA
WP_098943536.1\|3375461_3376835_-	replicative DNA helicase	A0A192Y673	Salmonella_phage	1.9e-100	45.4
WP_098943538.1\|3376827_3377421_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	1.9e-44	47.6
WP_098943540.1\|3377413_3378265_-	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	4.0e-32	58.3
3377715:3377731	attL	NA	NA	NA	NA
WP_098943542.1\|3378266_3378491_-	hypothetical protein	H9C163	Pectobacterium_phage	4.0e-16	54.1
WP_098943543.1\|3378508_3378964_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	1.1e-28	54.7
WP_098943545.1\|3379011_3379257_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_098943547.1\|3379362_3380055_+	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	2.4e-51	48.1
WP_098943549.1\|3380455_3380788_+	hypothetical protein	H9C158	Pectobacterium_phage	2.1e-05	39.2
WP_098943551.1\|3380800_3382768_+	hypothetical protein	H9C157	Pectobacterium_phage	2.7e-116	37.8
WP_098943553.1\|3382767_3383268_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	6.1e-41	55.8
WP_098943555.1\|3383315_3383495_+	hypothetical protein	NA	NA	NA	NA
WP_020945461.1\|3383522_3383693_+	hypothetical protein	NA	NA	NA	NA
WP_098943559.1\|3384107_3384320_+	hypothetical protein	NA	NA	NA	NA
WP_098943561.1\|3384321_3385497_+\|integrase	phage integrase SAM-like domain-containing protein	A0A2H4J1K3	uncultured_Caudovirales_phage	1.3e-33	29.7
3389592:3389608	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3420734 : 3476913

Morganella_phage(47.92%)

