CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023969	Pseudomonas sp. FDAARGOS_380 chromosome, complete genome	27 crisprs	DEDDh,csa3,RT,cas3,DinG	9	5	8	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023969_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_1

7103-7199

Orphan

Consensus_repeat	Method
GCTCCCACAATTGGATCGCGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_1

>merge|NZ_CP023969|1|7103-7199|CRISPRCasFinder
GCTCCCACAATTGGATCGCGGGGGTGTCAGGTAGATAGGCGTCGGCTGTCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTGGATCGCGGGGG

>NZ_CP023969|1|1|7103-7199|CRISPRCasFinder
GCTCCCACAATTGGATCGCGGGGG	TGTCAGGTAGATAGGCGTCGGCTGTCAGGCCGTCATCGCAGGCAAGCCA
GCTCCCACAGTTGGATCGCGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949258.1\|4072_6514_+\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|376618
NZ_CP023969.1\|WP_003189242.1\|169_634_+\|CopD-family-protein	unknown	unknown	gnl\|CDD\|227902
NZ_CP023969.1\|WP_098949259.1\|8310_9945_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|236428
NZ_CP023969.1\|WP_032893158.1\|7309_8314_+\|ligase-associated-DNA-damage-response-exonuclease	unknown	unknown	gnl\|CDD\|274995
NZ_CP023969.1\|WP_032893167.1\|17069_17720_+\|ligase-associated-DNA-damage-response-endonuclease-PdeM	unknown	unknown	gnl\|CDD\|274996
NZ_CP023969.1\|WP_098949262.1\|14589_17070_+\|ligase-associated-DNA-damage-response-DEXH-box-helicase	unknown	unknown	gnl\|CDD\|274994
NZ_CP023969.1\|WP_005785769.1\|17743_17941_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949260.1\|11090_11819_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226670
NZ_CP023969.1\|WP_032893153.1\|3146_3629_+\|LEA-type-2-family-protein	unknown	unknown	gnl\|CDD\|227895
NZ_CP023969.1\|WP_003189235.1\|3625_3826_+\|SEC-C-domain-containing-protein	unknown	unknown	gnl\|CDD\|235521
NZ_CP023969.1\|WP_003189238.1\|2654_3125_+\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|166842
NZ_CP023969.1\|WP_014717255.1\|10253_11033_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270421
NZ_CP023969.1\|WP_098949261.1\|12535_13654_+\|succinylglutamate-desuccinylase/aspartoacylase-family-protein	unknown	unknown	gnl\|CDD\|349468
NZ_CP023969.1\|WP_098949257.1\|2152_2650_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893165.1\|13667_14432_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226961
NZ_CP023969.1\|WP_098949256.1\|1214_1973_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_044272623.1\|11815_12526_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185029

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949258.1\|4072_6514_+\|penicillin-acylase-family-protein	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	2.55648e-167
NZ_CP023969.1\|WP_003189242.1\|169_634_+\|CopD-family-protein	gnl\|CDD\|227902	COG5615, COG5615, Predicted integral membrane protein [Function unknown].	3.02971e-35
NZ_CP023969.1\|WP_098949259.1\|8310_9945_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|236428	PRK09247, PRK09247, ATP-dependent DNA ligase; Validated.	0
NZ_CP023969.1\|WP_032893158.1\|7309_8314_+\|ligase-associated-DNA-damage-response-exonuclease	gnl\|CDD\|274995	TIGR04122, hypothetical_protein, putative exonuclease, DNA ligase-associated. Members of this protein family frequently are found annotated as a putative exonuclease involved in mRNA processing. This protein is found, exclusively in bacteria, associated with three other proteins: an ATP-dependent DNA ligase, a helicase, and putative phosphoesterase.	0
NZ_CP023969.1\|WP_032893167.1\|17069_17720_+\|ligase-associated-DNA-damage-response-endonuclease-PdeM	gnl\|CDD\|274996	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated. Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes.	1.38067e-83
NZ_CP023969.1\|WP_098949260.1\|11090_11819_+\|ABC-transporter-permease	gnl\|CDD\|226670	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism].	3.5651e-96
NZ_CP023969.1\|WP_032893153.1\|3146_3629_+\|LEA-type-2-family-protein	gnl\|CDD\|227895	COG5608, COG5608, LEA14-like dessication related protein [Defense mechanisms].	1.16486e-25
NZ_CP023969.1\|WP_003189235.1\|3625_3826_+\|SEC-C-domain-containing-protein	gnl\|CDD\|235521	PRK05590, PRK05590, hypothetical protein; Provisional.	1.68902e-12
NZ_CP023969.1\|WP_003189238.1\|2654_3125_+\|YchJ-family-protein	gnl\|CDD\|166842	PRK00183, PRK00183, hypothetical protein; Provisional.	2.65198e-117
NZ_CP023969.1\|WP_014717255.1\|10253_11033_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.30674e-106
NZ_CP023969.1\|WP_098949261.1\|12535_13654_+\|succinylglutamate-desuccinylase/aspartoacylase-family-protein	gnl\|CDD\|349468	cd06250, M14_PaAOTO_like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like subfamily; subgroup includes Pseudomonas aeruginosa AotO. An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding P. aeruginosa AotO was characterized as part of an operon encoding an arginine and ornithine transport system, however it is not essential for arginine and ornithine uptake.	7.7714e-116
NZ_CP023969.1\|WP_098949262.1\|14589_17070_+\|ligase-associated-DNA-damage-response-DEXH-box-helicase	gnl\|CDD\|274994	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated. Members of this protein family are DEAD/DEAH box helicases found associated with a bacterial ATP-dependent DNA ligase, part of a four-gene system that occurs in about 12 % of prokaryotic reference genomes. The actual motif in this family is DE[VILW]H.	0
NZ_CP023969.1\|WP_032893165.1\|13667_14432_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226961	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism].	4.42248e-152
NZ_CP023969.1\|WP_044272623.1\|11815_12526_+\|ABC-transporter-permease	gnl\|CDD\|185029	PRK15069, PRK15069, histidine ABC transporter permease HisM.	7.98181e-157

>NZ_CP023969.1|WP_098949258.1|4072_6514_+|penicillin-acylase-family-protein
MASPALLHFLPRFGVAAAVVSALGLAGCQLQNTQDTLPPVAGVQPIKGLAQNVSVRRNAQGMPLIESNTFHDALFSLGYVHASDRITQMVTLRLLAQGRLAEMSGPQVLDVDRFMRAVNLKKSAGELYNASSPRLKRFFEVYARGVNAYLFRYRDKLPADLAQSGYKPEYWKPEDSALLFCLLNFSQSSNLQEELSSLVLAQKVGVDKLAWLTPSAPDEPVPLAEADKLKGVNLSQITGLAGLETVGQQLRSLNALGVTTSSNWAIGPQRSRSGKSLLANDIAAQPQAPSPWNYVQIRAPKYQAVGASIAGLPTLLSGFNGKVAWSMSAVKGDTQDLFLEKVKRQGSALYYENNGKWLPAGVRNETFFIKGQRSIREVVYETRHGALLNSSQALTSGLGLALQTADFKDDKSLDALFDLSRAQNAGKASDATREIRAIALNMIFADASNIGWQVTGRFPNRREGEGLLPSPGWDTRFDWDGYADAMLHPYDQDPAQGWIGTANQRTAPRGYGMQLSNAWDAPERSERLAQLANAGKHDSRSLIAMQYDQTTLFAAKLKNMFQAPGMAQPLKQAIDALPAAERAKAREALERLMAFDGRLATTSADAAIYELFLQESARQIFLDKLGPENSASWKAFVSNASLSYSAIADHLLGREDSPFWDDTRTAQKEDKPAILARTLAAAITTGDSQLGADHKAWQWGKLHSTTWKNTSGQVIRGPFASGGDHNTLNPAPYTWGQDFNTTQVSALRMIIDFGQAEPMMGQGGIGQSGNPASPNYANGIDPSLKGQYLSFPMQPQNFEKVYGKARLTLTPGK
>NZ_CP023969.1|WP_003189235.1|3625_3826_+|SEC-C-domain-containing-protein
MTQQPHVHGPDCNHDHDHHDHDHGHVHGPNCGHAHQEPVRNALKDVGRNDPCPCGSEKKFKKCHGA
>NZ_CP023969.1|WP_032893153.1|3146_3629_+|LEA-type-2-family-protein
MLRMYSLMLALTLGLTGCASWFEDDTPPPHVSLVKVEVVRAKLLEQKFKLYFRVDNRDDADLTVRGLVYKVSLGNLVLTEGESNEWLTVPPRGHKFFKVSVRTNLWPQVREVVQMLKNPDRPVPYRLEGELKTGLFIGNDVQVAHNGEIIPGDFIPEQHR
>NZ_CP023969.1|WP_003189238.1|2654_3125_+|YchJ-family-protein
MSTSICPCGSGNLLDACCGHYHAGHPAPCASALMRSRYSAYVLGLVDYLVATTLPAQQAGLDRDAIAAWSAQSTWLGLEVESSEVFGGQPEHAFVTFTARWHDATGEHSHREQSSFVQNEGRWYFIDPTVEVKAGRNDACLCGSGQKFKKCCSSYF
>NZ_CP023969.1|WP_098949257.1|2152_2650_+|hypothetical-protein
MTVGISARTPQQALAALLDLHRPKRLLLVGASQFPALDAFKAAHPDTEVFYAPPGPLPENLAVQRFDLALVVDCLEHLTKPQGLTLLGGIRNLNASRIAVLADLGACDWKDTDFFSLALQAGERFQRDDQVLTLFTYDLLDYKQVPDWLNARFWANPENFGKYWW
>NZ_CP023969.1|WP_098949256.1|1214_1973_-|hypothetical-protein
MRKVFLLALLVSPVALAQSVSVETNSLMRLPSSTSVLQLERLEVADYGTLLIPATISQVTVDELHLGRDARITIVPSNTALQMQVRDAQLEHGSQITSRGAPGTHEKPAKAGRDLTLRINSLTADALLVDARGGAGAQGYAGLDGANGVDPGCTWGSAGRGFNGDNGGDGRPGAAGAQVRLELPQAFPAEQIKVWVDGGAGGLAGVAGKPGKGGQSKGCLVYRADGGEKGRPGLEGQPGPAGPAGAVTIQRL
>NZ_CP023969.1|WP_003189242.1|169_634_+|CopD-family-protein
MTAFSLAYTLHVLAALIWVGGMFFAWMILRPAAMAALEGPARLKLWANVFQRFFVWVWVAVVLLPISGMGLLHLRFSGFETAPRYVQVMMGLYLVMTALFIRIQALKFPELKAAVAAEDWPAGAAALGQIRKLVGINLIVGLVVVAVASARPMF
>NZ_CP023969.1|WP_032893158.1|7309_8314_+|ligase-associated-DNA-damage-response-exonuclease
MDLVIARPEGLYCPAGDFYIDPWRPVERAVITHAHGDHARTGNQHYLAAAPGEGILRWRLGQDINLQTLAYGERLVHHGVTLSFHPAGHVLGSAQVRLEYQGEVWVASGDYKVEPDGTCAPFEPVRCHTFITESTFGLPIYRWQPQAQIFAGINDWWQANIASGKASVLFCYSFGKAQRILHGLDASIGPILSHGAVEPLNRVYREAGIYIPETLYAGDFKKTDPLLRQALIIAPPSAGGSTWMRRFGDYSDAFASGWMRLRGTRRRRGVDRGFVLSDHADWPGLLWAIEQTGAHRVMVTHGSVGVLVRHLREKGLDAQGFSTEYGDDEEEVTA
>NZ_CP023969.1|WP_098949259.1|8310_9945_+|ATP-dependent-DNA-ligase
MKAFAELYANLDATTSSNAKLAALQAYFLQAPPADAAWAVYFLSGGRPRQLVPTRLLRDMATEAAGIEPWLFEESYQSVGDLAETISLLLPESTYTSEVGLAVWLEEKLLPLRGLPPTDLAERLPALWAQLDQPSLMVCIKLITGSFRVGVSKLLVTRALAAMADLDSKRVAQRLVGYTDLSNRPTAEGYLKLIAAESSDEHAQRGGQPYPFFLAHGLAQPVEQFDTLLGPPTDWQVEWKFDGIRAQLVKREGRLWVWSRGEELLTERFPELHSLVIGLPDGTVIDGEIVVWKDSVQPFALLQQRIGRKTLSKKVLEDAPVAVLAYDLLEYQGDDWRNHTQAERRTQLEQVIAACNQPVLLPSPLLEGQTWAALAEQREASRSLGVEGMMLKDRKGLYGVGRTKDMGLWWKWKVDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGSERTLVPFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVSSVTPSMVFELGFEGIALSKRHKSGIAVRFPRMLRWRQDKAVEEADNLATLQDLLT
>NZ_CP023969.1|WP_014717255.1|10253_11033_+|transporter-substrate-binding-domain-containing-protein
MKKALLTLSALALCMAAGVATAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAELKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGAGYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQDMLQAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKALLDKGIKALHDDGTYATIQKKHFGDLNLYSGK
>NZ_CP023969.1|WP_098949260.1|11090_11819_+|ABC-transporter-permease
MFEDLLQTLGLSAFSLKGFGPLLLQGTWMTIKLSVLSLAVSVLLGLLGASAKLSSLTIVRIPAQLYTTLIRGVPDLVLMLLIFYSLQTWLSGFTDFMEWEYIEIDPFSAGVITLGFIYGAYFTETFRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYSAGAREAVR
>NZ_CP023969.1|WP_044272623.1|11815_12526_+|ABC-transporter-permease
MIELLQEYWRPFLYSDGQHITGLAMTLWLLSGSLVIGFLVSIPLSIARVSRKRLVRWPVQFYTYLFRGTPLYIQLLICYTGIYSLAAVRAQPVLDAFFRDAMNCTLLAFALNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDILKVARDANSATFMTFQSFGIAALIYLTVTFALVGLFRLAERRWLAFLGPSH
>NZ_CP023969.1|WP_098949261.1|12535_13654_+|succinylglutamate-desuccinylase/aspartoacylase-family-protein
MHHQLHDLIAPVPGTARQIHSFHFGPQQPEGKVYIQSSLHADELPGMLVAWHLKARLAELEAAGRLRSEIVLVPVANPVGLEQVLMDIPLGRYELESGQNFNRLFVDLSEDVGNQVENLLGDDPQRNAHLIRSALSHALAAHTAQTQLHSQRLVLQRLACDADVVLDLHCDFEAVAHLYTTPDAWPQVEPLARYLGSEANLLATDSGGQSFDECFTLVWWQLQQRFGERYPIPMGSLSVTVELRGQGDVNHGLAALDCQAIIDYLIHFGAIHGDAAPLPALAYPATPLAAVEPVTTPVGGLLVFNALPGEYLEAGQWVADIIDPITDRVTPVHCQHAGLLYARSLRRMATAGMVICHVAGTQAYRSGYLLSP
>NZ_CP023969.1|WP_032893165.1|13667_14432_+|ATP-binding-cassette-domain-containing-protein
MYKLTVEGLHKSYGDNQVLKGVSLKAKTGDVISLIGASGSGKSTFLRCINFLETPNDGAMTLDGQAIRMVSDRHGMRVADDAELQRLRTRLAMVFQHFNLWSHMSVLENITMAPRRVLGCSKKDAEDRARRYLDKVGLPARVADQYPAFLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVIQGLAEEGRTMIMVTHEMSFARKVSSQVLFLHQGLVEEQGSPEDVLGNPQSLRLQQFLSGNLK
>NZ_CP023969.1|WP_098949262.1|14589_17070_+|ligase-associated-DNA-damage-response-DEXH-box-helicase
MAKTHDFAKQWFATQGWKPFAFQKAVWAAVKAGQSGLLHASTGAGKTYALWFAALNRFAITRPPAAGKRKPPAEPLTVLWITPMRALAADSARALQAPLEALQIPWSVGLRTGDTSSSERARQTRRQPTALVTTPESLTLMLARADSETSLAHLRMVIVDEWHELIGNKRGVQLQLALARLRRWHPQLMVWGISATLGNQAHALEVLVPQGGGVNVQGQTAKALKVDTLLPAVTERFPWAGHIGLKMLPQVVNEVEASSSCLVFTNTRAQSEIWYQAILDARPDWAGLIALHHGSLSRETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVPTHSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGFTPAALLDEVRGAWAYRDLTEADWAWALGFVRHGGLSLTAYPDYRRVEPDEQGIWRVPDARLARRHRMSVGTIVSDASIQLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVRRSTAKKAAVPRWNGGRMPLSNELAQAVVERFDAAAHGHFDGPEMQAVQPLLHTQLRWSGLPTREHLLAETLRSREGWHLFLYPFAGRQVHLGLASLLAWRVSQQQPLTFSIAVNDYGLELLSATEVQWPQLLNATLLSPQELLADVIASLNAGELALRRFREIARIAGLVFAGYPGAPKSTRQVQASSGLFFEVFKQYDPQNLLLAQAGEEVLRDELDIRRLEHTLNHLSTLKLDLHTIQRPTPLAFPLLVERMRESMSSEKLSERIARMVKDLEKVADKGQG
>NZ_CP023969.1|WP_032893167.1|17069_17720_+|ligase-associated-DNA-damage-response-endonuclease-PdeM
MHYPLMLEGEELWLLPDKAVYWPARRCLLIADAHFGKASAYRSLGQPVPQGTTTANLERLDRLLTALPCAQLIFLGDFLHGPGSHASGTLNAIRAWRERNRPLALTLIRGNHDKRAGDPPLDLGIDVVAEPLLMGPFALQHEPDAHASHHVLAGHVHPVYHLRGKGRQRLRLPCFQIGARLSLLPAFGAFTGGYAVEQAQDHRIFVIGDHQVWPIQ
>NZ_CP023969.1|WP_005785769.1|17743_17941_-|hypothetical-protein
MKIDPRISAELARLEPNQIGVLAWSLMANPAHAGGIPGQPEPDYPQPTEPGEPTLPDEPPPAPVA

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Crispr_ID: NZ_CP023969_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_2

212002-212113

Orphan

Consensus_repeat	Method
GGGGTGTCAGGTGGATAGGTGTCGGCTGGGAGGCCGCCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_2

>merge|NZ_CP023969|2|212002-212113|CRISPRCasFinder
GGGGTGTCAGGTGGATAGGTGTCGGCTGGGAGGCCGCCATCGCAGGCAAGCCAGCTCCCACAGGTTGATCGTGGGGTGTCAGGTGGATAGGTGTCGGCTGGGAGGCTGCCAT

>NZ_CP023969|2|2|212002-212113|CRISPRCasFinder
GGGGTGTCAGGTGGATAGGTGTCGGCTGGGAGGCCGCCAT	CGCAGGCAAGCCAGCTCCCACAGGTTGATCGT
GGGGTGTCAGGTGGATAGGTGTCGGCTGGGAGGCTGCCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949369.1\|213051_213672_+\|energy-transducer-TonB	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893222.1\|215244_215547_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098952559.1\|210474_211776_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP023969.1\|WP_098949366.1\|208317_209418_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP023969.1\|WP_098949365.1\|205249_208312_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP023969.1\|WP_098949372.1\|217412_220058_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
NZ_CP023969.1\|WP_032893208.1\|200180_200558_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949367.1\|209511_210174_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
NZ_CP023969.1\|WP_098949363.1\|203657_204059_+\|YbaY-family-lipoprotein	unknown	unknown	gnl\|CDD\|378225
NZ_CP023969.1\|WP_032893224.1\|215707_216394_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP023969.1\|WP_003189094.1\|220883_221309_+\|DUF4398-domain-containing-protein	unknown	unknown	gnl\|CDD\|379572
NZ_CP023969.1\|WP_032893227.1\|220255_220600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949362.1\|201086_203606_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsB	unknown	unknown	gnl\|CDD\|235325
NZ_CP023969.1\|WP_032893225.1\|216484_217132_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
NZ_CP023969.1\|WP_056790197.1\|212172_212955_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377360
NZ_CP023969.1\|WP_098949364.1\|204862_205108_-\|type-III-secretion-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003189124.1\|204086_204776_+\|DUF4197-domain-containing-protein	unknown	unknown	gnl\|CDD\|379394
NZ_CP023969.1\|WP_098949370.1\|213675_214374_-\|extensin-family-protein	unknown	unknown	gnl\|CDD\|369129
NZ_CP023969.1\|WP_098949371.1\|214384_215245_-\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|182366
NZ_CP023969.1\|WP_003189131.1\|200695_200905_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098952559.1\|210474_211776_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.75967e-07
NZ_CP023969.1\|WP_098949366.1\|208317_209418_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.09811e-75
NZ_CP023969.1\|WP_098949365.1\|205249_208312_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP023969.1\|WP_098949372.1\|217412_220058_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NZ_CP023969.1\|WP_003189094.1\|220883_221309_+\|DUF4398-domain-containing-protein	gnl\|CDD\|379572	pfam14346, DUF4398, Domain of unknown function (DUF4398). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 127 and 269 amino acids in length.	2.20882e-10
NZ_CP023969.1\|WP_098949363.1\|203657_204059_+\|YbaY-family-lipoprotein	gnl\|CDD\|378225	pfam09619, YscW, Type III secretion system lipoprotein chaperone (YscW). This entry is encoded within type III secretion operons. The protein has been characterized as a chaperone for the outer membrane pore component YscC. YscW is a lipoprotein which is itself localized to the outer membrane and, it is believed, facilitates the oligomerization and localization of YscC.	1.85987e-40
NZ_CP023969.1\|WP_032893224.1\|215707_216394_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	6.13806e-71
NZ_CP023969.1\|WP_098949362.1\|201086_203606_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsB	gnl\|CDD\|235325	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB.	0
NZ_CP023969.1\|WP_032893225.1\|216484_217132_-\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	1.01495e-138
NZ_CP023969.1\|WP_056790197.1\|212172_212955_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377360	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase. This is a family of putative SAM-dependent methyltransferases.	4.34099e-120
NZ_CP023969.1\|WP_098949367.1\|209511_210174_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	6.44799e-33
NZ_CP023969.1\|WP_003189124.1\|204086_204776_+\|DUF4197-domain-containing-protein	gnl\|CDD\|379394	pfam13852, DUF4197, Protein of unknown function (DUF4197). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 228 and 249 amino acids in length.	8.80002e-93
NZ_CP023969.1\|WP_098949370.1\|213675_214374_-\|extensin-family-protein	gnl\|CDD\|369129	pfam06904, Extensin-like_C, Extensin-like protein C-terminus. This family represents the C-terminus (approx. 120 residues) of a number of bacterial extensin-like proteins. Extensins are cell wall glycoproteins normally associated with plants, where they strengthen the cell wall in response to mechanical stress. Note that many family members of this family are hypothetical.	2.30326e-87
NZ_CP023969.1\|WP_098949371.1\|214384_215245_-\|DUF72-domain-containing-protein	gnl\|CDD\|182366	PRK10302, PRK10302, hypothetical protein; Provisional.	1.32326e-80
NZ_CP023969.1\|WP_003189131.1\|200695_200905_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.07913e-29

>NZ_CP023969.1|WP_098952559.1|210474_211776_-|IS4-family-transposase
MAKLALEQAIAPEWVDQVFEEHRQRQYSRELLFSTIIKLMSLVSLGLKPSLHAAARQLEDLPVSLAALYDKISRTEPALLRALVTGSAQRLTPTIKELGCTTMLPDWQVRVVDGNHLASTEKRLGALRQERGAARPGFSVVVYDPDLDQVIDLQACEDAYASERVCVLPLLANAEPGQVWLADRLYCTLPVMEACEQVQTSFVIRQQAKHPRLIQEGEWQEPVPVETGSVREQIIQVRGGYQCRRVELTLHSPTDSGDSSLMFWSNLPESVSAEQIAQLYRRRWSIEGMFQRLEAILESEIETLGSPKAALLGFTTAVLAYNVLAVLKRSVEQAHRETQPDGWEASIYHLAVQVRSGYEGMQIALPSEYLPAIPVEKLAQRLLELARNIQPKQVAKSPRGPKVPKPKTWVQGKAVNAHVSTDRVIKAAKTKRP
>NZ_CP023969.1|WP_098949367.1|209511_210174_+|TetR/AcrR-family-transcriptional-regulator
MSDNPLNTASPGRPKDMAKRQAILESAKSLFLGKGYANTSMDAVALAAGVSKLTVYSHFTDKETLFTAAVVAKCEEQLPVMYFELPEGMPVETVLLNIARGFHRLINSEESVNLHRLMMTTGNQDVKLSQIFFNAGPMRMLQGMERLLGKIHQSGALSIDTPLKAAEHFFCLLKGTANFRLLYGCGGQLSAQEAEEHVQDVVRLFMRAYRHNSVGGSDLR
>NZ_CP023969.1|WP_098949366.1|208317_209418_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MRSAFLPLALPVSLVFLLAACGHEEAAQTTVRPAMVVQPQPSAQAMDSYPGEVRARYEPDLAFRIGGKVSKRLVEEGERVKANQPLAELDPQDVRLQLEATRAQVAAAEANLSLVRAERDRYKTLMDRQMVSRSQYDNSENLYRAGEARLKQIKAEFDVSSNQAGYAVLRAPQDGVVAKRAVEVGQVVSAGQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPEQRFAGRIRELSPAADPKSRTFAARVAFTGGKVPAELGQSARVFIQAEGVIPLSVPLSALSAENGASYVWRVKPDNTLERTPVRIGAFGENTVPVLEGLAATDWVVAAGVHVLHEGQSVRPVDRSNRVVNLAAKE
>NZ_CP023969.1|WP_098949365.1|205249_208312_-|efflux-RND-transporter-permease-subunit
MGFNLSEWALRNRQIVLFLMILLAVVGTLSYTKLGQSEDPPFTFKAMVIKTNWPGATAQEVSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFIARDSMRSAQIPELWYQVRKKISDIRHTLPPDIQGPFFNDEFGTTFGNIYALSGDGFDYAVLKDYADRIQIQLQRVPDVGKVELLGLQDEKIWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPTERVQLRVSGNFKTVEEIRNFPIRVGDRTFRIGDVADIHRGFNDPPAPRMRYMGADAIGLAVAMRDGGDILVLGKALEAQFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTGMVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAVVFVPYLGEKLLPDLAKIHAAKHGTDGPDPYGTPFYQRVRRWVEWCVRRRKTVIVLTLLLFIGSVALFRFVPQQFFPASGRLELMVDLKLAEGASLSNTDEQVKRLEALLKEHAGINNYVAYAGTGSPRFYLPLDQQLPAASFAQFVVLADTIEERESLRTWLIETLNEQFPELRSRVTRLENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENTHVVNVHLDWEEPSKIVYLNIDQDRARALGVSTANLSKFLQSSLTGSSVSQYREDNELIEILLRGTVHERSELSRLPSLAVPTDNGKSVALSQIATLEYGFEEGIIWHRNRLPTVTVRADIYGKEQPATLVQQILPTLADVRAELPDGYLLEVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMLQLRSFSRTAMVFLTAPLGLIGVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEATVRRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRIKKEE
>NZ_CP023969.1|WP_098949364.1|204862_205108_-|type-III-secretion-protein
MLLQALGNFYSGIGMMLGGGQMGGACAKHSHNDSVSRRELSDALKSFKYDFPQPTSHITINNSVANANNNANSNANTQIGR
>NZ_CP023969.1|WP_003189124.1|204086_204776_+|DUF4197-domain-containing-protein
MLRKSLRLTALCAGLLFGANAMALDLGSLSQGDASGGLKDALTQGAQIAVKQLGTPGGFSNNPDVKIGLPGKLGKVADKLKMFGMGDQVTQLETSMNKAAETAVTQAQPILVNAVKNMSVTDAKGILSGGQDSATQYLNKSSREEIRAKFLPIVKAATDKVGVAQQYNALAGKAAAFGAVDAKSANVENYVTEQALDGLFKMIAQQEETIRKNPAAAATSLAKKVFGAL
>NZ_CP023969.1|WP_098949363.1|203657_204059_+|YbaY-family-lipoprotein
MKKLILLGLTALLGACHSMTPPPKASLDGEVFYLQRIALPPAATLSVSLQDVSLMDAPAVTLAEQKGPVKGQVPLPFHLSYDPAQVKPGHTYSVSARIELDGKLLFITTERHTVQLNGQDPQPLRLRLDAAAH
>NZ_CP023969.1|WP_098949362.1|201086_203606_+|glycerol-3-phosphate-1-O-acyltransferase-PlsB
MTRSPFRRLVFGTLRRLLYLWVRSETINQSSLTLNLDRSRPVFYVLQSPSLTELAVVDAECTKAGLPRPVLPVSVGPLMEPAAFFYLTPDPDWLGRQDKRGAPPTLTRLVNTLTEHAEENAQIIPVSVFWGQSPESESSPWKLLFADSWAVTGRLRRLLSILILGRKTRVQFSAPINLRELIEHNKGHERTVRMAQRILRVHFRNLKTAVIGPDLSHRRNLVKGLVNMPLVRQAIADEAEREKIAPEKAKALALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNNIEGVQKVAQGYEVIYVPCHRSHIDYLLLSYLLFKNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTFKGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQPKTGMLAITLRSFLRSSRMPIVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVVGALKQRFGQVAVNFGEPIKLAEFLDAEQPGWRAQELGPNYKPAWLNETTNRLGEQVARHLNEAAAVNPVNLVALALLSTTRLALDEQAMARQLDLYLALLRRVPYSPHTTLPEGDGLALIKHVKDMNLLSEQSDALGKIVYLDEQNAVLMTYYRNNVLHIFALPALLASFFQSSSRMTREQILRYTHALYPYLQSELFIRWSREDLDSVVDQWLDAFVEQGLLRFENAVYLRPAPSSRHFVLLTLLSKSIAQTLQRFYMAISLLLNSGQNSISAEELEDLCTIMAQRLSILHGLNAPEFFDKSLFRHFIQTLLEQDVLRRDEAGKLGYHDLLGELAEGAAKRVLPADIRLSIRQVALHRVDGAAEAAAEPVAANPEENR
>NZ_CP023969.1|WP_003189131.1|200695_200905_-|cold-shock-protein
MTTRETGNVKWFNDAKGYGFIQREDGKDVFVHYRAIRGEGHRSLAEGQQVEYAVVTGEKGLQAEDVVGL
>NZ_CP023969.1|WP_032893208.1|200180_200558_+|hypothetical-protein
MRQPDIEIYLKDADVDHKAIAAWLGAALGPCTDWVQKGQTYKCKAGNVPVTWLPKAVGKWNSLFLESDQTPWDDDIACARAAFAALNVEVRCAPGTWVEEEGEESADRWIRISADGEEEITWKTA
>NZ_CP023969.1|WP_056790197.1|212172_212955_-|class-I-SAM-dependent-methyltransferase
MNEQPAASRIQVQALADSFQARAEQWASLLGLPLQVADADFSLQVGEHGLQLQQLGPDAPGPVRVDFVEGGAAHRRLYGGGSGQMIAKAVGIAQGVRPRVLDATAGLGKDAFVLASLGCEMSLIERQPLIGALLEDGLARAAEDFEVAPIVARMKLLKGNSIDVMLNWQGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDDPDAPALLAAALALASHRVVVKRPRKAPCIEGPKPSHALDGKSSRYDIYPKKALKA
>NZ_CP023969.1|WP_098949369.1|213051_213672_+|energy-transducer-TonB
MSDILPLSIGVLPTHNHYGLRNTQALAGVSHVWQDFFARALAEQLGETPDALAANAPAPADPAVEPREGADLLAQILTQRECDVKDTEIAPPEPLFLPIAEFETELLPPAATPFPEEEIVAQQRQQAFESEWVRPVVLNAGQPLPEPGPAPQPRPLHLPIAEFELDLLPPAATPYLEEELLAQQKALDFDYYWARPLVTHNLRLAA
>NZ_CP023969.1|WP_098949370.1|213675_214374_-|extensin-family-protein
MGVVKALSVLLLLMGAVALAVWRGWVPMPAEWNPWAPLDVRASPNLLTRYKLSRLQDDPALCDQVLNTSGLRVSRQADTSADAACPLRNVLRVQGADVALSSSFLASCPLAVAFALFERHSLQPAAQAVFGQAVSRVEHLGSFACRNIYNRADGRLSQHASANALDIAGFRLADGRSISVLKDWPGQGDSARFLRLVRDGACDDFNVVLSPDYNAAHRNHFHLDMGRWWVCR
>NZ_CP023969.1|WP_098949371.1|214384_215245_-|DUF72-domain-containing-protein
MRLPYYIGCPSWSENAWREYLYPVDARSNDYLGLYSQVFNAVEGNTTFYARPSAATVQRWAEIMPDDFRFTAKFPGDISHAGDLREQLPAAESFVGLMSPLGERVSPLWLQLSKGFTPPRLAELAGFLDGIDRPLAVEVRHEQFFAKGDAERRLNRLLRDRGVERICLDPRALFSCTSTSEAVLHAQSKKPRVPPRPAALTQFPQVRFIGHPDLEANDPFLIPWVEKIASWIEEGRTPYMFLHTSDNRLAAQLALRFHAKLMVRLPGLPPLPTLHREPVAEHLGLL
>NZ_CP023969.1|WP_032893222.1|215244_215547_-|hypothetical-protein
MRIDGFSSQSYPLKRKPRKASVTVDESVEDSPDFIEVHTDTPSKAQGAASARISGVPARQQDMVFPRSMSKSVATALASYLTTAGFVEWDMEVLGLDIHI
>NZ_CP023969.1|WP_032893224.1|215707_216394_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIKQLLEDAGTTLAAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLAQRALREHGASQVAAAIDARMDEVYWGCYRETAGEMRLVGTEAVLAPEAAQLPADASGDWFGAGTGWGYGERIKVTCAEQDAAMLPHAEDLLALARFAFERGEAVAADQAAPVYLRDKVAQTKAERGII
>NZ_CP023969.1|WP_032893225.1|216484_217132_-|adenylate-kinase
MRVILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLIAKSVMDSGGLVSDDLIINLVKERISQDDCKNGFLFDGFPRTIPQAEALVKAGVELDAVVEIAVEDEEIVQRIAGRRVHEGSGRVYHIVYNPPKVEGKDDVTGEDLVQRKDDTEETVRHRLSVYHSQTKPLVDFYQKLSAAQGKPKYSHIPGVGSVEAITAKVLQALS
>NZ_CP023969.1|WP_098949372.1|217412_220058_-|phosphoenolpyruvate-carboxylase
MSDIDARLREDVHLLGELLGNTIREQYGEAFLEKIEQIRKGAKADRRGAVSEKTAGDELSASLNQLQEQELLPVARAFNQFLNLANIAEQYQLIHRRDESQPAPFESRVLPELLARLQNEGHSNESLARQLARLDIELVLTAHPTEVARRTLIQKYDAIAAQLALQDHRDLTTAEREQIRERLQRLIAEAWHTEEIRRVRPTPVDEAKWGFAVIEHSLWQAIPNYLRKADQALHAATGLRLPLEAAPIRFASWMGGDRDGNPNVTAPVTREVLLLARWMAADLYLRDIDQLASELSMQQASPALHAKVGDSVEPYRALLKQLRERLRATRQWAHTSLTSTTPAPADVLQNNRDLLDPLQLCYQSLHECGMGVIADGPLLDCLRRAVTFGLFLVRLDVRQDSSRHSAAMTEITDYLGLGRYEDWDEEARISFLTQELTNRRPLLPGYFNPSADTAEVLNTCKEIAAAPAASLGSYVISMAGAASDVLAVQLLLKESGVQRPMRVVPLFETLADLDNAGPVMERLLQLPGYRARLQGPQEVMIGYSDSAKDAGTTAAAWAQYRAQERLVDICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPPEPAWRHLMDELAADGVSAYRAVVRENPQFVEYFRQSTPEQELGRLPLGSRPAKRRAGGIESLRAIPWIFGWTQTRLMLPAWLGWEAALSKALERGEGQLLGQMREQWPFFRTRIDMLEMVLAKADADIARLYDERLVQPDLLALGAHLRDLLSQACDVVLGLTGQSQLLAHSPDTLEFIRLRNTYLDPLHLLQAELLARSRQQEAAQDSPLEQALLVSVAGIAAGLRNTG
>NZ_CP023969.1|WP_032893227.1|220255_220600_+|hypothetical-protein
MKIRELAQHWEETAKGRLTKTEYAIHLDVEAAARLAAIAEMYPKRHVEELLGELIGAALEELETSFPYIQGQQVIATDEEGDPLYEDVGPTPRFLTLSRRHLHDLSAATDEQKH
>NZ_CP023969.1|WP_003189094.1|220883_221309_+|DUF4398-domain-containing-protein
MELKTMNTSTAKSSFNHLRGLKLAALAIGTSFVLAGCAGNPPTEQYAVTQSAVNSAVSAGGTEYAAVEMKSAQDKLKEAEIAMHDKNYDKARQLAEQAEWDARVAERKAQAAKAQQAVKDSQKAVDELRKEGMRPAAIMQK

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Crispr_ID: NZ_CP023969_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_3

239199-239302

Orphan

Consensus_repeat	Method
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_3

>merge|NZ_CP023969|3|239199-239302|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCTCCCAGCCTACGGCTATCTACCTGACACCCCGCGGCCCAATTGTGGGAGCTGGCTTGCCTGCGAAGGCGGCCT

>NZ_CP023969|3|3|239199-239302|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCT	CCCAGCCTACGGCTATCTACCTGACACCCCGCGGCCCAAT
TGTGGGAGCTGGCTTGCCTGCGAAGGCGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949382.1\|246571_246895_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|162974
NZ_CP023969.1\|WP_003189082.1\|227581_229084_-\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP023969.1\|WP_098949377.1\|231603_232614_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	unknown	unknown	gnl\|CDD\|237135
NZ_CP023969.1\|WP_032893246.1\|248851_249322_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182510
NZ_CP023969.1\|WP_014717198.1\|230549_231551_-\|PleD-family-two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|226229
NZ_CP023969.1\|WP_098949378.1\|232610_234890_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_CP023969.1\|WP_098949379.1\|235584_236847_-\|chemotaxis-protein-CheR	unknown	unknown	gnl\|CDD\|224271
NZ_CP023969.1\|WP_032893242.1\|244256_246158_-\|potassium-transporter-Kup	unknown	unknown	gnl\|CDD\|225700
NZ_CP023969.1\|WP_003189066.1\|242448_242634_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893244.1\|246891_247227_+\|putative-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|226162
NZ_CP023969.1\|WP_044272240.1\|234886_235588_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP023969.1\|WP_078467916.1\|226758_227475_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225767
NZ_CP023969.1\|WP_098949380.1\|236843_237356_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP023969.1\|WP_044272237.1\|237355_238978_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP023969.1\|WP_098949376.1\|229164_230260_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP023969.1\|WP_169855583.1\|247422_248751_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NZ_CP023969.1\|WP_056790149.1\|240768_242394_+\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327
NZ_CP023969.1\|WP_032893241.1\|242937_244044_-\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP023969.1\|WP_056790152.1\|239756_240464_-\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP023969.1\|WP_003189059.1\|250064_250775_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211329

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949382.1\|246571_246895_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|162974	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.	1.33872e-45
NZ_CP023969.1\|WP_003189082.1\|227581_229084_-\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP023969.1\|WP_098949377.1\|231603_232614_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	gnl\|CDD\|237135	PRK12555, PRK12555, chemotaxis-specific protein-glutamate methyltransferase CheB.	0
NZ_CP023969.1\|WP_032893246.1\|248851_249322_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182510	PRK10514, PRK10514, putative acetyltransferase; Provisional.	3.24529e-40
NZ_CP023969.1\|WP_014717198.1\|230549_231551_-\|PleD-family-two-component-system-response-regulator	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	3.44179e-101
NZ_CP023969.1\|WP_098949378.1\|232610_234890_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	3.2306e-131
NZ_CP023969.1\|WP_098949379.1\|235584_236847_-\|chemotaxis-protein-CheR	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	2.12079e-74
NZ_CP023969.1\|WP_032893242.1\|244256_246158_-\|potassium-transporter-Kup	gnl\|CDD\|225700	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism].	0
NZ_CP023969.1\|WP_032893244.1\|246891_247227_+\|putative-addiction-module-antidote-protein	gnl\|CDD\|226162	COG3636, COG3636, Predicted transcriptional regulator [Transcription].	1.98867e-16
NZ_CP023969.1\|WP_044272240.1\|234886_235588_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.52865e-30
NZ_CP023969.1\|WP_078467916.1\|226758_227475_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|225767	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown].	4.40541e-44
NZ_CP023969.1\|WP_098949380.1\|236843_237356_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.44466e-24
NZ_CP023969.1\|WP_044272237.1\|237355_238978_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	4.22915e-58
NZ_CP023969.1\|WP_098949376.1\|229164_230260_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP023969.1\|WP_169855583.1\|247422_248751_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NZ_CP023969.1\|WP_056790149.1\|240768_242394_+\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0
NZ_CP023969.1\|WP_032893241.1\|242937_244044_-\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	0
NZ_CP023969.1\|WP_056790152.1\|239756_240464_-\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	7.34602e-75
NZ_CP023969.1\|WP_003189059.1\|250064_250775_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|211329	cd02555, PSSA_1, Pseudouridine synthase, a subgroup of the RsuA family. This group is comprised of bacterial proteins assigned to the RsuA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The TruA family is comprised of proteins related to Escherichia coli RsuA.	1.11628e-93

>NZ_CP023969.1|WP_044272237.1|237355_238978_-|methyl-accepting-chemotaxis-protein
MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIEVSENSVRDDAVPGVFFSSMIRSAWVDSYLQTQELVGIHKNQGISEVDKQDYKSFEARLEQHMGSYAATINIDQDRTEFDAFEKLHQNYNRILAQVLEAHQSNNSAEALRLFNEQLTPAWTAGRMKLNDIINENKQVADNATAAIDDAVAAAKISMGVSLLLAILAAALCGLLLMRAIMAPMQRIVQILEVMRTGDLSKRLNLERKDEFNAVETGFNDMMTELTALVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEIGATSREIAATSKDLVRTMTEVSTAADQASVAAGSGQQGLARMEETMHSVMGAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMSEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHALVQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV
>NZ_CP023969.1|WP_098949380.1|236843_237356_-|purine-binding-chemotaxis-protein-CheW
MSELAAKRGAVPAAKKALFLVFRIGNERFALKATEVAEVLPRLVLKPIAQAPLWVAGIFAHRGVLVPVIDLSALTFGTSAQARTSTRLVLVNYQPQPWSEARWLGLILEQATDTLRCDPAEFQPYGLDNQQAPYLGPVREDAQGLMQWIGVADLLTAPVRALLFCAELSL
>NZ_CP023969.1|WP_098949379.1|235584_236847_-|chemotaxis-protein-CheR
MSNDPRFFAFLKERIGLDVASVGEAIIERAVRQRCQSSQSPSAEAYWQHLQTSHDEQQALIEAVIVPETWFFRYPESFATLARLAQVRLAEINQMRALRILSLPCSTGEEPYSIAMALLDAGLAPHQFKVQGMDVSPLSVERARRGVYGKNSFRGADLEFRDRHFTEDAGSYRIADRVREQVRLQVGNLLDPALLANEPTYDFVFCRNLLIYFDQPTQKQVFDVLKALTHVDGVLFIGPAEGSLLGRHGMRSIGVPQSFAFSRHVEPTPPPAPVVKPTPAPLPQRRAAPIPLKPRPFSTVSPSVPPVKGVPTDAGDLLSQIATLANEGKSAEARAACERYLSSHPPAAQVFYWLGLLSDVAGSALEAQGYYRKALYLEPQHPQALMHLAALLESQGDSAGARRLQARAARSERADSESKR
>NZ_CP023969.1|WP_044272240.1|234886_235588_-|purine-binding-chemotaxis-protein-CheW
MSSPDVLDTAGLDLTLTDTQAIDDCWNRIGIHGDKSCPLLAEHIHCRNCSVYSAAATRLLDRYALQQDDHHAQATAEADNEVVTRSLLMFRLGEEWLGIATRCLVEVAPLQPIHSLPHQRSRALLGVANVRGALVACLSLVELLGLDSTSTGASGGRIMPRMLIIAAQDGPVVVPVDEVDGIHAIDERTLQAASVSGTQASARYTQGVLQWKGRSLRWLDEAQLLSAVTRSLA
>NZ_CP023969.1|WP_098949378.1|232610_234890_-|hybrid-sensor-histidine-kinase/response-regulator
MTPDQMRDASLLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVAHVMEDCLVSAQEGRLYLQPEHIDALLQGTDLLMRIATPGNDVGPADIEAYVALMERLLDPSQPIATPLPKPEPLSVPQVDALLLEPELEPAPVVSSEAPRQNKRMTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPYLASLQRLKRIQSNSLRALDALDGQLKSLDLNLEAQEALADTRRLLSEAQALLAEKNAELDEFGWQAGQRAQVLYDTALACRMRPFADVLAGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIETPEQRVLAGKPAEGLIRLRASHQAGLLVLELSDDGNGVDLERLRGTIVDRNLSPVETALRLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGQGSRFHLEVPLTLSVVRSLVVEVGEEAYAFPLAHIERMCDLAPDDIVQLEGRQHFWHEGRHVGLVAASQLLQRPPGQTPSDTLKVVVIRERDAVYGIAVERFIGERTLVVLPLDDRLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKLLNTGRLERIARRSQQATEAPRKRVLVVDDSLTVRELQRKLLLNRGYEVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVTLLRRDSRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA
>NZ_CP023969.1|WP_098949377.1|231603_232614_-|chemotaxis-response-regulator-protein-glutamate-methylesterase
MRIAIVNDMPLAVEALRRALSYEPAHEVVWVASNGLEAVQRCAELTPDLILMDLIMPVMDGVEATRQIMADTPCAIVIVTVDRQANVSRVFEAMGHGALDVVDTPTLGVGNPKDAAAPLLRKILNIGWLIGQRGTRVRAETPPQRVTGKRQRLVAIGSSAGGPAALEVLLKGLPRDFPAAIVLVQHVDQVFAAGMAEWLSSASGLPVRLACEGEPPQPGVVLLAGTNHHIRLLKNGTLAYTAEPVNEIYRPSIDVFFESVASYWNGDAVGVLLTGMGRDGAQGLKLMREQGYLTIAQDQQSSAVYGMPKAAAAIDAAVEIRPLDRIAPRLLEVFAK
>NZ_CP023969.1|WP_014717198.1|230549_231551_-|PleD-family-two-component-system-response-regulator
MNDLQLDDFKTDENAAMVLLVDDQAMIGEAVRRGLAHEENIDFHFCADPHQAIAQAIRIKPTVILQDLVMPGLDGLTLVREYRNHPATANIPIIVLSTKEDPLIKSAAFAAGANDYLVKLPDNIELVARIRYHSRSYMTLLQRDAAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMRDQTQLSLLMIDVDFFKTFNDSFGHVEGDEALRKVANTIREASSRPSDLPARYGGEEFALVLPNTSPGGARLVAEKLRMAVAALKIPHIAPAEGASLTISIGLSTLTPVQGTDCRQLIMAADKGLYTAKNNGRNQVGIE
>NZ_CP023969.1|WP_098949376.1|229164_230260_-|peptide-chain-release-factor-2
MEINPILNTIKDLSERFETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLGDCRDLLDMAVEENDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLDASRIKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL
>NZ_CP023969.1|WP_003189082.1|227581_229084_-|lysine--tRNA-ligase
MSDQQLDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRDNYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMRPQA
>NZ_CP023969.1|WP_078467916.1|226758_227475_-|TetR-family-transcriptional-regulator
MNRVMAQEGAAGIAAAVAESVQYQGRKASRRGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAEAGVPLSATTYYFKDIDDLLTDTFAQYVERSAAFMGKLWVRNEGLLREMVAYGDGSPESRSQLADDIARLTADYVLRQLTNRREYLMAEQAFRQEALLNPRLAELVRSHQQILLQGTGQFFQVLGSREPQQDAKVLTAIISRMEYQGLLGGAEPLTGEEMLEILKRYMHLVLASV
>NZ_CP023969.1|WP_056790152.1|239756_240464_-|tellurite-resistance-TerB-family-protein
MNTRGLLDQLLKSGQDMLQNKAGGQRKSNDKGALGGLLNGGGLGSMLGGAGGGALAAGAMGLLLGNKKARKFGGKALTYGGLAALGVIAYKAYGNWQAQQASAPQGEPQTIDRLPAAQVEQHSQGILKALVAAAKADGHVDERERALIEGEFTKLDNDQELQHWLHAELNKPLDPTDVARAASTPEMAAEMYIASVMLVDEENFMEKAYLDELARQLKLEPGLKLELEKQVRLNA
>NZ_CP023969.1|WP_056790149.1|240768_242394_+|glucan-biosynthesis-protein-D
MHRRNLLKASMAIAAYTGLSASGLLAAQAWAGNRAADGKAVAFDFESLKAQAKQLATRGYQDTKQVLPPTLATMTPQNFNAIGYDRNHSLWKELNGQLDVQFFHVGMGFKTPVRMHSVDPKTREAREVHFRPSLFNYEKTTVDTQQLTGDLGFSGFKLFKAPELDRHDVLSFLGASYFRAVDSTGQYGLSARGLAIDTYAKKREEFPDFTQFWFETPDKNATRFVVYALLDSPSATGAYRFDIDCQANQVVMAIDAHINARTAIEQLGIAPMTSMFSCGTHERRMCDTIHPQIHDSDRLAMWRGNGEWVCRPLNNPAKLQFNAFADTDPKGFGLVQTDHEFASYQDTVDWYSKRPSLWVEPTTAWGEGSIDLLEIPTTGETLDNIVAFWTPKKPVAAGDSLNYGYKLYWSALPPVSTPLAQVDATRSGMGGFTEGWAPGEHYPKVWARRFAVDFKGGGLDRLPAGTGIEPVVTCSHGEVKDFSVLVLDNIKGYRILFDWYPTSDSVEPVELRLFIRTQDRTLSETWLYQYFPPAPEQRKYT
>NZ_CP023969.1|WP_003189066.1|242448_242634_-|hypothetical-protein
MAKSYGVAGAVASFLSRRMSLRGRRLSSDEMELLAQYRALTESDQVAMRYLIGAMKSVSRF
>NZ_CP023969.1|WP_032893241.1|242937_244044_-|NADH:flavin-oxidoreductase/NADH-oxidase
MSQLLEPYTLRQLTLLNRIAVSPMCQYSSDDGLANDWHLVHLGSRAVGGAGLIFTEATAVTADGRITAQDLGLWNDAQIEPLRRITRFIAAQGAVAGIQLAHAGRKASTHRPWIGKHGSVKPEEGGWVPVGPSPIAFDPNHTQPKPLDEGQIQQVIADFVAAAKRALTAGFEVVEIHAAHGYLLHQFLSPISNQRQDHYGGSFDNRIRLVLEVTKAVRAVWPEELPLFVRVSATDWVEDGWNPDETVELARRLKDLGVDLIDVSSGGTAANAEIPTGPGYQTRFAERVRKESGMATGTVGMITEPAQAEHILRTCQADIIFLARELLRDPYWPLHADDDLGGRKATWPAQYQRATHRDQPIHESDLRD
>NZ_CP023969.1|WP_032893242.1|244256_246158_-|potassium-transporter-Kup
MGQASSQAAGAEHSKAKPIGMLVAAVGVVYGDIGTSPLYTLKEVFNGGYGVQVNHDGVLGILALIFWSLIWVVSIKYVLFVLRADNQGEGGIMALTALARRAAGTRAKLRGFLVVCGLCGAALFYGDSMITPAISVLSAIEGLELAFDGLEKWVVPIALVVLVALFLIQKHGTDRIGKLFGPVMVTWFLVLGGLGVYGILQQPEVLNALNPAWGVRFFMVHPGIGVAILGAVVLALTGAEALYADMGHFGRKPIARAWFLLVLPALVLNYFGQGAMLLGDPEAARNPFYLLAPSWALVPLVGLSTMATVIASQAVISGAFSLTRQAIQLGYIPRMHIQHTSSAEQGQIYIGAVNWSLMVGVILLVLGFESSGALASAYGVAVTGTMLMTTILVSAVMLLLWKWPPVLAVPLLLCCLLVDGLFFAANAPKILQGGAFPVLAGIVLFVLMTTWKRGKQLLVGRLDEGGLPLPIFISSIRVQPPHRVQGTAVFLTARPDAVPHALLHNLLHNQVLHEQVVLLTVVYEDIPRVPAARRFEVDAYGEGFFRVILHFGFTDEPDVPEALKLCHLDDLDFSPMRTTYFLSRETVIASRIKGMARWREVLFAFMLKNANGNLRFFKLPVNRVIELGTQVEM
>NZ_CP023969.1|WP_098949382.1|246571_246895_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MYEVKHVLSINGVDIYQAWLDTVQDTRSKARITTRVDRASLGHFGITEPVGDGVFEMKLDFGPGFRVYYAVQDRKIIFLLGGGSKARQQNDIDQAKALWKSYKVQQK
>NZ_CP023969.1|WP_032893244.1|246891_247227_+|putative-addiction-module-antidote-protein
MTIRTRPHEDSVLEMLRNDEAFALEYLSVALEEIDEAGGEDAFLVAIRRVAEARGGMLSLSQNTGLNRANLYRSIGVGGDPKLSTLLKVLQALGVGMSKVVSHRTEQDIQA
>NZ_CP023969.1|WP_169855583.1|247422_248751_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVPPRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPELIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKPGDKVWCTVTDADEYDLWAEKRD
>NZ_CP023969.1|WP_032893246.1|248851_249322_+|GNAT-family-N-acetyltransferase
MRQHSVIHTPKTSDYARLVQIWEDSVRATHHFLPDSYIELLKNLVLTRYLDAVMLICTKDSRQRINGFAGVSAGKVEMLFIDPHYRGQGLGRQLLGYAIEHMNADELDVNEQNPQALGFYLKQGFEVIGRTEHDGLGQPYPLLHLRLRQQQQARNA
>NZ_CP023969.1|WP_003189059.1|250064_250775_+|rRNA-pseudouridine-synthase
MTDPIRLSKRLIELVGCSRREAELFIEGGWVSVDGEVIDEPQFKVTDEKVELDPEAKATAPEPVTILLHAPAGVDAETAMASISADTLSEEHRFGKRPLKGHFLRLSASADLQAKASGLLVFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGLTYKGKELPAVKASWQNENRLRFAMKNPQPGVIALFCEAVGLKVIAIRRIRIGGVSIGKVPVGQWRYLSGKEKF

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Crispr_ID: NZ_CP023969_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_4

418782-418877

Orphan

Consensus_repeat	Method
TCGCAGGCAAGCCAGCTCCCACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_4

>merge|NZ_CP023969|4|418782-418877|CRISPRCasFinder
TCGCAGGCAAGCCAGCTCCCACAGTTTGATCGCCGGGCGGCAGGTAGATGAGTGTCGACTGGCATGCCGCCTTCGCAGGCAAGCCAGCTCCCACAG

>NZ_CP023969|4|4|418782-418877|CRISPRCasFinder
TCGCAGGCAAGCCAGCTCCCACAG	TTTGATCGCCGGGCGGCAGGTAGATGAGTGTCGACTGGCATGCCGCCT
TCGCAGGCAAGCCAGCTCCCACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949469.1\|429227_429986_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP023969.1\|WP_003188912.1\|398469_398742_-\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
NZ_CP023969.1\|WP_098949467.1\|422216_427076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893364.1\|428739_429222_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949461.1\|404979_406110_+\|OpgC-domain-containing-protein	unknown	unknown	gnl\|CDD\|378405
NZ_CP023969.1\|WP_098949471.1\|435452_436220_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
NZ_CP023969.1\|WP_032893353.1\|400574_402194_+\|FMN-binding-glutamate-synthase-family-protein	unknown	unknown	gnl\|CDD\|239202
NZ_CP023969.1\|WP_098949470.1\|431317_433840_-\|CS1-pili-formation-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|374266
NZ_CP023969.1\|WP_032893352.1\|397069_398449_+\|response-regulator	unknown	unknown	gnl\|CDD\|236901
NZ_CP023969.1\|WP_078802544.1\|434946_435456_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP023969.1\|WP_098949464.1\|413661_418260_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893367.1\|433955_434453_-\|adhesin-major-subunit-pilin	unknown	unknown	gnl\|CDD\|367947
NZ_CP023969.1\|WP_098952565.1\|399435_400263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_044272099.1\|411930_413343_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP023969.1\|WP_098949462.1\|406209_411318_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949460.1\|402434_404693_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185053
NZ_CP023969.1\|WP_098949468.1\|427451_428696_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098952563.1\|395255_397073_+\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|214643
NZ_CP023969.1\|WP_098949466.1\|418971_422070_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP023969.1\|WP_098952567.1\|430046_431141_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_003188912.1\|398469_398742_-\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	9.42067e-49
NZ_CP023969.1\|WP_098949470.1\|431317_433840_-\|CS1-pili-formation-C-terminal-domain-containing-protein	gnl\|CDD\|374266	pfam15976, CooC_C, CS1-pili formation C-terminal. CooC_C is a highly conserved C-terminal domain on fimbrial outer membrane usher proteins like TcfC. The protein is required for CS1 pilus formation.	6.45096e-22
NZ_CP023969.1\|WP_032893353.1\|400574_402194_+\|FMN-binding-glutamate-synthase-family-protein	gnl\|CDD\|239202	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant, yeast and bacterial pathway for ammonia assimilation. It is a multifunctional enzyme that functions through three distinct active centers, carrying out L-glutamine hydrolysis, conversion of 2-oxoglutarate into L-glutamate, and electron uptake from an electron donor.	0
NZ_CP023969.1\|WP_098949461.1\|404979_406110_+\|OpgC-domain-containing-protein	gnl\|CDD\|378405	pfam10129, OpgC_C, OpgC protein. This domain, found in various hypothetical and OpgC prokaryotic proteins. It is likely to act as an acyltransferase enzyme.	2.56904e-112
NZ_CP023969.1\|WP_032893352.1\|397069_398449_+\|response-regulator	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	2.57421e-59
NZ_CP023969.1\|WP_098949466.1\|418971_422070_+\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	1.95989e-62
NZ_CP023969.1\|WP_032893367.1\|433955_434453_-\|adhesin-major-subunit-pilin	gnl\|CDD\|367947	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit. Fimbriae, also known as pili, form filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometres. They enable the cell to colonise host epithelia. This family constitutes the major subunits of CS1 like pili, including CS2 and CFA1 from Escherichia coli, and also the Cable type II pilin major subunit from Burkholderia cepacia. The major subunit of CS1 pili is called CooA. Periplasmic CooA is mostly complexed with the assembly protein CooB. In addition, a small pool of CooA multimers, and CooA-CooD complexes exists, but the functional significance is unknown. A member of this family has also been identified in Salmonella typhi and Salmonella enterica.	0.000869717
NZ_CP023969.1\|WP_044272099.1\|411930_413343_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0
NZ_CP023969.1\|WP_078802544.1\|434946_435456_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	5.72441e-17
NZ_CP023969.1\|WP_098949460.1\|402434_404693_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP023969.1\|WP_098949471.1\|435452_436220_+\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	2.7823e-86
NZ_CP023969.1\|WP_098952563.1\|395255_397073_+\|GHKL-domain-containing-protein	gnl\|CDD\|214643	smart00387, HATPase_c, Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.	1.11343e-21
NZ_CP023969.1\|WP_098949469.1\|429227_429986_-\|pilus-assembly-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	5.16937e-10

>NZ_CP023969.1|WP_098949464.1|413661_418260_-|hypothetical-protein
MMPLDTSADSPRQTTLEQIETLFREPPSLLVVAQDSAQAYLDQHLGTGIWRAGLIYIGTPNDSDGTLAYQSLAERVVQRLASAKTMLLVPEFHKVVQRRREVFEPGGPALAQLEPLINRCGALLLGAYAQRLQAWWREALPVEMTRWGYLSDDLLALLYDSPKPPGLSQVQFATLFPRHLLHPVRPDRQWNAQGEALRVQALYQPGPDGPQMLPVLVLSHGQQALVFSPASGIHPLARLDDVAALLPAYGAVGQWFVQDVEGDPFDALAASYLAQQLRDIDSIDRHQPLLSGQHQRLLDHITDPRRWFVASLTPLQQTLRSAMPNWLAQADDADSIAYARLLQNLVLARQRSNGQHFLDGIDSIRQFADNALQTCLHTEPAAQKLRAQDIQLTFNREVAAAVPVEGGFIAGEVDPVTLTLTELALENLAGFPHTASDITLKGAKAPKWLTYSLLQRCVTKADVGQAYPDLLKKKLLDDPQESARRLQLFQAQLRVQLPMLALALKIKAEQGLTEAGFQCVHAALQASAAQRKVQGRAMAVWPLAFKAAPGAVTDEVTNQFIIGPRDESVGVHLLYRPLLTPTLQAFVSIRALLDAIKAPGALQDQVLAWLAPARQAVYAHGGFNEPHIRHFLPGDEFTAYEKPAPVQLSKQLSTEDPARLIFHGTAKALVALADRQSVSNAEQRWVQLKQAGWLLLGAVLPFAGEPLMLGGWLLQLVDSLQSDIQRLASDDPQAKSAAVMDVLTNLMVILAHQAAPHDPLRPLQLEAPVFASLARPESSPPVPTQVPVPMRFTAPAGWANARGNLNAAQIARARGLSLRAFSGSWAGAEQSGPQRGLLRDTSHTPAQWQALIRGHLYRVTVKAGAVRVVSADGSTLGPWLKPLGEGQWDFDGQLRLAGGNADAAVDAKLKAGEASLSSLAQQYREAGRRRARANATMEVARHLARETTSKVSEEQRATLRERYRKELQNKVQCSQEELQLLMRMREIKPRPHYEQELCEVLESLILSLRLLDVHMREQMAQINDRIKPLLEVLENESEDEAGSDLNRQAHADLDLRMREQVDAEESAIHWRTLERAYLDQLQAVPRLGRNKARALAADVPARPSILDLQALQLVTLWGITISIEGPPLEEEFFDSFNQVINRARWASRSLAELENMPATHEERVELLKSFSHVYATTDDHIHFWRAMAPDTFDLANLEKLQALLASLHQHVEQALADLLAPPPGTRPAKPAQATGARQKKIIRTRNRDVYVARIKAPTQVGDTGTAELVDNKGTVIATFTEAQDGVWEPLEPPARPRVANPQLGALMNKGQRLLADVDKAIDNVQAMTGKCEPQSLQALLAAQANSRRMLAADIDSKLRQLDVSRLAATQQVNARVRASDLRAAAVRLDAAGVQARVHASKLKLSSAEDVDFLHSLNEVRIVRQGARVPIKGKPRDFLQVYAVVDSHTGQPLCYAHFHYDSRVGPDDHYKDDAAHLKSPEQERLGRQAQAEVEAQAFARIRTGQTGRVRQTLEIERASISRRLARRLFFSVD
>NZ_CP023969.1|WP_044272099.1|411930_413343_-|amino-acid-permease
MPVGKPLPPGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTPRWIWALAALISMGTINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISNLWTHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEARNPQKTIPSAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVITAALSSCNGGIFSTGRMLYSLAQNGQAPATFGTTSSNGVPRKALLLSIFALLLGVLLNYLVPDQVFVWVTSIATFGAIWTWLMILLAQLKFRKGLSPAEQAGLKYRMWLYPVSSYLALAFLVLVVGLMAYFPETRVALYVGPAFLVLLTVLYYAFKLQPSDAAVRSAG
>NZ_CP023969.1|WP_098949462.1|406209_411318_+|hypothetical-protein
MTPLNLSKSLRQDGDRLMTTALIEHLKAPHSTPSETLSIPAQCSLGNWWQVYRQALERPRFLDWAQRQSLNLADLRVRNGTLHTQGKTFTLDDQSDWYRLAPPVLAITQVLDPDALGLPVPDEHLALSVRHILRFYGYPQPSTRAQRGAVIDALSHLQSFFWRAEPPLSEAFQQLEQDRQTVAQQLLAGITAQDEDDRPFSLFTLYRTRCWLTSGSFWARSMEAAAALLQGITAHPQFLALDQTQDLVPGHYFFDVTRQSIKGAGPSGTPLEIHYEQLAQLPLEGALERLQDLANAMQLSISLDGKFNLAQLLTLHELPLPDTREAAWDLIEQLRTPSPINVPPIDDQADSDMAIQEHRQWFTAEHERDNLAHAQGIQPEWAMPVKPRLGNYWEGLGLPQPGALTLSAEQRLRVMNITRKFLPQPNQGLLELLINDPLPAPPDEQLQQLLAQPTAQKLADQLIDALQWYGHGPGQLANRSSRDTLLLSALILDLDPQAGQSRYTIVGLNLNQSDCWGHRYADLRRTVELHLIQSGVATSRSTALAAHLLLAGIAPEFLVGQLPDSLYFMTSHAWLLLKQGVMLAEALVCGSSRHLRFSDIVALATQELDAAEQPLWRTHYTTSTLIDWAVAQGQLSPVNEHSTYSLQSINTLQNTLIERVDTLGDASRTLRTPLITRRRIALNDLKKIFRGNRLLKKKCLRWAQGPQRRPSHLPAPGAHLQSLVDLHMSGALQPLAEQWNSVDPALDLAEMKQHFRRLGDVNTLFNEASIAHVAQLKEAYTTVIRYLLAQLPLADREHLQKAAVQLLVVRRPANKPQIEEQPGEKMARTGRFGVILRCEALNGHHDYELFPLLNLAYKNVRLPHTLELGGTPFTIQTGNVHSTQPTSQLHIGSLLALDETAYLTGSPPRADQSSSVIIDRLWRVEATEATTQALTFDSPRALTLAKAIVNQHFFQDIDTLVAQARGSTLLEDRQKTAEAVYQALLGLIPLWSCTRDLASGDTKRMIEGAYGCFFDVFGLLAPTKGLVLSSIARLGKGAPAYIKLLQLTKLGATYLNAVFNPFDSLPSVLRLGRHGLVHLNQAGMRALEGAIRHTRLRLNPGPSVDYTRLLNSADIAPATLTRADGVAQVLAIKRSSAWYAFDPFSARPYGPPLADLRLDTAITVIPHQSVGGYKARITEPLFKKPALLIQRANATDLLDQNRVWRLPHDAQTHMDELTSPVHAWHVDTFDHLCAIRRKKRSLIPIVCFTKRLYEFAHSIHLRRVQALDHVRLIPAPVIDGQKRQLVYHRRIHEVTPRVTEFELTPLPASTPLTYKTNVIGRRIDNEPQFGLPGDDFDNVLSRQTQVVELNGIVDGINDSRTLRALLVSVPGKDHWVVEADVGVFYRAPATTTGSSVVHFEQLDYSVGGEHVALIDAFGERKNQFLKAAQLIPDQPLVALPTLEVLYRQLAHRGFSAEKIALLRKRVSGLRTIKQRELLLNLSDQGRSLNINFVSRPVQLDIWPPRPGTTPHPSPAQINRYLAEQANASTAALVERTQLKSANVQGPTLDELRRVQEAQSVVMWEYSKIGQPNYTEIILKTGAGNCDQMAHVACEMIRTNGGTAQVWVCQVHTFVVVGTIPTGLSQTLDFQETGWADLWISDPWAAITCPAKDYMRTLEIKMITWDLEDILVFFYDGKAYRWERANHPDWLRLLLTTTKSPKP
>NZ_CP023969.1|WP_098949461.1|404979_406110_+|OpgC-domain-containing-protein
MLNGRDPRIDFFRGLALIFIFWDHVPHNPLANVTVQNFGFSDAAEIFVFLAGYAAVLAYGKILQRDGYFIACLKILRRVWTLYVVHIFLLALLMGIVIFANSHIETRDLVQEMGLEYFLNNTQQALVDELLLRFKPNLTDPLPLYIVLILSLPITLPLLLRAPTITVAISLAVYLLAPWQGWNLPASNGGVWYFNPITWQCLFILGGAAALRSTPPPERQPLLRQPLFIAAAAYVLTTCVITLSWRWPEVHDAWMPRVIGEWLYPISKTDLSPVRLLHFLALAYVTAKLLPGVGWTQQGLARQLVRMGRYSLEVFCLGVVLAPLADMVNALTGDTFAMQVFTALVGAAVMSLFAAWLEFNKQLDQRRATLPQSPAT
>NZ_CP023969.1|WP_098949460.1|402434_404693_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MPIHVASLLLACLPLLALAQDDPVERLLTQMTLEEKIGQLSQLGIQATPTGPAIDQGTQTQMPVTLVGSVLGASTAQQTRQLQEQVVNGSRLHIPLLFAYDVLHGFRTVFPVPLAQASAWDPDLAQRTARAAAVEATASGVHWTFAPMVDVTRDPRWGRVVEGAGEDPFLGSALAAALVHGFQGAGAPDISSMLATAKHFVAYGAAEGGRDYNVADLSERTLREVYLPPFQAAVAAGVDAIMPSFNELAGIPMHRHTALLAGLLRKQWGFTGLLVSDFNAVWELGPQGIAATAADTARLAFTAGVDIEMASQSYRQHLPTLVRNGQVSRKSVDDAVRRVLKTKQRLGLFDDPYRYSDEARERANQLTPQHRALAREAAQKSIVLLKNSGPLLPLSKQPGKVLVTGSLASDASATIGPWAGAGRAEESVTVLQGLRNAVAPGSEIVYLPGASPSSPHVQDIKQVEHTARESDLLIAVLGETAEQSGEAHSRAELGLPGGQNALLSTLLNTGKPLVIVLMNGRPLVLDESVQQAPALLETWFLGSETGNAVADVLFGDVNPSGKLPMTFPRHVGQIPIYYAHKNTGRPPSGDGSYASAYIDVPWTPLYPFGFGLSYTSFVYSSPRLSSPRLTSTQTLAVEVTVTNTGKRAGDEIVQLYLRDDIASVTRPVRRLRGFRKIHLAPGESRSVSFTLGQPDFALLDEHFSPKVEAGSFTVFVGPDSATTNQAHFEVSDTRGLPIAGSLSHRRCPLRAQ
>NZ_CP023969.1|WP_032893353.1|400574_402194_+|FMN-binding-glutamate-synthase-family-protein
MSLSLLSRYAFFAVCVIFTLASLPFIEHEWLWPITIVTGVLSLIGIFDLLQTPHAVRRNYPILGNIRYLVETIRPEIRQYLLESDSDALPFSRAQRSLVYSRAKNETADKPFGTLIDVYQSGFEFIGHSMRPAPLSDPSSFRVMVGGPQCTQPYSASVFNISAMSFGSLSANAIRALNHGAKLGNFAHDTGEGSISPYHRENGGDLTWELGSGYFGCRTSDGRFDPERFAVQAQDPQVRMIEIKMSQGAKPGHGGILPKHKVTQEIADTRGIMMGEDCISPSRHSAFSTPIELMQFIAQLRELSGGKPVGFKFCLGHPWEFMGIAKAMLETGILPDFIVVDGKEGGTGAAPVEFTDHIGVPLREGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDIASVLAIGADWANSARGFMFAIGCIQSQSCHTNKCPTGVATQDPLRQRALVVPDKAQRVFNFHRNTLHALAEMLAAAGLEHPSQLSAKHLVRRMSATEIKLFSQLHVFLKPGELLTGEVNGEFYSRMWQMARADSFEPHEIAAA
>NZ_CP023969.1|WP_098952565.1|399435_400263_-|hypothetical-protein
MPSNPHWSKSQLTGLQREQVAQEHKRMQGIEKPEQDVSRKPEFATGRPSGDNRIAEQIINDNPILKNLGHQKDINRPLAYKLLGDWTSNNKAPEARADAAFNAARVLNYIDTSLSADGEHRGKAHGNGDLEGITRSGDARRGTPAGMWKDFTEQGYSALRDHHRLDSTSDTHVKADGTNKDNLQWVAGEAGKRTWFIPGLSNVLLGIGNADQGGGGALKGAKDGFDKTRVDGFDQALASAARGNIWGVVKGYASAVNKNEATPEQVKTVLNKVGS
>NZ_CP023969.1|WP_003188912.1|398469_398742_-|type-B-50S-ribosomal-protein-L31
MKAGIHPDYRTVLFHDTAADVFFLIGSTADSDRTHKHSDGNTYPYIPLDVSSASHPVYTGQQRKTQAEGRIAGFNKRFASFGSSPKKADE
>NZ_CP023969.1|WP_032893352.1|397069_398449_+|response-regulator
MNQPPNRRILLIDDTPSIHEDFRKILMPDEASTEALDEMESALFGDAAKPQAQAFELHGAYGGEEGLALLTSAMAQQRPYALAFVDMRMPQGWDGAKTIEELWKVAPDLQVVVCTAYSDYSWDDLLFRLHAHDRLLILKKPFDNIEVQQMANTLANKWDMARRASLQTSQLERLVEERTQALQLEIEERKHLESQLVQSEKLASLGQLAAGVAHEINNPVGFISSNLSTLDGYFKQLQQMLDAYQRSEAHIAEPEHRDPLTALRNELDLDFLKDDIPILIRESKDGIGRVVQIVKDLKNFSRVDNDQTWQFANLQQGIDSTLNIVASELKYKADVVKHYAPLPEIECLASQLNQVVMNLVINAAQAMGPERGTITISNGVEGEHVWLEVADNGCGIAPETVQKIFDPFFTTKPVGEGTGLGLSLSYGIVKKHRGDISVSSELGKGTKFRVVLPIRQTAA
>NZ_CP023969.1|WP_098952563.1|395255_397073_+|GHKL-domain-containing-protein
MRPLSRRRTSQILLGLITLFLASTLVFLYLKSSRDQTATYTQSRDLIRQLQQLNAQWDSEVLKARIAITHNYDPLVTPLTEMTRIGAELQSRNTYHSAADLPGWQASYAAYLKAIEEKARLVDQFKSHNAVLRNSLAFLPTAEDDIQAQFNSMTDEGRLQLQSVATDTYDLLLSSLEFAQVTSDERAADILVGLGKLAINQQSLPSEFQAPVEILSNHISLILREQPLVNSLLERIAAVPVAEHLDDLTTHLNQDQQAADLIDHQYHRYLLIFSTLLVVLLLYLAVRLLRSFAEINRVNRALQAANETLEQRVERRTQQLKDAQSELMDSARQAGMAEIATNVLHNVGNVLNSVNISADLVSRKLRASKALGLGKAMQLINAHPGDLGTFLTEDEKGKLLPGYLNQLVEAIAIEQQGMSDELAQLSKSVDHIKDIVSTQQSYAGASTLLEPVNISALMDDALRMNAGALSRHHVTVVKAYSPVPEILADKHRLLLIMVNLISNAKYAMDKLSERPRQITLAVESVGDETLKISVKDDGEGIPPENMARIFTHGFTTRKEGHGFGLHSCALAAVEMNGQLSAHSDGPGLGAVFTLTIPLTLAGSSS
>NZ_CP023969.1|WP_098949466.1|418971_422070_+|penicillin-binding-protein
MGALQHTNATQADLDPDSPSPAPLPKKTRPWRRVGWLIVLMALIALAFAVHREVQTSRWQARVFSDWAAKLTYQVAPGASDAMVYPGAGPFDQRLGYSALGEFLPRLLKRNYMIESQARFSEALMDYSRHGLFIPYAEKIQAGLTLTDCRAAPLYQFNYPTQLYARFDDIPPLMIHSLLFIENRTLLDPEPAQANPAVDWPRFAKAAWSQVARQLHLPGQAAGGSTLATQLEKYRHSPDGLTLSGSEKIRQMLSASVRAYQHGPDTLAARRNIVRDYLNSVPLSAVPGHGEVHGMAEGLRVWYGADFAQVNRALQDTATTPASLAARGLALREVLSLMIAQRRPSHYLANGRDELKQLTDSHLRLLAQNAVIDPPLLKAALAARVTYRDWLQQPTLQPIDSNKGVSVARSRLAALLNRPLYDLDRLDLAATSTLQAELQTQVTAYLKQLADPVFAGNIGLLGERLLTPASTPQVRYSFTLFERTADGSRVRVQTDNTDQPFDINEGSKLELGSTAKLRVLTTYLQIISELHDRYATQTPATLKKADIAEQDRLSRWAIDYLLQAPDKSLAAMLEAALDRTYSASPNEGFFTGGGMHYFHNFRNEDNGRSPTLRDALRESINLPFIRLMRDLTRYVTYAGANNSAQLLKDDGDPRRQEYLARFADREGTTFLLKFWKKYQKKDTQARLETFLDSLHPTAIRLAAVHRYLFPEATPDTFNRFVRSHLTGVKTNGALSDERLQRLYKDYGPGTYDLPDQGYIAKVHPLDLWLLGYLLNHPQATFTEVVKASQFERQEVYSWLFKSRHQGARDSRIRTMLEVEAFLDIHQRWQAVGYPFDHLVPSLATAIGSSGDRPAALAELMGIILNDGVRGKVLRIDSLHFAAGTPYETRVVNTPDPGKRVMPSEVASALRGALSRVVDAGTAKRVSGSFTQADGTPMAMGGKTGTGDNRIQAMGAGGRLISSKSINRTATFVFFIGDHHFGTLTAFVPGSSAQGFKFTSALPVQVLKGMAPMLMPYLKPGNQTLCQPSVSTH
>NZ_CP023969.1|WP_098949467.1|422216_427076_+|hypothetical-protein
MSLLPLPPTEDLLRRLPVCLTAIEHLLDAQPNVATLMAAELRQALANLVPGNPLDPDAVFLNEYEYAPPATDASESLTREPRLTRARNLRQVLEEAIATGRKPTERTKEPQTGTIEQAVGFYSRPLDTGRNGEITALEVTAFNQLIDNLRHDSLALYSRRLEVFWTSVQAATGALSVFEAISQKQREVFVLESDLKTHDALQQVAQAEQALQDKPTDAQALADVTTAKAHLKVHTEGRQLIDNLVLHETSGTATRPQAVTITLYSTGSPEWSATLNGCFVLTERLHGSRATVLYTPQFGVEVFQHFPAMENTLRRRLVAGAEKSRLLTNIALSQRGVVDEGLRSGQNLRYTPITGPVFSASLQAQRDQQDADIDRAFSTAHTTFEALATELSATLALPLKGGPGLRARLPEPVDPMTTPALAHTSPVPEQQAQLIQLWNSLNQQIDYILAPHKHPSLEGVLSALLKETFAQLPPETKPSGLYVNRYRTDSGGQRHFESSQTLLEALCTLLRGADEPQDQASHTEGVFSSATAFSAADQIPYTGTLTTLAETLLAKLTTHITTYWHTPIAPELACPQARLTEVHRQVLDVQARLGMADNTLSPQAKLLIDRALRYPTLARREAAFGHGNRPGVYQLTLNTGDAEGVRLAGSFVLTASDDSRPTLPRWPYGHKNLSTRRTVAGTIVLYTPNQGFEEFASLQALHDTLKTRINTGEDTGRLLVTGLPLLVLRSKTGLWGSDLRDTFAPIESDFVADNIQALLDKQQSDIEAILSLTEGEPDTQSNGLAELVELLDMAEAFVARNQRLLKHWRPDWEKRLSPQDKKALQDQARITDEKQNELGKQWHALIPTLAAYAKQQVLLKIRAFLPDYPAQGIDPDQTMVIRTTRTRVSAGAGFGSTHEAVASTRISLTNLLLKNNKPWEQSLTWTEDDLLEATLITSQGKWVTDEKGKAITVGKERLEQWVEELNIGHEYTENILKKHLDPQATTADAQALKKAWMASQAAALDYAAMLARLSPDAYSTALASDNLQKKAAAWMAAVLAAPDPKVRQPVDGQTIIANALVFNPTGTAPDGRGGQTVNGILLLSTAADATLVLYTPHAPDGLELREIANEAALIKLMHSSAWQAYLKARLPAGTRLLNHRLVAYTGDVLAGLYRQNYLYLLEKTDTESVTNEELAYQSLFNKVMFGVEVATTVLSGFPWGGQLTSSAFRWLGRMGQTTVQSLRKVGQNVAGLIARHAGKERVLFEIATATTTATGAARTAGIGIKPLQILLRPARNMPKPDLTTYERAFQQASPNLVVKGGIPAGSSLSEGTGIYRTPDALRTLLVRGVDGKGKEQVFRIQDSFNLYDPNGLVAPVLTPSGGFTPFKLRKLANQRWELDTLNRLPGGTPKVESALTLALREWEAHVAAQAANPLTTLDPTTFFRNRAIPLKTWNKVVRLTGEINTAGIARLRPVPTQGYAKFTDDLFNTWVGLGDETQAAADAFFRAHRINPTVWKIYITTKGKLTPVGLTRSIRLANLPSGKRSQITDQHLLDWDKLYLRPQTPRTTPVTKADVTTYAFDNHIHIDSWMKYVSPKDGTFLRHNPTQVKRLERLGIPVTPAQTTPIDYSRAGTSAQPLV
>NZ_CP023969.1|WP_098949468.1|427451_428696_-|hypothetical-protein
MQLITATKKWLGPWALALGVGWASLPVQALEQHISAVFRPDPTNPMVNKFQNTTPHSGICAWHVPALCESLNTFSIRTDALAFDSIAPIEANHEDPRKGAYFKVPSAWRDVQVRHVATGEIETVQVRIAGFGGRWSLGGGARVSVWTNNGYAWNYPWLYGMGPCQGVRYIAAASTYALYFWTIPENAGACNVVPGAPIPRMRYNPVEYGYELKTPNPLGMASGEYRGSVTYSIGPGGDFDLGDVMMPNDNTLTFNFTLSVEHNLKVDLPPGGNRIELLPEGGWQAWLNRGRQPAKLFRDQTFVISASGRFKMQLECSLAIGNTCGLRNGAGDEVPLQVGVTLPYGLQDQYGQAVNKLPLRLDGSGTELFQPGYYVNNRPASLHFAVERDDVKEMLKQPGSTYTGVVTVIWDSEV
>NZ_CP023969.1|WP_032893364.1|428739_429222_-|hypothetical-protein
MFKQLTALAVLMTPVFLGEPAQAFQERHSFDVSVTIPIEEAYVLPSEPDWMGHDQVLAWDLATARLGRLRKNFDVKNINGGVTARLGDMPYLLSGRNRIDLQVLFNRVPLTLDSTQVLNADEARTGRRAELEISAIEPQDGYKGGDYYGTVHLMFDFPAP
>NZ_CP023969.1|WP_098949469.1|429227_429986_-|pilus-assembly-protein
MKHAVLSVGLLLLSLTAQAGPAINVGVVYDYLEGDRSSYLKRVYNGGTSTAFIKVNVLEIVYNADGTSREVPVASMTDAKGAATNRDGLMASPARLIVPAGGRQGTRLLYMGQRDKERYFRVRFIPVVPEKEDDFAVTDEERADYKDALAAGVNVMAGYGTVFFVRPQNTRFDTQISQTANQYTLRNAGNSVVVLDEFRDCSVVKKTDCEATTKHHILPGRQLVFEKKPERQFSFQLIEGRDKKPMTVNSNG
>NZ_CP023969.1|WP_098952567.1|430046_431141_-|hypothetical-protein
MVNRFTNTTPQSGVCPGHMPARCEALGIFSIRTWDINFVASGPIAANHADPRQGLMFKVPSEWRSFEVVSPKGDRKTVEMRISGIGSRFNTTNPPGVYAWSPLPANWTHAPSPCQYTGMWAAAPTLRLWFWLVPEGAGACNLVTPFDVPSSSFSMLEYTYELRTPNPLDMDAGQYRGSITYGVGPHQDFDFGDIYQPNDDVLTFNFDLRVEHNLKVDLPPGGNRVELLPEGGWQAWLNRGRQPARLFRDQTVVISASTRFKMQLECSLAIGNTCGLRNDAGDEVPLQVGVTLPFGLRDQYGQAVDKLPLRLDGSGSELFQPGHYVNNRPASLHFAVERDDVKEMLKHPGSTYNGVVTVIWDSEV
>NZ_CP023969.1|WP_098949470.1|431317_433840_-|CS1-pili-formation-C-terminal-domain-containing-protein
MFPMTPIAAALALLMCTSALAAPAASGALTTGSLLSQAQGLPAGFTDHFFDVPLAVRIDLDQQLLGEALIVLTRDDRVTLLEFTDTADSKVPAATRDTWQALLEKGVALGTCTQSCPEKMLSAFYNLENSQLAIITQNVELNDDAPRFYAQPEGGSLGLIVNNQLNLNGGQDNKLGGRYGLQASSSVGNWSQVFNLQLARQSGDNEQMRHAIHELYTQREMQGQFFRLGHFTPNSDGLTRQLRSFGASPDTALGLMYGSSDSLAINNAKPSVYPIYVTANRQAAVEIYRNGLLINTQAVAAGLQTLDTRPLPGGIYEVEVRLVEDGLTTSTTQELVYKPSNWRNAEDPWRYNLFAGRETKLFSNWDEQASGAMTAGASINYLLHPRVILGLSARQVREQLQYGGSVDWTVANNTSLYTNLYQTQDHGTGMDLQALYTLGATNLVFSHNRSWLDTRDTYETLPDGTRLRRNTFVGEASNTALSVNHRLDAKNTLNMRLSHSEGNVEGAGIDLGWSRHDNLFGSDANWRFSVFDRPGSAGTNDRRNRGVDVSVSVNLGRDGRQISGSIGTRTARDGGRDNNASVTLRQDLTDHFLQSVSATAITDTYGVGLSGMASFSTDAVSGDGFVQRSSFNGDLSGGLNLNSTLVAGAGKVLLSSQYQGNGAGMIIDVETDLDEIALRADDMGGGSTLLRPGRNYVPVSAYKSSSVAFDFEGNHPPAANIQPARSSYHLNKGGVDYRKVSVMKTVTVLGRLLDERGAPLRGHHVINHASRGVSEVDGFFSMEMSSSSPTLQVRYQNQLLCQFRLDPSNAPSESDVLMIGDLRCTPDTLAEVAHASEAAG
>NZ_CP023969.1|WP_032893367.1|433955_434453_-|adhesin-major-subunit-pilin
MFKKFAVAVPLAVLALSSSVTAIAAGEASHTVNLKANIPTTVFHAQPRDPNWGRDETMTYNLVSGELAPLSAIYDVKNTNGSVAAYIEGGPAVLFNGDAAQNIALTTTFNGVTLTGSPQEVVNEADSTPGIGAEMRIVAAKPSANQRGSYTAVMPVVFDAVLPTP
>NZ_CP023969.1|WP_078802544.1|434946_435456_+|helix-turn-helix-transcriptional-regulator
MKHEHRGEFEKRGGRGPRVFAPGDLKLLLLSLIAEQPCHGYDLIRRIEGLFDGAYSPSPGVIYPTLTFLEESELISGDADGGKKRYTITDPGRLFLSEQAVALDGVRMRLDVSKRSLRGHDRPPEIHEAVHNLRHALHSHNGHWSPEEIIRVAALLNRTAQAIADGTDQ
>NZ_CP023969.1|WP_098949471.1|435452_436220_+|siderophore-interacting-protein
MNTQTIHRVTHEIKRRRLQVLRVVDITPRMRRVTLGGPELAGFISLGSDDHIKLLFPQNAQEQAALESPTFNIKGDGPQPAMRDYTPRRYDLSIGELDIDFVLHGDGPASTWAEQVQVGQHLYIGGPRGSMIVPDIFDSYLLIGDETAIPAIARRLEELPAGRKVLAVIEIADAAEQQVLSSAAKVEVIWVLRGQDNLLDVVRNLTLPSGTLYSFVATETKLSRQVRRVLLDTHKVDEQYLKAVGYWRAEGSEEE

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Crispr_ID: NZ_CP023969_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_5

512762-512856

Orphan

Consensus_repeat	Method
TCGCAGGCAAGCCCGCTCCCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_5

>merge|NZ_CP023969|5|512762-512856|CRISPRCasFinder
TCGCAGGCAAGCCCGCTCCCACATTTGGATGGTGGTGTGTCAGGTAGATCAGTGTCGGCTGTCAGGCCGCCATCGCAGGCAAGCCAGCTCCCACA

>NZ_CP023969|5|5|512762-512856|CRISPRCasFinder
TCGCAGGCAAGCCCGCTCCCACA	TTTGGATGGTGGTGTGTCAGGTAGATCAGTGTCGGCTGTCAGGCCGCCA
TCGCAGGCAAGCCAGCTCCCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949505.1\|518748_519369_+\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185202
NZ_CP023969.1\|WP_032893436.1\|501212_502016_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|225464
NZ_CP023969.1\|WP_003188807.1\|499689_499950_+\|YebG-family-protein	unknown	unknown	gnl\|CDD\|377779
NZ_CP023969.1\|WP_098949504.1\|518116_518737_+\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185203
NZ_CP023969.1\|WP_098949503.1\|517458_518088_+\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185203
NZ_CP023969.1\|WP_098949495.1\|502124_503477_-\|aromatic-acid/H+-symport-family-MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NZ_CP023969.1\|WP_003188784.1\|514221_514692_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP023969.1\|WP_098949501.1\|512895_513837_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP023969.1\|WP_098949498.1\|506967_507747_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP023969.1\|WP_032893444.1\|514782_515418_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP023969.1\|WP_098949500.1\|509817_512232_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP023969.1\|WP_098949506.1\|519372_520056_+\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185203
NZ_CP023969.1\|WP_032893448.1\|516819_517443_+\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185202
NZ_CP023969.1\|WP_098949494.1\|500005_501025_-\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_CP023969.1\|WP_032893438.1\|503625_504261_-\|maleylacetoacetate-isomerase	unknown	unknown	gnl\|CDD\|273527
NZ_CP023969.1\|WP_098949497.1\|505563_506847_-\|homogentisate-1,2-dioxygenase	unknown	unknown	gnl\|CDD\|235421
NZ_CP023969.1\|WP_098949499.1\|507748_509206_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|224938
NZ_CP023969.1\|WP_098949502.1\|515616_516435_-\|response-regulator	unknown	unknown	gnl\|CDD\|381099
NZ_CP023969.1\|WP_032897605.1\|513912_514185_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP023969.1\|WP_098949496.1\|504273_505560_-\|fumarylacetoacetase	unknown	unknown	gnl\|CDD\|162276

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949505.1\|518748_519369_+\|DUF1120-domain-containing-protein	gnl\|CDD\|185202	PRK15302, PRK15302, hypothetical protein; Provisional.	5.55115e-19
NZ_CP023969.1\|WP_032893436.1\|501212_502016_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|225464	COG2912, COG2912, Uncharacterized conserved protein [Function unknown].	1.50604e-45
NZ_CP023969.1\|WP_003188807.1\|499689_499950_+\|YebG-family-protein	gnl\|CDD\|377779	pfam07130, YebG, YebG protein. This family consists of several bacterial YebG proteins of around 75 residues in length. The exact function of this protein is unknown but it is thought to be involved in the SOS response. The induction of the yebG gene occurs as cell enter into the stationary growth phase and is dependent on is dependent on cyclic AMP and H-NS.	8.05973e-25
NZ_CP023969.1\|WP_098949504.1\|518116_518737_+\|DUF1120-domain-containing-protein	gnl\|CDD\|185203	PRK15303, PRK15303, hypothetical protein; Provisional.	1.2873e-12
NZ_CP023969.1\|WP_098949503.1\|517458_518088_+\|DUF1120-domain-containing-protein	gnl\|CDD\|185203	PRK15303, PRK15303, hypothetical protein; Provisional.	4.90937e-15
NZ_CP023969.1\|WP_098949495.1\|502124_503477_-\|aromatic-acid/H+-symport-family-MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.83867e-94
NZ_CP023969.1\|WP_003188784.1\|514221_514692_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	4.58354e-18
NZ_CP023969.1\|WP_098949501.1\|512895_513837_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	3.73378e-17
NZ_CP023969.1\|WP_098949498.1\|506967_507747_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.36976e-60
NZ_CP023969.1\|WP_032893444.1\|514782_515418_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.49588e-49
NZ_CP023969.1\|WP_098949500.1\|509817_512232_-\|TonB-dependent-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.93512e-103
NZ_CP023969.1\|WP_098949506.1\|519372_520056_+\|DUF1120-domain-containing-protein	gnl\|CDD\|185203	PRK15303, PRK15303, hypothetical protein; Provisional.	7.521e-09
NZ_CP023969.1\|WP_032893448.1\|516819_517443_+\|DUF1120-domain-containing-protein	gnl\|CDD\|185202	PRK15302, PRK15302, hypothetical protein; Provisional.	9.2203e-10
NZ_CP023969.1\|WP_098949494.1\|500005_501025_-\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	3.13774e-81
NZ_CP023969.1\|WP_032893438.1\|503625_504261_-\|maleylacetoacetate-isomerase	gnl\|CDD\|273527	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines].	2.01704e-96
NZ_CP023969.1\|WP_098949497.1\|505563_506847_-\|homogentisate-1,2-dioxygenase	gnl\|CDD\|235421	PRK05341, PRK05341, homogentisate 1,2-dioxygenase; Provisional.	0
NZ_CP023969.1\|WP_098949499.1\|507748_509206_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	3.75163e-117
NZ_CP023969.1\|WP_098949502.1\|515616_516435_-\|response-regulator	gnl\|CDD\|381099	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC. This family is composed of hybrid sensor histidine kinases/response regulators that are sensor histidine kinases (HKs) fused with a REC domain, similar to the sensor histidine kinase CKI1 from Arabidopsis thaliana, which is involved in multi-step phosphorelay (MSP) signaling that mediates responses to a variety of important stimuli in plants. MSP involves a signal being transferred from HKs via histidine phosphotransfer proteins (AHP1-AHP5) to nuclear response regulators. The CKI1 REC domain specifically interacts with the downstream signaling protein AHP2, AHP3 and AHP5. The plant MSP system has evolved from the prokaryotic two-component system (TCS), which allows organisms to sense and respond to changes in environmental conditions. This family also includes bacterial hybrid sensor HKs such as Escherichia coli RcsC, which is a component of the Rcs signalling pathway that controls a variety of physiological functions like capsule synthesis, cell division, and motility. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.40113e-39
NZ_CP023969.1\|WP_032897605.1\|513912_514185_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	5.12014e-45
NZ_CP023969.1\|WP_098949496.1\|504273_505560_-\|fumarylacetoacetase	gnl\|CDD\|162276	TIGR01266, fum_ac_acetase, fumarylacetoacetase. This enzyme catalyzes the final step in the breakdown of tyrosine or phenylalanine to fumarate and acetoacetate. [Energy metabolism, Amino acids and amines].	0

>NZ_CP023969.1|WP_098949500.1|509817_512232_-|TonB-dependent-receptor
MKSTAGGWVKQWLGASVFTVSGLALLPLAMAQAQEQHSAQFNFALAAKPLPQALSDFSRVTGISVIYTDEAPYGINAPAVSGQMSASQALQRLLGRSGFTFRQIDARTLALEPVPTDGAVNLGATTISGIDLTQASTSYQPPPTSSVMRSRGLLLETPQTVNVVPAQVLRDQQPRNLDDALGNISGITQSNTLGSTQDAVMLRGFGDNRNGSIMKDGMPVVQGRALNATADRVEVLKGPSSLLYGIQDPGGVVNIVSKKPELVQSTALTARGSTFGSGKNGSGGNLDTTGPLGDSGLAYRLIVDHEDEDYWRNYGTHRETLVAPSLAWYGDTTQVVVAYEHREFLSPFDRGTAIDPKTRHPLNIPATRRLDEPFNNMEGRSDLYRLTVDHDLNDDWKAHFGYSWNRETYDASQVRVVKVNPNGTLTRSMDGTQGALTTDRFATASLEGKLNVAGMQHDLVFGLDDEYRKIYRADLIRQAPRGVFNYNNPVYGNEVAGSNVSAPDSNQTDLLRSDSLFFQDAIHLNDQWILVGGARYQMYDQYAGKGVPFTANTDGNGQKWVPRAGLVYRYTDELSFYGSYTESFKPNSTIAPLANKTVLDGSLDPEESKAWELGTKFDLPGRITASAALFNIDKRNVLVQVGEGLTSVYSVAGKVRSRGLELDASGQLTDKWSLIGSYAYTDAEVTDDPTLKGKRLQNVAKNTGSLSAVYDFGTILGGDQLRVGAGARYVGERAGDAANSFELPSYTVADVFASYDTQLDGQKVKFQLNVKNLFDRTYYTSSVNTQFVSIGDARQVSVSSTLTF
>NZ_CP023969.1|WP_098949499.1|507748_509206_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MHFGKWFHTSTLLVGLSFLLGGCASVSQTSTPATLDKLLSDPALQGATVSLMVRDARTGTTLYQHNPRTRLVPASNLKLLTTAAAMDVLGPHYRFATQLLSNGIRQGNRLTGNLYLRGLGDPSIQFADYQALAAQLASQGVRQVQGDLVFDDTWFDAERLGVDWSHDDETTYYGAQISALTVAPNTDFDAGSVLVTAKAPLRVGSPVGVEIYPPTDYLQLNNRAVSGPGNSYGINRRHGTNLLQLSGAVAPGRQSQQLISVWEPTQLVANLFEQALAQQGIKVLGHRVMGGASPAGVAVLAEHQSAPLQELIVPLLKLSNNAMSEALLKAMGRQTANNGTAAAGAVAVAGFLKRQGLDTSALSQVDGSGLSRRNLVSSQTLTDLLLAASKQPWFDAWYNALPVAGNADRMTGGSLGYRLRGTPAENNLHAKTGSMAGVSSLSGYITDAHGRKLVFAMLTNNYVVAGAQVKAVENRVAAALSRSED
>NZ_CP023969.1|WP_098949498.1|506967_507747_+|IclR-family-transcriptional-regulator
MEKPRDTGKQKVRSAEVGTDILKALAELSPATSLSRLAEHVQMPASKVHRYLQALIASGFAEQNSATNHYGLGREALRVGLAALGSLDVLKVGALPLAELRDELNETCFLAVWGNQGATVVHIEPAVRAVTVVTQLGSVLPLLSSSTGLVFSAYLPSRETVELREREVQAGTAHTLADDQAYASVCEQIRSRGLHFVHGLLMPGVDALSAPVFNAVGHVAAVMTVVGPTSLFHADEDGPAAQRLLAATRAVSWRMGYQP
>NZ_CP023969.1|WP_098949497.1|505563_506847_-|homogentisate-1,2-dioxygenase
MNLEYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYTELFSGTAFTMARSEARRTWLYRIQPSANHPAFAKLARQLAGGPLGAVTPNRLRWNPLDIPSEPTDFIDGLVGMVANAGAEKPSGISIYNYRANRSMERVFFNADGELLIVPEQGRLRIATELGVLDVEPLEIVVLPRGLKFRVELLDTQARGYVAENHGAPLRLPDLGPIGSNGLANPRDFLTPVAHYEDLKQPTTLVQKFLGELWGCELDHSPLNVVAWHGNNVPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGLANLDFVIFPPRWMVAENTFRPPWFHRNLMNEYMGLIQGAYDAKAEGFLPGGASLHSCMSAHGPDGETCTKAINADLAPHKIDNTMAFMFETSQVLRPTQFALECPQLQPAYDACWAALPATFNPNRR
>NZ_CP023969.1|WP_098949496.1|504273_505560_-|fumarylacetoacetase
MTQPTQTRSWVSSANGHADFPLQNLPLGVFSINGSAPRSGVAIGDAILDLHAALDAFEGEARRAVEATAGGQLNGFFELGRGPRVALRERLLELLAEGSELQTREAQVLHRAVDCQMHLPAKINDYTDFYVGIEHAQNVGKLFRPDNPLLPNYKYVPIGYHGRASTIRPSGTEVRRPKGQTLPAGQTEPTFGPCARLDYELELGIWIGQGNAMGDAIAIGDAAEHIAGFCLLNDWSARDIQAWEYQPLGPFLSKSFITSISPWVVTAEALEPFRKAQPPRPEGDPQPLPYLLDKRDQNAGAFDIELEVLLTTASMREQNLPAHRLTLSNTEHMYWTVAQMVAHHSVNGCQLQAGDLFGSGTLSGPQPGQFGSLLEITEGGKKPIELACGEVRKFLEDGDEIILRARCSREGFASIGFGECRGTVVAAR
>NZ_CP023969.1|WP_032893438.1|503625_504261_-|maleylacetoacetate-isomerase
MELYTYYRSTASYRVRIALALKGLDFTALPVNLLVPAGGANRQPDYLAINPQGRVPALRSDEGALLIQSQAIIEYLEERYPQAPLLAKDLVARAHERAVASIIACDIHPLHNSSTQNLLRKWGHDEAQLLEWIGHWISQGLGAVEQLIGDTGFCFGEQPGLADAFLIPQLYAAERFKVPLAAYPRIGRVAALAAQHPAFMQAHPANQPDTP
>NZ_CP023969.1|WP_098949495.1|502124_503477_-|aromatic-acid/H+-symport-family-MFS-transporter
MHNQIASFRAALDARPVSRYQWLILLLLALLLVTDGYDAQVLGYVVPALAQDWGLEKSAFGPVFSANLLGLTLGSLLVTPLADRFGVRRILLACVLIYASLTVLMVFANSLTTLMAARFICGIGMGGAMPSAMALMSEYSPPRLRTLMVTLAACGFSFGGAAGGFVAAGFIDSFGWQAVFLAGGVTPLLLFPFLVWLLPESLPRLLRDAPPYLRLRRVTARMLPDWQPPPATEAESLKEQGSKLTVVELFRNGYARPTLLIWATFFVSLILLYFMISWLPSLLLESGLALNEANLVTSMFLFAGTLGAILMAWFADRLKSKVRLLSGVLAAAALCTILLGLNHDNPRYLVACVFAAGFCIIGGQLTLNAFASNFYPAHVRATGTGWALGVGRFGSILGPLFGSLLLAMHIPVEQIFFFCAIPAVIAALLIIQVRAPGANTLHSDVLKPSL
>NZ_CP023969.1|WP_032893436.1|501212_502016_+|tetratricopeptide-repeat-protein
MNPRTAFFACLDRSPPALFEAALWIAAEHDASVQPALILHELGALQQQVSLGMPLLPADELGQPLLRRLNDLGFAQDDHTPLRPAAALLDKVLQRKRGQPLAMGLIALEMARRLDIPMVGVNFPGHFLLRVPGADHLLDPCGGRRLYPNDCRELLARQYGEKLKLQADHLLTAEPRAILQRLSRNLRQLYLANDEPLAALVDAERVLELGNASASDYLARASLYQRLDCPSAERFDLEHALMLSDDPIQRLRLTERLGHLPPNSVMH
>NZ_CP023969.1|WP_098949494.1|500005_501025_-|Glu/Leu/Phe/Val-dehydrogenase
MFALMHSTRLESLHLSVDPVTGLKAIIAIHNSRLGPALGGCRYLAYPNDETAVADAARLAQGMSYKAALAGLPVGGGTAVIIRPVHVESRAALFEAFGRCVEKLDGRFITSIDSGTSVADMDCIAQNTRFVTSTTAAGDPAPHAAMGVFAGIRTTAMVRLGSDNLEGLRVAVQGLGNVGYALAEQLHAAGAELLVSDIDHGKVQLAMQQLGAHPIANDALLSTPCDILAPCGVGAVFNRNSVGQLRCAAVAGSASAQLTNLDIADQLEGRGILYAPDYVINSGGLIYVALKHAGTDLPGITAHLSNIGSRLTEIFAHAQAEKRSPARVADELAERLLYK
>NZ_CP023969.1|WP_003188807.1|499689_499950_+|YebG-family-protein
MAVEVVYRSSRDLERLFMDKAEADRHDKMLELAELLAEVLQKAVPSLSEQQVEEAGIYMAKNRDVFAKAFKSQPDALSELLNPAAE
>NZ_CP023969.1|WP_098949501.1|512895_513837_-|glutathione-S-transferase-family-protein
MSELILHHYPTSPFAEKARLLLGFKGLSWHSVHISPVMPKPDLTALTGGYRKTPVLQVGADIYCDTALIARRLEQEKSSPALFPLGQEMITQTFATWADSVVFAHAVSLVFQPESVAVRFGKLPPEAIKAFIADRAALFSGGTASKLPAELAKHQWPAIMARLEQQLQRESGDFLFGAPSIADFALAHSLWFLKATPVTAPLVDAYPAVLAWLGRVLGFGHGTASQMTAEQALDIARNATPAPLPDEVFEDLNGFKVGQEVTIAAIDYGVDPVAGELLFAGREELILRRTDERGGTVHVHFPRWGFRIQGIAA
>NZ_CP023969.1|WP_032897605.1|513912_514185_-|GIY-YIG-nuclease-family-protein
MSTPEPKPWYVYLVRAANGALYCGISNDPVRRFASHQSGKGARFFLSSPAVALVYTEQCASKGEALRQERLIKKLKKSAKECLAANGSSL
>NZ_CP023969.1|WP_003188784.1|514221_514692_-|nuclear-transport-factor-2-family-protein
MSDAHNALISQFYSAFQRLDAEAMVACYSDDVVFSDPAFGELRGRDAGDMWRMLTTRAKDFSLTFDQVRSDERTGSAHWVATYLFSATGNTVVNDIQARFVLRDGKICEHHDHFDLWRWSRQALGTKGLLLGWTPLVRNAVRAQANKGLKAFQASR
>NZ_CP023969.1|WP_032893444.1|514782_515418_-|response-regulator-transcription-factor
MLRVIIADDHPIVRVGQKVVIEANGKCKVVGEADGPDQLLDVLSRTPCDVLVTDFAMPGGQQADGYCLLGLLQRQYPQLPVVLVTMFANVATLRAAFAHGARAVVAKSASAKELPLAIKAVCAGQTFASECLRVQLVEAGTGDQSQEPQLSGKEREVVRMLASGMTVSQIAAQVNRSISTISKQKSTAMQRLSISTDVDLFAYARSTGIAP
>NZ_CP023969.1|WP_098949502.1|515616_516435_-|response-regulator
MGSPGGSTAGASRTVKPPFSPPPHWQDLNVLVVEDHSAYRLLLGWLLQKLGLGHALATDGFMGLDAFTNRPFDLVISDCRMPFMDGYSMARAIRQHERKHGLKRVPIIALTANLQNDSPQRCCKAGMDAWLLKPLTLEQLHAVLVRWLPDGEGRSVEPYAAAAVANWPTRATLVTTFGSDLVVDQMLETLLMEAWEDQRVLRHARVTLNAPLTAERLHRLVGSLVFLGGTGLESSAVSLIEQVQDKGVATHKAQLEVFEARLCAYLEYLSEL
>NZ_CP023969.1|WP_032893448.1|516819_517443_+|DUF1120-domain-containing-protein
MKTPVSLLSSALLLTMTSSVFAASSVDLSVKGLITPSACTPSLPGDIDFGKIAAKDLNIDTGTLLERKTVPLSVNCDAATLFAIQPIDNRAGSAVNRFYFGLGMTNENQKLGRYLLAFTNPVAETPSTLLAMYNADGFWVTLLSDEVIGPHVLVALGSRGDSGWAPHPIKDAVMDVTLEATINPAKDLTLTDEVAIDGSATFEVKYL
>NZ_CP023969.1|WP_098949503.1|517458_518088_+|DUF1120-domain-containing-protein
MKTCMPLLGGALLLALSNAVCAASSVDLTVKGLITPSACAPSLSSGGLVDHGKVAAKDLKPDHWTMLDNHTLQLAITCDAPTLLALKGIDNIGNAFDSRNSYGLELVGDKKLGEYLLTLSNAMADGAVISTIESVDNGLTWHESYPGDAWPVTSHASFGDRSSGSWAPSPVQQVTADLMVHTLIAPTAGMDLSTEVPINGSATLEVKYL
>NZ_CP023969.1|WP_098949504.1|518116_518737_+|DUF1120-domain-containing-protein
MVSPLTTLTATLLLIGAGPVWAASSQDLTVKGVITPSACAPVVSGGGTVDFGKVSVKDLNADTYTDLPRETLLLSVRCEGPTIFTLNTIDNRAGTAASHFSWHGLGMTPSDEKVGDAGLGLYSPVADGVPVRTITSRDGGVTWIPSVMLSHTLLTAVADSDGLAPIAIQELDAEIRLITHIAPASNLTLTDEVPIDGHATVQVNYL
>NZ_CP023969.1|WP_098949505.1|518748_519369_+|DUF1120-domain-containing-protein
MKTRLTTLAASALLLHSAATFAASSVDLTVKGLIVPSACTPSLSGGGVIDHGKISAKDLNPDNPTVIGNHTLVMAVNCDAAIQFAVHSIDNRASSGITSNYGLGFVNDTQKLGGYSLTLANPIAEDGVVVQPIASNDQGNTWFKETFWDPGLYMSVAAMDDDSQPLAVKDLTVDLQVQTFIMGTAGLDLSNEVTIDGSATLEVKYL
>NZ_CP023969.1|WP_098949506.1|519372_520056_+|DUF1120-domain-containing-protein
MAAPSLNSGRHGRRLALPVLMAWGRNVVMVLGLAAMTDAHAASAVDLTVTGRVTPDACHIELTHDGTVDHGKIPAHSLNADEFTVLPIQTLDLRVQCARPMLFALVGIDERADSSSAPAYFYGLGRNIHVPEERLGSVALAYRNAVGDAQAMQVMASSDNGETWSQEPNAYPRTYMAFAPVGDRQPDFIGQLTVQLQVSTAINFSQYLTLDQEVPLDGAIVLDLRYL

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Crispr_ID: NZ_CP023969_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_6

978134-978241

Orphan

Consensus_repeat	Method
AGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_6

>merge|NZ_CP023969|6|978134-978241|CRISPRCasFinder
AGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTGGATGGTGGTGTGTCAGGTACATCAGTGTCGGCTGCCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACATTTG

>NZ_CP023969|6|6|978134-978241|CRISPRCasFinder
AGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTG	GATGGTGGTGTGTCAGGTACATCAGTGTCGGCTGCC
AGGCCGTCATCGCAGGCAAGCCAGCTCCCACATTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949637.1\|974362_974683_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949642.1\|980341_980674_-\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321
NZ_CP023969.1\|WP_098949643.1\|980900_982220_+\|OprD-family-porin	unknown	unknown	gnl\|CDD\|335381
NZ_CP023969.1\|WP_019817027.1\|974669_974984_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP023969.1\|WP_098949647.1\|990386_991292_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP023969.1\|WP_098949636.1\|972338_974168_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
NZ_CP023969.1\|WP_032893684.1\|967120_969214_-\|type-III-secretion-system-export-apparatus-subunit-SctV	unknown	unknown	gnl\|CDD\|273600
NZ_CP023969.1\|WP_098949645.1\|987924_989031_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273386
NZ_CP023969.1\|WP_032893686.1\|970529_971081_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP023969.1\|WP_098949646.1\|989050_990277_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP023969.1\|WP_032893685.1\|969210_970266_-\|TyeA-family-type-III-secretion-system-gatekeeper-subunit	unknown	unknown	gnl\|CDD\|274206
NZ_CP023969.1\|WP_098949640.1\|977522_977759_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032893696.1\|983228_984626_+\|heavy-metal-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP023969.1\|WP_098949639.1\|976265_977075_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP023969.1\|WP_098949638.1\|975006_976104_-\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP023969.1\|WP_098949644.1\|984762_987906_-\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl\|CDD\|129992
NZ_CP023969.1\|WP_098949635.1\|971522_972302_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP023969.1\|WP_032893695.1\|982557_983232_+\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_CP023969.1\|WP_032893691.1\|978292_978868_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NZ_CP023969.1\|WP_098949641.1\|978928_980245_-\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949646.1\|989050_990277_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.35069e-37
NZ_CP023969.1\|WP_098949642.1\|980341_980674_-\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	6.79248e-29
NZ_CP023969.1\|WP_098949643.1\|980900_982220_+\|OprD-family-porin	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	5.43678e-180
NZ_CP023969.1\|WP_019817027.1\|974669_974984_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	3.88002e-18
NZ_CP023969.1\|WP_098949647.1\|990386_991292_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	2.77565e-109
NZ_CP023969.1\|WP_098949636.1\|972338_974168_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP023969.1\|WP_032893684.1\|967120_969214_-\|type-III-secretion-system-export-apparatus-subunit-SctV	gnl\|CDD\|273600	TIGR01399, Secretion_system_apparatus_protein_SsaV, type III secretion protein, HrcV family. Members of this family are closely homologous to the flagellar biosynthesis protein FlhA (TIGR01398) and should all participate in type III secretion systems. Examples include InvA (Salmonella enterica), LcrD (Yersinia enterocolitica), HrcV (Xanthomonas), etc. Type III secretion systems resemble flagellar biogenesis systems, and may share the property of translocating special classes of peptides through the membrane. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP023969.1\|WP_098949645.1\|987924_989031_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273386	TIGR00999, Nickel-cobalt-cadmium_resistance_protein_NccB, Membrane Fusion Protein cluster 2 (function with RND porters). [Transport and binding proteins, Other].	3.56525e-65
NZ_CP023969.1\|WP_032893686.1\|970529_971081_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	4.3436e-28
NZ_CP023969.1\|WP_032893685.1\|969210_970266_-\|TyeA-family-type-III-secretion-system-gatekeeper-subunit	gnl\|CDD\|274206	TIGR02568, type_III_secretion_system_protein, type III secretion regulator YopN/LcrE/InvE/MxiC. This protein is found in type III secretion operons and, in Yersinia is localized to the cell surface and is involved in the Low-Calicium Response (LCR), possibly by sensing the calcium concentration. In Salmonella, the gene is known as InvE and is believed to perform an essential role in the secretion process and interacts with the proteins SipBCD and SicA.//Altered name to reflect regulatory role. Added GO and role IDs . Negative regulation of type III secretion in Y pestis is mediated in part by a multiprotein complex that has been proposed to act as a physical impediment to type III secretion by blocking the entrance to the secretion apparatus prior to contact with mammalian cells. This complex is composed of YopN, its heterodimeric secretion chaperone SycN-YscB, and TyeA. 3[SS 6/3/05] [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.90769e-14
NZ_CP023969.1\|WP_032893696.1\|983228_984626_+\|heavy-metal-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	1.74064e-136
NZ_CP023969.1\|WP_032893691.1\|978292_978868_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	6.58011e-30
NZ_CP023969.1\|WP_098949638.1\|975006_976104_-\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
NZ_CP023969.1\|WP_098949644.1\|984762_987906_-\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl\|CDD\|129992	TIGR00914, Nickel-cobalt-cadmium_resistance_protein_NccA, heavy metal efflux pump, CzcA family. This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP023969.1\|WP_098949635.1\|971522_972302_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	8.81609e-82
NZ_CP023969.1\|WP_032893695.1\|982557_983232_+\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	6.37177e-133
NZ_CP023969.1\|WP_098949639.1\|976265_977075_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.05735e-22
NZ_CP023969.1\|WP_098949641.1\|978928_980245_-\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	6.11096e-43

>NZ_CP023969.1|WP_098949640.1|977522_977759_+|hypothetical-protein
MTKALPDPPMDCLVVNEELSFEDAQLYISHLINSASATVWDCCDHLQPHDRARIHAAWHLLEMAKTVINRTIECMPRT
>NZ_CP023969.1|WP_098949639.1|976265_977075_+|AraC-family-transcriptional-regulator
MGNPTHSLDWLHRAPHASGLDRIEAYFAGFAFDPHRHDTYAIGRTLFGVQSFHYRGGTTHSLPGTTMVIHPDETHDGRAGSDEGFKYRMIYVEPALIQQILGGQPLPFIPGGLSTDPRLHRASEVLLQSLDCPIDPMQEQDAMFDLAHALSAASGAIIHRKSFDYIAAERAREFIHSALGRSITLDEIADHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRHLLAQGQSLVDAAMTAGFTDQSHMTRQFRSTYGMPPSRWVKMLGR
>NZ_CP023969.1|WP_098949638.1|975006_976104_-|D-alanine--D-alanine-ligase
MSKVRVGIIFGGRSAEHEVSLQSARNVVDALDRSRFEPVLIGIDKAGHWHLNDTSNFLINQENPALIALNQSNRELAVVPGKASQQVVETSGQGLLEHIDVIFPIVHGTLGEDGCLQGLLRMADLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRGNAARTSFETAANKLGVPMFVKPANQGSSVGVSKVSDETEYRAAVELALGFDEKVLVESAVQGREIECAVLGNDQPIASGCGEIVVSSGFYSYDSKYIDGQAAQVVVPAAISHEASERIRSLAIEAFEVLGCAGLARVDVFLTQDGEVLVNEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALERHAGRKGLKISRQ
>NZ_CP023969.1|WP_019817027.1|974669_974984_+|helix-turn-helix-domain-containing-protein
MPLTDKELKERDAKRNIGEELLTAIQDVKAGRYGAVQHVEVTQAAEARSKTGLSQPKFAELLGVSVRTLQEWEQGRRAPSGAARSLLHIAAIRPDVFREVLSNA
>NZ_CP023969.1|WP_098949637.1|974362_974683_+|transcriptional-regulator
MLTLIESPLFSRQWPDYWTEDEKGIFMAFLASHPDAGNVIPRSGGCRKIRWSMEGRGKSGSVRVIYTTQLECGAVVALLIYGKSATENIPAHVLFKIAKEMNHATH
>NZ_CP023969.1|WP_098949636.1|972338_974168_+|gamma-glutamyltransferase
MNGVQRVFLISRRSLTVIAAALALAACHTPVNEQPPAPELGSGYRTDLSTRHAERHMAAAANPLAAEAGREMLRQGGSAIDAAIAMQAVLTLVEPQSSGIGGGAFIMLWDGHNVQAYDGRETAPARATERLFLKADGTPMAFTDAQIGGRSVGTPGVLRALEMAHKKSGHLPWAKLFEPAIRLSEQGFAISPRLHSLIAADRFIAQSPDMAAYFLNADGSPKATGTLLKNPALAAVFKRIAKEGPDALYQGPIAEEIARKVQGHSNAGSLSQADLKGYAAKQRAPLCTDYKQWKVCGMPPPSSGGIAVAQILGTLQALETRDPRLAIAPMTPVKSASPAGFEPTPEAVHLLAEAGRLAFADRALYVADADFTPVPVAGLVAPGYLAQRATLIGERSMGVAKPGQPAGIQVAYAPDRSPLRISTSQVVAVDDQGGAVSMTTTVEAAFGSHVMVQGFLLNNQMTDFSFIPEENGQPVANRVQPGKRPRSAMAPTLVFDRNTGELLATVGSPGGSQIIEYVSKSLVAMLDWKLDPQAAISLPNFGSRNGATELEVGLFSPALKQALKDKGHALSEIEMTSGVQAIVRTRDAQGKVSLSGGADPRREGEALGD
>NZ_CP023969.1|WP_098949635.1|971522_972302_+|PhzF-family-phenazine-biosynthesis-protein
MQLDIYQVDAFSHHPFGGNPAAVCPLTEWLPDEQLQQIAAENNLSETAFFVPRGDVYELRWLTPQVEVDLCGHATLAAAWVLIHKLADAPQVLRFATRSGELRVTRNGDELAMDFPAKKPERCEPPHGMLSALGLETAEVFGTDDYIVLVEDEAQVAALTPDFARLKGLPKRGIAVTAKSTRFDFVSRWFGPNVGVNEDPVTGSAHTSLAPFWAERLGKSQLNAEQGGQRKGQLRCELQGDRVIISGKAVLYMQGTIYL
>NZ_CP023969.1|WP_032893686.1|970529_971081_+|RNA-polymerase-sigma-factor
MNIPIEALVHLGGSSPQFMLHLTDDQQKKLRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGTATLSTWMCGIAQNLIRNHFRRLYAKPAHCEFDESLWHGQEESHSLDWEFEVNRRLENTLSAIDHLPTEMRRTLYASLETDGSYQDTADVLDIPIGTVRSRLSRAREQLKRVTHTPLHP
>NZ_CP023969.1|WP_032893685.1|969210_970266_-|TyeA-family-type-III-secretion-system-gatekeeper-subunit
MKVESTSEVPITPRVELPTVSPAAKPEPGQGIDDLFLHFSQEVESSSRTLDKRKIGVRVPPVQALAQLYEQLGHPAQESFAAVARRIRLQLLMQPSIDKLLEATGGDPARTFVVLKAVCEQAEADVRSSEADLARDAIAKLEVRFKGQIQAGLNIAMALQTAGGDPQERQALRALYYASVVTRQSLATMMQALLGVYGDDRFAHGLNVMSSALTADIAAHVSSVPTAMLRTLLVGLRSCGALSGVLCSCRELVQNLATELHAVSLLQRLLGYTSTGIVTNEVMRLAEDMGAGTSTLVALNALYPLFLKLPLALWPDSQSRQEALHNFLLVMDQLARLEGISPGFPNSSVLA
>NZ_CP023969.1|WP_032893684.1|967120_969214_-|type-III-secretion-system-export-apparatus-subunit-SctV
MSVLSTVNGVLLKVAQRAEVLGAVVIMAIVFIFIVPLPTWLVDILIALNICISCLLIMLALYLPGPLAFSSFPSILLLTTMFRLALSIATTRLILLEQDAGDIVEAFGNFVVGGNLAVGMVIFLILTLVNFLVITKGSERVAEVAARFSLDAMPGKQMSIDSDLRAGLIDGVQARDKREQLSRESQLFGAMDGAMKFVKGDAIAGLIIVVVNLLGGFSTGMFQHGLSAADSMALYSVLTIGDGLIAQIPALLISLTAGMIITRVAPEGRKGITNMGAEIARQMTSEPKSWMIASVAMLVFAIVPGMPTLVFILLAMMTGALGYYLDRRRRREAQPEAEAVEAMRPEENGKEDLRGFDPSRPYLLQFPSALRGTPEVTDLIHGIRQVRNSLVANIGLTLPPFEVEIDDSLADDEMRFCVHEVPMVKASVVQRVAVERSALTVEPEHGIPGLAERNEQDWLWLPPDDPLLNDAQLERFNATSLIVERMKKAMMLSGPQFLGIQESKAILSWLENNQPELVQELQRIMPISRFSAVLQRLASEGVPLRAVRLIVESLIEYGQHEREPEALADYARIALKSQIYHQYSEADGLHAWLLSPQTENVLREALRQTQTGVFFALDGDNSAALINLLNQAFSARAKIKSVLLVAQDLRSPLRTLLLEEFNHVPVLSFAELGSNSKVKVLGRFDLGQDELMHGTLA
>NZ_CP023969.1|WP_032893691.1|978292_978868_-|flavin-reductase-family-protein
MSPTFRRPVPLSKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFEPPKVAVVLDKATWTRQLLEGAGTFVLQVPCVAQADLVQTVGNTRGVEADKFAAYGLHSFSGEHTEAPMLEGCVAWLECRLLPEPHNQQAYDLFLGEVVAAYADERVFSEGHWHFEGHDELRTLHHVAGGNFLAIGQPVVGRQL
>NZ_CP023969.1|WP_098949641.1|978928_980245_-|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MFNTRLKQELTALREELSSLLQVKESLESEMLCLTLDPEGRVEWANANFLQELAYSLGEIVGRAIEDLVPAHVRQDEFQLRFKQALARGEHFAGAVRLMRGNGKEAWLRSIVQPVRSSEGRIKQFSMFSSDLTRTIESSREHENLITALMRSTALIEFDLEGHVLTANDRFLGAMGYSLAQIEGKHHRMFCEPQEYNSAEYQQFWKRLNAGEFVAARFKRVDSHGRLVWLEATYNPVVDANERLYKVVKFATVITEQVNREQAVAEAANIAYSTSLQTDDSAQRGTTVVTQAVDVMRDLAQHMQQAGEGIEALNAQSQVIGSIVKTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEIVGVVRQNQDMARDAVALMADGRAQAEQGLALAAEAGTVIVEIQDGAQKVVSAVGQFANQLSS
>NZ_CP023969.1|WP_098949642.1|980341_980674_-|DUF2790-domain-containing-protein
MNFYKLGLGVLTAVLSFGALAEGGGDRTFALMMERNEKAMAAYAIQKGKPVPEVQAYRYGMDLDIAKVVNVTPPIRSCNAVPSRMTYEDSSGKLNTLEYQVMGVCRNNGG
>NZ_CP023969.1|WP_098949643.1|980900_982220_+|OprD-family-porin
MSIRHYTLPFSLMAALPMAAMAVEGKPEGFIEGSRINVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGFIGKFESGFTQGTVGFGLDAFAMYGLTLDSGSGRSGGKGSFGVLPVNSDNQPENSYSKVGGAAKVRVLDTVIKAGDVFPLTPVVAYGDSRLLPESFRGVTLQNTSVEGLSLQGGRLSGMSQPSESGMNKGFATFYAGKVDSPWIAYFGGDYQLNSHLGFSLYSSRLKDAWDQYYLGSNANYALTDDVSLFGDFNYYKAVDEGQKRLGEFDNNIWSARLGVKVGAHSVAVSHQRNNGDDDFDYLRQSDSIFLNNSIQYSDFNAPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGTGADYSNANAVYMRRDAAGNPLTDQRRWERDIEAKYVVQSGRLKDLSLRLRQATVRSSAFESDLEEVRFIAEYPLAVL
>NZ_CP023969.1|WP_032893695.1|982557_983232_+|heavy-metal-response-regulator-transcription-factor
MRILVVEDEQKTADYLQQGLNESGYVVDCAANGIDGLHLAGQHAYELVILDVNLPGKDGWQVLEELRRNGTQRVMMLTARGRLADKIKGLDMGADDYLVKPFEFPELLARVRTLMRRSEHIPQPEVFRVSDLELDPRRHRAYRGTRRIDLTTKEFALLQVLMRQAGEVLTRTQIISLVWDMNFDCDTNVVEVSISRLRAKVDDQSEVKLIHTIRGVGYVLEARP
>NZ_CP023969.1|WP_032893696.1|983228_984626_+|heavy-metal-sensor-histidine-kinase
MKTGSLSMRLGLTVSLMGAGLVLLLATLAYLALTHELEKLARKNLESKMEQIQHSLALGLDAHGIRARPHSLMDLVMGHDNFHLTIVGTAPDNSVLLNVGSKPQEPLLTDFKPRETLGYLNWVDSYGNQILSASSLMRLANGERVRVLLSLDRMDDQALLSAYLRATLIALPLLLILIGMGAWWLVQRGLAPLKQFSQVAAKVTTQDLTHRLSVDNLPHELGELAHGINVMLDRLDAGVQQLSQFSDDLAHELRAPLTNLMGKAQLTLSRQRPPQEYKAVLESNTEELERLARIVSDMLFLAQVSHPAARASFTEVSLAQEAQRVMELFALSAEDKHVTLSLRGDAWVTGDRLMIQRAISNLLSNAIRHTPEASTVLLLVETYEQSVSLSVGNPGRGIEAHHLPHLFERFYRADSSRTRAEGGTGLGLAIVKSIMHLHQGHAHVTSQPGRFTRFSLVFPQGACAL
>NZ_CP023969.1|WP_098949644.1|984762_987906_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MFERLIQFAIEQRIVVLLAVLLMAGVGIASYQKLPIDAVPDITNVQVQINSAAAGFSPLETEQRITFPIETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDLFFARQLVNERLQVAREQLPDGIETAMGPISTGLGEIFLWTVEAEDGVLKEDGTPYTPTDLRVIQDWIIKPQLRNVPGVAEINTIGGFAKEYQIAPDPKRLAAYNLTLNDLVTALERNNANVGAGYIERSGEQLLIRAPGQVASIDDIANIVITTSDGTPIRVRNVAQVDIGRELRTGAATENGREVVLGTVFMLIGENSRSVSQAVAKKLEEINRSLPDGVVAVTVYDRTNLVEKAIATVKKNLFEGALLVVAVLFLFLGNIRAALITAMVIPLAMLFTFTGMFTNKVSANLMSLGALDFGIIVDGAVVIVENAIRRLAHAQHRHGRLLTRSERLHEVFAAAKEARRALIFGQLIIMVVYLPIFALTGVAGKMFHPMAFTVVIALLGAMILSVTFVPAAIALFVTGKVKEEENFVMRSARRVYDPVLNWVMVRRPLVFGLAALTIVVSGLVASRMGSEFIPSLSEGDFAQQALRVPGTSLTQSVQMQQQLEKTLLAQVPEIERVFARTGTAEIASDPMPPNISDSYVMLKPKDQWPDPKKSREAIIADIQRASAIVPGSVYELSQPIQLRFNELISGVRSDVAVKVFGDDMAVLNQTAGEIAETLQKLNGASEVKVEQTSGLPVLTINIDRDKAARFGLNVGDVQDTIAVAVGGRQAGTLYEGDRRFDMVVRLSDTLRTDIDGLSRLLIPVPALASSTSGQLGFIALSQVASLDLVLGPNQISRENGKRLVIVSANVRGRDIGSFVEEAEAAIATQVKVPAGYWTTWGGQFEQLKEASDRLRIVVPVALLLVFGLLFMMFNNLKDGLLVFTGIPFALTGGIMALWLRDIPLSISAGVGFIALSGVAVLNGLVMIAFIRNLREEGRSLSVAIHEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQRPLATVVIGGIISSTLLTLLVLPALYQWAHRRDEEAA
>NZ_CP023969.1|WP_098949645.1|987924_989031_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNKKHGMALAVALGLMLSGFAHAEEEEGKLELTEQQIQAAGIQLAQAQPRAISTVLTLPGEVRFDEDRTSHIVPRAAGVVEAVKVNLGQSVKKGELLAVIASQQISDQRSELAASERRVELARTTFQRERQLWQDKISAEQDYLLARQTLQEAEIALNNARQKMTALSGSAVLAGGNRYELRAPFAGVVVEKHLGVGEVVSETSNAFTLSDLSQVWVTFGVFPKDLNKVRVGKPVKVSSTEMGTEVLGTVAYVGNLLGEQTRTATVRVTVPNPDDAWRPGLFVAVQVATDTYQAKVTVPQTAIQTVEDKPSVFVRTADGFITRHLELGVSENGYVEVRKGLEAGAQVATAGSFILKSELGKGSAEHAH
>NZ_CP023969.1|WP_098949646.1|989050_990277_-|TolC-family-protein
MAIFVRTLLGAAALALWISANAAQAQPLTLDAALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDAEDTRRNSRTTSIKLSQTLELGGKRGARIEVASRAQDAAALTLEQRRNQLRAEVIDSYYGALRAQERLDLAQRSMTLAERGLVVANGRVTAGKSSPVEATRAQLQVSEIRLELNRAQIGLTDAYRRLATSTGSAATDFQAVAAPSTLVPALPAAAPLLARLEQTAELRLAELNIVQNEASVGLEKAQRIPDLDVSIGSQYDASVRERVNLVGVSMPIPLFNRNQGNILAATRRADQARDLRNAAELRLRTETRQALDLWQTANTEVRAFNQQILPAAQSAVDSATRGFEMGKFNFLDVLDAQRTLIAARTQYLAATAQATEAWVRIERIYGDLARF
>NZ_CP023969.1|WP_098949647.1|990386_991292_-|cation-transporter
MSAGHSHAQVRAGHERKLWIALGLTGSFMLAEVIGAFVTGSLALLSDAAHMMTDALALAISLVAIQVAKRPADRKRTFGYARFEILAAAFNALLLFAVAFYILYEAYQRLQAPAEIQSTGMLVIALLGLVVNLISMRLLSAASGESLNVKGAYLEVWSDMLGSVGVIIAALVIMFTGWGWVDSVVAAAIGFWVLPRTWTLLKASMNILLQGVPEGVNIEQVEQGIRSVPGVKDVHDLHIWALTSGKNVLSTHLVADASQGSEQQILSRVTELLHEQFDIFHATIQVEGEGFTHDEHDEVHA

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Crispr_ID: NZ_CP023969_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_7

1044891-1045283

Orphan

Consensus_repeat	Method
GGCACNGGCGGCGGNNNCGGCGGC	CRT

7 spacers

The CRISPR arrays of NZ_CP023969_7

>merge|NZ_CP023969|7|1044891-1045283|CRT
GGTACTGGTGGCGGTGACGGCGGCACTGGCGGTGGTACCGGTGGTGGCACGGGCGGTGGTGACGGTGGCACGGGCGGTGGTACCGGTGGTGGCACGGGCGGCGGTGACGGCGGCACTGGTGGCGGCACTGGTGGCGGTACCGGCGGCGGCACGGGCGGCGGTGACGGCGGCACCGGTGGCGGTACCGGTGGCGGCACGGGCGGCGGTGACGGCGGCACTGGCGGTGGCACTGGCGGTGGCACTGGCGGTGGCACTGGCGGCGGCACTGGCGGCGGCACTGGTGGCGGCACTGGCGGCGGCACCGGTGGTGGCACTGGTGGCGGCACTGGCGGTGGCACTGGCGGCGGCACTGGCGGTGGCACTGGCGGCGGCACTGGTGGCGGCACCGGCGGC

>NZ_CP023969|7|1|1044891-1045283|CRT
GGTACTGGTGGCGGTGACGGCGGC	ACTGGCGGTGGTACCGGTGGT
GGCACGGGCGGTGGTGACGGTGGC	ACGGGCGGTGGTACCGGTGGT
GGCACGGGCGGCGGTGACGGCGGC	ACTGGTGGCGGCACTGGTGGCGGTACCGGCGGC
GGCACGGGCGGCGGTGACGGCGGC	ACCGGTGGCGGTACCGGTGGC
GGCACGGGCGGCGGTGACGGCGGC	ACTGGCGGTGGCACTGGCGGTGGCACTGGCGGT
GGCACTGGCGGCGGCACTGGCGGC	GGCACTGGTGGCGGCACTGGCGGCGGCACCGGTGGTGGCACTGGTGGC
GGCACTGGCGGTGGCACTGGCGGC	GGCACTGGCGGTGGCACTGGCGGC
GGCACTGGTGGCGGCACCGGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949670.1\|1046816_1048499_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP023969.1\|WP_098949674.1\|1053165_1054437_+\|CpaF-family-protein	unknown	unknown	gnl\|CDD\|227297
NZ_CP023969.1\|WP_098949671.1\|1048821_1049226_-\|response-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP023969.1\|WP_098949664.1\|1036641_1037022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003188242.1\|1039287_1039689_+\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133383
NZ_CP023969.1\|WP_098949673.1\|1050773_1051979_+\|type-II-and-III-secretion-system-protein-family-protein	unknown	unknown	gnl\|CDD\|227299
NZ_CP023969.1\|WP_032893740.1\|1051975_1053169_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227298
NZ_CP023969.1\|WP_020302460.1\|1049278_1049473_-\|Flp-family-type-IVb-pilin	unknown	unknown	gnl\|CDD\|226366
NZ_CP023969.1\|WP_098949675.1\|1054446_1055328_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP023969.1\|WP_003188250.1\|1034827_1035007_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098949668.1\|1043593_1044442_+\|acyl-dehydratase	unknown	unknown	gnl\|CDD\|366711
NZ_CP023969.1\|WP_032893730.1\|1036296_1036494_-\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NZ_CP023969.1\|WP_098949665.1\|1037089_1039291_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP023969.1\|WP_098949663.1\|1035015_1036209_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP023969.1\|WP_003188224.1\|1055329_1056217_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NZ_CP023969.1\|WP_098949676.1\|1056227_1056953_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227343
NZ_CP023969.1\|WP_098949672.1\|1049809_1050754_+\|Flp-pilus-assembly-protein-CpaB	unknown	unknown	gnl\|CDD\|274472
NZ_CP023969.1\|WP_098949666.1\|1040847_1042125_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|236440
NZ_CP023969.1\|WP_003188241.1\|1039813_1040713_-\|serine-protein-kinase-RIO	unknown	unknown	gnl\|CDD\|224632
NZ_CP023969.1\|WP_098949667.1\|1042238_1043591_+\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|236207

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949670.1\|1046816_1048499_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	2.32229e-69
NZ_CP023969.1\|WP_098949671.1\|1048821_1049226_-\|response-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	2.61857e-22
NZ_CP023969.1\|WP_003188242.1\|1039287_1039689_+\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|133383	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators. Helix-turn-helix (HTH) transcription regulators CueR and ActP, copper efflux regulators. In Bacillus subtilis, copper induced CueR regulates the copZA operon, preventing copper toxicity. In Rhizobium leguminosarum, ActP controls copper homeostasis; it detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. These proteins are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain winged HTH motifs that mediate DNA binding, while the C-terminal domains have two conserved cysteines that define a monovalent copper ion binding site. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	3.97383e-76
NZ_CP023969.1\|WP_098949673.1\|1050773_1051979_+\|type-II-and-III-secretion-system-protein-family-protein	gnl\|CDD\|227299	COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion].	1.01463e-95
NZ_CP023969.1\|WP_032893740.1\|1051975_1053169_+\|pilus-assembly-protein	gnl\|CDD\|227298	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion].	1.94695e-42
NZ_CP023969.1\|WP_020302460.1\|1049278_1049473_-\|Flp-family-type-IVb-pilin	gnl\|CDD\|226366	COG3847, Flp, Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion].	4.75165e-09
NZ_CP023969.1\|WP_098949675.1\|1054446_1055328_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	1.99055e-55
NZ_CP023969.1\|WP_098949674.1\|1053165_1054437_+\|CpaF-family-protein	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	2.14744e-154
NZ_CP023969.1\|WP_098949668.1\|1043593_1044442_+\|acyl-dehydratase	gnl\|CDD\|366711	pfam01575, MaoC_dehydratas, MaoC like domain. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase. The MaoC protein is found to share similarity with a wide variety of enzymes; estradiol 17 beta-dehydrogenase 4, peroxisomal hydratase-dehydrogenase-epimerase, fatty acid synthase beta subunit. Several bacterial proteins that are composed solely of this domain have (R)-specific enoyl-CoA hydratase activity. This domain is also present in the NodN nodulation protein N.	2.23712e-14
NZ_CP023969.1\|WP_032893730.1\|1036296_1036494_-\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	5.21678e-11
NZ_CP023969.1\|WP_098949665.1\|1037089_1039291_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP023969.1\|WP_098949663.1\|1035015_1036209_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.16971e-107
NZ_CP023969.1\|WP_003188224.1\|1055329_1056217_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	5.14306e-13
NZ_CP023969.1\|WP_098949676.1\|1056227_1056953_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	6.84403e-17
NZ_CP023969.1\|WP_098949672.1\|1049809_1050754_+\|Flp-pilus-assembly-protein-CpaB	gnl\|CDD\|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	5.67973e-45
NZ_CP023969.1\|WP_098949666.1\|1040847_1042125_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|236440	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase.	0
NZ_CP023969.1\|WP_003188241.1\|1039813_1040713_-\|serine-protein-kinase-RIO	gnl\|CDD\|224632	COG1718, RIO1, Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning].	1.80575e-76
NZ_CP023969.1\|WP_098949667.1\|1042238_1043591_+\|3-oxoacyl-ACP-reductase	gnl\|CDD\|236207	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	0

>NZ_CP023969.1|WP_098949668.1|1043593_1044442_+|acyl-dehydratase
MQWQTLDSTPSLLPLYWRAALKRKITGSTLPERGLRCRMSINPSAVAAYRKVCGFADSPMLPATYPHILAFGLQLQLLTDKTFPFPLLGLIHLRNRIRIHRPLGAVGDVSVGVYARNLSPHPKGATFDIVTVVEDALGLLWEAESQMLCRGVKLEGEAADSGLQSPETLTELTHWKAPTDIGRRYARVSGDYNPIHLSAPTAKLFGFPQAIAHGLWNKARTLAALAEHLPAANIEIDVEFMKPVRLPSEVILMSSAAGSSGALQLKGAGDIQHMRGKWQPIA
>NZ_CP023969.1|WP_098949667.1|1042238_1043591_+|3-oxoacyl-ACP-reductase
MSDRYIDFANSSLGHRLVAAIGLPSPVRLERWQAGRLRPVEGALLLGGGALATQVLAFANRLTDAVYSYGAEASTAPAWIPGHGPKLKAVVFDASGLQHTDQLKQLREFFQPLLKNLDHSAHLVILGRAPESLSDPFAASAQRALEGFSRSLAKELRSGGVLQLLYVGDGAEDQLEGALRFFLSPKSAYISGQVIRLTACDTPVQDWTRPLAGRKALVTGAARGIGASIAETLARDGADVILLDVPQAKADLEALAARLNARTVVLDICAEDVARQLVEHLPDGLDILVHNAGITRDKTLANMTPEYWDAVLAVNLRAPQVLTKALLDSGTLQDNARVVLLASISGIAGNRGQTNYAASKAGLIGLAQAWAPLLKERGISINAVAPGFIETQMTAHIPFALREAGRRMSSLGQGGLPQDVAEAVAWLSQPGSGAVSGQALRVCGQSLLGA
>NZ_CP023969.1|WP_098949666.1|1040847_1042125_-|acetyl-CoA-C-acetyltransferase
MTQLRRVAIIGGNRIPFARSNGPYATASNQAMLTAALEGLIERYNLHGLRMGEVAAGAVLKHSRDFNLTRECVLGSRLSPQTPAYDIQQACGTGLEAALLVANKIALGQIECGIAGGVDTTSDAPIGVNEGLRKLLLKANRSKSMADKLKVLLQLRPQHLKPELPRNGEPRTGLSMGQHCELMAQTWQIPRAEQDQLALESHQKIAAAYAEGWHNDLLTPFLGLTRDNNLRPDLTLEKLASLKPAFERSEKGTLTAGNSTPLTDGASLVLLGSEAWAKERGLPILAYLRDGEAAAVDFVHGAEGLLMAPVYAVPRLLARNGLTLQDFDYYEIHEAFAAQVLCTLKAWEDADYCKTRLGLDAPLGSIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLDAAGKGRGLISICAAGGQGVTAIIER
>NZ_CP023969.1|WP_003188241.1|1039813_1040713_-|serine-protein-kinase-RIO
MKTPKRIEPLIEDGLVDEVLRPLMSGKEAAVYVVRCGNELRCAKVYKEANKRSFRQASEYQEGRKVRNSRQARAMAKGSKFGKKETEDAWQNAEVAALFRLAGAGVRVPKPYDFLEGVLLMELVADEYGDAAPRLNDVVLDPDQAREYHAFLISQIVLMLCTGLVHGDLSEFNVLLTPTGPVIIDLPQAVDAAGNNHAFNMLERDVGNMASYFGRFAPELKKTKYAKEMWALYEAGTLHPASVLTGEFDEPEELADVGGVIREIEAARLDEERRQAIRAADDAPPSKVPDEPPPPPWMQ
>NZ_CP023969.1|WP_003188242.1|1039287_1039689_+|Cu(I)-responsive-transcriptional-regulator
MNIGQAARTSGLSAKMIRYYESIGLLKTAHRTDSGYRVYGHDDLHTLTFIKRSRDLGFSLEEVGKLLTLWEDRQRASADVKALARQHIDELNHKIRELGQLRDTLQDLMEHCQGDHRPDCPILKELAAGNCCA
>NZ_CP023969.1|WP_098949665.1|1037089_1039291_+|copper-translocating-P-type-ATPase
MNGSTTFDLPIGGMTCASCAGRVERALGKVPGVQRVSVNLANERAHIEVQGQMDPSVLIAAVDKAGYTATLPQSETATDADQARRLRRERWSLMAGILLALPLVLPMLVEPFGLHWMLPAWIQFALATPVQFILGARFYVAAWKAVRAGAGNMDLLVAIGTSAGYGLSIYEWLTAAPGVTPHLYFEASAVVIALVLLGKYLESRAKRQTASAIRALEALRPERAIRVQDGREEDVAISALKHGDLVLVKPGERFPVDGEVVEGQSHADEALISGESLPVPKQPGDAVTGGAINGEGRLLVRTLALGAESVLARIIRLVEDAQAAKAPIQKLVDKVSQVFVPAVLVLALITVVGWWLYGASLETAIINAVAVLVIACPCALGLATPTAIMAGTGVAARHGILIKDAEALERANAVSAVVFDKTGTLTSGAPNIAHLAAVDGDEALLLQQAGALQRGSEHPLAKAVLDACRERGLDVADVSASQSLTGRGIAGTLDGRPLALGNRRLLEETGLDAGDLGPRAKEWEAEGRTLSWLIEQGAQPRVLGLFAFGDTLKPGALQAVQQLKAQHISSHLITGDNHGSARVVAEALGIDDVHAEVLPAYKAAAVAELKKTGVVAMVGDGINDAPALAAADIGIAMGGGTDVAMHAAGITLMRGDPRLVPAALEISRKTYAKIRQNLFWAFVYNLIGIPLAAFGLLNPVLAGAAMALSSVSVVSNALLLKTWKPKDLEDQRP
>NZ_CP023969.1|WP_098949664.1|1036641_1037022_+|hypothetical-protein
MRWLFFALAGLMSLPAAAPQALAAEDYAVLIISRERLEVPTYCEIGLYIQDQLAGRLFQEQATSFNLPAGDTSLRLKLLPGQAAGCLPGLLAPRAQNISLKAGDVRKLRIALGPDGMYLKAAALEY
>NZ_CP023969.1|WP_032893730.1|1036296_1036494_-|heavy-metal-associated-domain-containing-protein
MQIFSVEGMTCGHCVKAVTQAVQSQDPAASVEVDLKAKEVRVASGLSSDQVIGLITEEGYSAKLA
>NZ_CP023969.1|WP_098949663.1|1035015_1036209_-|multidrug-effflux-MFS-transporter
MNLRIILILGALSAFAPLAIDFYLPGFPAMATAFATDEKHIQLTLAVYFAGLAIGQLIYGPLADRFGRRVPLLSGVTLFTLASFACAYAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVGSAKVYSQLMLVTGLAPILAPLAGGLMVGVWGWQSIFLALSLFSVMAAIAVAVGLPETFPADQPRQLLSGSLRRYGSLLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIKLYGVPAEHYGWLFGSNAAGFILVAQLNARLLAKRGPAFLLSRTVWVYVAAALTLLAIAALRTEALWPLLVPLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVLHDGTAMPMAMVISLCGVLAVTIAMATQRLQRARAVQAQV
>NZ_CP023969.1|WP_003188250.1|1034827_1035007_+|hypothetical-protein
MKILIKALAKSPGSQWQVRLDGEAINFRSEAEARAFADTLQARIQAPHRFPLNQQRSAG
>NZ_CP023969.1|WP_098949670.1|1046816_1048499_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRVLTPLLLLTLSAYAQAETLPSFLNSNDTVRTLPVPNLPADAYRPPTSKTQVPEAPPTAGQPLLMDTKVTIRKLQIEGGTVYPLAETAQVYAPLIGRETNLAQLIEATRGITRRYQEDGYLLSYAFLPQQNFENGLVRVVLVEGYIKDYQQTGDIGSVSAYVDKLAQKLLAERPLTRKTFERYTTLMSRIPGLSVQAQVPPPGTTDGATHMQIQASRKPFTTSMSLVQKSRGGTQALLSATSNSQTSMGEQLSVSGLFPPGEDKEHYYRVDYNQFINAEGTQLALAAERYRADPNSSVQLDGGFELKPHQSIDRYSIGLSHPFIASPTESLTLGTRLYAVDQTTRYKLVGFPLSFDIESNLRALAFEGDWRKADAQRLRIISGGLYQGIDGLGAKARSDLGVAKPDLDFFRLRLSGVQSDKFFDNWQGVLSGALYWSDNTLPDSERVTFGGQNFGRGYPDDQGSGDKGWGVAYEVNYSFNRTGNWVKILQPYVVVDRAKSWFNDLPVKANDMSSAAVGLRFGDKKYYNIALEAAKPMSDIALDSFNRRPRYTLSFSYQL
>NZ_CP023969.1|WP_098949671.1|1048821_1049226_-|response-regulator
MTHPSSSRQKILLVDDEEDALVELAESLENEGFVCFTANSVTFALQELTLHPDIALVITDLRMPEESGISLIKRLREHTSRSQLPVIVMSGHAEMDDVSDMLRLQVLDLFRKPIYLVRLLDTLNNLFPLSTLGR
>NZ_CP023969.1|WP_020302460.1|1049278_1049473_-|Flp-family-type-IVb-pilin
MILDLFLKFYIHAQLFLRRRDGASAIEYVIIVAIVALGIISFGGGLGDKIKAIFQQVSDALPAA
>NZ_CP023969.1|WP_098949672.1|1049809_1050754_+|Flp-pilus-assembly-protein-CpaB
MNSRISMVLAGLLLIGALVAGYWGLVLSRPPAPAVAPSPAPVISVEKTVAVVEDQTRQPVVVLVHAVAPFVPLTAADVAVETLRTVPAGSLTSIDQAIGRTPLRALGAGTWLNDESFTAGGPLARMIRTNERALAVAVDEVIGAGGQLSPGDYVDVLLFLRQDNANAEQSAQVVIPAIRLLSVGDQLGLANDGTPAVPPPATAEERAQAAQRRTAARSVVLAVPEPLLSRLMLASQAGTLRLAVRSADEQLLSRYWAGESDTPDKVQSANRDLYQFTQLALSGPPKKITPAVADTGQRRGVEVIRGAAAAQPTP
>NZ_CP023969.1|WP_098949673.1|1050773_1051979_+|type-II-and-III-secretion-system-protein-family-protein
MSQRYAQLALALMLPCLPLGMAMGASGNCNALGQLPAVIEVGEGLQTELQSPVAITRLAIGDPKIADVRVNGDRHFLLTGVGSGATSLMVWTGCSTTPRQSMVFVKGKATSALTSQSLSPSEDPTLPSQVQTDIRFVEVSRTKLKEASTKILGMGNNFFLGSPSLLSPSEGIFKLPVSADNFNIGFGGGRVKALINALESSGFAYTLARPSLVAMSGQSATFLAGGEVPIPVPSAGSDTITIEYKEFGIRLTLTPTVIDHNRIALKVAPEVSELDYNNAIRIQGIQVPALTVRRTDTSVSLADGESFVISGLISSTNRSTIAKLPGLGDIPIIGAFFRDSNINSEEKELLMIVTPHLVQPLAANAQLPSLPGEKLRTYDPNWFRLFFLENGNFDRRSGLSQ
>NZ_CP023969.1|WP_032893740.1|1051975_1053169_+|pilus-assembly-protein
MSDSLSQTFLAITRNSTDLEWLQGALAPLGQVISVGGGSLDELLALVDVTFANLVFVGLDREHLVAQSALIEGALEAKPMLAVVALGDGMDNQLVLNAMRAGARDFVAYGSRSSEVAGLVRRLSKRLPPTAPNAHLGGLTVLYGAQGNTDGALLASHLAMVVQKSGQQTLMLDLGLPRGDSLALLGLDSTFNFGDALRHLRRLDATLINSAFTSTDDGLRILAYAASDEPLEMTSAAELYMLLSALRQHFQHIVVNLTGQADSEALRTFVSHCDKLLWCTDQGVLDCRRNLAVLNLWREKGMKLDHAKLLVDRYIKGCAPDTEALEKSFGLECIAVLPLSPEVRLNAKNQGQSLFTLAPREALTQALRHLGERLAKRTEGLDKPSTRWFERLLGTSR
>NZ_CP023969.1|WP_098949674.1|1053165_1054437_+|CpaF-family-protein
MNSEKLFGAPARGAAAHNDHDGLKLVLHRYIIDAIEESGQNLLEGSRQSLAQFVIDKVAEYITRMHLAISRYEMERLAEEIVDELTGFGPLEVLLRDVSVTEILVNGPHRVFIERDGVLHQSDLRFIDAHHVERVMQRILAPLGRRLDESSPMVDARLPDGSRVNAIIPPIALDGPCLSIRKFRKDMLKSSDLVAMQTIDHNIFEFFQEAVGKRCNILISGGTGTGKTTLLNILSQLINPHERLVTIEDVAELQLGHPHVVRLETRPPNAEGHGEVKASDLIRNALRMRPDRIILGEIRGVEVLDVMTAMNTGHDGSMSTVHANNAQDALLRLETLVGLTGRVVAEKTLRQMICAALDVVIQLTRLPDGRRCVSEVVEVVGVRDDVYVTNTLFRLDRRTGFGFLREALNPAGDKLRRESALPL
>NZ_CP023969.1|WP_098949675.1|1054446_1055328_+|type-II-secretion-system-F-family-protein
MTGLVLLLICVLLISLSVWLFQRGLRQAGTDRVLERLSDGQPVPQEPNGSWVALERMFQRAGLGKPTDRLGLWLSGWTAGMLLGYLLAGGLGLLTMLILPPLLLRVYIAWRYQRRVQRMVEQLPQLLDHSVRSLKSGRTLADAVLGAIDSTEAPLKQAMSRIQRNVQMGVSLPESVSDFAEFYERDEFRLFALGLKVNHRYGGNASELLENLIKMIREREQGARQLKAMTGETRMTAYVLAGLPIAMVGYFLMVNPGYLMSMWNDGTGRYLLLAAAALDITGTFVMWRMLRSI
>NZ_CP023969.1|WP_003188224.1|1055329_1056217_+|type-II-secretion-system-F-family-protein
MAILICILLSLAAVALIVGNLLEQRRRQRLVSQRLQGQLTREDKLGSLMRQLGASAVAQRSVSLDNETQTLLNRVGWRKANQRSMFAAFQIGVPIVLLGLTLLGQQLLFPHAGSPWIAPAIALGIGYLLPKRILALSAKYRQERIAREISTFIPLLRILFESGMAVEQSLRVLSTEAQRLLPDLTHELRLILVRVDSGLELSEELGKTARLLAVDEFTDTCIILQQLIHQGGGAMKSLLALKQLLDDRRLTRLQEYISKMSAKMSVVMMVFLFPALLIVLGGPAMIAISRALNNF
>NZ_CP023969.1|WP_098949676.1|1056227_1056953_+|tetratricopeptide-repeat-protein
MKPLIVALSLLMLGGCASNGQVPWAGLLAPGSCPKPSADQELSLNLADDMANEGKLHASLANLQNLPSTLPQVRQRQARAYRLLGRPDAEPLYHSLLGTCLAADGEHGLGQLASAKGDNGQAMAHLQRAARLAPTDEKIRNDLGVVYLDQRRLEDARFEFMTAIELKQSDQLAAVNLVTLLIYQDNWEQAAKVVGQLGLSPEQVTRAQARAQHLKEAGTAPQRPVKDQVAAVSEPLPASVK

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Crispr_ID: NZ_CP023969_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_8

1542216-1542310

Orphan

Consensus_repeat	Method
GATCGTGGGGCGTCAGGTAGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_8

>merge|NZ_CP023969|8|1542216-1542310|CRISPRCasFinder
GATCGTGGGGCGTCAGGTAGATGAGTGTCGGCTGGCTGGTCGTCATCGCAGGCAAGCCAGCTCCCACAATTTGATCGTGGGGCTTCAGGTAGATG

>NZ_CP023969|8|7|1542216-1542310|CRISPRCasFinder
GATCGTGGGGCGTCAGGTAGATG	AGTGTCGGCTGGCTGGTCGTCATCGCAGGCAAGCCAGCTCCCACAATTT
GATCGTGGGGCTTCAGGTAGATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098949864.1\|1549212_1550028_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP023969.1\|WP_098949855.1\|1537843_1540159_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|224544
NZ_CP023969.1\|WP_098949862.1\|1546336_1547338_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270273
NZ_CP023969.1\|WP_098949860.1\|1544227_1545133_-\|TauD/TfdA-family-dioxygenase	unknown	unknown	gnl\|CDD\|225086
NZ_CP023969.1\|WP_098949854.1\|1536673_1537873_+\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340968
NZ_CP023969.1\|WP_098949852.1\|1530406_1533337_-\|sugar-binding-protein	unknown	unknown	gnl\|CDD\|226297
NZ_CP023969.1\|WP_032897659.1\|1535711_1536563_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237907
NZ_CP023969.1\|WP_098949863.1\|1547617_1549216_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP023969.1\|WP_098949867.1\|1551659_1552664_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP023969.1\|WP_032894164.1\|1533521_1533923_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP023969.1\|WP_098949859.1\|1542495_1544103_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293752
NZ_CP023969.1\|WP_098949866.1\|1550484_1551558_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
NZ_CP023969.1\|WP_098949857.1\|1541367_1541829_+\|HIT-family-protein	unknown	unknown	gnl\|CDD\|223611
NZ_CP023969.1\|WP_098949868.1\|1552855_1553329_+\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
NZ_CP023969.1\|WP_098949853.1\|1534671_1535478_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP023969.1\|WP_098952578.1\|1533923_1534646_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP023969.1\|WP_032894187.1\|1550166_1550481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032894163.1\|1529587_1530169_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369095
NZ_CP023969.1\|WP_098949856.1\|1540314_1541259_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP023969.1\|WP_098949861.1\|1545315_1546236_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098949864.1\|1549212_1550028_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	8.10205e-123
NZ_CP023969.1\|WP_098949855.1\|1537843_1540159_-\|TonB-dependent-receptor	gnl\|CDD\|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	3.9192e-55
NZ_CP023969.1\|WP_098949862.1\|1546336_1547338_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270273	cd13555, PBP2_sulfate_ester_like, Sulfate ester binding protein-like, the type 2 periplasmic binding protein fold. This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.40244e-86
NZ_CP023969.1\|WP_098949860.1\|1544227_1545133_-\|TauD/TfdA-family-dioxygenase	gnl\|CDD\|225086	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	8.01615e-95
NZ_CP023969.1\|WP_098949854.1\|1536673_1537873_+\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|340968	cd17410, MFS_CynX_like, Cyanate transport protein CynX and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Escherichia coli cyanate transport protein CynX and similar proteins. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The gene encoding CynX is part of the cyn operon that also includes cynS, encoding cynase, which catalyzes the reaction of cyanate with bicarbonate to give ammonia and carbon dioxide, and cynT, which encodes a carbonic anhydrase. The CynX-like subfamily belongs to the 2-nitroimidazole and cyanate transporters like (NIMT/CynX-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.53599e-150
NZ_CP023969.1\|WP_098949852.1\|1530406_1533337_-\|sugar-binding-protein	gnl\|CDD\|226297	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane].	9.85359e-09
NZ_CP023969.1\|WP_032897659.1\|1535711_1536563_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	9.30743e-47
NZ_CP023969.1\|WP_098949863.1\|1547617_1549216_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	8.26713e-63
NZ_CP023969.1\|WP_098949867.1\|1551659_1552664_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.1456e-46
NZ_CP023969.1\|WP_032894164.1\|1533521_1533923_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	1.47507e-41
NZ_CP023969.1\|WP_098949859.1\|1542495_1544103_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|293752	cd16028, PMH, Phosphonate monoester hydrolase/phosphodiesterase. Phosphonate monoester hydrolase/phosphodiesterase hydrolyses phosphonate monoesters or phosphate diesters using a posttranslationally formed formylglycine as the catalytic nucleophile. PMH is the member of the alkaline phosphatase superfamily. The structure of PMH is more homologous to arylsulfatase than alkaline phosphatase. Sulfatases also use formylglycine as catalytic nucleophile.	1.69292e-136
NZ_CP023969.1\|WP_098949866.1\|1550484_1551558_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	4.8293e-10
NZ_CP023969.1\|WP_098949857.1\|1541367_1541829_+\|HIT-family-protein	gnl\|CDD\|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	7.07206e-19
NZ_CP023969.1\|WP_098949868.1\|1552855_1553329_+\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	1.48353e-26
NZ_CP023969.1\|WP_098949853.1\|1534671_1535478_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.23192e-22
NZ_CP023969.1\|WP_098952578.1\|1533923_1534646_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	4.21867e-51
NZ_CP023969.1\|WP_032894163.1\|1529587_1530169_-\|alpha/beta-hydrolase	gnl\|CDD\|369095	pfam06821, Ser_hydrolase, Serine hydrolase. Members of this family have serine hydrolase activity. They contain a conserved serine hydrolase motif, GXSXG/A, where the serine is a putative nucleophile. This family has an alpha-beta hydrolase fold. Eukaryotic members of this family have a conserved LXCXE motif, which binds to retinoblastomas. This motif is absent from prokaryotic members of this family.	1.17515e-76
NZ_CP023969.1\|WP_098949856.1\|1540314_1541259_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.18804e-40
NZ_CP023969.1\|WP_098949861.1\|1545315_1546236_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.36462e-43

>NZ_CP023969.1|WP_098949857.1|1541367_1541829_+|HIT-family-protein
MDCIFCSIARGTAPAHLLWEDQTHMAFLSIFPNTPGFSVVIPKAHRGSYAFAEPDTVLCDLVIAAKKTATLLDNALKGVARTGMILEGYGVDHLHAKLFPMHGTGEGSAFKKISSTQDKYFERYEGYVSSHDAARADDTALAELAAHIRSFAE
>NZ_CP023969.1|WP_098949856.1|1540314_1541259_+|LysR-family-transcriptional-regulator
MHIDLRQLRHFIALAEQRSFVAAAAAVNLSQSAFSRSIQALEHSAGCQLVDRGRKDLAPTKQGQVLLEHARRLVSGAQQLANEISQFNGLEAGELRFGCGPAPAAGLVPRAIGSFIGRYPKARVQFQVDDWQSLSKRLLSEEFEFFVADTRHFEANPDYHTHRLRPRRWHFCCRAGHPLAARNSISAAELMSYPLAVTIRPPNLRKVIVDLSGRPDYQPNVECENGYSLMGVVLRSDAIGIVSANSDVLHMARGELVCLQIEGLDENLEERYTRYGIVSRAGYRLSPLAQAMIEQIKEIDARDEDAYALENIAV
>NZ_CP023969.1|WP_098949855.1|1537843_1540159_-|TonB-dependent-receptor
MSLFKSLPLAMLVAGSTSWSPAQAAETPAPAGKGESASGQLETVTVTARRRTESAQAVPTPMSVVGGQALETQRVYRIQDLQQLVPSVNVAYMHARQSSVSIRGLGNNPASDGLEGSVGLYIDNVYLGRPGMAVFDLMDIEQLEVLRGPQGTLFGKNTTAGVINISTRAPSFTPERSIETSLGEDGYFQTKGTISGPLTDELAGRFSAYRTRSDGDIKNEHDGHDLNGGSRQGFRGQLLYKPSDAFNLRWIGDYNEEDSSAGTRVLYSTGPTINGTNLYQSRANAAGATLVDGTHRKVNLDNDQHVTVFQGGTSLEANWTLPSDFTLTSVSSYRWWNFTPRNDDGLNVPASYNAGVSVEDKQWSQEFRLASPSGGFFDYVLGAYYFGSDLDNKSFAYYGPKADIWNGTPAGALSNVSSVGNGHIRTDSFALFAQGTWHLTERLDFTAGVRGTYEEKSAWVTRNAPVGGAAVSGAAAMARRGRTGAYDSGDLSQYSATPSGLLNLSYHFNENLLGYATLSHGEKSGGVNLAVGSAPTAGADSLLIGTERANNAELGFKSTLWDRRLQLNANLFWTQVNGYQTNAYDQDNRVQYLTNAGSVRSRGVEVESTLVPIKGLTLNINGSFNDVTYLSYKDAPCPPETSLRPGAPASCDLSGHQVVGASKWIANANGEYKWNLANGFEPYVTASYAFRSKAVGTVEDSDYGQIPAYAVVNLSTGLRGDYDQGQWDVSLWLKNAFDKTYYTTLWTGGNGGYEGLLGTPRTLGVTGRYDF
>NZ_CP023969.1|WP_098949854.1|1536673_1537873_+|CynX/NimT-family-MFS-transporter
MTLNTTLAGRLAGWGLLVVLGLNLRPILSSISPLLGEIRQATGLSFQSSALLTSLPVICMGLVALVGVRVEARLGERRGIALGLLMILLACLARWLMGQASALLVTALLGGAGVALIQALVPAMIKREFHHRVPVAMGVYSASLMAGGGLAALLSPVVATYFQQWQAGLGVWLLPALGALLLWAWLPLGAARNPQRASAFKGLRNRRAWLLALYFGLVNCGYMSMVAWLPAYYQQLGWGVLPSGSLLAFMTIFQVTAALLMPVLAQRGIDRRPLLSISLLAQTIGYLGLIIAPQEYPHLWVALCGFGLGACFALSLLLTLDHHRDPRQAGQLAAFVQGVGFLINAISPWLTGWLRELTGHFVSAWVVLTVTVVAMLLVTRVFSPATYRTDLEVVAPSHA
>NZ_CP023969.1|WP_032897659.1|1535711_1536563_-|LysR-family-transcriptional-regulator
MFDPVLLRSFVAVVDCGNFTRAAERLHLTQSTVSQQIRRLEDAVTCQLLDRDQRRVVPTTEGERLLAYARRILALHEEAADVLINQQSDGVLRLGVPEDFAAERLMPLLSAFVVAYPRVRLEVTSGLGPELQRQYRGGEFDVLLVKQMGDSDDCVASWPEPLYWVDSLSTPALGRDPLPLVAFPVGGLYRNDMLHHLERAGWRWRIGYCSASLASVCSAVAAGLGISLLPERVLQPGHRILGPESGLPPVHGVRLALYGRSGLGAAGQTLLSELLALCAGNPH
>NZ_CP023969.1|WP_098949853.1|1534671_1535478_-|energy-transducer-TonB
MGNVQTAVSAHEAQWRQAPSGELVDLGRPHRAPLGQLRLQKTPKRFSSRREGILLGLLVLALHGAVIYWVSQKPTPVLPIVPPEIPPMTIEFSQPAPPLVEPPPPAPPPVVEPPPPPPVVDELAAKPAPPKPVLKPKPAPKPAPKPVPKAVEPPPVPTPPTPAPAAAPVPVAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVQVLASGKPGEIQVQKSSGRQQLDDAALAAVKRWSFVPAKQGDVAQNGWVSVPIDFKIH
>NZ_CP023969.1|WP_098952578.1|1533923_1534646_-|MotA/TolQ/ExbB-proton-channel-family-protein
MMALASPLESIESAVIWLLVAFSVATWGLALLKGVQFGRLKAQDRKFHKQFWAASSLDAAAELAETQPGAAARVAQAGYAAIQVGDATHVADLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDFYSLAQKNAFRVLLHPTLAKASAGSPQKVKEAS
>NZ_CP023969.1|WP_032894164.1|1533521_1533923_-|biopolymer-transporter-ExbD
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTQAVAPVEQKDPLVVSIDGAGKVFINKDAIEPDLLEFNLQAAKAKDPDVRVQLQADDGVNYGEVARAMASIERAGITKLSVITAR
>NZ_CP023969.1|WP_098949852.1|1530406_1533337_-|sugar-binding-protein
MSIRFPVQVVSTFVNPPVEVEKPEEKPPVMASSNYRAPGLKHPSACILPSLADYQRKNSVLQSAQAKPVPGGVSSVLKKNADLETYISKHSSDFVTPEKEISSILTEKIKQQWGVDVDPDKTYLVTFKSDSEDEKEVVEKITLTQAALKNRQDVTIEDNENWFVKIGKYFSPVVYVYNKIDGWVQEANSRQGIYREPSAPGDAPYNADTRVSIPVDGFKSLVWDTDRTNMYKKTLDGFWDKHTDSYAALSKISFVKAINLQRLEGTLGPAETALAQRALGPVAQKDWSELTVQDFKEAAVKDPDPDLDIGLLSINGFESTDLMCVTDRKTQLTLLYIPGNSSPIHRFDNPQQISNWLAKQASDPAKRESLLSHFSLEDQAERIFSDGVRQTLVGMGTWSDHQAAGRSILGTLNGWVPERYVSVEPISNDPFEAIKVRQKARSYSDAQNAIVSDGDYNKNKALQLVEEATKVAMFMTPLALVMPEVAIALDVFFLAAGATQAGIGIDDAVKGKATASDRIVFGVLNAVPPLATHAAAPLAKVTGRMAGGGLATEVDAAAQAPAQVNEQGRPFFNPPRHVNGHIGYPLSPVSTPAILDELTLPMDGVHQMFSKDYMVFVGQYGTKVTYDIQAGLWRGLRENGQVNDLFYWRDGRGNWQVGSKAKALAGSKDSPASMINKTFKIPRLPSLPSGATEVPKVIHYFWAGNEMPEHLLENIMENSRKSPGYKSIVHVDANDAEAFQKIKAGLDHKVGGLEVHNLKEDEAFQELNAGKYGEMYQYFRSGQGQNLSASSDVMRVALMKKYGGIYLDTDDTLEFNVGEVTLKATPNDILLNSPVTYAATDFEGFNTSNFASHPGNPLFDKILEESYQRYKANESWFANHRPFLKERATAAEQQAYKAYETKIFEVTGPRMFGDVLEQEEYGIFPIINELTELMNARLLLPEDYAKNYMKVHDFYMPMSNKFGVTIGAEHSMHHSR
>NZ_CP023969.1|WP_032894163.1|1529587_1530169_-|alpha/beta-hydrolase
MHSESIRYLIVPGWQGSPEDHWQTHWQNSLPNSARVEQADWLTPRREDWVAALAEAIAADSTPVILIAHSLGCITVAHWAATAPVQVLRQVRGALLVAPADVERPACAPALRNFAPIPTDLLPFPSQVVSSDNDSAVSAPRALELARQWGAEAGILSGAGHINVKSGHRRWEQGFAYLYRLQHRLEHHARRSA
>NZ_CP023969.1|WP_098949859.1|1542495_1544103_+|alkaline-phosphatase-family-protein
MSEPKPVRNVLYIMCDQLRRDYLSCYGHAHLHTPNIDRLAAAGVRFSRAYTQGTICGPSRMSAYTGRYVSSHQVAWNAVPLPLEELTIGDYLRPHGIRTALVGKTHATPNLEALQRLQIDPDSAQAEPLNEVGFDAYLRHDGIYPDSPLFDDKRESAPYTQYLRDHGYSGRNPWHEWANAAEGENSEVLSGWHMRNAGKPARVAEEHSETVYTTDRAIDFIDEQGEQPWCLHLSYIKPHWPYIAPAPYHALYGAEHVQAPIQPEHTSDHPVYQAFRQHQESQNFSRDEVRLTVIPTYMGLIKQIDDQLGRLFDFLQGTGRWDDTLIVFTSDHGDFLGDHFLGEKEFLLEPAVGIPLIVRDPRASADVSRGTVDERLVETIDALPTFLDALGLPAADHRLEGRSLIPLLHGAQPTWRRYAIAEYDYAFQAPARERLEQPIDRCRMTMVRSERWKYLAYDGFRPQLFDLENDPQEQHDLGSDPAYAEVRETHLGYLFDWLRGLKRRTTISHTEVELRGQWFRYGEPEAEKVVKIGVW
>NZ_CP023969.1|WP_098949860.1|1544227_1545133_-|TauD/TfdA-family-dioxygenase
MSNAALAVQPIAHALDIHPVAGRIGAEIRGIKLSGELDAATVEAIQQALVQYKVIFFREQTHLDDQSQEAFAHLLGEPIAHPTVPVRDGTRFLMELDGTRGQRANSWHTDVTFVDAYPKASILRSVLAPASGGDTVWANTAAAYNDLSVELRALADHLWAVHSNEYDYAARKPDVAVEKQEEYRKVFTSTVYETEHPVVRVHPVSGEKTLLLGHFVKRLKGYSQAESAQLFNLLQGHVTRLENTVRWRWNTGDVAIWDNRATQHYAVDDYGTQERIVRRVTLKGDVPVGVQGQSSKTTKGL
>NZ_CP023969.1|WP_098949861.1|1545315_1546236_+|LysR-family-transcriptional-regulator
MDLRQLRYFIALNEHRSFVRAADAMGITQPAFSRSIQGLEQEFGCVLVDRGHKDLRPTPEGQVVLQHALSLVHGAALLSSEVTRMTKLDAGDLRFGCGPAPAVKLVPDAVARFINAHPKIRTTFQVDNWETLSRRLSREEIEFFIADIRQFEADPNFQTRALTPKRGVFFCRPGHPLLAKDSLSTNDMFDYPLAAPLISQGIRKLLANLSGRMDFSPSIQTEHFPALVSIVLQTNAIGVGTEEAFAEDIAKGALVLLHWRNLPQHMETMSARCGIVSRTGSRLSPAAKAMIEMLVEVDSQPVSVAV
>NZ_CP023969.1|WP_098949862.1|1546336_1547338_-|ABC-transporter-substrate-binding-protein
MKLPFKRLISLFAGTALAGLVHAADLKEIRIAVPDLSAGSQHSGGGITDVLREQQIFEKAFADQGIKIQWNYFKGAGPVINEAFANGQVDLAYLGDLAAIIGRSNGLDTRLLSASARGVKHYLGVVPGSGIKTLQDLKGKRVAVFRGTASQLSFDSALASQGLSEKDLKVINLDFNAAAAALAAKQIDATWGGSTLTALQAKGLAEIPLTTKDLGDAGSIQAVLVGSAKFVDDHPDAVATLLKAQQQAVQWLTDDNNKQAYIALVSGLASYPPVILTNDLKDQKLSEVFPSTLDPVFLGKLQDAVDLASREKLIRRSFQVSDWVAPGLVAAGL
>NZ_CP023969.1|WP_098949863.1|1547617_1549216_+|ABC-transporter-permease-subunit
MARISLLSLPLAAPSKGIAPRWPQLGQRVLPWLLPLTLFALWWLASRNHWMSEQILPTPALVWSSAVELAGGELWSHLAISLQRLFWGLLAGISAGAILGAFLGFSTRAERLVFPTFSALAQVPTLAWIPLFMVFFGIGETLKLVVLVKAIVVPVTLHTLVGVRDAQPNLREAARVLRLPGHLLVRRLILPAALPAFMAGVRLALAAGWTSLLAVELLASSEGIGYLMVWARQLFMLDIVFVCIVVIGVLGVVIDRGIGWLDRKWVHWPHPATAQIRRGPRYEGWQRLQPWLLPLLLLALWQAATQQGWVDPNILVSPWTVLQTTLAGALDGSLTTALGKSLGRAMGGLLLGGSLGFALGLWLGLSRRSERLFGPTLSALRQIAIFAWVPLLTAWFGLGELAKWVFIALAAFFPLFIATQRSVLNLSPQLREAAQVLRLNLWQRLRRLVLPGAASGIFAGLRLSLIYAWMGTLGAEYFMPSNGGIGSLMIGAQQLLRMDLIMSGMLLVGLTGATLNLLGQRFETRATRWRHA
>NZ_CP023969.1|WP_098949864.1|1549212_1550028_+|ABC-transporter-ATP-binding-protein
MNAPIVSFNHVGKSFDVDGFELEAIREFNLEVAEGEFVAIVGASGCGKSTLLRLLVGLDTQFRGEIRVDGNAVSGIGGERGIVFQEHRLFPWLTVAQNIGLGLVNEPLSEAERTRRINDFIELVGLTDFTRAYPHQLSGGMAQRVAIARGLVASPRILLLDEPFGALDALTRQQMQDELLAIRARARITTVLVTHDVEEAIFLADRVVVMEPRPGRIKQIVDIALPHPRQRSSFEFHQLREELLHELISDDHYQPPVREQIRDLPLAFIAC
>NZ_CP023969.1|WP_032894187.1|1550166_1550481_+|hypothetical-protein
MTVASHLMACMALSLLPMAAQAAADIAPVEHPLIEVVNKTKTPLDIIQGKWITVVLPGESQQVEDSKTRPLTIATKTREAAIRFVTLSYAKGCKAQTCLLITGE
>NZ_CP023969.1|WP_098949866.1|1550484_1551558_-|fatty-acid-desaturase
MDGTSASPQPLNAQQRSAHIREVVMAEGVRLRQRHPWLLHQDALGAGILAFALLGMLGSAVLYISGHMAWWVCLLLNAFFASLTHELEHDLIHSMYFRKQRAPHNLMMGLVWLARPSTINPWIRRHLHLNHHKVSGTEADMEERAITNGEPWGIARLLMVGDNMMSALIRLLRAKTWPHRFSILKRVLLVYAPLALLHWGAWYVFLGFHAANGIASLMGAPIQWSAGTLQVMQVIDIAAVVIIGPNVLRTFCLHFVSSNMHYYGDVELGNVIQQTQVLNPWWLWPLQAFCFNFGSTHGIHHFVVKEPFYIRQMTTKVAHKVMAEMGVRFNDLGTFTRANRYEREEQAQSQVNQAAPV
>NZ_CP023969.1|WP_098949867.1|1551659_1552664_+|AraC-family-transcriptional-regulator
MTEPTSLASWTRALRKQLDALGLDSAALCAEAGLDPQQMDDPNARYRLSATTRLWALAVQASGDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERIVRYHQVVSDALDLELSRHGDIYRFRLLQPPGSPAPAPEAIDAFAAIYVRTCRNRLGRDYAPLAVYLRRPEPTDPKPWHTVFRSPVFFAADEDRLEFAASDFDSHLDDANPELAEHNETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSAERIAQAMHLSLRSLQRHLADEGCRFDALLNECRQNLALLHLRDPQCSLAEISHLLGFADTSSFNRAFKRWTGMTPGQFRDGLQ
>NZ_CP023969.1|WP_098949868.1|1552855_1553329_+|heme-binding-protein
MYRTALFLSLAAATAAQAAPQLPRHAELDLHTARQLADASLAHCTAALTVLDRGGNLLLGLRADGVGPHNSLASQRKAYTALSTKTPTRLFAERARNNPEAANLNSLPELLLLGGGVPLFADAELVGALGIAGAGGAAQDEACAVQAAEQLGLKITP

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Crispr_ID: NZ_CP023969_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_9

3240598-3240693

Orphan

Consensus_repeat	Method
CTATCTACCTGACACCCCGCGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_9

>merge|NZ_CP023969|9|3240598-3240693|CRISPRCasFinder
CTATCTACCTGACACCCCGCGATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACGGCCTGCCAGCCGACATCTATCTACCTGACACCCCACGATC

>NZ_CP023969|9|8|3240598-3240693|CRISPRCasFinder
CTATCTACCTGACACCCCGCGATC	CAACTGTGGGAGCTGGCTTGCCTGCGATGACGGCCTGCCAGCCGACAT
CTATCTACCTGACACCCCACGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_032895481.1\|3252134_3253115_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|224219
NZ_CP023969.1\|WP_003193918.1\|3229339_3230074_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP023969.1\|WP_098950488.1\|3242977_3243919_+\|iron-sulfur-binding-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235575
NZ_CP023969.1\|WP_098950486.1\|3234915_3235671_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227049
NZ_CP023969.1\|WP_003193907.1\|3241149_3242673_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_CP023969.1\|WP_032895478.1\|3248472_3249468_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP023969.1\|WP_032895462.1\|3232095_3233025_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377694
NZ_CP023969.1\|WP_098950490.1\|3246721_3247081_+\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP023969.1\|WP_169918668.1\|3233702_3233981_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032895463.1\|3233352_3233694_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_CP023969.1\|WP_032895470.1\|3237393_3238719_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP023969.1\|WP_056789187.1\|3230063_3231533_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP023969.1\|WP_098950489.1\|3246124_3246499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003193904.1\|3244499_3245951_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP023969.1\|WP_098950492.1\|3249464_3250622_-\|DUF4350-domain-containing-protein	unknown	unknown	gnl\|CDD\|379527
NZ_CP023969.1\|WP_098950493.1\|3250618_3252148_-\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP023969.1\|WP_098950491.1\|3247133_3248465_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP023969.1\|WP_098950485.1\|3234106_3234739_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP023969.1\|WP_032895468.1\|3235772_3237092_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340925
NZ_CP023969.1\|WP_098950487.1\|3238712_3240479_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_032895481.1\|3252134_3253115_-\|stage-II-sporulation-protein-M	gnl\|CDD\|224219	COG1300, SpoIIM, Uncharacterized membrane protein [Function unknown].	1.86558e-44
NZ_CP023969.1\|WP_003193918.1\|3229339_3230074_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.01209e-80
NZ_CP023969.1\|WP_098950488.1\|3242977_3243919_+\|iron-sulfur-binding-ferredoxin-reductase	gnl\|CDD\|235575	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase.	0
NZ_CP023969.1\|WP_003193907.1\|3241149_3242673_-\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	8.39593e-145
NZ_CP023969.1\|WP_032895478.1\|3248472_3249468_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.13806e-94
NZ_CP023969.1\|WP_032895462.1\|3232095_3233025_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|377694	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus. This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain.	2.88197e-57
NZ_CP023969.1\|WP_098950490.1\|3246721_3247081_+\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	0.000147658
NZ_CP023969.1\|WP_098950487.1\|3238712_3240479_-\|sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	0
NZ_CP023969.1\|WP_032895463.1\|3233352_3233694_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	1.4726e-10
NZ_CP023969.1\|WP_032895470.1\|3237393_3238719_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP023969.1\|WP_056789187.1\|3230063_3231533_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.95953e-46
NZ_CP023969.1\|WP_003193904.1\|3244499_3245951_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP023969.1\|WP_098950492.1\|3249464_3250622_-\|DUF4350-domain-containing-protein	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	1.02756e-08
NZ_CP023969.1\|WP_098950493.1\|3250618_3252148_-\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	8.99136e-05
NZ_CP023969.1\|WP_098950491.1\|3247133_3248465_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	4.27231e-66
NZ_CP023969.1\|WP_098950485.1\|3234106_3234739_-\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	1.93531e-40
NZ_CP023969.1\|WP_032895468.1\|3235772_3237092_-\|MFS-transporter	gnl\|CDD\|340925	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters. This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
NZ_CP023969.1\|WP_098950486.1\|3234915_3235671_+\|hypothetical-protein	gnl\|CDD\|227049	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown].	3.52827e-92

>NZ_CP023969.1|WP_098950487.1|3238712_3240479_-|sensor-histidine-kinase
MIVIPRPLRLTFYSLLIIAGAVLAAALATRHAERQALVDDAARANQQLALYANSLHTLIERYRALPAVLALDSEMISALKCPLDTATQDRLNRKLERINGAAQSSTLELMDRTGLAVAASNWNLPSSYVGHNYAFRPYFSQTLSQGTGRFYAVGVTTGIPGYFLSSAVVDEHEQFLGAMVVKLEFPELEREWAQGNDLLLVSDARGIVFIANQPGWRYRNLRPLSENDLAELKATRQYDKKQLQPLDTQPLQRFDENSHLIRVNGPEGNANYIWESLPLKREGWTLHLLRKPQFAFEDQRNAGLAAAGSWLALVFLVLFLSQRWRLARLRQRSREELEQLVEERTQALRTAQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYKALTPLDDMLTRMAALTGHLKTFARKSPSGLREKLDLATVVDQSLHLLDARLRDEAIGVVLDLTRPAWVRGDAIRLEQVLINLLRNALDAMADKPRKRLEIRLHADQQLWQLSVCDSGGGIAEEHLSSVFDPFFTTKPVGDGLGLGLAVSYAIVHELGGRLSAANRGDGAIFTLTLPIAMETPDLC
>NZ_CP023969.1|WP_032895470.1|3237393_3238719_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MLNAVIVVDDEASIRTAVEQWLSLSGFDVQLFSRAEECLAQLPKDFAGVILSDVRMPGLSGLELLAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLNSLRRALDKRGLILENRRLHQQADHRAQLESSLLGVSKGLQSLRRQVLDLASLPVNVLIRGETGSGKELVARCLHDFGPRAKKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYAHGGTLFLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIHVDLRIIAATKPDLLEEARAGRFREDLAYRLNVAQLRLPPLRERREDIPLLYEHFAQSAAERLGRQVEPLSGPQLGRLLSHDWPGNVRELANVAERQVLGLDEPEPQGIEAGQSLAAQQEAFEAHCLKAALTRHKGDIKAVLAELQLPRRTFNEKMQRHGLVREMFL
>NZ_CP023969.1|WP_032895468.1|3235772_3237092_-|MFS-transporter
MDNSNTVPLGSTAAKAQERTTSSRIKSIFSGSVGNMVEWYDWYVYAAFSLYFAKAFFPKGDTTAQLLNTAAIFAVGFLMRPIGGWLMGLYADKVGRKKALMASVYLMCFGSLLIALSPGYEVIGIGAPILLVFARLLQGLSVGGEYGTSATYLSEMATKERRGFYSSFQYVTLISGQLIALAVLIVLQQVLTTEQLYAWGWRIPFAIGALCAVVALYLRRGMEETESFTKKEKAKESAMRTLMRHPKELLTVVGLTMGGTLAFYTYTTYMQKYLVNTVGMSISDSTTISAATLFLFMCLQPIIGGLSDKIGRRPILIAFGVLGTLFTVPILTTLHTIQSWWGAFFLIMAALIIVSGYTSINAVVKAELFPTEIRALGVGLPYALTVSIFGGTAEYIALWFKSIGMETGYYWYVTACIAVSLMVYVTMKDTRKHSRITTD
>NZ_CP023969.1|WP_098950486.1|3234915_3235671_+|hypothetical-protein
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSMILISVFLVTLVTQLWSKTYNPVLYWIVILSTSTAGTTMSDFMDRTLGLGYATGSMILIVILMIIFAVWHLSGDSLNVNKVQTFRGELFYWMAILFSNTLGTALGDFLADDSGLGFAGGALLIGSTIAAVVALKYFTRISSVLLFWVAFVLTRPFGATLGDFLTKPHEKGGLDFGTVGSSAVLAAVLLVMIAGASYAQRRYGRSEAAELS
>NZ_CP023969.1|WP_098950485.1|3234106_3234739_-|flavin-reductase-family-protein
MPDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSHDREGRLNLAPYSFFNAFNYIPPIIGFSSVGRKDSLNNIEQTGEFVWNLATRPLAEQMNQSCAPVSPEVNEFELSGLTPVASKIVGVPRVGESPVSFECKVTQIIQLQRADQQLVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAEPILRGGGPADYFQLGPEALFKMHRPGATKP
>NZ_CP023969.1|WP_169918668.1|3233702_3233981_+|hypothetical-protein
MADFPLARTCNMARKQFAHHEAVSAVVPGEGGYSAAVAVKALDGMGAPRFHKILDGQTFKTASDADDAATEQLGRLIDVDEEGQLSWAIAER
>NZ_CP023969.1|WP_032895463.1|3233352_3233694_+|antibiotic-biosynthesis-monooxygenase
MSTPIPASHMAFIRARSGCSTELGARLSSLIEPGRQAQGCLQFSLQHSQVDPDVWLVSGFWSSEQAMSAYFSSPALMIFTELLNDMVVRSMDFQTFTDASAVQAYGEYLQLAG
>NZ_CP023969.1|WP_032895462.1|3232095_3233025_-|AraC-family-transcriptional-regulator
MPSPESKPVPLDAEMEKQRAELASIVHRHTWEDGSYGTAITSLYLNRHNAPRDFMPVLVEPALCILASGSKEVRLADEIFAYDPLNYLVFSVAMPVAGRIIDATAEDPNLSVRINIDPAQLTALIAEAGPMGVPSRPTSRGMYVDRIDHALLDAVLRLTRLLDTPKDIAMLAPLINREILYRLLRGPQGYRLYEIAVANSQSHRVSQAIKWLNGNYEQPLRIDDLAKEVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMIAEGLEASAAGYRVGYESPSQFSREYSRLFGAPPLRDLARLRQSI
>NZ_CP023969.1|WP_056789187.1|3230063_3231533_+|HAMP-domain-containing-protein
MPTEPLNERRRRLPVPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHSMTASVSYFRSLPVAYRPLVLDQLRSMGGTRFVVTLNDRPLDMQILPETPRKQAVLVAVDEVLRQTLGADVHISVEFVSAEDLRIFNAGLKLDELPRSWAHYALTLEPVNPPVLVTQIQLAPGEWLYIASLLPEPYTSLEEQGLPSQQVWFIVLTSGFLLLFIGLLVHWQSRPLKRLARAARDMSLGADVEPVAEGGGSEVVEVGRAFNAMRERISRYLTERSQLFSAISHDLRTPITRLRLRVELLEDENLQNKFGRDLDELELLVKGALQCVKDTDIHENIQPVDLNHVLECLVEPYLAPHGNGRVTLDGAALSAYPGKPLALKRCIGNLIDNALKYGQNAHLHIEDDGVQFILHVDDEGPGVPQQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSHGGEVSLQNLREGGLRVTLQLPRGLD
>NZ_CP023969.1|WP_003193918.1|3229339_3230074_+|response-regulator-transcription-factor
MSVISKSILLVDDDQEIRELLQTYLSRAGFQVRGVSDGAGFRQAMNEAPCDLVILDVMLPDEDGFSLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRRCQFGQERSSGGDVWVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASVVAGNAH
>NZ_CP023969.1|WP_003193907.1|3241149_3242673_-|fumarate-hydratase
MTVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSIAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMGLDDMINEGVRRAYNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGNTVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMESIDIHELKKRGPQNRIEEMRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPASLEAPPLDAYPEIVWEAGPSARRVNLDTLTPEEVQSWKPGETVLLNGKMLTGRDAAHKRMVEMLNKGETLPVDLKGRFIYYVGPVDPVREEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERGPTAIEAIKDHKAVYLMAVGGAAYLVAQAIKKSRVVAFAELGMEAIYEFDVKDMPVTVAVDSKGESVHITGPAIWQKKISDSLAVEVQ
>NZ_CP023969.1|WP_098950488.1|3242977_3243919_+|iron-sulfur-binding-ferredoxin-reductase
MPELYVGERHWSVTSGSNLLDALNQAGVAVPFSCRAGSCHACLVRCEGEVDDQQPEALSPTQRQQGWRLACQCRVSADLKVEAFDPQRDGVPSQVVGADWLSSTVLRLRLQPERALRYSAGQHLVLWAGQVARPYSLASLPQEEPYLEFHIECRQPGAFSDAARQFKVGEPLRLGELRGGALHYDPDWQSRPLWLLASGTGLGPLWGVLREALRQDHQGEIRVIHLAHEAEAHYLAEPLAALAAQHGNLTVELWTTAQLQSALAQLRLVSRQTLALLCGHPASVEAFSKRLFLAGLPRNQLLADVFLSRPFTL
>NZ_CP023969.1|WP_003193904.1|3244499_3245951_-|pyruvate-kinase
MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVALLGDLQGPKIRIAKFTNKRIELKIGDKFTFSTSHPLTEGTQDVVGIDYPDLVKDCGVGDELLLDDGRVVMRVDTATPTELNCTVIIGGPLSDHKGINRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARKLRDEAGGTAWLVAKIERAEAVADDETLDGLIKASDAVMVARGDLGVEIGDAELIGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESAAGPYPLEAVQAMARICVGAEKHPTSKTSSHRIGKVFESCDQSIALAAMYTANHFPGVKAIIALTESGYTPLIMSRIRSSVPIYAFTPHREAQARAAMFRGVYTIPFDPASLAPNEVSQKAIDELVKRGVVEKGDWVILTKGDSYHTTGGTNGMKILHVGDPQV
>NZ_CP023969.1|WP_098950489.1|3246124_3246499_+|hypothetical-protein
MRILLVAALAASVVGCTRWSMDHHLNNAYRAYGVGDCQRVTLELSQVDRESRTRRYVQPEVSMLRGQCLERQKLFVDAAQTYQFIIGHYPSSEYAYRARARLDTLQQLGHLPAAGLAKPRPASL
>NZ_CP023969.1|WP_098950490.1|3246721_3247081_+|PilZ-domain-containing-protein
MFTERRIERHQLPYFLQVFNRITDKPIGFLGNVSENGLMLISSLPMMTEVDFELRLKVPAAQGEFKVIDLTATCLWSHEDVTPQHYDSGFSVLEAPEEYRHLINALLQYFSFYPLQASV
>NZ_CP023969.1|WP_098950491.1|3247133_3248465_-|DUF58-domain-containing-protein
MKPTRLLLTWLGVLLGLNILLGTSAALQLKVPATLHSLAWGLLLALLLLAMLDAARLRRRPSARVYRALPGSLALGRWEEIRLCLEHDYPQPLTAQVFDHVPDGLAVENLPQSIQLRPGERAELGYRVRPLRRGHFHFSRCELLLPSPLGLWSARRWVDTHDATRVYPDFARLYGAQLRGVDNWLSQLGVRQHQRRGLGLEFHQLREFREGDSLRQIDWKATARQRTPIAREYQDERDQQIVFMLDCGQHMRSQDDELSHFDHALNACLLLSYVALRQGDAVGLCTFASDQPRYLKPVKGSGQLNLLLNAVYDLQTTRKTADYQAAASQLLARQKRRALVIIVTNLRDEEDEALMAAVQRIGRHHRVLVASLREEVLDQLRQAPVQTLPEALAYCGTVDYLNTRNQRHDRLSAHGLSVLDTLPSALGAGLVTRYLEWKKAGVF
>NZ_CP023969.1|WP_032895478.1|3248472_3249468_-|MoxR-family-ATPase
MSDSPRATALTAENLQHASQQAQALRVELRKAVIGQDAVIDDVLTALIAGGHVLLEGVPGLGKTLLVRALARCFGGDFARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLLADEINRAPAKTQAALLEAMQERQVTLEGEALPIGQPFMVLATQNPIEQEGTYPLPEAELDRFMLKVRMDYPDALQELDMVREVTRSSKADMLEVQPLRTVLQAEDVVTMQQIASDLPLDEQVLDYAVRLARATRSWPGLAIGAGPRASIALVRGARARALLRGGEFVTPDDIKGCALAVLRHRVRIAPELDIDGLEVDQVLQQLLDQIAAPRQ
>NZ_CP023969.1|WP_098950492.1|3249464_3250622_-|DUF4350-domain-containing-protein
MNRALWWVALLLACLLGAGGLYAWHKAIPYDEVVDRGPSPEARANPYLAAEHFLRQQGVVVAHANGLERLAELPAKDHSLLLLGERSNMTPRQVEQLLGWAKAGGHLLLVAEALWDEETGTSGDLLLDRLTVRQTLSDTFDEPAPPRKKTKPDLTKLYVDNETAPAYFSFDTDFNLTDPKHLAQFSANSAKSSHLMQLELGQGRVTVITDSDLWKTADIGKHDNAWLLWYLNQGTDVTLLFNSDTDDLFTLLLRNFPQALVALVALLALGLWHAGMRQGPIQAPAPKARRQLQEHLKASADFLLRRSGQGTLLKALQNDILRAARRRHPGFEHLDAPGQRQVLEHLTRQPPHIISQALEPVALKRLSSADFSRQVACLQTLRNAL
>NZ_CP023969.1|WP_098950493.1|3250618_3252148_-|DUF4129-domain-containing-protein
MRLTDASVVIRPRTSWEAMDLGVLMAREHRALLMGSWALVSLPVFSLLTVLLWNYPSLAMFLFWWLKPAFDRLPLYILSKALFGERPSLKQAVRHWPQLLKGQLFASLTWRRLSMSRSFTLPISQLEGLDGDARQRRLGVLLQRNAGAARWLTTIGVHLEIGLWFGAMALFYLFIPQQIELDWDWQRLILASGSDVLWLEHLGNAFYALILVFWEPIYVACGFSLYLNRRTVLEAWDLELVFRRLRQRLSNVAPLLLLVVGLALLHVSPPAMADEATAHKPLSTQAASQSIQALLEKPPFKNPETVTRYRFGEEKAPVKNKAKGDGKLPGWLQALLDNFNSDTFKYVAKTLEILLWSLVIGGLALVCWRYREWLRTFVSRLGPTRTAAPSPVPAQLFGLELGTETLPEDIASTAEQLWPTQPREALGLLYRGLLSRLLHEFDLPLTSADTEGQVLERVHHLQQPQLLAFSDELTRHWQNLAYGHRLPPSSAQQKLCSDWRALFSDGASQ
>NZ_CP023969.1|WP_032895481.1|3252134_3253115_-|stage-II-sporulation-protein-M
MKQSLFESRHQHQWQTFAEQLTQLEQGKAEAADVADFPHQYRRLCQHLALAQQRGYSSYLVDPLQQLALRGHQQLYRHRSHLTANILAFLLAGFPRLVREQWRFVLIAGLLFFGSLVGIALLVYLFPDLVYSIISPQQVAEMQGMYNPDASRLGRAAERAASEDWMMFGYYVMHNIGIAFQTFAAGLLFGLGSVFFLIFNGLVIGAVSGHLTDIGYGQTFWSFVMGHGAFELTAITLAGAAGLQLGWSLVAPGRLARSEALRLAARKSVRMLCGVMVFLLIAAFIEAYWSSTTGIEPWIKYAVGVALWLLVAAYLTLAGRSRHAPD

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Crispr_ID: NZ_CP023969_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_10

3540327-3540437

Orphan

Consensus_repeat	Method
TGTAGCTTAGTTGGTTAGAGCGCACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_10

>merge|NZ_CP023969|10|3540327-3540437|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCCATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCC

>NZ_CP023969|10|9|3540327-3540437|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCC	ATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTC
TGTAGCTCAGTTGGTTAGAGCGCACCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_014719584.1\|3546610_3547081_-\|flagellar-protein-FlgN	unknown	unknown	gnl\|CDD\|377465
NZ_CP023969.1\|WP_098950608.1\|3533081_3533264_-\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366059
NZ_CP023969.1\|WP_014719585.1\|3545764_3546514_-\|flagellar-brake-protein	unknown	unknown	gnl\|CDD\|227868
NZ_CP023969.1\|WP_098950610.1\|3536491_3537925_-\|integrase-family-protein	unknown	unknown	gnl\|CDD\|271182
NZ_CP023969.1\|WP_098950605.1\|3525737_3527960_+\|Mov34/MPN/PAD-1-family-protein	unknown	unknown	gnl\|CDD\|379614
NZ_CP023969.1\|WP_137203965.1\|3533503_3533704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098950607.1\|3531571_3532318_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098950609.1\|3535675_3535987_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235572
NZ_CP023969.1\|WP_003193578.1\|3548433_3549366_+\|chemotaxis-protein-CheV	unknown	unknown	gnl\|CDD\|381151
NZ_CP023969.1\|WP_044267590.1\|3550955_3551399_+\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|235556
NZ_CP023969.1\|WP_014719581.1\|3549408_3550236_+\|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl\|CDD\|224271
NZ_CP023969.1\|WP_178081023.1\|3528024_3529155_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_CP023969.1\|WP_032895647.1\|3547594_3548359_-\|flagellar-basal-body-P-ring-formation-protein-FlgA	unknown	unknown	gnl\|CDD\|180794
NZ_CP023969.1\|WP_032895651.1\|3551415_3552141_+\|flagellar-hook-assembly-protein-FlgD	unknown	unknown	gnl\|CDD\|235847
NZ_CP023969.1\|WP_178081024.1\|3530658_3531522_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293817
NZ_CP023969.1\|WP_138183535.1\|3529188_3530589_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293817
NZ_CP023969.1\|WP_098952631.1\|3533963_3535319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003193573.1\|3550544_3550952_+\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|180196
NZ_CP023969.1\|WP_098950612.1\|3547129_3547453_-\|flagellar-biosynthesis-anti-sigma-factor-FlgM	unknown	unknown	gnl\|CDD\|274802
NZ_CP023969.1\|WP_098950611.1\|3544332_3545706_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_014719584.1\|3546610_3547081_-\|flagellar-protein-FlgN	gnl\|CDD\|377465	pfam05130, FlgN, FlgN protein. This family includes the FlgN protein and export chaperone involved in flagellar synthesis.	6.82719e-19
NZ_CP023969.1\|WP_098950608.1\|3533081_3533264_-\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|366059	pfam00376, MerR, MerR family regulatory protein.	1.54699e-06
NZ_CP023969.1\|WP_003193578.1\|3548433_3549366_+\|chemotaxis-protein-CheV	gnl\|CDD\|381151	cd19924, REC_CheV-like, phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins. This subfamily includes the REC domains of Bacillus subtilis chemotaxis protein CheV, Myxococcus xanthus gliding motility regulatory protein FrzE, and similar proteins. CheV is a hybrid protein with an N-terminal CheW-like domain and a C-terminal CheY-like REC domain. The CheV pathway is one of three systems employed by B. subtilis for sensory adaptation that contribute to chemotaxis. It is involved in the transmission of sensory signals from chemoreceptors to flagellar motors. Together with CheW, it is involved in the coupling of methyl-accepting chemoreceptors to the central two-component histidine kinase CheA. FrzE is a hybrid sensor histidine kinase/response regulator that is part of the Frz pathway that controls cell reversal frequency to support directional motility during swarming and fruiting body formation. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.09871e-51
NZ_CP023969.1\|WP_098950609.1\|3535675_3535987_+\|hypothetical-protein	gnl\|CDD\|235572	PRK05708, PRK05708, putative 2-dehydropantoate 2-reductase.	0.00132521
NZ_CP023969.1\|WP_178081024.1\|3530658_3531522_-\|hypothetical-protein	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	1.87269e-09
NZ_CP023969.1\|WP_014719585.1\|3545764_3546514_-\|flagellar-brake-protein	gnl\|CDD\|227868	COG5581, COG5581, c-di-GMP-binding protein [Signal transduction mechanisms].	1.17476e-46
NZ_CP023969.1\|WP_098950605.1\|3525737_3527960_+\|Mov34/MPN/PAD-1-family-protein	gnl\|CDD\|379614	pfam14457, Prok-E2_A, Prokaryotic E2 family A. A member of the E2/UBC superfamily of proteins found in several bacteria. The active site residues are very similar to the eukaryotic E2 proteins. Members of this family are usually fused to E1 and JAB domains C-terminal to the E2 domain. The protein is usually in the gene neighborhood of a gene encoding a distinct metallobetalactamase family protein.	2.91089e-22
NZ_CP023969.1\|WP_098950612.1\|3547129_3547453_-\|flagellar-biosynthesis-anti-sigma-factor-FlgM	gnl\|CDD\|274802	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM. FlgM interacts with and inhibits the alternative sigma factor sigma(28) FliA. The C-terminus of FlgM contains the sigma(28)-binding domain.	3.92771e-21
NZ_CP023969.1\|WP_014719581.1\|3549408_3550236_+\|protein-glutamate-O-methyltransferase-CheR	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.43389e-103
NZ_CP023969.1\|WP_044267590.1\|3550955_3551399_+\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	2.96192e-69
NZ_CP023969.1\|WP_178081023.1\|3528024_3529155_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	6.54325e-10
NZ_CP023969.1\|WP_032895651.1\|3551415_3552141_+\|flagellar-hook-assembly-protein-FlgD	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	1.75751e-73
NZ_CP023969.1\|WP_098950610.1\|3536491_3537925_-\|integrase-family-protein	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.03058e-13
NZ_CP023969.1\|WP_138183535.1\|3529188_3530589_-\|hypothetical-protein	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	5.98096e-05
NZ_CP023969.1\|WP_032895647.1\|3547594_3548359_-\|flagellar-basal-body-P-ring-formation-protein-FlgA	gnl\|CDD\|180794	PRK07018, flgA, flagellar basal body P-ring formation protein FlgA.	3.38845e-91
NZ_CP023969.1\|WP_003193573.1\|3550544_3550952_+\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|180196	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed.	6.04122e-68
NZ_CP023969.1\|WP_098950611.1\|3544332_3545706_+\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.52758e-100

>NZ_CP023969.1|WP_098950610.1|3536491_3537925_-|integrase-family-protein
MAGNSHDKRVNDQRLRGLGDGGTLTESMLGRGTGSILFKKIGAVTTAYYRWTINKKAGLLSIGQYRSTPNAPGLTLAEIREKARDLVAILLEHGNPKAYLEKNAAQEEAQRVVDAKIADDASRVGTFQDLLDNYCDDLLARGRVKAKQVAGMFKLHVSTPFPELVAKPARDITVYDITTILKHVLAGKPKNRGKNHTTPAPASNMRSTTDTLHGYLSTAFEKARSSITSLERKVEDSKSFDITSNPVSGVGGLEDVYKGDTESLEQAELAELLIYLDTLPDRQRAIALAPIYFGGQRLKMLAALKWERVSDDGITLIDIKGKGRPRLYFLPFTPRITEIIKPLLDLRLSAEGPFALTHNLIRADAFSKVFSEAGTRLSEAGGSDEAASETRYFTWKNIRVSAETMLAGIGISQEIRAHILSHGRSSVQNKFYDRNSYLVEKRDALTKWGNFLDDIRQRKYRPDLKIQSLSELRGDDH
>NZ_CP023969.1|WP_098950609.1|3535675_3535987_+|hypothetical-protein
MARKSRFYNVFVRNGYGEQQHVVPAQTEAHAREYFSSSTENAYKAQHLGFFDVTLQGDPSSGIHFWATIEGYDYRYEQGDAGFGYLEFLFKKPFDNMLDEMLG
>NZ_CP023969.1|WP_098952631.1|3533963_3535319_+|hypothetical-protein
MRLFDKAEKFTAEAATTGSMLTYFHEHVHYFQTLFTGYGHIQWSSYRQASGFMRRRWEEMWPVMGGPRIPLANCNTRLDVHQYARYLYLVFAEQNKMSQARFITIPGAKTIDALKLTLIKQSWQINPEIETAHGPRELCTKDILEGHAFFLERSFGNQILAMPQDVAWDRSGVPDVYTTAYDWFVERCGESARELFPILCDLSLQTSWEPVIPSTTEEWQASNPSWRFYSLTEALAAAPEIILDMEGGWQKRYVAFCDQLLESCQFKGLNQILSERLQALINLERHPGISPMQRIMKKALELRIDQPWMSVYPTRTQFELMKLFEEFRIPAVLVDGRYQAQSSLNDDMVTELIGELHYQAFNDQLLGNPSAFARDSNSIECGFSKFEVHNGCPFQMSGECIGRFDPREGLPIPPSQDAAGNIEGCTFGALFQYSGIRVEDLLVDYSARFDT
>NZ_CP023969.1|WP_137203965.1|3533503_3533704_+|hypothetical-protein
MFIRKLELDSYLEKTGQSLLYRRFANRGFFDLRGDTGSQIDLRAFLKYNPQGGFGVVHEESEAFNC
>NZ_CP023969.1|WP_098950608.1|3533081_3533264_-|MerR-family-DNA-binding-transcriptional-regulator
MNEVISDRFLSIKQAANLFNVSTRTIGRWEKAGQLPPKTRLSHKTVGWRASRFQEFMDTL
>NZ_CP023969.1|WP_098950607.1|3531571_3532318_-|hypothetical-protein
MEIFGQFDTYSLKARVFPALIAGFPTLLLLFVLVPWDHLALSQVIAASMGLVLLFAFADMARHRGKKLQERLGTGETPGQWLRGNPDVPEGSKDRYRSFVADQLRLPAPTLEDEKSYPEGAADFYRSANAWLREETRDHVKYDLLFGENVTYGFRRNLLGLKPTALLCNLVVLVLCGGILYLRPSYFVALPNIDEKVYLAVSAVFLHSAYLMVAVHKSAVREASHAYGRQLILSCEALIRSQKSNTND
>NZ_CP023969.1|WP_178081024.1|3530658_3531522_-|hypothetical-protein
MFYIKHNSDNFTIIDCQLFGDHKEWLVEELIQESKDKGIKRFISTHPDEDHLLGIEHLDAKMPIQKFHVVKTDANKPNETESFLYYKKPRDGEKAFYVHKGCTRKWINVGDDKRDTSRLSFQWPDLDNKDFQEALRASTDGKAFNNTSLVVRYSIKNGPSFLWLGDLETGFMEKIFDHIELPETTIVFAPHHRRDSGKLPGKWLEKLKQKIIVIGEAPSRHLTYYQGYKKIMQNKAGDMTFIPDGRKTHCYASWDTYGKRDWLTDEGRPNEDFGIRDLDYYIGTLNF
>NZ_CP023969.1|WP_138183535.1|3529188_3530589_-|hypothetical-protein
MAIRIKQVYHPVGHGTFHTGTAWSEKDGIFRWAYDCGSKREKHLGTIIEYRARYSHWWRHDAAVDLLVISHFDNDHVNGVEQFLKTWKVKWLALPYIPLAQRLESASDHGGTSCSASTALFQLDPELWLVSRGLEGRVERILHVKGGPQKAPEDPEPRYPSAPLNEPGESAEPEIDALEKELIQIWRHGVSELDTLTTQEDISINDSTKSAGHYTLNHHQAFKALNSNIEFIFYNSDEPNLCTRLESGKLVAKRSGTEMSTVSDEIQKVVNEYKIGLTDAPPRPNWRKKLRYVYDHHFGKSSKKRNSISLCLYTRPIAAEPMAFDRGAGHFTNRYANLCLGDLTINPYTIKSLKSHLGEQRWEALSTVQVPHHGSRHSWHAGAANYFSAPYFVHCIPNTSPHHPHPEVIADLEPLELNITECSKRMTLNANYDLGVCSKIRMDDIYSASPGNIRLDVGPWCCFLCE
>NZ_CP023969.1|WP_178081023.1|3528024_3529155_+|patatin-like-phospholipase-family-protein
MAFHLGCLRALHDLGILQRVSAITAVSGGSVLAGLYCSHPGDFEDFEARVREILRQGFVMPALKRMVTSLDGVKAVAYATALGLERSVALFWRLRLKISKDDKPGDHWPNSSPFLRKASRTTILRNVFSETFRGAKLRDLRRDRPDLIVIACELRAKAAFYYTRESLHCWRYGSVNSDGVELADAVIASAAYPAALPALDQRLNFVNDKGVLTPHRVTLTDGGVYDNLGLAPLWPTRDYEGSLKVARHDRIIACRAGYGLNVTEPSSVWMSRMGAAFESVFARAQNLATNRLFDLYRAKELKGVLLPYLGQDDSKLQFPFPDMVSGEKTAGYPTNFRAMDKEWIERLVRRGEQIVHAQIKEHWQTYMSSLPVAAAV
>NZ_CP023969.1|WP_098950605.1|3525737_3527960_+|Mov34/MPN/PAD-1-family-protein
MTGQFDAPRSRLARSVVQYLLESESYPYATLLSVSQDGAQDRLDIELELGLEQRRQVPICSREPISIVFMTNDDSWPPRVRSERADFPVGMVHTNIDPDTDGGLCLCIWEENWSDLATGLTGQVLIERIRSWFSSMAAGTIHDDEQNLEPLIHPGAHTLIVPPGRIDGTWHAQWAVENGGRYAVAVGPQPPKEGGKIKFAVYARRLPSQVHRGLALTPYDLGALHKLTEGFGFDLIGDFADWLKEPEQLEKATERLPILLLMVPKRRINEGDDEEVEVWCYSYLESLAILGERLSITATMAGVTTITVLGTTHGVDLASIRLEPWRVVTRLNRASARKFSGIDRPKDVRFLGIGAGAIGSNVAMVTTRSGLGTWTVVDNDILLPHNVVRQVQRDGAVGFRKAEILRHELDNVLAATGNEFIAVDVFNPGGDAQVLDAALRSAEITVDFSASPAVVSWLSDQPANRVVSAFFGPSGSDLVVLAESLSRATRIDEIEAQYFWTVANEEKLKGHLAAARMDRIRYANACQDLSRPLPPWQVHTLCGLAAGRLTQIVDEENASFRAWRMDTVSGAVDSVAVPVHPAHRFRNGGMRVTVSDDVVQTMRELRRQSGRNETGGVLIGSFDLVRNVLHIVAALPAPLDSKRSPTYFIRGIKDLKPRIEAISEASAGRLHYVGEWHSHPGAVMARPSRDDEEVYGHLTKHLDPAGSPYVMVICGERDSWLRAGWQERGVLEGVVTHDRK
>NZ_CP023969.1|WP_098950611.1|3544332_3545706_+|MFS-transporter
MRQIWKSFRALYFASLMMLIGSGLLSTYLALRLAADNVDSLWVGALMAANYFGLVLGGKLGHRLIARVGHIRAYATCAGIVGAAVLGHGLVDWLPAWIVLRMIVGLGMMCQYMVIESWLNEQADAKQRGVVFSGYMIASYLGLVLGQLILVMHPHLGLELLMLVALCFALCLVPVAMTRRIHPAPLHPAPMEPRFFIKRVPQSLSTVLGAGLIVGSFYGLAPLYASQQGLTTEQVGLFMGSCIFAGLVVQWPLGWLSDRYDRALLIRCFALCLAITALPLAIMTQVPLEVLFVAGFFCSLVQFCLYPLAVAFSNDHVEGDRRVSLTAMLLVTYGIGASVGPLLAGVVMKLFGSQMLYAFFSLCALILVWRIRPKAVTNLHQVDDAPLHHVAMPDSMSSSPLVAALDPRVDEQVVQEQMQVTVPDPEPAPEIEEPTSEEPHEPPDPDEHPHDLSRARP
>NZ_CP023969.1|WP_014719585.1|3545764_3546514_-|flagellar-brake-protein
MFNALNAEDAPQPPKVLTTPLEIASTLRMLQESHDPLIITFHERSQRFQSYLVDIDRDSKTLVLDEMIPRDGERYLENGEAFRIEGFHEGVRVAWESNGTLTISEKGGHRIYSGSLPGEVVYHQRRNAFRAALKLAQLVDIQLGGEKLKAPISGKLLDISATGCKLRFEGDISERLQLGQVYDRFIAALPFGSMTTSVELRYLHFEDKINTTFAGVRFHNMSGLVQRQVERFVYQLQREARRFDKDDDL
>NZ_CP023969.1|WP_014719584.1|3546610_3547081_-|flagellar-protein-FlgN
MHHDEHLLQLIIDDLAPTQQLLELLKEESLALYGRDMPLLEEILARKQSLIVLLEQHGKKRSEILISLGLPADHDGLAQLASHSSVGDQLLAQSKELNHLLAQCQEANLLNGQSIQLQQATTANQLRILHGGEPPALYNAQGSTSRLVKPSTRSQA
>NZ_CP023969.1|WP_098950612.1|3547129_3547453_-|flagellar-biosynthesis-anti-sigma-factor-FlgM
MVIDFNRLNNAPALPGNTRTGGAKDSVETKAQPLPAKTEQAAVSQSGESVHLSNEAQQLQKVTDSLRDQPVVNKARVAELKQAIADGSYKVDSNRVASKLLNFEAER
>NZ_CP023969.1|WP_032895647.1|3547594_3548359_-|flagellar-basal-body-P-ring-formation-protein-FlgA
MDIKTTVSRHPGRSRYRRLLCAAMALLVSGLGVTARADNVTLPDLLIGVTQGFLEFTVEDYLATTQTPGRYEIQVNQLDPRLRMPLCDKELTATLESPAQPIGRVTVKVRCEGASPWTVFVPAQVKLFRDVVVVARPLKRTGIIGYDDVALRERDISLINQGYLTSLDQAVGQKLTRPVVTDQVLTLVHLEQAEVIRKGDQVVISASSGGLNVRMPGEALSNGGMSEQIRVKNLNSNRVIKARVTAPGQVEVAL
>NZ_CP023969.1|WP_003193578.1|3548433_3549366_+|chemotaxis-protein-CheV
MAGVMDSVNQRTQLVGQNRLELLLFRLDGNQLYGINVFKVREVLQCPKLTIMPKSSPVVCGVANIRGATIPILDLAMATGAAGLQDRQNPFVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGRDHYLTAVTRVDNQLVEIIDVEKILAEVAPTSETISVGVVDAETAHKAVSLRVLTVDDSSVARKQVTRCLQTVGVEVVALNDGRQALDYLRKLADEGKKPEEEFLMMISDIEMPEMDGYTLTAEIRNDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVVDRIKAADHG
>NZ_CP023969.1|WP_014719581.1|3549408_3550236_+|protein-glutamate-O-methyltransferase-CheR
MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELVQRIQGQPRSGLKEMVVDAMTTNETLWFRDTYPFEVLKNKVLPEAIKASPGQRLRIWSAACSSGQEPYSISMSIDEFERTNMGQLKAGAQIVATDLSGTMLTNCKTGEYDSLALGRGLSQERLQRYFDPKGAGRWAIKAPIKNRVEFRSFNLLDSYASLGKFDMVFCRNVLIYFSAEVKKDILLRIHGTLKRGGYLFLGASEALNGLPDHFQMVQCSPGIIYQAK
>NZ_CP023969.1|WP_003193573.1|3550544_3550952_+|flagellar-basal-body-rod-protein-FlgB
MSISFDKALGIHEQALGFRAQRAEVLANNIANADTPNYKARDLDFSAVLAAQQDKTKNGTFALNMTNSRHIEAQGLSKGDESLLYRTPMQPSIDQNTVDAQLEQSNYAENSVNFQASFTLLNSKFKGLMSALRGE
>NZ_CP023969.1|WP_044267590.1|3550955_3551399_+|flagellar-basal-body-rod-protein-FlgC
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQASGSDSLFQNQDAAGSGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
>NZ_CP023969.1|WP_032895651.1|3551415_3552141_+|flagellar-hook-assembly-protein-FlgD
MAIVDTSNNTAVQDLFNSKVKTATNNSSVSDASKTATGNQSLGKDAFLQLLVTQLKNQNPLSPQDNGAFVAQLAQFSSLEGINTLNDSVNNISSNFSSSQALQASSLVGRSIIIQTDKAMVDTSKSMTGSVDVTAAVGNVSVKITDKDGNVVRTVDMGAQSAGAQSFIWDGKNDKGEVAPAGTYTFNATTKNDKGDAVALTTSLPATVTSVTLSKTGGEMLLNLAGGMGSVKLSQIQTIGT

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Crispr_ID: NZ_CP023969_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_11

4245625-4245728

Orphan

Consensus_repeat	Method
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_11

>merge|NZ_CP023969|11|4245625-4245728|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCTACTAGCCGACGCCTATCAACCTGACACTCCGCAATTAAACTGTGGGAGCGGGCTTGCTCGCGAAGGCGGCCT

>NZ_CP023969|11|10|4245625-4245728|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCT	ACTAGCCGACGCCTATCAACCTGACACTCCGCAATTAAAC
TGTGGGAGCGGGCTTGCTCGCGAAGGCGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098950871.1\|4237590_4238787_+\|type-II-secretion-system-inner-membrane-protein-GspF	unknown	unknown	gnl\|CDD\|273980
NZ_CP023969.1\|WP_098950882.1\|4255107_4256313_-\|DUF1835-domain-containing-protein	unknown	unknown	gnl\|CDD\|378075
NZ_CP023969.1\|WP_098950879.1\|4251616_4253200_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224152
NZ_CP023969.1\|WP_047711276.1\|4249888_4250662_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP023969.1\|WP_032896314.1\|4238807_4239218_+\|type-II-secretion-system-major-pseudopilin-GspG	unknown	unknown	gnl\|CDD\|377975
NZ_CP023969.1\|WP_098950881.1\|4254684_4255104_+\|chemotaxis-protein-CheY	unknown	unknown	gnl\|CDD\|170568
NZ_CP023969.1\|WP_098950880.1\|4253676_4254513_-\|acid-phosphatase	unknown	unknown	gnl\|CDD\|319836
NZ_CP023969.1\|WP_169918401.1\|4246511_4248905_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP023969.1\|WP_032896321.1\|4239976_4240585_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|181557
NZ_CP023969.1\|WP_056787120.1\|4239225_4239651_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|227305
NZ_CP023969.1\|WP_032896335.1\|4253211_4253634_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100008
NZ_CP023969.1\|WP_098950875.1\|4243351_4245478_+\|type-II-secretion-system-secretin-GspD	unknown	unknown	gnl\|CDD\|274175
NZ_CP023969.1\|WP_032896325.1\|4241279_4242272_+\|general-secretion-pathway-protein-GspL	unknown	unknown	gnl\|CDD\|377469
NZ_CP023969.1\|WP_032896341.1\|4256598_4257675_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381317
NZ_CP023969.1\|WP_098950878.1\|4250680_4251604_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270225
NZ_CP023969.1\|WP_098950874.1\|4242845_4243346_+\|general-secretion-pathway-protein-GspN	unknown	unknown	unknown
NZ_CP023969.1\|WP_098950872.1\|4239647_4239980_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP023969.1\|WP_098950877.1\|4248924_4249896_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP023969.1\|WP_098950873.1\|4240581_4241283_+\|general-secretion-pathway-protein-GspK	unknown	unknown	gnl\|CDD\|225698
NZ_CP023969.1\|WP_032896326.1\|4242246_4242849_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|371216

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098950871.1\|4237590_4238787_+\|type-II-secretion-system-inner-membrane-protein-GspF	gnl\|CDD\|273980	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F. This membrane protein is a component of the terminal branch complex of the general secretion pathway (GSP), also known as the"Type II" secretion pathway. The GSP transports proteins (generally virulence-associated cell wall hydrolases) across the outer membrase of the bacterial cell. Transport across the inner membrane is often, but not exclusively handled by the Sec system. This model was constructed from the broader subfamily model, pfam00482 which includes components of pilin complexes (PilC) as well as other related genes. GspF is nearly always gene clustered with other GSP subunits. Some genes from Xylella and Xanthomonas strains score below the trusted cutoff due to excessive divergence from the family such that a sequence from Deinococcus which does not appear to be GspF scores higher. [Protein fate, Protein and peptide secretion and trafficking].	5.13545e-134
NZ_CP023969.1\|WP_098950882.1\|4255107_4256313_-\|DUF1835-domain-containing-protein	gnl\|CDD\|378075	pfam08874, DUF1835, Domain of unknown function (DUF1835). This family of proteins are functionally uncharacterized.	1.0705e-13
NZ_CP023969.1\|WP_056787120.1\|4239225_4239651_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|227305	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion].	3.14815e-09
NZ_CP023969.1\|WP_098950879.1\|4251616_4253200_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|224152	COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism].	2.25039e-62
NZ_CP023969.1\|WP_047711276.1\|4249888_4250662_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.69329e-142
NZ_CP023969.1\|WP_032896314.1\|4238807_4239218_+\|type-II-secretion-system-major-pseudopilin-GspG	gnl\|CDD\|377975	pfam08334, T2SSG, Type II secretion system (T2SS), protein G. The Type II secretion system, also called Secretion-dependent pathway (SDP), is responsible for the transport of proteins across the outer membrane first exported to the periplasm by the Sec or Tat translocon in Gram-negative (diderm) bacteria. The T2SG family includes proteins such as EpsG (P45773) in Vibrio cholera, XcpT also called PddA (Q00514) in Pseudomonas aeruginosa or PulG (P15746)in Klebsiella pneumoniae. The PulG is thought to be anchored in the inner membrane with its C-terminus directed towards the periplasme. Together with other members of the Type II secretion machinery, it is thought to assemble into a pilus-like structure that may function as a dynamic mechanism to push secreted proteins out of the cell. The polypeptide is organized into a long N-terminal alpha-helix followed by a loop region that separates it from a C-terminal anti-parallel beta-sheet.	5.13077e-39
NZ_CP023969.1\|WP_098950881.1\|4254684_4255104_+\|chemotaxis-protein-CheY	gnl\|CDD\|170568	PRK10610, PRK10610, chemotaxis protein CheY.	0.000702472
NZ_CP023969.1\|WP_098950880.1\|4253676_4254513_-\|acid-phosphatase	gnl\|CDD\|319836	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily. Molecular class C acid phosphatases (CAPs) are nonspecific acid phosphatases with generally broad substrate specificity and optimum activity at neutral to acidic pH. Members include Haemophilus influenzae lipoprotein e (P4), Elizabethkingia meningosepticum OlpA, Helicobacter pylori HppA, Enterobacter sp. 4 acid phosphatase PhoI, and Streptococcus pyogenes M1 GAS LppC. Lipoprotein e (P4) exhibits phosphomonoesterase activity with aryl phosphate substrates including nicotinamide mononucleotide (NMN), tyrosine phosphate, phenyl phosphate, p-nitrophenyl phosphate, and 4-methylumbelliferyl phosphate. The role of P4 in NAD+ uptake appears to be the dephosphorylation of NMN to nicotinamide riboside, which is then taken up by the organism. Elizabethkingia meningosepticum OlpA is a broad-spectrum nucleotidase with preference for 5'-nucleotides, it efficiently hydrolyzes nucleotide monophosphates, with a strong preference for 5'-nucleotides and for 3'-AMP; OlpA can also hydrolyze sugar phosphates and beta-glycerol phosphate, although with a lower efficiency. Helicobacter pylori HppA is also a 5' nucleotidase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.0182e-58
NZ_CP023969.1\|WP_169918401.1\|4246511_4248905_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.87687e-58
NZ_CP023969.1\|WP_032896325.1\|4241279_4242272_+\|general-secretion-pathway-protein-GspL	gnl\|CDD\|377469	pfam05137, PilN, Fimbrial assembly protein (PilN).	0.00010626
NZ_CP023969.1\|WP_098950877.1\|4248924_4249896_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	5.55156e-62
NZ_CP023969.1\|WP_098950875.1\|4243351_4245478_+\|type-II-secretion-system-secretin-GspD	gnl\|CDD\|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	4.68331e-123
NZ_CP023969.1\|WP_032896321.1\|4239976_4240585_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|181557	PRK08808, PRK08808, type II secretion system protein J.	4.95211e-29
NZ_CP023969.1\|WP_032896341.1\|4256598_4257675_-\|aldo/keto-reductase	gnl\|CDD\|381317	cd19091, AKR_PsAKR, Polaromonas Sp. aldo-keto reductase and similar proteins. The prototype of this family is an uncharacterized aldo-keto reductase from Polaromonas sp.	1.35159e-160
NZ_CP023969.1\|WP_098950878.1\|4250680_4251604_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270225	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the periplasmic binding component of ABC transporter involved in uptake of mimosine MidA and its similar proteins. This periplasmic binding domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.26659e-68
NZ_CP023969.1\|WP_032896335.1\|4253211_4253634_+\|RidA-family-protein	gnl\|CDD\|100008	cd06151, YjgF_YER057c_UK114_like_3, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.86757e-55
NZ_CP023969.1\|WP_098950872.1\|4239647_4239980_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	5.89699e-05
NZ_CP023969.1\|WP_098950873.1\|4240581_4241283_+\|general-secretion-pathway-protein-GspK	gnl\|CDD\|225698	COG3156, PulK, Type II secretory pathway, component PulK [Intracellular trafficking and secretion].	8.11875e-05
NZ_CP023969.1\|WP_032896326.1\|4242246_4242849_+\|type-II-secretion-system-protein-M	gnl\|CDD\|371216	pfam10741, T2SSM_b, Type II secretion system (T2SS), protein M subtype b. The T2SMb family is conserved in Proteobacteria and Actinobacteria, and differs from the T2SM proteins in Vibrio spp. (pfam04612).	9.10733e-23

>NZ_CP023969.1|WP_098950875.1|4243351_4245478_+|type-II-secretion-system-secretin-GspD
MRTSLFCLATAVSLGGCGSLPDTLDPDDDLLHEALQGTGAQRPPLEAPVAESPPPVTQAPPQRQLIRGNQAFVRQPKAPVNVPEQGGDIVFNFAGQPIEAVINSVMGDLLHENYSIAEGVKGIVSFSTSKPVDKQQALSILETLLSWTDNAMIKQGNRYVILPANQAVAGKLVPQMRVEQPASGLSARLFSLRYISAIEMQKLLKPFARENAFLLVDLARNVLSLAGTPEELANYQDTIDTFDVDWLKGMSVAVFGLQRASVAELMPELQAMFGADSGTPLAGMLRFLPVERTNSVVAISSQPQYLSEVGDWIRTIDEGGGNEPQMYVYDVRNMKAADLAKYLRQIYGNGAIKDDAPAKVAPGLRTTTLSSSTSAGLQANAPVPAAEEPEAEPAENTPASPTSDLEAGTRITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQWYLGRLAGNSTSTTVANASGSQGALGGGGAGLGAADSLFYSFVSSNLQVALHALETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPISQTTVNTGDADTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDAQNPTGSSETPVNPRISTRSVSTQVAVQSGQTVLLGGLIKQDNTESVSAVPYLGKIPGLRWLFGNTGKSKDRTELIVLITPRVITSSSQARQVTDDYRQQMQLLRPAQ
>NZ_CP023969.1|WP_098950874.1|4242845_4243346_+|general-secretion-pathway-protein-GspN
MIGPLRPLEWGWLGLAGLLGLLMAMILSSIGDAPRWLTDAPVHAPPSFQLQAAPTPALQDLAGTWQAPLFSPDRRPDREVGKTQVASLANLTLSGIMITGNLQMAMLKQAGGPTLTVRLGQALPNGWRLEHLTPQYARFALGGRTQTLSLYGKRLPLISHPRESLP
>NZ_CP023969.1|WP_032896326.1|4242246_4242849_+|type-II-secretion-system-protein-M
MRRPLTPRERRGAALLTLALVLGAAYWLLIDSWFAGPLRAMGEQAEQLREQQQRYASVIRQGDALREQLAQAQQDPASSASLLPGDDPDVVAADLMQRLADLINSHANLGGGCNLTQRKPITPEQDDSEPYRQVKVSLTLNCAIEPLTAILHGLEYQPPFLFVDELHIRRDKQAPANGGAGKLAVQLLVRGYLQPARVAP
>NZ_CP023969.1|WP_032896325.1|4241279_4242272_+|general-secretion-pathway-protein-GspL
MIQLEPIARYWRGSLLQQGWRLWLTELRGCVPKWLAFQEPPEQVHHWPLTAAVVPGNARQVLILAPDAVLQQSVQLPLAAARNLMEVVGYELDRYTPFDAEQLYFVARQERRTPSHLEVRVVAILRERLDQILTDCAALGLYPHRVDVAGLGIDLLPAPLRPRSRPAGKQLQRSLPWLCGALLIAAMLLWLNDRQRVLDSMRATVQQQKAEVAQVHALRQQLLNTRGAAQYLSQRKRAQPPLAALLNDLTRCLPADTWLDQLDVKDGEVSFSGQSAKASGLISRIKGCQRLDNAQFEGVIQPDARTGKDQFALRAHLRQEAADAPTPHTP
>NZ_CP023969.1|WP_098950873.1|4240581_4241283_+|general-secretion-pathway-protein-GspK
MKRQRGAALLLVLWVLALLSVLLGGLAGWVQLQSRQALWLRQHTQTLLAAQAGIAQVMAQGQWVADGRSIALTFDDASLQVSVRSERGKLYLVNAALQDVTRLALACGATAAQAQQLAKALETRRQQGLAPFRVLEEVRQLPGMTQALYSQLLPEITLWSDLDRPAPAFASPLMRKALNLPRQDAEGADPGQVVEIDSRAERPGGYQARLRLTLLLSPAEDSAQPYRVVRWQE
>NZ_CP023969.1|WP_032896321.1|4239976_4240585_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKRREQGFTLLEVLVVLSLLSVLLLLVSAALLGANRAVAKAQAYTASLDEMRAAQQFLRTSISEALPLKLTDDDSQAEGFLIGTPERLQFVATLPGVLGGGIQRFTLQRVGQDLQVAFSQRASHANAQRDEPQVLLHNVEALKFSYRGVSPLGQPTDWLSPWPWLRRLPTAVRIDATVDGPVPWVTQVVALRLNLSSASSEE
>NZ_CP023969.1|WP_098950872.1|4239647_4239980_+|type-II-secretion-system-protein
MKHQAGFTLLEMLAALTLMAVCSSVLLVAFGQSARSLSQVTHSDRLTHAALTLLDQEAAGPLIEGTREGELDGIQWQLTSTRQQPHLFRVDLNVREGVHQAHFSTLKARL
>NZ_CP023969.1|WP_056787120.1|4239225_4239651_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MAQRGFTLLEMLVVIVLIGIAAGLLGLGVRQGLQVAKERRVVAQMVEALRATRASAIVSGQAAHTQFDLQGRTFQAPGRASQQWPAQVQVTLHSAEQAGAAVVFYPDGSSTGGNLLLANGSRRWRIDIGWLTGSVQSKALP
>NZ_CP023969.1|WP_032896314.1|4238807_4239218_+|type-II-secretion-system-major-pseudopilin-GspG
MKTRHRQGGFTLLEMLAVIVLLGIVATIVVRQVGGNVDKGKYGAGKAQLASLSMKIDSYALDVGAPPINLQQLLDKPASASNWAGPYAKPSELKDPFGHGFGYRFPGEHGAFDLIFYGQDGQPGGEGYSADLGNWE
>NZ_CP023969.1|WP_098950871.1|4237590_4238787_+|type-II-secretion-system-inner-membrane-protein-GspF
MSLFKFRALDSQGVAQSGTLQAIDQAAAVAVLHQRGWLLLHIETASSPLLRQARGQLKGAALVSFTQQLATLLGAGQPLERALNLLLKQARHPQVRALIERIRDLVKAGKPLSGALEEEGGTFSPLYLSMVRAGEAGGALEGTLRQLSDYLERSQLLRGEVINALIYPAFLVVGVLGSLALLLAYVVPQFVPIFQDLGVPIPLITQVILRLGEFLGAYGLVVLAGLSISAWVLAARLRDPLRRERYDRHLLGIRVIGPLLQRVQAARLARTLGTLLSNGVALLPALVIARQVCSNRALQAQVALAAQRVKGGGTLADAFGRQPLLPELALHMIEVGEQAGELDSMLLKVADIFDVEAKRAIERLLAAMVPTLTVVMAVLVAVIMLAIMLPLMSLTSHI
>NZ_CP023969.1|WP_169918401.1|4246511_4248905_+|TonB-dependent-receptor
MKHILQPTAALTLSLFAAASQAQEDSTLSTVVVTGNRGAEQRTVTSSPVPIDVVSARQLQNTGKPGLMEALSAVIPSLTLPEKNGWDASGIARAPNLRGLSAAEVLVLVNGKRRHTSATLNINGINTGAAPADLDLIPISAIDHVEVLRDGAAAQYGSDAIAGVINVILKADTRGTSVTHAGLGYDGKKQTVQQSLNKGFEIGNGGIVQLALDARSQNDDNKASANGYTYEQAYDLAGKSTYGGYGTPKTNLLTLGYNAELPIDDSLSLYSFTTYSRRKAEQGQNFRLPTITNTITSGPNGYPAGYTPIWYIDEDDFQAAFGGKGTVGEWDWDLSTTYGRNEAEQGTTHNQNPSLGQATPNSFTSGTWISTELTTNLDFKRGFDIGLQKPLDLSYGFEHRRDTYEVQAGDYASYANGGYCVAPGNCASSGAQVTNGISPDEESSASRNSLAGYVDVGFNPLPNWYVGTAVRYEHYNEGVGATRSGKLTTRYDFTPQFAVRATVSNGFRAPSLANSLFSARSTTYGVVDGVYQSINYGVLPVGSAAAQALGAQELKPERSTNFSLGFTLTPTDRLSFTADAYVINLRDRITLTGTLLGPQVTQVLQNNGINSTSGGQYFINGADTRTKGLDLVSSYNQDLGAFGALKWTAAFNWNQTKILNYRASTDILGTSYDLMDRQARNLITGVQPNTKLILGGDWRIERFNLNLALTRYGSYKEVNSSANRDLDRVYNARWITDLDLGYSLTKDLNIAIGAKNLFDLYPKKQGVPSSTMVASYGTYSPYGFTGGYYYTRLTYAF
>NZ_CP023969.1|WP_098950877.1|4248924_4249896_+|amino-acid-ABC-transporter-permease
MPIVAKPYDLLDEVSAQPLRKRRAATPIKALRVVPARHPWRWAGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLGQTLLLTLLSTVFSILLGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSAQYYVERHFARGTARVLPPTPLQRARRWFKEKAHA
>NZ_CP023969.1|WP_047711276.1|4249888_4250662_+|amino-acid-ABC-transporter-ATP-binding-protein
MPEARAGRIQIQGVGKRFGNQQVLDHIDLSIDPGKVTVILGPSGSGKSTLLRTINHLEKIDSGHITIDGEYVGYRRKGDLLFELTEREILKRRIDVGFVFQNFNLFPHLTAWENIAEAPLAHKRWSRVQARDKADELLAKVGLADKADAYPRQLSGGQQQRVAIARALALDPKVLLFDEPTSALDPELVGEVLDVIKGLTQLGVTLVIVTHEIGFAREVADHVVFLCDGQLIEEGPPEQILRQPRHPRTQAFLGKVL
>NZ_CP023969.1|WP_098950878.1|4250680_4251604_+|ABC-transporter-substrate-binding-protein
MFIATARVALLAIAGATAHSAFAVQQVDLSPDRPRIHAPRNEAAIAQIPPGFKFAQPGKFTVAVSGVAGPPLALLASDDKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKSTSTITEIKQAADIAGLKIIVGSGTNQEKVLLGWNEANEKAGLKPALLQYFDDQAAAQLAVQSGRSDALFGPNSVYAYSAAITGGIKRVGTVNGGWPLQADIAVTTRKDNGLVKPIHTALQGAIAGGQYAQVLQRWGLDVERVDQSLINPPGLPD
>NZ_CP023969.1|WP_098950879.1|4251616_4253200_+|FAD-dependent-oxidoreductase
MGLTRREALSSIAAVGGEKAVKDALAVLGLGPSSHRRPQPLKLKDGLGQGTRVLVLGAGMAGLVAALELTRAGFSVQVLEARERVGGRTWTLRNGDRVDYKDGRSQTVGFDPGQYFNAGPARIPSQHRTILDYCSELGVPLEVLVNSSHGAQVRPDLSQAAFSVGQALNDTRGHLSGLLAKAVQRDALDDVLSGEERTRLLAFLQVYGDLSQALAFEGTLRSGHLESAAHPGALPARRSPLTLERLLHPELWGALLHTEFPEFSATMFQPVGGMDRITEAFYRRVQEQVQLGAQVRQIRQLEDGVAVTYHDQRSGRDQVVRGDFLVSTVPLPLLAKLDTDFSAPVKAALLSTRSDQATKVAWQSPRFWETDYRTYGGLSWIEHPARLLWYPSNDLNTRQGVLVAGYVTGEGADVFGAQPLDQQYAASRQAVELLHPGYARHLRHPLAVSWEQIPYSEGPWLQREHFPAQAHALLEQPHGRVYFAGDGLVQSGVGIWQESAANSARHVVAQLAERITQQHQLAALAAS
>NZ_CP023969.1|WP_032896335.1|4253211_4253634_+|RidA-family-protein
MSDSIQRTSVGEFPISQTVTVPASASLVFVSGTLPDPADPKVPGVYGDTEVQSVSVFNKLRQILRQHDLDLGDIVQLRVFLVGAEETDGKLDFAGLQRGYTQFFGTPEQPNKPARTALQVVALPLPGALVEVEAIAARAV
>NZ_CP023969.1|WP_098950880.1|4253676_4254513_-|acid-phosphatase
MRNLFLASLCLLTTALAGCQQHPPANDQLDAVLWTQTSIEHELIYRQLFANATRQLDVALADPSWDALPFAPRNLAGLPPAVVVDIDETLLDNVPLNARDIINNQVYSYDRWNTWVEQAKAQALPGSVAFLQAARQKGIQVYYLTNREHSQVAATAKNLRLRGFPIESDAQILAASTPTGHCESAGYGKQCRRQWVASHARVLLMAGDSLGDFVQAEHNTLDAQRKAVEPYVNWLGQRWFLLPNPSYGNWYSAAYGDDESLPFAHKRRLKQGALLLQE
>NZ_CP023969.1|WP_098950881.1|4254684_4255104_+|chemotaxis-protein-CheY
MSNKALRFLIADGEHLQRVKIEKMLNQLGYYRIAPLSSFDEVQALTRSNGVMFDLLIINTALVRSRQVDLLKFCRENPMIRHALIYDGQCAQRSVVPVSASQTLHLSLSQSPDFNSLCRCLEMLDPAAMACVAGMLTKH
>NZ_CP023969.1|WP_098950882.1|4255107_4256313_-|DUF1835-domain-containing-protein
MSQRPLASTTNGRLNLEQQRKRARELLSHLKNQDPSATLAQAQWQLAKQLGFASWPKLKAHIDALDFAARHQGFEASDEARTRHWRCGNDIAHSLQVAGFKGRFQMLSDPLCMGPVRDLPSAEFRRLRSAFISQAFALAPADVDRRVDDEYTQLDSLAGAEHSVLWCEADAYDQLFLIRALSSLECAPKTLELIEVDRIPGVERFIGIGQLAPDVLAWLWPQRRLIDDAAVHLAKQAWSAYCDPSPIKLAELAKTAHPSLPMLAPALRRQLQELPGVEDGLSLTERLALRYLAESGPVAFARVFAELMAEREPLPFLGNLMFHALMRPLIDGEQPLLVETEIDQPWPKRPLALTPLGYAVINGDAHWMDHASHERWVGGVCLRPRQPHWRMSNDNLPTWGG
>NZ_CP023969.1|WP_032896341.1|4256598_4257675_-|aldo/keto-reductase
MQYRQLGHSGLLVSEIILGTVPFGGRAEFEKCGAVDVPLAKRMFDMAFDAGVNMVDTADLYSHGLAEEVVGKALGDKRNDILLATKGRSPVDDNPNNSGSSRYHLIRACEASLKRLGTDHIDLYQLHNWDGMTPIEETLEALRLLVGSGKIRYFGTSNFTAWQMMKTLGKAELHGMLKPITQQIYYTPESREAEYELLPLALDQQIGTLVWGPMGEGLLTGTTRRGHKPPANTRQGSGWPEPYVHDQERALDIIETLAAVGDEHGVSVARTCLAWLKDRPGITSLIVGARTEAHLRDNLAATELKLTEAQSARIEAVTRRQPLYPYWHRFTAGIDRFDPAEQPFLAEHQKTLDARKDR

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Crispr_ID: NZ_CP023969_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_12

4349330-4349426

Orphan

Consensus_repeat	Method
ATCCAACTGTGGGAGCTGGCTTGC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP023969_12

>merge|NZ_CP023969|12|4349330-4349426|CRISPRCasFinder
ATCCAACTGTGGGAGCTGGCTTGCCTGCGATGGCGGCCTGCCAGCTGACACCTATCTACCTGACACCCCCGCAATCCAACTGTGGGAGCGGGCTTGC

>NZ_CP023969|12|11|4349330-4349426|CRISPRCasFinder
ATCCAACTGTGGGAGCTGGCTTGC	CTGCGATGGCGGCCTGCCAGCTGACACCTATCTACCTGACACCCCCGCA
ATCCAACTGTGGGAGCGGGCTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_032896472.1\|4349803_4350667_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP023969.1\|WP_098950922.1\|4341388_4342282_+\|GNAT-family-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NZ_CP023969.1\|WP_005789444.1\|4346281_4347340_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP023969.1\|WP_138183601.1\|4343456_4343687_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003174875.1\|4350774_4351110_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP023969.1\|WP_098950921.1\|4340178_4341105_-\|amidinotransferase	unknown	unknown	gnl\|CDD\|227211
NZ_CP023969.1\|WP_032896486.1\|4358590_4359118_-\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP023969.1\|WP_098950930.1\|4359183_4360146_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270389
NZ_CP023969.1\|WP_098950928.1\|4355078_4356224_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP023969.1\|WP_044272497.1\|4345015_4346281_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_CP023969.1\|WP_003174877.1\|4348772_4349261_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023969.1\|WP_098950927.1\|4353438_4355082_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP023969.1\|WP_098950923.1\|4343631_4345011_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235660
NZ_CP023969.1\|WP_098950920.1\|4339120_4340167_-\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|236064
NZ_CP023969.1\|WP_098950926.1\|4352406_4353213_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP023969.1\|WP_098950929.1\|4356345_4357206_-\|aldose-1-epimerase	unknown	unknown	gnl\|CDD\|185698
NZ_CP023969.1\|WP_098950925.1\|4351161_4352406_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
NZ_CP023969.1\|WP_098950924.1\|4347341_4348577_-\|3-methyl-2-oxobutanoate-dehydrogenase-(2-methylpropanoyl-transferring)-subunit-alpha	unknown	unknown	gnl\|CDD\|223997
NZ_CP023969.1\|WP_032896484.1\|4357308_4358589_-\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP023969.1\|WP_003192309.1\|4342418_4343438_-\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_032896472.1\|4349803_4350667_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.18912e-66
NZ_CP023969.1\|WP_098950922.1\|4341388_4342282_+\|GNAT-family-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	4.94928e-59
NZ_CP023969.1\|WP_005789444.1\|4346281_4347340_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	0
NZ_CP023969.1\|WP_003174875.1\|4350774_4351110_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	7.58251e-17
NZ_CP023969.1\|WP_098950921.1\|4340178_4341105_-\|amidinotransferase	gnl\|CDD\|227211	COG4874, COG4874, Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown].	4.23574e-106
NZ_CP023969.1\|WP_032896486.1\|4358590_4359118_-\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	3.37714e-26
NZ_CP023969.1\|WP_098950930.1\|4359183_4360146_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270389	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.22634e-143
NZ_CP023969.1\|WP_098950928.1\|4355078_4356224_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.93755e-95
NZ_CP023969.1\|WP_044272497.1\|4345015_4346281_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	2.54239e-175
NZ_CP023969.1\|WP_003174877.1\|4348772_4349261_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	8.46314e-47
NZ_CP023969.1\|WP_098950927.1\|4353438_4355082_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	5.07607e-20
NZ_CP023969.1\|WP_098950923.1\|4343631_4345011_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235660	PRK05976, PRK05976, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP023969.1\|WP_098950920.1\|4339120_4340167_-\|ornithine-cyclodeaminase	gnl\|CDD\|236064	PRK07589, PRK07589, ornithine cyclodeaminase; Validated.	0
NZ_CP023969.1\|WP_098950926.1\|4352406_4353213_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	8.03087e-23
NZ_CP023969.1\|WP_098950929.1\|4356345_4357206_-\|aldose-1-epimerase	gnl\|CDD\|185698	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	1.8431e-110
NZ_CP023969.1\|WP_098950925.1\|4351161_4352406_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	5.27363e-30
NZ_CP023969.1\|WP_098950924.1\|4347341_4348577_-\|3-methyl-2-oxobutanoate-dehydrogenase-(2-methylpropanoyl-transferring)-subunit-alpha	gnl\|CDD\|223997	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion].	8.55095e-140
NZ_CP023969.1\|WP_032896484.1\|4357308_4358589_-\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.3659e-137
NZ_CP023969.1\|WP_003192309.1\|4342418_4343438_-\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	0

>NZ_CP023969.1|WP_003174877.1|4348772_4349261_+|Lrp/AsnC-family-transcriptional-regulator
MRKLDRTDIGILNALQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDADLLGLHVNVFIHVSLEKQNELALQQFEGAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLERFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGISLGS
>NZ_CP023969.1|WP_098950924.1|4347341_4348577_-|3-methyl-2-oxobutanoate-dehydrogenase-(2-methylpropanoyl-transferring)-subunit-alpha
MTQPYAPLRLHVPEPSGRPGCKTDFTYLRLTDAGLVRKPAIDVEPADTADLAKGLIRVLDDQGQALGPWAEGVSTEIMRRGMRAMLKTRIFDNRMVVAQRQKKMSFYMQSLGEEAIGSAQALALNIDDMCFPTYRQQSILMAREVPLVDLICQLLSNERDPLKGRQLPIMYSVKDAGFFTISGNLATQFVQGVGWGMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFIAVYAASAWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGQWSEEEHAAVSAELEAEVVKAQKEAEQYGTLAGGQIPSAATMFEDVYKEMPEHLKRQRQELGV
>NZ_CP023969.1|WP_005789444.1|4346281_4347340_-|alpha-ketoacid-dehydrogenase-subunit-beta
MNDHNNSIELETAMTTTTMTMIQALRSAMDVMLERDDNVVVFGQDVGYFGGVFRCTEGLQTKYGSSRVFDAPISESGIVGVAVGMGAYGLRPVAEIQFADYVYPATDQIISEAARLRYRSAGQFTAPLTMRMPCGGGIYGGQTHSQSIEAVFTQVCGLRTVMPSNPYDAKGLLIASIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPQAQVPDGYYTVPLDVAAIVRPGSAVTVLTYGTTVYVSQVAAEETGIDAEVIDLRSLWPLDLETIVKSVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWAYFPGPSRVGAALKRVMEV
>NZ_CP023969.1|WP_044272497.1|4345015_4346281_-|2-oxo-acid-dehydrogenase-subunit-E2
MGTHVIKMPDIGEGIAEVELSVWHVKVGDLVVEDQVLADVMTDKAMVDIPSPVHGKVISLGGEPGEVMAVGSILISIEVEGAGNTKDVPVVAEPAKVAPPVAEAKPIQAPVESKPAPVVKAPQAPVAREASERPLASPAVRKHALDAGIQLRLVQGTGPAGRILHEDLEAYLRQGPATGASAANPYAERTDEHQIPVIGMRRKIAQRMQDATRRAAHFSYVEEIDVTALDELRVHLNEKHGATRGKLTLLPFIVRAMVVALRDFPQINARYDDEAQVITRLGAVHVGVATQSDVGLMVPVVRHAEARSLWGTAEEISRLATAARTGKASREELSGSSITLTSLGALGGIVSTPVLNLPEVAIVGVNRIVERPMVIKGQIVVRKMMNLSSSFDHRVVDGMDAAQFIQAIRGLLEQPASLFLE
>NZ_CP023969.1|WP_098950923.1|4343631_4345011_-|dihydrolipoyl-dehydrogenase
MTQTLHTTLLIIGGGPGGYVAAIRAGQLGIPTILVEGQALGGTCLNIGCIPSKALIHVAEQFHQTVHHSQGSQLGIEVDVPTLDIRKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAKVIDGKTVEVGEQRIQCEHLLLATGSKSVNLPMLPIGGPIISSTEALAPTHVPKRLIVVGGGYIGLELGIAYRKLGAEVSVVEAQAHILPAYDAELTLPVAESLKKLGVKLYLEHSVTGFTDGKLQVRAPSGDTLALDTDQVLVAVGRKPNTHGWNLEALNLDMNGAAIKIDSRCQTSMRNVYAIGDLSGEPMLAHRAMAQGEMVAELISGKAREFNPAAIPAVCFTDPELVVVGQTPDEAKAAGLDCIVSSFPFAANGRAMTLESKAGFVRVVARRDNHLIVGWQAVGAGVSELSTASGLSLEMGARLEDVAGTIHAHPTLGEAVQEAALRALGHALHL
>NZ_CP023969.1|WP_138183601.1|4343456_4343687_-|hypothetical-protein
MKRCRKRRCGRWATRCTCKNTTPVGASLLAKIANDNAGQQIKRGAFAFFASKLAPTGDANSPVNAVLFAHPEKKPT
>NZ_CP023969.1|WP_003192309.1|4342418_4343438_-|branched-chain-amino-acid-aminotransferase
MGNESINWDKLGFDYIKTDKRFLQVWKNGEWQAGTLTDDNVLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAARMQRSCGRLLMPQVPTDAFIDACKQVVKANERFIPPYGSGGALYLRPFVIGTGDNIGVRTAPEFIFSVFCIPVGAYFKGGLVPHNFQISGYDRAAPQGTGAAKVGGNYAASLMPGSEAKKSGFADAIYLDPMTHSKIEEVGSANFFGITHDNQFITPKSPSVLPGITRLSLIELAQTRLGLEVVEGEVFIDKLDQFKEAGACGTAAVISPIGGIQYNGKLHVFHSETEVGPITQKLYKELTGVQTGDVEAPAGWIVKV
>NZ_CP023969.1|WP_098950922.1|4341388_4342282_+|GNAT-family-acetyltransferase
MSTAVRLAQPSDAEGISQVILAALHSSNAQDYPADVIARVARNFTPDAVLELLKRRVVLVATQAQLIVATAALDGNVVRSVFVNPALQGQGIGRLLMIEIELRAREAGVTVLSVPSSLTAQAFYAKLGFHNVRDVYHGNERTLVMEKALLSRHPIGPYRDREHRAQVIELWQQAFGYDTAHNLPSLAIDKKLAVNDGLFFVATDNKAVIGTILAGYDGHRGWLYSVAVHADYRRHGLGSSLVRYAEQALTALGCMKINLQITGGNDVVVGFYEALGYGVEPRISMGKKIAENIAPRS
>NZ_CP023969.1|WP_098950921.1|4340178_4341105_-|amidinotransferase
MQTTNTVLMIRPARFAFNPDTAVNNRFQRPPLDPLSAQHKALEEFDGYVDTLRQHGVEVLVVQDTPAPHTPDSIFPNNWWSSHADGSLVLYPMEGQNRRLERNKGVLQVLEQRFAINTTIDLSHLEQQNIFLEGTGSMVLDRQHRISYACHSGRTHHAALRQFAERLDYQLCVFHALDRHQAPIYHSNVMMSVGRDLAVVCLQALPDDSERLALERSLRDTGKDILSLDFDQLEAFAGNMLEVHDRDGQPLLVMSASAWGALQPAQRQHVERHTRPVVVNIDNIERIGGGSARCMLAEVHLPARPSFQ
>NZ_CP023969.1|WP_098950920.1|4339120_4340167_-|ornithine-cyclodeaminase
MTRYIDVNDLSYLVSQKGLQTCITEMADYIRADYLRWQDFEKCARLANHSPDGVIELMPVSDASLYAFKYVNGHPKNTLAGMLTVMAFGALGDVDTGKPVLLAEMTLTTAIRTAATSALVARYLARANSRSMALIGNGCQSEFQALAFHAMLGITEIRLFDIDPQATAKLAANLKAFPAIKVILAASVAEAVKGADIVTTVTADKAYATILTDEMIEPGMHLNAVGGDCPGKTELDRRIVERARVIVEYEPQSRIEGEIQHMPEDSPVTELWQVINGQQPGRENDRQITLFDSVGFAIEDYSALRYVLDVAKALDVGSELELVPDLADPKDLFARLAQQPVVQHKKRA
>NZ_CP023969.1|WP_032896472.1|4349803_4350667_-|MBL-fold-metallo-hydrolase
MPALIQAFLDDASSTYTYIVYEADGGPCAIVDSVLNYDPASGRTDTAQADKVIAFVREHGLHVQWLLETHAHADHLSAAPYLRRTLGGKIAIGESISKVQGVFKNLFNLEPEFRVDGSQFDHLFAPDEIFHIGNLKAQALHVPGHTPADMAYLIDGRLILVGDTLFMPDVGTARCDFPGGDARQLYASMRKLLAFPSDTKLYVCHDYPPEGREAKCQTTVAEQRASNIHVHDGVDEAAFVEMRTQRDAGLGMPTLLLPAIQVNVRAGNMPPAEENGVTYLKIPLNQL
>NZ_CP023969.1|WP_003174875.1|4350774_4351110_+|winged-helix-turn-helix-transcriptional-regulator
MESTLSEGEVAQLRASASKACALLKALANEDRLLILCQLTQGERNVGELEALTGVRQPTLSQQLGILRDEGLVATRREGKYIFYGLASHEVIQVMKTLSGLYCGAVIKSWA
>NZ_CP023969.1|WP_098950925.1|4351161_4352406_+|NAD(P)/FAD-dependent-oxidoreductase
MTEQHWGPTISGDIVVIGGGSAGIGLLASLLKRDPHLNITLIEPSDYHCYQPAWTLVGGGAYDLHKTRRPLADVLPNGVSWVQAAVSEVLPDENTLVLDSGQRVTWKNLIVCPGLRLAWEKIEGLQDTLGQHGVTSNYSYEHAAYTWQLVQQLKGGKALFTQPAMPIKCAGAPQKAMYLSCDHWLKQGNLKHIDVEFNLAGAALFGVPTFVPPLMKYVEKYNARLAFNSNLVKVDGPARKAWFEVKDTEGNATVEEKTFDMLHVVPPQVAPDFIRESLLADAAGWCEVNPHSLQHLRYPHVFGLGDVCGTTNAKTAAAVRKQIVVVAENLLALRKQAPLPLKYDGYGSCPLTVEKGKVVLAEFGYGGKLLPTFPLDPTQARRSMWFLKATLLPWFYWNGMLKGREWLTRLSKVG
>NZ_CP023969.1|WP_098950926.1|4352406_4353213_+|sulfite-exporter-TauE/SafE-family-protein
MLLASLLGVLMGLVMGLTGAGGGILGVPALVLGLGLTMTQAAPVSLLAVGAAAAVGAIDGLRHGLVRYRAALLIALLGALFSPLGVFVAHQLSEPVLMGLFSALMVLVAWRMLQREKREAGPSDHGSASWGQKNCMLNQQTGRLAWTAKCSATLAALGAVTGAVSGLLGVGGGFLIVPAFKQLTDVQMRGIVATSLMVVSLLSLIGVAGAFHAGVSIEPVGWAFIGASVVGMLAGRRLCSVIPARALQVGFASLCVVVAVGMLLKASL
>NZ_CP023969.1|WP_098950927.1|4353438_4355082_+|MFS-transporter
MDKYTPHTWQPHERPSLPGSPSTPLHPTRKRWLFAMVGVLVAITGGLGNALVIANLQYLQGALGATTAEMAWLPAAYVMTNVCMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLSSAIAVRAAHGMVGAALSSLGLYYMIQAFPAKWRLKALVLGLGTAQLALPLARLFSEDLLQIAEWRGLYLFELGLALICLGCVFLLKLPPGDRFKTFEKLDFLTFAILASGVALLCAVLSLGRIDWWLEAPWIGVASACSLVLIMAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVVLIRMVLSEQSTGAVGFMQMLNMSYQQMHTLYVVMLAGAIAGLVVSALTINPAHLLMPLIISLALMATGSVMDSFSSNLTRPQNLYISQFLLGFGGTFFLGPTMVLGTKNVLTNPRNLVSFSVMFGICQNLGGLIGAALLGTFQIVREKYHSSMIVEHLTLIDPLVAARVQSGGAAYGKIVADPELRNLMGIRSLATAATREANVMAYNDVFMLIAIIAILTMLWIFTRSLWLMSTTKATPPVQPSGATS
>NZ_CP023969.1|WP_098950928.1|4355078_4356224_+|HlyD-family-secretion-protein
MTEPSTTTTTAIAATPEGSTPPGAVPTQLRPLRVRIISSLGFAAIAIIGVLIVLYAWQLPPFSSAVETTENALVRGQVTIIGPQLSGYVFEVPVQDFQYVKTGDLLVRLDDRIYKQRLDQALAQLAVQKASLANVVQQRNSAEATIKLRQAALVDSQAQARKSTADLRRNEELISDGSVSKRELDVTRAANAQTIAAVAQAQASLEIARQDLQTVIVNRGSLEAAVASAEAAVELARIDLSNTRITAPRDGQLGQIGVRLGAYVNSGAQLMAVVPKQLWVIANMKETQMDNVQVGQPVTFTVDALNHRKFHGTVQHISPATGSEFSLLQADNATGNFVKIAQRVPVRITVDPDQAESERLRPGLSVVVSIDTAGRLKNSPP
>NZ_CP023969.1|WP_098950929.1|4356345_4357206_-|aldose-1-epimerase
MIELTDQFTHLVLAPAIGGSLVNWTVRATGQPLLRHSDTQAINTGLPGKLGCYPLAPWSNRIAQGGFDNPDGWLALAANSLTDPLPIHGSAWQQPWQVISQSEHEVVLELRCETPFAYHARQRVRLNNGELNIDLCVTHLAEQPAWHGLGLHPYLPRRPGTRLQARAGQVWMSDAAKLPTGLASVPENWDFRQLKGLPEGLVDNGFCGWDGHCLIEQPELGYHLECQASGADYFLLYCPPGLDFFCIEPVSHPVNAHHLPGRPGLKLLEQGQSTHLAFNLKYTPNA
>NZ_CP023969.1|WP_032896484.1|4357308_4358589_-|TRAP-transporter-large-permease
MDALILLGSFVALILIGMPVAYALGLSALIGAWWIDIPFQALMIQIAGGVNKFSLMAIPFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGVVPGLMMSACLMVLCLIFAKKRNYPKGEVIPLKQALKIAADALWGLMAMVIILGGILSGIFTATESAAIAVLWAFFVTMFIYRDYKWRELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQIPAKITTLFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILMPVILGIGVDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKTSIEKTVKALLPFYAVLFLVLIAVTYIPALSLWLPHLVL
>NZ_CP023969.1|WP_032896486.1|4358590_4359118_-|TRAP-transporter-small-permease
MKTLLLRFNDRLYMTCIWVAGLSVLGVALIIPWGIFTRYALGTGSSWPEPTAILLMLVFTFIGAAASYRAGAHMSVAMITDRLPPAQRRFVGILSQLLMGTICVFMTIWGAKLCLSTWNQFMSAIPTLRVGITYMPIPIGGVLTLVFVVEKLLFGDQSNRKVVRFDLVEENEGAA
>NZ_CP023969.1|WP_098950930.1|4359183_4360146_-|TRAP-transporter-substrate-binding-protein
MDFKRTLLAAAIFTLSSAAHALEIKFADIHPAGYPTVVAEENMGKALTKASNGELTFKYFPGGVLGSEKEVVEQAQVGAVQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRKVIDGEIGDEILAKITNSEFGLVALAWMDGGTRNLYTKKPVRKIEDLKGMKIRVQGNPIFIEAFNAMGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQNAKYYTLTEHLILPEPIVMSKITWNKLNPAQQDMVKAAAKAAQADERVLWDAKSASSEEKLKKAGVEFITVDKKPFYEATAAVRAKYGAPYADMIKRIDAVQ

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Crispr_ID: NZ_CP023969_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_13

4444468-4444578

Orphan

Consensus_repeat	Method
CAGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_13

>merge|NZ_CP023969|13|4444468-4444578|CRISPRCasFinder
CAGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTGGACTGCGGCGCGTCAGGTAGATAGGCGTCGGCTGGCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACATTTGGA

>NZ_CP023969|13|12|4444468-4444578|CRISPRCasFinder
CAGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTGGA	CTGCGGCGCGTCAGGTAGATAGGCGTCGGCTGG
CAGGCCGTCATCGCAGGCAAGCCAGCTCCCACATTTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098950963.1\|4452514_4456201_+\|translocation/assembly-module-TamB	unknown	unknown	gnl\|CDD\|225463
NZ_CP023969.1\|WP_098952663.1\|4438135_4442128_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|339245
NZ_CP023969.1\|WP_032896591.1\|4450078_4450723_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP023969.1\|WP_032896588.1\|4445793_4447023_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173844
NZ_CP023969.1\|WP_098950959.1\|4435685_4437323_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236236
NZ_CP023969.1\|WP_014718943.1\|4458414_4459614_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|185090
NZ_CP023969.1\|WP_098950957.1\|4429889_4431815_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|227111
NZ_CP023969.1\|WP_032896584.1\|4443592_4443985_-\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133403
NZ_CP023969.1\|WP_032896586.1\|4444706_4445642_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176109
NZ_CP023969.1\|WP_098950956.1\|4429257_4429893_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP023969.1\|WP_044274655.1\|4442676_4443576_-\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|180206
NZ_CP023969.1\|WP_098950961.1\|4447155_4448487_-\|phosphate-ABC-transporter-substrate-binding/OmpA-family-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP023969.1\|WP_098950958.1\|4432751_4434359_-\|methylcrotonoyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|178415
NZ_CP023969.1\|WP_032896576.1\|4431811_4432618_-\|gamma-carboxygeranoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|168168
NZ_CP023969.1\|WP_098950964.1\|4456947_4458399_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP023969.1\|WP_032896609.1\|4456477_4456951_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183170
NZ_CP023969.1\|WP_098950955.1\|4428776_4429070_-\|DUF3077-domain-containing-protein	unknown	unknown	gnl\|CDD\|371447
NZ_CP023969.1\|WP_098950962.1\|4450787_4452515_+\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_CP023969.1\|WP_032896578.1\|4434371_4435535_-\|isovaleryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173845
NZ_CP023969.1\|WP_047711179.1\|4449098_4449911_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|236970

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098950963.1\|4452514_4456201_+\|translocation/assembly-module-TamB	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP023969.1\|WP_098952663.1\|4438135_4442128_+\|hypothetical-protein	gnl\|CDD\|339245	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting. This NEL or novel E3 ligase domain is found at the C-terminus of bacterial virulence factors. Its sequence is different from those of the eukaryotic HECT and RING-finger E3 ligases, and it subverts the host ubiquitination process. At the N-terminus of the family-members there is a series of LRR repeats, and the NEL domain interacts with the most N-terminal repeat. The key residue for the ligation step is the cysteine, eg found at position 386 in UniProtKB:E7K2H2. The LRR section sequesters this active site until invasion has occurred.	1.66498e-27
NZ_CP023969.1\|WP_032896591.1\|4450078_4450723_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.9472e-05
NZ_CP023969.1\|WP_032896588.1\|4445793_4447023_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_CP023969.1\|WP_098950959.1\|4435685_4437323_+\|AMP-binding-protein	gnl\|CDD\|236236	PRK08315, PRK08315, AMP-binding domain protein; Validated.	0
NZ_CP023969.1\|WP_014718943.1\|4458414_4459614_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|185090	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA.	2.70804e-136
NZ_CP023969.1\|WP_098950957.1\|4429889_4431815_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP023969.1\|WP_032896584.1\|4443592_4443985_-\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|133403	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR. Putative helix-turn-helix (HTH) regulatory protein, GnyR, and other related proteins. GnyR belongs to the gnyRDBHAL cluster, which is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	2.36264e-54
NZ_CP023969.1\|WP_032896586.1\|4444706_4445642_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176109	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of dinitrotoluene and similar compounds, such as DntR, NahR, and LinR. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. Also included are related LysR-type regulators clustered together in phylogenetic trees, including NodD, ToxR, LeuO, SyrM, TdcA, and PnbR. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.1499e-69
NZ_CP023969.1\|WP_098950956.1\|4429257_4429893_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	3.12226e-21
NZ_CP023969.1\|WP_044274655.1\|4442676_4443576_-\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|180206	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional.	0
NZ_CP023969.1\|WP_098950961.1\|4447155_4448487_-\|phosphate-ABC-transporter-substrate-binding/OmpA-family-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.1454e-69
NZ_CP023969.1\|WP_098950958.1\|4432751_4434359_-\|methylcrotonoyl-CoA-carboxylase	gnl\|CDD\|178415	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain.	0
NZ_CP023969.1\|WP_032896576.1\|4431811_4432618_-\|gamma-carboxygeranoyl-CoA-hydratase	gnl\|CDD\|168168	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated.	0
NZ_CP023969.1\|WP_098950964.1\|4456947_4458399_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.15434e-110
NZ_CP023969.1\|WP_032896609.1\|4456477_4456951_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|183170	PRK11512, PRK11512, multiple antibiotic resistance transcriptional regulator MarR.	8.22514e-19
NZ_CP023969.1\|WP_098950955.1\|4428776_4429070_-\|DUF3077-domain-containing-protein	gnl\|CDD\|371447	pfam11275, DUF3077, Protein of unknown function (DUF3077). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	0.000372028
NZ_CP023969.1\|WP_098950962.1\|4450787_4452515_+\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	1.36847e-166
NZ_CP023969.1\|WP_032896578.1\|4434371_4435535_-\|isovaleryl-CoA-dehydrogenase	gnl\|CDD\|173845	cd01156, IVD, Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates.	0
NZ_CP023969.1\|WP_047711179.1\|4449098_4449911_-\|exodeoxyribonuclease-III	gnl\|CDD\|236970	PRK11756, PRK11756, exonuclease III; Provisional.	0

>NZ_CP023969.1|WP_032896584.1|4443592_4443985_-|MerR-family-DNA-binding-transcriptional-regulator
MSTTYSISDLARELDITTRAIRFYEEQGLLAPERRGQERIYSGRDKVSLKLILRGKRIGFSLAECRELIELYDPTGGNQIQLNSMLAKIAERREQLEQQLLDIEQMKLELDTAEERCTQALAQTISQAGH
>NZ_CP023969.1|WP_044274655.1|4442676_4443576_-|hydroxymethylglutaryl-CoA-lyase
MSLPSHVRLVEVGPRDGLQNEAQPISVADKVQLVDALSAAGLSYIEVGSFVSPKWVPQMAGSAEVFAQIQRKPGVTYGALAPNLRGFEDALAAGVKEVAVFAAASEAFSQRNINCSISESLERFAPIMASAKQHGVSVRGYVSCVLGCPYEGEIAPEQVAAVARELYAMGCYEVSLGDTIGTGTAGATRRLFEVVGAHVPRDKLAGHFHDTYGQAIANIYASLLEGITVFDSSIAGLGGCPYAKGASGNVATEDVLYLLNGLGIDTGIDLERLIGAGQQISQVLGRPTGSRVAKVRNAG
>NZ_CP023969.1|WP_098952663.1|4438135_4442128_+|hypothetical-protein
MIGATIQQLTFAAEVALERRHIKKEAYQLIQQLVWHQKELLWLGKTVSCSCLNVLGQPLAKIIVIGHLNIYPVHGQFVYKREPCLVFIPGDPVCMLKEYDGLNDFKVDLVERLCQADYRLFFSQFVPHASQSQFFTKLKRHLDPTEQFSELENFDAKKKDIKTFTTGYGLRLSLLWQDYARQNVDLMLDNAQAIAVSTDAAEVRARNAWLLKLGSTALNVLNVAVLVFPELAPVMLLVGAVQMLHEVGSGIEAWEEGDKKAAWAHVSAIVFNAATTYVGAKLLPLVKTAFVESLAHVRCPDGNIRLYSPDLKPYQRQVTLPDGLSANEHGLYEHEDGLYLRENHTYYRVERVGTSNDYKILHPDNAAAYTPKVSRTSAGAWAHEHENPLTLTDSQLMQRLGPTAERFANEPLKLERIVQMSETNMDALRKMHADQSPLPALLADTLKRLEMDSAVAQEPNTVSASQRAAHLSELFAQRYAAAQSAGSEAARLIKRVFPSLPQAVIEELLNAANSAEMKSLTEHNRVPLRLAEEARHYQQHVRLARAYEGLYRKTLGNDDTQRMVLHSLSKLPGWPSDLRIDIVERLPVGERLLDSLGPAHAAVKRRFIKFGSQNLYEVQDDKFAILSSQADIYGAVQSAVSPEDWRAMKLTAHDRGASLKQALEHMSLMPRDELRRLLGMQPVKPRYKPPMRLADGRMGYPLSPVVGAGRRPYACERAAIDLYPSQSIEEVEQMLGLQGVGDIAFLAKMEALNREFTQLKTDLDAWRDAGEQQQRRARGRVANILKDAWQRRSSQQAQASEQEGMKYILRLADEQIGELPPITANMDHVDCLDLSRMYLSDASLPFLNGFGGLRWLDISYSHFTRLPEFANGGAGLTTLNLSGNDIRLTAQSQARLQGMRSLTTLNLSHNRHLGWAADLSNMHDLNRLNLANTGTTTFPRGVEHLNNLAWIDLHTNAMTELPQYALDHPGRISVHDNPISQERFTDDHVTLVEGRRLWLHDSPADMQTSRGDMWDQLSSSPQAEAFFAVVADTTRCAEYISGATRPQLAERVWDMIKAVYENQKTRDVLFKSADGRATCGDGSVLEFMKLETDLLVEQSRERVGEHEVEATFISTGERLFRLRLVDVIAQLDVEARGPDFTEETEVVLAYRTGLAQRLNLPIKTFEMLYRQTAGVSSETLDAAYLKVLEDEKNMSEKSRFFVDMAFWRKQLRTQYTQELNALTATDFELITETREALEEVTELQKSQGRPVDQDAKRVWQRDYDEAIDSVAKLLGKNRDEILTDGSMTDAFYNQQMRQLGAQRQAKETAAMLALTVTVLNNFSAKKVASA
>NZ_CP023969.1|WP_098950959.1|4435685_4437323_+|AMP-binding-protein
MDQPHPSYSRGSQDKTLLAMTIGQAFDHTVAQFPQGEALVVLHQQRRYTWRQLAETVELHARAFLALGMQTGDRLGIWAPNCAEWLICQVASAKLGVILVNINPAYRSSELDYVLKQSGCQWLVCAGSFKSSDYHAMLQALKPELRGLISLDPSPPPEFMSWSQLAALGAGVSPEQLHSRQASLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTAGDRLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLSAVADEKATGLYGVPTMFIALLDHPRRAEFDLSSLRTGIMAGATCPIEVMRRVIHELHMGEVQIAYGMTETSPVSLQTGADDDIERRVTTVGRTQPQLETKIVDEVGNTVARGMIGELCTRGYSVMLGYWNNPEGTREAIDDAGWMHTGDLATMDDQGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQIIGVPDERYGEEIVAWIKFHPGQVANELELLSWCKDRIAHFKTPRHFKFVDEFPMTVTGKIQKFRMREISIKELASTRG
>NZ_CP023969.1|WP_032896578.1|4434371_4435535_-|isovaleryl-CoA-dehydrogenase
MSYPSLNFALGETIDMLRDQVQSFVAKEIAPRAAQIDIDNLFPADLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASVALSYGAHSNLCVNQINRNGNHAQKLKYLPKLISGEHIGALAMSEPNAGSDVVSMKLRADKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKVLMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNASRAYLYAVAQACERGETTRKDAAGVILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
>NZ_CP023969.1|WP_098950958.1|4432751_4434359_-|methylcrotonoyl-CoA-carboxylase
MATLHTQLNPRSAEFAANRAAMLEQVDALHSLLAHVHQGGGAKAQERHTSRGKLLPRERINRLLDPGSPFLELSQLAAHQVYGEDVPAAGVIAGIGRVEGVECMIVANDATVKGGSYYPLTVKKHLRAQTIAEQNRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADEAIMVRQQATIFLAGPPLVKAATGEVVSAEDLGGADVHCKVSGVADHYADSDEHALALARRSVANLNWRKQGELLQRPPVAPLYSSEELYGVIPADAKQPFDVREVIARLVDGSVFDEFKALFGTTLVCGFAHLHGYPIAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACAKVPKFTVIIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGAEQAAGVLVQVKREQAERAGNDFSAEEEAAIKQPILDQYETQGHPYYSSARLWDDGVIDPLQTRDVLALALSAALNAPIEPSRFGVFRM
>NZ_CP023969.1|WP_032896576.1|4431811_4432618_-|gamma-carboxygeranoyl-CoA-hydratase
MSDFNTLELITDRRGFATLWLSREAKNNAFNAQMIRELILALDRVQGDPSLRFLVLRGRGKHFSAGADLAWMQQSAELDYHTNLDDARELAELMYNLSKLKIPTLAVVQGAAYGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPFVVQAIGERAARRYALTAERFGGQRAREIGLLAESYPAESLDQQVDQWVANLLQNSPAAMRASKDLLREVGNGALTPALRRYCENAIARIRVSAEGQEGLRAFLQKRAPSWQDQEPRS
>NZ_CP023969.1|WP_098950957.1|4429889_4431815_-|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MSTLTTILVANRGEIACRVMRTAKAMGLTTVAVHSAIDRDARHSREADIRVDLGGSKATDSYLQIDKLIAAAHASGAQAIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSKSAAKALMETAGVPLVPGYHGEAQDLETFRAACERIGYPVLLKATAGGGGKGMKVVEDVSQLAEALASAQREALSSFGNGQMLVEKYLLKPRHVEIQVFADQHGHCLYLNERDCSIQRRHQKVVEEAPAPGLSVEQRKAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVAQGEALPITQEQVALNGHAIEVRLYAEDPANDFLPATGHLALYRECRPGAGRRVDSGVEQGDSVSPFYDPMLGKLIAWGEDREQARLRLLSMLDEFAVGGLKTNLGFLRRIIGHPGFAAAELDTGFIPRYQDELLPTPGALSDEFWQAAGAAFMQSLPVGDGPWANNQGFRAGLPAEVSLHLSCNGQDRLVTLAGHSAQLCGEQLLTEHQGVRRAHLAVRNEGSLYLRWDGEMHAVSLFDPIAAVEANQSHQGGLTAPMNGSIVRVLVEVGQTVEAGTQLVVLEAMKMEHSIRAPHAGVVKALFCQEGEMVAEGSALVELETAG
>NZ_CP023969.1|WP_098950956.1|4429257_4429893_+|helix-turn-helix-domain-containing-protein
MDNWIALVKANMKDRKVTQDELAQRLGMSQGGIGHWLNKRRVPSLADMNRVLAELGLGYLEVALEIRERATQAPELQAHYNPYFRYPVSDWKQACELREERAPYRTERYELTDYHAQGEAFWLPVTGDAMTAPTGMSIAAGMMILVDPAIPPEPGKLVVAQWAGSPHATFRQLQEESGQHYLVPLNPTYPKVLLTEGCRLLGVVVQATAKF
>NZ_CP023969.1|WP_098950955.1|4428776_4429070_-|DUF3077-domain-containing-protein
MCTSSAAQRALDYYLKENRSTPASDGAMFAIKPEVSQEEALIHASDLLRSAAATAYESACSHQGNQRDLAFSVVYLIDMAKAMVERSLQAPGAAANA
>NZ_CP023969.1|WP_032896586.1|4444706_4445642_-|LysR-family-transcriptional-regulator
MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVPTPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRLAPTVVIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHPMAGKDKFTLDDYLSLTHIHISSRRNGLGYVDLALGKMGIQRKIALRSQHYLMASQVLQQTDMVMTVPERFARRHELHWFHLPVNNVPPVETHLYWHESTDQDPANRWMREQMIELCQQVTAQEKKLDKQQA
>NZ_CP023969.1|WP_032896588.1|4445793_4447023_+|acyl-CoA-dehydrogenase
MDFAYSPKVQELRERVTAFMDAYVYPAEPVFERQVSEGDRWQPTAIMEELKAKAKAEGLWNLFLPESELGAGLSNLEYAPLAEIMGRSLLGPEPFNCSAPDTGNMEVLVRYANEEQKQRWLEPLLRGEIRSAFAMTEPDVASSDATNMAARAERQGDEWVINGKKWWTSGACDPRCKILIFMGLSNPDAPRHQQHSMILVPVDTPGVKILRPLPVFGYDDAPHGHAEVLFDNVRVPYENVLLGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCKRSVSRTAFGKPLARLGGNIDKIADSRMEIDMARLLTLKAAYMMDTVGNKVAKSEIAQIKVVAPNVALKVIDRAIQMHGGAGVSNDFPLAYMYAMQRTLRLADGPDEVHRAAIGKFEIGKYVPRELMRGGQ
>NZ_CP023969.1|WP_098950961.1|4447155_4448487_-|phosphate-ABC-transporter-substrate-binding/OmpA-family-protein
MMLRVLFLYFAIALPAVATPLPIPDQGPALRIQGSNTIGAALGPALVKGLMEHQGLQDVHAEAGAGANEQRVVGKTPQGQTVTIEVAAHGSSTGFTALKNNRADLAAASRPIKDSELMDLAPLGDLKSPGAEHVIAIDGLAIIVNPRNPLSTLNTEQLAQIFNGEVSTWEALGGTGGAIHLYARDDQSGTFDTFRELVLSRRGQPLAPSAKRFESSEQLSDAVSQDPQGIGFIGLPSVRQAKAMAIADGDSQPMLPLTSLIATEDYPLSRRLFFYLPPSSPNPWAKALVDFTQGSQGQAMVAANGFIAQQVQAIGVAPRPSMPDDYQAIARDAQRLTVNFRFDEGSASLDNKARQDVQRVVAYIRSHGKLDKQVTLVGFGDTKNDPQRAALLSKLRAMAVRRELAKSGVVLKDIRGFGAQMPVAANTADEGRIKNRRVEVWVY
>NZ_CP023969.1|WP_047711179.1|4449098_4449911_-|exodeoxyribonuclease-III
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQKGHYGVALLSRKEALSVHKGFASDEEDAQRRFIWGTFADENGQPVTIMNGYFPQGESRDHPTKFPAKQRFYADLQHLLETQFSNDQALVVMGDVNISPQDCDIGIGADNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDVIMASTGLVPRVKDAGVDYDLRGLEKPSDHAPIWLELS
>NZ_CP023969.1|WP_032896591.1|4450078_4450723_+|GNAT-family-N-acetyltransferase
MPETSTAEIRLLNSGYSREARSLLYQAYRHEPTFAYIFEAERSGYEQRVRATVRELVKQHFFQKLPAIGLFVNDRLIGIALIAPPQRRLGITESWAWQIRMWLSTGVRGTRRYLEYHHAVMACLPTESVHVLPLLGIHPQFQGKHHGEQLLEAVHNWCADDPHSSGVVLDTGNSRYLDFYKRQGYEEIGEVAVGPVREHVFFHPNPQALHPATA
>NZ_CP023969.1|WP_098950962.1|4450787_4452515_+|outer-membrane-protein-assembly-factor
MKFPGRFTSGLILLFTSCGALAQSELDVRIKPSNDALKANIEGYIGGVGDRDEEALLRFSRGAEEQARKAAQALGYYQPQIASDVKGGKNPRLTLTIDPGEPVHLRNVTLRVDGPAASLKAFRVPASDDLKPGAVLNHGHYEDAKRLIQNQASRYGFFSGRFTSQKLAVDPQAGVADIELIYDSGPRYSMGKVSFTGDTPFDEELLQRMVPFKPGTPYDSELVAELNQNLQASGFFEGVRVDASPTAATDDVIPVAVQLDTRKPRTMGLGLGYSTDVGPRGKANWTRHWVNPQGHSYGWEAELSAPRQNVGLWYDIPLDPPLTDKLRFAGGYQNEEIANTDTLSKLLTIGPEWHSKLPSGWTRVISLKYQREEYRLGNDSGLSNLLMPGVSYSYLRSDNRIDPHHGYRLMFDTKVAKEGAGSDTNLLYGTATIKGLTTLWDNHRFLGRAQFGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTLSPENDRGDRIGGRYMVALSAEYQYSITDKWRIATFIDQGNSFNNLDLPSLKTGVGVGVRWVSPVGPIRLDLAHALEDPGGVRLHFSMGPEL
>NZ_CP023969.1|WP_098950963.1|4452514_4456201_+|translocation/assembly-module-TamB
MRGLKIAGLALVAILALLLVALWSVLGTQAGSRWALGQVPGLSVENFQGRLGGQWSADHLLWQQDGSRVELNAPIFDWSPGCLLRMTLCINRLDVEQVSLEFAPSAEESDSGPIQLPDLKLPVALQLGDVRIGSLLFNGSEELKGLQLAAHWTAAGLQIDSVHLQRDDLVLDLAGLLQPTGDWPLNATGNLSLPYAPGGAPWTVALKIEGDLLKTLKLDADSSGYLPAKLTGELQPLVEHLPAQLHITSESFKPSADLPDTLQLNQLDLSAKGDLNSGYQLLGKAVLPAEKGPVDLLLKGKVDAKGAQIAGLDLTAGDKQSLKLSANLDWQQGFSADAKIDWLDFPWHRLYPVIDEPQVALRTFNGEVSYKDGNYLGNLKADLDGPAGKFNVVTPFSGDLKQVFLPELKLSAGQGKAEGHLNLQFADGIAWDTALDLSALNPAYWVAELPGTLAGPLRSKGEFKNEQLKLNADLDLKGRLRGQTAVLAAKAEGAGEQWTLANLDIRLGDNRINGSGSLQQRLAGQIDIKLARLAQLWPQLRGQVNGRVEVAGTLKAPQGKLDLKGQQLAFADNRLQSLNLDANLDSAQRAKLDLKANGIQSGETQVGNLTASAQGDIKNQKVQLALTGPLVKLALALDGNLDKGNWRGRLASGDVQAGGQDWRLQAPAKIERLADGKLTFGAHCWVSGGASLCGEDQRLMPEPKLRYHLKQFPLDSLAAFLPKDFAWQGRLNADVQLDLPQSGPKGVVAVDASGGTLRVRDKGQWLDFPYDTLKLETTLNPKRIDTQLNFRGGKLGELLLQAQINPLPNNKPITGTFSLAGLDLSVARPFVPMVEKLTGKLNGNGRISGGLLAPLVNGNLNLVGGEVSGPELPISLEGLNLQAQIAGESVQLNGGWHSGKAGQGSLTGQIDWGRALVVDLSLKGSQLPVTVEPYAKLEVAPDLKISLKDDKLAIAGKVHIPRGDITVRELPPSTVKVSDDTVIIGSQTEEGKPPMAMAMDIDVEVGEDQLNFAGFGLTAKVQGHVHIGDNMDTRGELWLNDGRYRAYGQRLNVRRARLLFAGPLDQPFLDIEAVRVVVEPSRTVTAGIRLSGSAEQPTTQIFSEPTMAQEDALSYLVLGRSRTNTGEDNNMLAEAALGLGLMGSAGVTTDIANKLGIQDFDLDTQGTGNSTAVVASGKINEKLSLRYGVGVFEPANTIALRYLLSKKVYLEVATGVASSLDIFYKRDF
>NZ_CP023969.1|WP_032896609.1|4456477_4456951_+|MarR-family-transcriptional-regulator
MPHFTPDNFHNCHLGLLLGRAAILKDRIIDTHMEPHGITAAQFKVLIIMAQFGVDTPAELCRNLSLDSGSMTRMLDRLEQKDLLSRKRSELDRRQVQLVLTAEGQRLADMLPNIGAKALNQLAGVLEPGELETLERILKKMLIAAGDPITIQRVGRS
>NZ_CP023969.1|WP_098950964.1|4456947_4458399_+|efflux-transporter-outer-membrane-subunit
MNTRALSLVLAAMTLAGCANYSGLDTQGHRLDANTLHTGKSLSGVTLSSAAWPAADWWKSLGDPQLDGLIQEALQNSPDMQVADARAHQAEAAAYAANAARMPTLDASAGVSRSRLAKDQDPRGQGDAYSTVRNIGASFNYNFDLWGGQRAAWEAALGEARAAEVDQQAARLTLAANVAKAYSDLGQAHIVRDLAVDDLKRTRQMLDLSKRRLSSGIDSEYQYQQTESLEASSQSQLIDAEKQLQSAKIALAVLLGKGPDRGDELARPAVLKPSAVAVPAVLPAELLGRRPDLVAARWRVEAASKNIDASKTRFYPNLNLSASAGAESLLGDAMYGSASRFFNIAPTISLPIFDGGRLRADLDARDADYDLAVAQYNKTLVQALGDIGNSLSQLRDTGRQIQAQQHAADIAQQSYDTGMQRYSSGIGNYLDVLSIEQQLLQAQRQLATLNAAQIDLSIQLMQALGGGYHANSVAATTPATRTE
>NZ_CP023969.1|WP_014718943.1|4458414_4459614_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MATAESTNATEQPKDTNPRKRKVMLIGLALIVILSVVGVWAWYEFYGRFNESTDDAYVNGNVVEITPLVTGTVVSIGADDGDLVHEGQVLINFDPNDAAVGLQSAQANLARTVRQVRGLYSNVDGMKAQVNAQKADVQTAQDNYNRRKTLAQGGAISQEELSHARDSLTAAKNALTNLEQQLKTTNALVDDTVISSHPDVQAAAAQLRQAYLTNARSTLIAPVTGYVAKRTVQLGQRVQPGTALMAVIPLDQLWIDANFKETQLRDMRIGQPVDIESDIYGSDVKYSGTVDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHINAEELAKHPLRVGLSTVVNVDLHDQSGPVLAQQAPQKASFTTNVYDRQLAEADAMINQLIHDNSVAAPKAAQR

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Crispr_ID: NZ_CP023969_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_14

4593570-4593664

Orphan

Consensus_repeat	Method
TGTGGGAGCTGGCTTGCCTGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_14

>merge|NZ_CP023969|14|4593570-4593664|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGATGGCGGCCTGACAGCCGGTGCCAATCTACCTGACACCCAGCAATCAAACTGTGGGAGCTGGCTTGCCTGCGA

>NZ_CP023969|14|13|4593570-4593664|CRISPRCasFinder
TGTGGGAGCTGGCTTGCCTGCGA	TGGCGGCCTGACAGCCGGTGCCAATCTACCTGACACCCAGCAATCAAAC
TGTGGGAGCTGGCTTGCCTGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098951056.1\|4588633_4590013_+\|iron-containing-redox-enzyme-family-protein	unknown	unknown	gnl\|CDD\|379634
NZ_CP023969.1\|WP_078467624.1\|4597125_4598316_+\|sugar-transporter	unknown	unknown	gnl\|CDD\|179591
NZ_CP023969.1\|WP_098951063.1\|4595564_4596563_+\|bile-acid:sodium-symporter	unknown	unknown	gnl\|CDD\|372642
NZ_CP023969.1\|WP_098951058.1\|4590024_4590969_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225443
NZ_CP023969.1\|WP_003232361.1\|4584816_4585617_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP023969.1\|WP_003191984.1\|4603145_4604465_+\|Nramp-family-divalent-metal-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP023969.1\|WP_014718862.1\|4585628_4585901_+\|DUF2160-domain-containing-protein	unknown	unknown	gnl\|CDD\|378313
NZ_CP023969.1\|WP_032896739.1\|4596650_4597013_+\|type-1-fimbrial-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098952669.1\|4590975_4592094_+\|carboxylate-amine-ligase	unknown	unknown	gnl\|CDD\|237406
NZ_CP023969.1\|WP_003192009.1\|4586063_4587806_+\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP023969.1\|WP_044273978.1\|4588149_4588425_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP023969.1\|WP_032896748.1\|4604477_4604735_-\|antitoxin	unknown	unknown	gnl\|CDD\|226603
NZ_CP023969.1\|WP_032896737.1\|4594690_4595479_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP023969.1\|WP_044273976.1\|4587955_4588150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951066.1\|4598956_4600156_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP023969.1\|WP_098951068.1\|4600267_4601263_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP023969.1\|WP_098951060.1\|4592177_4593422_+\|glutathione-dependent-formaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|176243
NZ_CP023969.1\|WP_098951070.1\|4601549_4603103_+\|DUF726-domain-containing-protein	unknown	unknown	gnl\|CDD\|182323
NZ_CP023969.1\|WP_005789024.1\|4583939_4584806_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP023969.1\|WP_032896736.1\|4594164_4594596_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951056.1\|4588633_4590013_+\|iron-containing-redox-enzyme-family-protein	gnl\|CDD\|379634	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme. The CADD, Chlamydia protein associating with death domains, crystal structure reveals a dimer of seven-helical bundles. Each bundle contains a di-iron centre adjacent to an internal cavity that forms an active site similar to that of methane mono-oxygenase hydrolase.	1.27924e-17
NZ_CP023969.1\|WP_078467624.1\|4597125_4598316_+\|sugar-transporter	gnl\|CDD\|179591	PRK03545, PRK03545, putative arabinose transporter; Provisional.	0
NZ_CP023969.1\|WP_098951063.1\|4595564_4596563_+\|bile-acid:sodium-symporter	gnl\|CDD\|372642	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137). These family members are 7TM putative membrane transporter proteins. The family is similar to the SBF family of bile-acid symporters, pfam01758.	2.04097e-117
NZ_CP023969.1\|WP_098951058.1\|4590024_4590969_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225443	COG2890, HemK, Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis].	2.10523e-24
NZ_CP023969.1\|WP_003232361.1\|4584816_4585617_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.73185e-68
NZ_CP023969.1\|WP_014718862.1\|4585628_4585901_+\|DUF2160-domain-containing-protein	gnl\|CDD\|378313	pfam09928, DUF2160, Predicted small integral membrane protein (DUF2160). The members of this family of hypothetical prokaryotic proteins have no known function. It is thought that they are transmembrane proteins, but their function has not been inferred yet.	1.25774e-39
NZ_CP023969.1\|WP_098952669.1\|4590975_4592094_+\|carboxylate-amine-ligase	gnl\|CDD\|237406	PRK13515, PRK13515, carboxylate-amine ligase; Provisional.	2.49821e-137
NZ_CP023969.1\|WP_003192009.1\|4586063_4587806_+\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	5.52859e-29
NZ_CP023969.1\|WP_044273978.1\|4588149_4588425_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	6.22537e-17
NZ_CP023969.1\|WP_032896748.1\|4604477_4604735_-\|antitoxin	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	2.96829e-06
NZ_CP023969.1\|WP_032896737.1\|4594690_4595479_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.74205e-34
NZ_CP023969.1\|WP_098951060.1\|4592177_4593422_+\|glutathione-dependent-formaldehyde-dehydrogenase	gnl\|CDD\|176243	cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_CP023969.1\|WP_098951066.1\|4598956_4600156_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	5.37233e-98
NZ_CP023969.1\|WP_098951068.1\|4600267_4601263_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.59477e-79
NZ_CP023969.1\|WP_098951070.1\|4601549_4603103_+\|DUF726-domain-containing-protein	gnl\|CDD\|182323	PRK10236, PRK10236, acidic protein MsyB.	1.95911e-15
NZ_CP023969.1\|WP_005789024.1\|4583939_4584806_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.99289e-64
NZ_CP023969.1\|WP_003191984.1\|4603145_4604465_+\|Nramp-family-divalent-metal-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0

>NZ_CP023969.1|WP_098951060.1|4592177_4593422_+|glutathione-dependent-formaldehyde-dehydrogenase
MRAMTYQGAHKVQVDTVPDPIIEQPDDIILRVTATAICGSDLHLYRGKIPTVEHGDIFGHEFMGIVEETGPAVTAVQAGDRVVIPFVIACGDCFFCQLQQFAACETTNDGRGAILNKKAIPPGAALFGYSRLYGGIPGGQAEWVRVPKANTGPFKVPGTLADEKVLFLSDILPTAWQAVTNAGIGKGSSVAIYGAGPVGLLSAACAQMLGAEQIFMVDDHPYRLAYAQKMYGVIPINFEEDEDPADTIIRQTAGMRGVDGVVDAVGFEAKGSTTETLLTALKIEGSSGKALRQCIAAVRRGGVVSVAGVYAGFIHGFMFGDAFDKGLTFKMGQTHVQRFLPELLEHIELGHLHPEAIITHRLPLEQAARGYELFDKAEEECRKVILLPGGNERPLTEPLDELTPELRVQGVPGF
>NZ_CP023969.1|WP_098952669.1|4590975_4592094_+|carboxylate-amine-ligase
MLTFGIEEEYFITDLHSRQMVGEPSAAVLAACREAIGAGFSFEMFQGQIEAASPVFTSSAEAADYFSTGRGNLAQSLAEFGLGVVCAGSHPLADWRGQRPTDQAHFRQLFDDIQYVARRSVLCGLHVHVQVPQALDRIAVMNQVSPWLPLLLLLSCSSPFWDGAPSGFMSYRQAACDEWPRMGVPEHFSDWAEYLRYLALLQRIGAIKADGNGWWGIRPAARYPTLELRMTDACPRLSDALALATLFRVMVTHACAMQRPGARFSTEARWLLKENRWQAKRYGAAGTFALDDTGTLGSAEQWLQYARQTFAATAEAMGEPLLFDTLDALLQRGNSATEQLRWHAQAQASGADALASVRQVVDLLLAQTRGDH
>NZ_CP023969.1|WP_098951058.1|4590024_4590969_+|class-I-SAM-dependent-methyltransferase
MSAQQLADRALLNLGRGLKEGGYRFITPTPLTHERVYRRLATPLAMTLRDVFGWSMPFDQGLLPEALREELQQAGVIEKHGALWRSTVRWSSLDGLLFAHSPYPTDQADAVFFGPDSYRFAQVIEGYLQQRFEPLKRAVDIGCGAGVGALVIAKARHDAQVLAVDINPRALRMTAVNAELAGLNNLSVYHSDVLASVEGEFDLIVANPPYMKDDRQRAYRHGGGALGEQLSLRIVSESIGRLALGGSLLLYTGVAMVAGSDPFLEAVKPLLGSDAYGWTYRELDPDVFGEELEKPGYEQVERIAVVALTVTRLR
>NZ_CP023969.1|WP_098951056.1|4588633_4590013_+|iron-containing-redox-enzyme-family-protein
MTLLTALSGQPASLTDSAQGRHQRVYQQLHGETQDAAELAREYLHDQLALVEATDCDLPEAPEQLLAWVEQRCAEVAQAYADYLEQRRNGGPRRYFQNKAHALYFLQCVAPTKQVDGAWLYGLLRYWQDQRFDGLLTTYLEELGDGEAAQNHVVIYRKLLSEHDADSEAGLEDDHYLQGALQLALGVCADEFLPEVIGFNLGYEQLPLHLLISAYELSELGIDPYYFTLHVTIDNASSGHACKAAQSVLNLLPLGEGRADFYRRVAAGYRLNDLGLGTTSVIKQFNLQDQVVAMLERKRAFGQHMHSDYCRFEGQTVNQWLARPGQIGAFLKALEDKGWIQHNQDPANSRFWQLIEGAGAAMFGVFSGYEKQLIHDWIAGEWVASERVAPVRPGRGSRFSREQHRPADPDTQALAESLCNLPDVQQLNALIPWLSARRHCTPAGLYATRRFIQLRARLR
>NZ_CP023969.1|WP_044273978.1|4588149_4588425_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MLSVVWLDEAISDLIDIVTFIAAENPGAARRIKTRLEGAPLPLTEHPYLYPNGRVPGTREVVVHPNYVLVYRVTAERIEIVNVLHARQEYP
>NZ_CP023969.1|WP_044273976.1|4587955_4588150_+|hypothetical-protein
MGVPLSPIVSEFETEEQASSHDLWFRAKVEKSLANPGPGVPHDEVMARVEAIILEAERKQRVKA
>NZ_CP023969.1|WP_003192009.1|4586063_4587806_+|carbohydrate-ABC-transporter-substrate-binding-protein
MLNKNNKLRHSISLAAVLALSGLSASAWADAYEDAAKKWIGSEFKPSTLTEAQQLEELKWFIKASEPFRGMKINVVSETLTTHEYESKVLAKAFSEITGIKLTHDLLQEGDVVEKLQTQMQSDKNIYDGWVNDSDLIGTHFRYGKTESITDLMANEGKDFTSPTLDLKDFIGLSFTTAPDGKIYQLPDQQFANLYWFRADWFERPELKAKFKEKYGYDLGVPVNWSAYEDIAKFFSEDVKEIDGKRIYGHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSVTRGGDTNGPAAVFATQKYVDWMKAYAPPEAAGMTFSESGPVPSQGNIAQQIFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPVGPYWEKGMKKGYQDVGSWTFLKSTPEKQKLAAWLYAQFVTSKTVSLKKTIVGLTPIRESDINSQAMTDMAPKLGGLVEFYRSPARTEWSPTGTNVPDYPRLAQLWWSNIAAAASGEKTPQQALDNLAKEQDAIMTRLERSKVQPVCGPKMNPERDAQYWFDQPGAPKPKLANEKPKGETVNYNDLLKQWEAARK
>NZ_CP023969.1|WP_014718862.1|4585628_4585901_+|DUF2160-domain-containing-protein
MEWMAWTTPTALFFGGIALILAGMTTWELRSPSIPRRGLLPISTTRGDRLFIGLLGSAYLHLLVIGVTDWSIWVASALSLVWLLSVMRWG
>NZ_CP023969.1|WP_003232361.1|4584816_4585617_+|carbohydrate-ABC-transporter-permease
MSKRKLIPLLIYILFLLVPIYWLLNMSFKSNTEILGGLTLFPQDFTLANYKVIFTDPSWYTGYLNSLYYVSLNTVISLSVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFLLPFFQLYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFVKIFIPLIGSGIGVTAFFCFMFSWVELLLARTLTSVNAKPIAAVMTRTVSASGIDWGVLAAAGVLTILPGMLVIWFVRNHVAKGFALGRV
>NZ_CP023969.1|WP_005789024.1|4583939_4584806_+|sugar-ABC-transporter-permease
MNKVQNNKAWWLVLPVFLLVAFSAVIPMMTVVNYSVQDIFDQSSRYFVGADWYKQVLLDPRLHDSLLRQFIYSACVLLIEIPLGIAIALTMPTKGRWSSLVLIILAIPLLIPWNVVGTIWQIFGRADIGLLGSTLNAMGISYNYAANTMDAWVTVLVMDVWHWTSLVALLCYSGLRAIPDVYYQAARIDRASAWAVFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNATTFLSQTLTQMAVGQFDLGPAAAFSLVYFLIILLVSWLFYTAMTHSDANR
>NZ_CP023969.1|WP_032896736.1|4594164_4594596_-|hypothetical-protein
MNTDEKMTGDLFEVDKRLSLKPVVDFNAYLRSAFGDGPCTCVRCTASGGDESGYEFQHTFTFEGKPVHRRFASTAGSDVLMALKKAWLSYTKAELPLSGVLALDTVKEFVEPQLHKRLAPLFVASGLVKDVDGELRIQPQAMA
>NZ_CP023969.1|WP_032896737.1|4594690_4595479_-|helix-turn-helix-transcriptional-regulator
MPPKGHEKAVRRSVPGLSSLPRPVYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTSVGRFVAPPQRAVWIPAGMPHRVFSSPHTEMRSLYLDCSVTAWAAERCQVLEVSSLLRELIRNFSQLPVEYTEDGPDGRLAQVLLDQLAAAPQVDLMLPLPHDPRLRQIYRSLNLHPEQQTTLGEWSRKLGVSEKTLSRVFLSDTGLTFRAWRQRLRLLSALPALEQGERVTDVALGCGYESTSAFINAFRQQFDSTPGEFFR
>NZ_CP023969.1|WP_098951063.1|4595564_4596563_+|bile-acid:sodium-symporter
MTRPRFLPDNFTLTLIATVILASLLPASGQTAVAFGWVTNLAIALLFFLHGAKLSRKAIVAGAGHWRLHLLVFSLTFVLFPLLGLALKPLLSPLIGNELYMGMLYLCALPATVQSAIAFTSLARGNIPAAICSAAASSLFGIFLTPLLVALLLNVHGDGGSTVDAIVKISVQLLLPFIAGQIASRWIGGWVGRNKAWLKFVDQGSILLVVYGAFSEAVNEGIWHQIPLWELGGLVVACCVLLALVLVASTVLGKAFGFNQEDRITILFCGSKKSLATGVPMAQVLFAGASMGVLILPLMLFHQIQLMVCAALAQRYAQRPESIPELMGQVDP
>NZ_CP023969.1|WP_032896739.1|4596650_4597013_+|type-1-fimbrial-protein
MNVHRVAVMTGLLGLWASTCGAAQTVGQGTIRFSGAIVESGCATNARSGSVMELRGCAQSTRGSRIEVRSVAPVVSVDAPHVRLVADSGEGRYYDQRYVLVDRAGKLIQSGNYIITMTSP
>NZ_CP023969.1|WP_078467624.1|4597125_4598316_+|sugar-transporter
MSLSAATPQANWQPVIALALAAFVFNTTEFVPVGLLSAIGASFDMPVASVGLMLTIYAWIVSLTSLPVMLLTRNVERRKLLIVLFGLFIASHILSSVATSFGLLMVSRVGIALAHALFWSITASLAVRLAPEGKQVQALGLLATGTSLAMVLGIPLGRLLGEAMGWRTTFLVIAAFAAALVFWLARTLPLLPSQNSGSLRSLPLLFKRPALVALYVLTAMTVTAQFTAYSYIEPFVEGVAGLGGSAVTLILLVFGGAGIIGSLLFSLVHRFNPHLFVIGAVSILAACLALMLPLSGAESYLVGLSIFWGMAIMGFGLAMQSKVLVLAPDATDVAMAMFSGIYNIGIGGGALMGSWVGSHFGFAWIGAAGGLLAGLALVGYCLAIRRFGQGGAPTPS
>NZ_CP023969.1|WP_098951066.1|4598956_4600156_-|NAD(P)/FAD-dependent-oxidoreductase
MKQHILIIGAGFGGVWSALSAARLLDKHDRNDVRISLLAPQAELRIRPRFYEPDVHTMLAPLDALFDAVGVTFVQGTADSIDATNKQVTYRNAAGIPATLAYDRLVVAAGSRLNRPGMDGIEHVFDVDQIEDAARLEAHIKALKNLPDSPARNTVVVAGGGFTGIETATEMPTRLREALGETANIRVIVVDRGPQIAASMGDGIRPSIIEASQALGLEWILNTSVASVDAGGVTLADGQRIESSTVIWTIGFRANPLTEQVSATRDPQGRLHVDANLKVKGQAAIFAAGDVAYAATDELGNFAAMSCQHAIALGRYAGNNVAADLIGVAPMAYSQPKYVTCLDLGAWGAVYTEGWDRQLKLVGQEAKDLKQQINSVWIYPPAADRKVALAAADPLIPVA
>NZ_CP023969.1|WP_098951068.1|4600267_4601263_-|helix-turn-helix-domain-containing-protein
MTALSPLGQPRTLVFLTYPHMGLLDLTGAQTVFWAATKAMAERGLQGYVLHNASLAGGLMPTAEGLSVDTVALAQFDPAAIDTLVVPGAPAIEQAMLENTALVDWLRNASGQARRTASVCSGTFLLALAGLLERRRAATHWAMCELLKQRFPSIEVDVDAIFVQQGQVWTSAGVSAGIDLALALVEADCGREVALQVARELVVFLKRPGGQAQFSQVLQAQTADSASFDALHAWISDNLRDSDLSVERLAAQSHMSPRNFARVYKQKTGRTPAKAIELFRMEAARRMLEDSQRSIDQIAGLCGFGDEERMRCTFHRHLAISPRDYRERFSR
>NZ_CP023969.1|WP_098951070.1|4601549_4603103_+|DUF726-domain-containing-protein
MQHQWDEMHRTRKPTFVLCGEPQGDVLNLYVHGYSAFFNRQQLGNFKQQLAAIEGSTNLMLFWPAGHFLENLFAPFKDVLASLLGGGGLGAATVGVGKAIAYFLDHYKSVEARVDEVAKTLLPELAGYLHHQSLPVRRINLIGHSLGARILVKSLLASPEIARELPLNNLLLMGGAICTSSPWDKVSAPLKGRLINCHSSKDWALAMKPDTERCIGRYAIDVTPALKAKVTNVHLASFDHAAYWPQLKTVVQYTDLLQERRGMIRVDSRSSDVRFAEADVDLYPALVQARPEELKFLAELMAQKRSAAIDASVREPLKLAIELQRMGGDSFMNLARGHGVGYRQIAEDVAQRLGIKFDQPLEHVALAEIEGQVAETLIEQYKDKLSRADRQAFEAELQAAAQKEQGLFNRLDVGRSATAALSGTALAGLTGFILRRGAATAIPVVGQALAAAMLLVSGVRAFSGPAYSITTLAVLVIGVIRQRMEREALNQELDLVVQVVEAFDLPRETVMRTVATD
>NZ_CP023969.1|WP_003191984.1|4603145_4604465_+|Nramp-family-divalent-metal-transporter
MKFSLPKIATAPFCPPEVAGSVAVDPKASFFKRVLMFAGPGLLISIGYMDPGNWATAIEAGSRYGYSLLFVVLLASLAGMAVQCLCSRLGIATGKDLAQLCRERYSQRSARTQWVLAEISIIATDLAEVLGCALAFHLLLGVSLTTGIVITAFDTLLILALQNRGFRRLEAIMLALVATIGVCFFIELVLIKPYWPDVLSGFTPSLSAISDAAPLYLAIGILGATVMPHNLYLHTSIVQTRLIGKDLASKQDAVKLARIDTIGSLALALLVNAAILVLAAAAFYKTGHTDVVEIQDAYHLLDPLVGGAFASILFGIALLASGQSSTFTGTIAGQVIMEGYLNLRIPCWQRRLITRGLALIPAFLGVWLMGDDAIGKLLILSQVVLSLQLPFALYPLIRMTGDKQLMGPFVNRLPTRLLAWFLFAVISGANAWLIGQWLF
>NZ_CP023969.1|WP_032896748.1|4604477_4604735_-|antitoxin
MNATCSTLTVSLSQAKADFLKLAHQASTGQVITITRNGVAFVQLLAVRKAPQRRIGAMKGKLIIPDDFDTPLPDSLLREFEKKST

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Crispr_ID: NZ_CP023969_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_15

4858665-4858763

Orphan

Consensus_repeat	Method
TTCCCACGCAGAGCGTGGGAACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_15

>merge|NZ_CP023969|15|4858665-4858763|CRISPRCasFinder
TTCCCACGCAGAGCGTGGGAACGCATCCGGTGACGCTCTGCGTCACGCTTGGGGACGCAGAGCGTCCTGGGTTGCATTCCCACGCAGAGCGTGGGAACG

>NZ_CP023969|15|14|4858665-4858763|CRISPRCasFinder
TTCCCACGCAGAGCGTGGGAACG	CATCCGGTGACGCTCTGCGTCACGCTTGGGGACGCAGAGCGTCCTGGGTTGCA
TTCCCACGCAGAGCGTGGGAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098951308.1\|4858773_4859940_-\|cystathionine-gamma-synthase	unknown	unknown	gnl\|CDD\|223699
NZ_CP023969.1\|WP_003191649.1\|4845142_4845580_+\|DUF3995-domain-containing-protein	unknown	unknown	gnl\|CDD\|372505
NZ_CP023969.1\|WP_098951297.1\|4853158_4853584_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226695
NZ_CP023969.1\|WP_098951290.1\|4845822_4846989_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP023969.1\|WP_098951294.1\|4850158_4851613_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|273830
NZ_CP023969.1\|WP_098951301.1\|4854341_4855139_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NZ_CP023969.1\|WP_069558916.1\|4865031_4865973_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176168
NZ_CP023969.1\|WP_098951317.1\|4869302_4869788_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951315.1\|4866082_4867135_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP023969.1\|WP_098951303.1\|4855131_4855581_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240041
NZ_CP023969.1\|WP_098951306.1\|4856452_4858651_+\|OsmC-domain/YcaO-domain-containing-protein	unknown	unknown	gnl\|CDD\|132588
NZ_CP023969.1\|WP_098952674.1\|4867232_4868627_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP023969.1\|WP_060764260.1\|4859936_4861313_-\|cystathionine-beta-synthase	unknown	unknown	gnl\|CDD\|223110
NZ_CP023969.1\|WP_098951312.1\|4862235_4862718_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|226383
NZ_CP023969.1\|WP_098951304.1\|4855639_4856200_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NZ_CP023969.1\|WP_098951295.1\|4851869_4853162_-\|sorbosone-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|225044
NZ_CP023969.1\|WP_098951292.1\|4846985_4850162_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP023969.1\|WP_032897054.1\|4868646_4869096_+\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP023969.1\|WP_032897045.1\|4862777_4863962_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023969.1\|WP_098951314.1\|4864056_4864950_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176169

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951308.1\|4858773_4859940_-\|cystathionine-gamma-synthase	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	0
NZ_CP023969.1\|WP_003191649.1\|4845142_4845580_+\|DUF3995-domain-containing-protein	gnl\|CDD\|372505	pfam13160, DUF3995, Protein of unknown function (DUF3995). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 149 amino acids in length. There are two completely conserved residues (W and P) that may be functionally important.	6.59878e-19
NZ_CP023969.1\|WP_098951297.1\|4853158_4853584_-\|hypothetical-protein	gnl\|CDD\|226695	COG4244, COG4244, Predicted membrane protein [Function unknown].	1.31586e-05
NZ_CP023969.1\|WP_098951290.1\|4845822_4846989_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.94357e-79
NZ_CP023969.1\|WP_098951294.1\|4850158_4851613_+\|TolC-family-protein	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	6.73456e-72
NZ_CP023969.1\|WP_098951301.1\|4854341_4855139_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	3.34275e-06
NZ_CP023969.1\|WP_069558916.1\|4865031_4865973_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176168	cd08479, PBP2_CrgA_like_9, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 9. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.2205e-87
NZ_CP023969.1\|WP_098951315.1\|4866082_4867135_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.54364e-55
NZ_CP023969.1\|WP_098951303.1\|4855131_4855581_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240041	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	9.85901e-35
NZ_CP023969.1\|WP_098951306.1\|4856452_4858651_+\|OsmC-domain/YcaO-domain-containing-protein	gnl\|CDD\|132588	TIGR03549, TIGR03549, YcaO domain protein. This family consists of remarkably well-conserved proteins from gamma and beta Proteobacteria, heavily skewed towards organisms of marine environments. Its gene neighborhood is not conserved. This family has an OsmC-like N-terminal domain. It shares a YcaO domain, frequently associated with ATP-dependent cyclodehydration for peptide modification. The function is unknown. Fifteen of the first sixteen members of this family are from selenouridine-positive genomes, but this correlation may not be meaningful.	0
NZ_CP023969.1\|WP_098952674.1\|4867232_4868627_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.7465e-152
NZ_CP023969.1\|WP_060764260.1\|4859936_4861313_-\|cystathionine-beta-synthase	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	7.59572e-134
NZ_CP023969.1\|WP_098951312.1\|4862235_4862718_-\|VOC-family-protein	gnl\|CDD\|226383	COG3865, COG3865, Uncharacterized protein conserved in bacteria [Function unknown].	1.25106e-74
NZ_CP023969.1\|WP_098951304.1\|4855639_4856200_-\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	2.29433e-60
NZ_CP023969.1\|WP_098951295.1\|4851869_4853162_-\|sorbosone-dehydrogenase-family-protein	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	2.36818e-97
NZ_CP023969.1\|WP_098951292.1\|4846985_4850162_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP023969.1\|WP_032897054.1\|4868646_4869096_+\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	1.05602e-87
NZ_CP023969.1\|WP_032897045.1\|4862777_4863962_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.52073e-94
NZ_CP023969.1\|WP_098951314.1\|4864056_4864950_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176169	cd08480, PBP2_CrgA_like_10, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 10. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.87735e-98

>NZ_CP023969.1|WP_098951306.1|4856452_4858651_+|OsmC-domain/YcaO-domain-containing-protein
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQAGPEFVIEEVENLDADAQALLMPNSTSEAGTYIAGKDLPLEQTIANMSAILAGLGMKIEIASWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEDLANAPFVHYPDERWFQPGPNDELPSEILDAYCLKVYNREGELRGSHLFDTNSGNEARGIVSLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEFALPDVPADVLAKYPGILAGIEGLEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGQAVTEPNNFVEHFIDSSGVVSWRFFSAQSDYEFVEWDFSGQGEDSNAQEAATLFGILEGMGKESYMAVYEHLGATACRILVPDYSEIYPVDDLIWDNTNKALFFREDILNLHRLDEEELQALVERLIESELDDYTDITTLIGIEFDDNTAWGQLTILELKLLIFLALQQYEEAKECVEMFLQYNDNTVERGLFYQAMNAVLEMELDDDLELADYEANFRRMFGNERMDAVIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIDSYKKLHTARANITQG
>NZ_CP023969.1|WP_098951304.1|4855639_4856200_-|cysteine-hydrolase
MEPIATNAALLIIDMQKGMADPTLGRRNNPDAELHIQHLLNAWRQAQRPIIHVRHISRSDASVFRPGQPGCEFQDALHPLAHEHVVEKNVPDAFSATGLERWLHVRSIQQLVIVGVITNNSVESTARSGGNLGFDVIVAEDACFTFDQTDLSGRLWAAEDVHALSLSNLAMDYARVFQTSEILASH
>NZ_CP023969.1|WP_098951303.1|4855131_4855581_+|NUDIX-domain-containing-protein
MRERKAARLLVINPAQQVLLFRFVHKEGALAGQDYWATPGGGVEAGETFHSAAIRELREETGITVSSVGECVAERNVTLMLPCGETVLAVERYFVVHAPSEALSRAEWTQQEAQVMADHRWWSAEALRATSDTVWPQALSQMLEDAGVF
>NZ_CP023969.1|WP_098951301.1|4854341_4855139_+|nucleotidyltransferase-domain-containing-protein
MNTQKPAGIDVDGYILTVADGPIQPEFQPLLTDICATLSRPELGLHGIYLYGSIARGEGEIGISDLDLSLILVEPPDAPVLEQLESARLALEQRHPQVTKIDFDIGHRAQVLAPENRNRWGFWLKHHCCCLWGEDLSLHFEPFRPSRAIALAVNGDFEQALTGYLVGIEQASTEHVRHRLQREASRALIRATHTLRAEDAQTWPQTLEEYVGLFVQHYPTMRVQIAYFLFEARNPSAEGEAFTTRLRAFLSWMNSAVIERNQSDA
>NZ_CP023969.1|WP_098951297.1|4853158_4853584_-|hypothetical-protein
MTTLPTYPVVRPGPLHGTLLAGTVPLFLGALLSDIAYGQTYQIQWANFASWLIAGALVFCGFSLLFALVNLVRAEHKGGRPVAYFLLLLGTWVLGLVNAFQHAKDAYAMMPTGLMLSAIVTVLAIVATWIGLTNLRSGAAR
>NZ_CP023969.1|WP_098951295.1|4851869_4853162_-|sorbosone-dehydrogenase-family-protein
MKPLNTLTLLSAALLLSACGGEGDKTQARGPDPKLPEQQSSLLPSMKIAEPTPWGDQKPKVPEGYSVTAIATDLAIPRQTLVLPNGDILVAEGRGGSAAKLKPKDVIASVIKAQGNTKVKGGNRLTLLRDADGDGTYELKTVFADNLNAPYGLAFADGKLYVANQDALVRFDYADGQTKASAPPVKVTDLPAQINHHWTKSLAVSEDGRQLYVGIGSNSNITERGMEVEIDRAMVWQIDAATGAHKPYATGLRNPTALTIQPGSGQLWTVVNERDELGPDLVPDYLTSVREGAFYGWPYSYWGQNVDPRAQPQNPAKVAAAIKPDYSLGSHVAALGVDFSIPALGEKFADGVFVGEHGSWNRDNPVGYKVIFVPFSNGKPAGEPIDFATGFRGDDGKTRGRPVGVTVDPKGALIIADDLANTVWRVTRNQ
>NZ_CP023969.1|WP_098951294.1|4850158_4851613_+|TolC-family-protein
MKQAYPAFVLSLTLLAGCGSVGPDYSAPVLPAAQRATSFGAPIAGLGPGEVEVQWWQVFDEPALSQLIQQALAANHDIGIAAARLDEAKALLRESRQGFLPSGGAALGYEHRKRSEVETPFGEQRSIETTRAAVDAAWEIDLFGRVRRSVEAAQAEAGSRQALLRNVQASVAATVAATWFDLQGIEAEQAVVADISQSQRDSLGLVGQMVSVGAATEFDRLRAEALLRNVEAVAPDLERRRAKATNALAVLLGQAPQGFKPPQARPGRETLNLRTLQVGDPAGLLARRADIAAAERTLAAATAQIGVETAGLYPDIQVQGSIGLLAGSLSALGDAGMQSNFIAPVIRWSLLDTGRVRARIAASEARTQAALIAYDQTVLRALQETDDAFQANRTAGNTLGLRLLEAAANREAASFARERFAQGEGVYLDVLEAERADFTSRRALTAARTEQRLAVVGIYKALGGGWEICERAGQACSGAAAVLR
>NZ_CP023969.1|WP_098951292.1|4846985_4850162_+|efflux-RND-transporter-permease-subunit
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIAETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFAQGTNADMAQIQVQNRVSRALPRLPEEVQRLGVVTQKTSPDILMVVHLLSPDQRYDPLYISNYAYLQVRDELSRLPGINDVLVWGAGEYSMRLWLDPDLIAARGLTAGDVIAAVREQNVQVAAGSVGQSPDSTAAFQVTVNTLGRLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGANALDVAQSVRDTMQRLQTNFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVFLRNWRASLIPLMAVPVSIIGTFAVMHLMGFSLNTLSLFGLVLSIGIVVDDAIVVVENVERHIENGEEPMQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGLLLRPRHAAVVHDPRSLRGRATRLLEVLGRPFQRAPQAYGNTVRKVVGRRGVALLAYGGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNAASLERTDAVVRQMSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKERTSADMTAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLEALVQQTQMLMTKATESGQVAGLMTSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQADADHRMQAEAIGRLQVRNAAGDMLPLSAFVTVTPSSGPDRVIHYNGYPSADISGGAMPGVSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYNSWLLPLAVLLIVPMCLLSAILGVWLVDGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLEAEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASGAGAEMRHAMGVAVFAGMLGVTLFGLFLTPVFYVVMRSLALRVQRQGASPKVQLKESAS
>NZ_CP023969.1|WP_098951290.1|4845822_4846989_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MYTKPVSLIAGALAVALTLGGCSDKAPPAVAAQPPGVPVAQVVARAVTPFVEYTGSLTAIDQVQLRPRVSGYLQSVSVPEGQFVAKGSPLFVIDPRMFQAAVNAAKARLREAEANASLAQAEHGRAEQLYAKKVVARDRLDTAIASLNAGRAQVEAARAALDTAQLDLSYTRVTAPISGRIDRALVTEGNYVTRGETPLTTIVSIDPLHVYFDVDERTYLHSLAATRQHAGTKGENAAKVMVAMLNDTTYARAGRVDFLANSADRKTGTVRVRAVVANPDGRLTPGLFAKVKLDTGAAQPRVLIADHSIGTDQGRRYVLVVGEGDKTEYRPVELGPVVDGLRVVEQGLQPGERIVVKGLVRPGMQVTPLAASIEGKPLEAPLAVGGVQ
>NZ_CP023969.1|WP_003191649.1|4845142_4845580_+|DUF3995-domain-containing-protein
MSFVIARWIVGVFTFISMVHLYWAAGGKLGSLAAIPQLPGEFASGPRPAFKPSALGTFLVAMGLVAIALLVCLRAGLYFSPVSHGALQWGISAIAVLMFARAIGDSELVGFFKKVGGSKFARLDTYFYSPLCLVLGAGLLVVAWT
>NZ_CP023969.1|WP_098951308.1|4858773_4859940_-|cystathionine-gamma-synthase
MSQPDKSAFATRVIHAGQSPDPTTGALMPPIYANSTYLQDSPGVHKGFDYGRSHNPTRFALERCVADLEGGSQAFAFASGLAAISTVLELLDAGAHIVSGNDLYGGTFRLFDKVRQRSAGHRFSYVDLSDLSAFEASLQDDTRMVWVETPSNPLLSLTDLRAVARICRARGIICVADNTFASPWIQRPLELGFDLVVHSTTKYLNGHSDVIGGIAVVGDNAELAERLGFLQNSIGAIAGPFDAFLTLRGVKTLALRMERHCSNALDLATWLEQQPQVSRVHYPGLKSHPQHDLAKQQMRGFGGMISVDLNSDLAGATRFLENVKIFALAESLGGVESLIEHPAIMTHASIPAATRAQLGIGDGLVRLSVGVEDGEDLRADLEQALAHI
>NZ_CP023969.1|WP_060764260.1|4859936_4861313_-|cystathionine-beta-synthase
MPTPSRPAVLELIGNTPLVKVSRFDTGPCTLFLKLESQNPGGSIKDRIGLAMIDAAERDGRLRPGGTIIEATAGNTGLGLALVGRAKGYRVVLVVPDKMSTEKVLHLKAMGAEVHITRSDVGKGHPEYYQDVAARLAKDIPGSFFADQFNNPANPLAHETSTAPEIWAQTQHDVDAIVVGVGSAGTLTGLTRFFKRVQPELAMVLADPVGSVMAEYSRSGKLETPGSWAVEGIGEDFIPSIADLSSVRHAYSISDADSFDHARQLLKAEGILGGSSTGTLLAAALRYCREQTEPKRVVTFVCDTGTRYLSKVYNDQWMNDAGLLQYKHYGDLRDLIARRFEDGRVISVSPDDTLLTAFQRMRLADVSQLPVLVDGQTLVGVIDESDILLGLHHDAADFSMTVASAMTNTLHTLAPNASLAELQAELDRGLVAIIADAAGFHGLITRVDLLNHLRRSLA
>NZ_CP023969.1|WP_098951312.1|4862235_4862718_-|VOC-family-protein
MNNKNTICLWYNGDALEAATFYANTFPNSAVKAVHRAPGDYPSGKQGDELTVEFTVLGIPCVGLNGGPMFKHSEAFSFQVSTDDQEETDRLWHAIIDNGGQASACGWCKDKWGLSWQISPRVLVDAVTSKDPAVAKRAFEAMMKMTKIDIATIEAAIAGN
>NZ_CP023969.1|WP_032897045.1|4862777_4863962_-|MFS-transporter
MRINPPLVALSVGAFGIGVTEFAPMGMLPGIAADLDVSIPAAGLLVSAYAMGVLIGAPIMTLATARVPRRYLLIGLMAIFTLGNLLSALASNYQTLMIARLVTSLNHGAFFGIGSIVAASLVAPEKRAGAVAAMFMGLTLATIGGVPLATWFGENFGWRTAFWGISGLGAVVMAALWWALPNAPAPKGGGLMAEIRVLGRGPVLAALALTVVGSSAMFTVFTYIAPILRDVTHASTNFVTGMLVLFGIGLTLGNVWGGKSADRSVDRTLIISLVVLIAVLLAFSVLMQWPLPAALSILLWGAASFALVPPLQMRVMEAAKDAPNLASAMNIGAFNFGNAIGAALGGAVINAGLGYPAISLAGAIMAGLGLLMVLGLSWRARRADSRSGREAVQA
>NZ_CP023969.1|WP_098951314.1|4864056_4864950_+|LysR-family-transcriptional-regulator
MDIGGRSGEMEVFTMVAEHGSLSGAARALGLTPSAISRIITRTEQRIGTRLLLRTTRAITFTAEGEAYLRGARRILADMAEVEDAITDQGAPRGRLRVSAALAHGRMTIVPLVAAFSARYPAIVVDLMLGDEVVDILGGQADVAIRFGTLADSPLTARLIGSTGQVIVASPEYLARHGTPVTPQDLLQHNCLRFNFRRAAPDWPFRVEGREFSLKVAGTIEGNSGEALAQLAKLGAGVARIGAFSVVEEVRRGELVALLEEFNPGDVEPIHAVFVGGGAMPARVRAFVDFLVEKCGG
>NZ_CP023969.1|WP_069558916.1|4865031_4865973_-|LysR-family-transcriptional-regulator
MENQNSPLVNNDPFLRDLLLFSVIAKRGSFSAAGTELGISPAHVSKRVLALEETLSCKLFNRTTRRVSITKDGETMLVWAQTIMDNVNGMLETSLGDRVEPRGTLRISTSQRMGRFHIAPVLALLRKRYPKLEVWLELVDRRTDLIGEQFDIDIRVGEVNEQNLIIHKIADSQRILCAAPSYLEERGNPNSVSELQRHDCLLFRGRDQSFGVWRLEGPNGLESVKVTGPMASNHSDVVREWAHDGFGIIMASTWDVAPSIRNGTLIRILPEHFQPANVSAVTTIRASGSMKIRVCLEFLSAHLSSGPYALRNG
>NZ_CP023969.1|WP_098951315.1|4866082_4867135_+|Gfo/Idh/MocA-family-oxidoreductase
MSKIRIAVAGAGLIGRRHIELIQASSSCELAAVIDPFELDGSYRDSLGASQYENLLDCFAEDKPDGVILATPNALHVEQTLQCIEAGVAALIEKPVAHSVEEGRRLLAVADATDAKLLVGHHRAHSPILAKAREIIRDDILGDIVAVQGSALFYKPDDYFDAAIWRRQEGGGPILINMIHEIGNLRSLCGEIVAVQAMQSSVARGFPVEDTVCIGLRFENGALGSFLLSDSTGCARSWEQTSQENASYPSYEDEDCYIISGKNGSLSVPTMRLKYYVKAEDRSWWKPFQTGHCAVDRTDPLEIQLEHFCNVIRGTETPLVSVRDGLRNLIITEAISQAAKSGSIIEIDRI
>NZ_CP023969.1|WP_098952674.1|4867232_4868627_+|MHS-family-MFS-transporter
MNTATATEQHRSKQAKKATASGWIGSALEYYDFFIYAQAAALIFPQLFFPSTDPKIAIVAAMATYGVGYIARPIGAFFLGHWGDTRGRKNVLLLCMFLMGFATMAVGLLPTYHQIGIWAPIMLVVLRLVQGFAVAGEISGASSMILEHAPQGRRGYFGSYTLQGVQAGQVLAAAIFLPLAYFMSDEAFNSWGWRIPFLLSAVVLIAGFIIRREVEEPPVFVDQTKKDEKSESPIIGAFKHSWRGMLVVVGVSLMNVIPVITTVFGAAYAVQPAYGIGFDKSVYLWIPVVGNIVAVLCIPFVGNLSDKVGRRPLIIASAFGCGLMSFAYLYAISIHSLPLAFGASLLMWGMIYQGYNAVFPSFFPEQFETRYRVSGMAISQNSGLFITAMLPALFALIAGPGTENIPLIVGGIACVCTLLAGIAAWCAPETSRIPTADLGNRDAQSTEAGEYHKARLAAMGTVKN
>NZ_CP023969.1|WP_032897054.1|4868646_4869096_+|type-II-3-dehydroquinate-dehydratase
MMKTILVLNGPNLNMLGLREPEVYGSETLADVEQTCRQYGEGLGLVIEFQQTNHEGQMIEWIHHARRRIAGIVINPGAWTHTSAAIHDALIAAEVPVIEVHISNVHRREDFRHFSYVSRVAKGVLAGFGTDGYRMAIQHYASCLEQSNA
>NZ_CP023969.1|WP_098951317.1|4869302_4869788_+|hypothetical-protein
MDINLLTESMLGHWRAPSGVWQCEFQFGSRLIYVQHHNDEPPYARLAAAQRAVKATWDDLPQALRFAEQHCKAQMPELMRLYETHMPWESPLFVYSIHFDLDKPYPSYTISKNPDFDWDRILIDEDELCQDQSVCMEQYEPKDDFWVYVRRVGFQQFELRD

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Crispr_ID: NZ_CP023969_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_16

4923494-4923590

Orphan

Consensus_repeat	Method
GCAAGCCCGCTCCCACAGTTTGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_16

>merge|NZ_CP023969|16|4923494-4923590|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTTGGACCGCGGGGTGTCAGGTAGAGAAGTGTCGGCTGATAGGCCGCCATCGCAGGCAAGCCCGCTCCCACAGTTGGAT

>NZ_CP023969|16|15|4923494-4923590|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTTGGA	CCGCGGGGTGTCAGGTAGAGAAGTGTCGGCTGATAGGCCGCCATCGCAG
GCAAGCCCGCTCCCACAGTTGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_003191568.1\|4914471_4914852_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951359.1\|4915090_4917370_+\|acylase	unknown	unknown	gnl\|CDD\|376618
NZ_CP023969.1\|WP_032897145.1\|4928937_4929885_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|223406
NZ_CP023969.1\|WP_098951379.1\|4933647_4935711_+\|maltose-alpha-D-glucosyltransferase	unknown	unknown	gnl\|CDD\|131508
NZ_CP023969.1\|WP_098951368.1\|4924042_4925026_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NZ_CP023969.1\|WP_098951362.1\|4919661_4920471_+\|META-and-DUF4377-domain-containing-protein	unknown	unknown	gnl\|CDD\|379548
NZ_CP023969.1\|WP_098951371.1\|4925981_4927229_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP023969.1\|WP_098951361.1\|4917891_4918623_+\|peptidoglycan-editing-factor-PgeF	unknown	unknown	gnl\|CDD\|319354
NZ_CP023969.1\|WP_098951370.1\|4925063_4926011_+\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP023969.1\|WP_138183567.1\|4908908_4913738_-\|membrane-targeted-effector-domain-containing-toxin	unknown	unknown	gnl\|CDD\|350611
NZ_CP023969.1\|WP_032897123.1\|4918716_4919286_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153234
NZ_CP023969.1\|WP_098951373.1\|4927231_4928803_-\|aldehyde-dehydrogenase-(NADP(+))	unknown	unknown	gnl\|CDD\|143447
NZ_CP023969.1\|WP_098951364.1\|4920906_4921848_-\|aromatic-alcohol-reductase	unknown	unknown	gnl\|CDD\|187569
NZ_CP023969.1\|WP_032897151.1\|4932673_4933462_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP023969.1\|WP_044274166.1\|4922516_4923125_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023969.1\|WP_044274169.1\|4921944_4922394_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP023969.1\|WP_098951377.1\|4930860_4932486_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP023969.1\|WP_014718591.1\|4914266_4914461_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951375.1\|4929922_4930849_-\|4-hydroxyproline-epimerase	unknown	unknown	gnl\|CDD\|172473
NZ_CP023969.1\|WP_138183568.1\|4923691_4923949_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951359.1\|4915090_4917370_+\|acylase	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	3.51015e-141
NZ_CP023969.1\|WP_032897145.1\|4928937_4929885_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|223406	COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane].	2.93954e-65
NZ_CP023969.1\|WP_098951379.1\|4933647_4935711_+\|maltose-alpha-D-glucosyltransferase	gnl\|CDD\|131508	TIGR02455, trehalose_synthase_putative, trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits. [Energy metabolism, Biosynthesis and degradation of polysaccharides, Cellular processes, Adaptations to atypical conditions].	0
NZ_CP023969.1\|WP_098951368.1\|4924042_4925026_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.06499e-97
NZ_CP023969.1\|WP_098951362.1\|4919661_4920471_+\|META-and-DUF4377-domain-containing-protein	gnl\|CDD\|379548	pfam14302, DUF4377, Domain of unknown function (DUF4377). This domain family is found in bacteria and archaea, and is approximately 80 amino acids in length.	2.07825e-27
NZ_CP023969.1\|WP_098951371.1\|4925981_4927229_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.68925e-42
NZ_CP023969.1\|WP_098951361.1\|4917891_4918623_+\|peptidoglycan-editing-factor