lysis,head,integrase,terminase,tail

attL 3428442:3428457|attR 3472701:3472716

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098943620.1\|3420734_3424913_-	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	76.0
WP_098943622.1\|3424912_3425479_-\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	3.4e-48	77.4
WP_098943624.1\|3425415_3426135_-	C40 family peptidase	A0A1W6JNU8	Morganella_phage	1.4e-110	74.9
WP_098943626.1\|3426138_3426837_-\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	1.9e-112	82.3
WP_089503235.1\|3426833_3427163_-\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	1.1e-41	69.7
WP_098943628.1\|3427202_3430538_-	tape measure protein	A0A1W6JNU2	Morganella_phage	5.5e-202	45.8
3428442:3428457	attL	NA	NA	NA	NA
WP_098943630.1\|3430606_3430915_-	hypothetical protein	NA	NA	NA	NA
WP_098943632.1\|3430948_3431254_-	hypothetical protein	A0A1P8DTJ8	Proteus_phage	2.5e-05	36.7
WP_192940886.1\|3431390_3431975_-	hypothetical protein	NA	NA	NA	NA
WP_098943636.1\|3432112_3432838_-	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	8.0e-66	56.8
WP_160230142.1\|3433608_3433779_-	hypothetical protein	NA	NA	NA	NA
WP_098943638.1\|3433882_3434695_+	LexA family transcriptional regulator	B0ZSI5	Halomonas_phage	2.4e-10	25.9
WP_098943640.1\|3434719_3435427_+	hypothetical protein	NA	NA	NA	NA
WP_098943642.1\|3435619_3436075_-	hypothetical protein	NA	NA	NA	NA
WP_098943644.1\|3436208_3436673_-	hypothetical protein	NA	NA	NA	NA
WP_098943648.1\|3437757_3438057_+	hypothetical protein	NA	NA	NA	NA
WP_098943649.1\|3438072_3438351_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_098943650.1\|3438372_3439065_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	3.8e-89	69.3
WP_098943651.1\|3439114_3439870_-	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	3.6e-101	76.5
WP_098943652.1\|3439934_3440306_-	hypothetical protein	A0A1W6JNU7	Morganella_phage	1.9e-47	69.9
WP_098943653.1\|3440302_3440671_-	hypothetical protein	A0A1W6JNX7	Morganella_phage	3.3e-52	83.6
WP_098943654.1\|3440673_3441015_-	hypothetical protein	A0A1W6JNW7	Morganella_phage	5.3e-52	81.4
WP_098943655.1\|3441016_3441394_-	hypothetical protein	A0A1W6JP09	Morganella_phage	4.0e-45	72.8
WP_098943656.1\|3441436_3442387_-	hypothetical protein	A0A1W6JNV5	Morganella_phage	5.6e-152	86.2
WP_089503223.1\|3442392_3443079_-	hypothetical protein	A0A1W6JNU9	Morganella_phage	4.3e-69	77.1
WP_098943657.1\|3443145_3444207_-\|head	phage head morphogenesis protein	A0A1W6JNT7	Morganella_phage	4.6e-155	76.2
WP_098943658.1\|3444209_3445592_-	DUF4055 domain-containing protein	A0A1W6JNV0	Morganella_phage	1.4e-215	79.8
WP_098943659.1\|3445593_3447078_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.7e-267	87.9
WP_098943660.1\|3447080_3447683_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	1.2e-75	79.0
WP_098943661.1\|3447747_3448299_+	YfbU family protein	NA	NA	NA	NA
WP_098943662.1\|3448616_3448856_-	hypothetical protein	NA	NA	NA	NA
WP_017628807.1\|3448978_3449404_-	hypothetical protein	NA	NA	NA	NA
WP_192940887.1\|3449603_3449747_-	hypothetical protein	NA	NA	NA	NA
WP_098943663.1\|3450060_3450522_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.5e-22	50.8
WP_004244729.1\|3450524_3450683_-	hypothetical protein	NA	NA	NA	NA
WP_098943664.1\|3450664_3451135_-	lysozyme	A0A1W6JNW4	Morganella_phage	5.2e-50	62.5
WP_098943665.1\|3451134_3451404_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	52.3
WP_098943667.1\|3451895_3452405_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	2.9e-70	73.2
WP_098943668.1\|3452429_3453425_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_098943670.1\|3453525_3453933_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_041701226.1\|3454581_3454794_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.5e-25	78.6
WP_098943671.1\|3455374_3455833_-	Hsp20 family protein	NA	NA	NA	NA
WP_098943672.1\|3456072_3456705_-	antitermination protein	I6PDF8	Cronobacter_phage	2.5e-23	34.3
WP_004245983.1\|3456704_3457061_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_098943673.1\|3457057_3457348_-	DUF1364 domain-containing protein	A0A0M3LQ97	Mannheimia_phage	7.2e-34	70.2
WP_036919942.1\|3457426_3457876_-	YbcN family protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_026090523.1\|3457943_3458273_-	hypothetical protein	A0A1C9LVV9	Vibrio_phage	1.1e-22	39.0
WP_098943674.1\|3458300_3459686_-	AAA family ATPase	Q716D2	Shigella_phage	1.0e-114	47.9
WP_098943675.1\|3459685_3460453_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.4e-23	52.8
WP_192940888.1\|3460449_3460623_-	hypothetical protein	NA	NA	NA	NA
WP_004247478.1\|3460718_3461066_-	hypothetical protein	A0A1W6JNY4	Morganella_phage	8.3e-37	72.9
WP_088495874.1\|3461184_3461370_-	hypothetical protein	A4KWW0	Enterobacteria_phage	3.9e-09	56.7
WP_098943676.1\|3461465_3462176_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	2.8e-79	61.3
WP_088495876.1\|3462184_3462526_+	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	9.6e-38	62.8
WP_098943677.1\|3462681_3462876_-	DUF2767 family protein	NA	NA	NA	NA
WP_098943678.1\|3463321_3463624_+	hypothetical protein	NA	NA	NA	NA
WP_098943679.1\|3463823_3464198_-	hypothetical protein	NA	NA	NA	NA
WP_138158020.1\|3464278_3464503_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	1.8e-08	40.5
WP_098943681.1\|3464591_3464819_+	hypothetical protein	NA	NA	NA	NA
WP_192940889.1\|3464907_3465084_+	hypothetical protein	NA	NA	NA	NA
WP_098943682.1\|3465074_3465350_+	hypothetical protein	NA	NA	NA	NA
WP_164530398.1\|3465346_3465499_+	hypothetical protein	NA	NA	NA	NA
WP_098943683.1\|3465495_3465816_+	hypothetical protein	NA	NA	NA	NA
WP_088495883.1\|3465817_3466429_+	ERF family protein	A0A1W6JP21	Morganella_phage	1.4e-74	69.7
WP_098943684.1\|3466428_3466926_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	2.9e-51	74.8
WP_098944097.1\|3467211_3467565_+	hypothetical protein	NA	NA	NA	NA
WP_098944098.1\|3467601_3467883_+	hypothetical protein	A0A1P8DTG9	Proteus_phage	2.9e-40	81.5
WP_098943685.1\|3467882_3468413_+	hypothetical protein	J9Q748	Salmonella_phage	1.6e-34	45.1
WP_098943686.1\|3468482_3469133_+	hypothetical protein	NA	NA	NA	NA
WP_167394829.1\|3469329_3469506_+	hypothetical protein	NA	NA	NA	NA
WP_098943687.1\|3469498_3469876_+	DUF2591 family protein	A0A075B8G3	Enterobacteria_phage	9.7e-15	42.0
WP_098943688.1\|3469862_3470465_+	DNA methyltransferase	G8C7S6	Escherichia_phage	1.0e-58	57.7
WP_098943689.1\|3470545_3470740_+	hypothetical protein	A0A1P8DTH3	Proteus_phage	8.4e-31	95.3
WP_004244695.1\|3470769_3470976_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	6.7e-10	51.8
WP_098944099.1\|3470979_3472164_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.8e-114	51.6
WP_023581360.1\|3472599_3472929_+	sulfurtransferase TusE	NA	NA	NA	NA
3472701:3472716	attR	NA	NA	NA	NA
WP_098943690.1\|3472972_3473254_-	acylphosphatase	NA	NA	NA	NA
WP_006537351.1\|3473451_3473772_+	heat shock protein HspQ	NA	NA	NA	NA
WP_075673146.1\|3473850_3474264_-	CoA-binding protein	NA	NA	NA	NA
WP_075673145.1\|3474401_3474860_+	methylglyoxal synthase	NA	NA	NA	NA
WP_098943691.1\|3474861_3476913_-	DNA helicase IV	A7KV33	Bacillus_phage	2.3e-17	24.9

DBSCAN-SWA_7

3786503 : 3797382

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098943899.1\|3786503_3787715_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	2.3e-102	47.8
WP_036912266.1\|3787915_3788179_+	YbeD family protein	NA	NA	NA	NA
WP_098943900.1\|3788339_3788984_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_075671558.1\|3789085_3790051_+	lipoyl synthase	NA	NA	NA	NA
WP_023581134.1\|3790064_3790439_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.5e-23	48.0
WP_023581133.1\|3790614_3790824_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	4.5e-22	74.2
WP_098943901.1\|3791021_3791495_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_098943902.1\|3791778_3792003_+	glutaredoxin family protein	V5UN81	Mycobacterium_phage	5.9e-12	45.7
WP_098943903.1\|3792014_3792434_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	4.7e-10	36.8
WP_098943904.1\|3792439_3794566_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	5.4e-203	50.4
WP_098943905.1\|3794590_3795559_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	7.5e-136	73.1
WP_098943906.1\|3796182_3797382_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	2.4e-27	36.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023965

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection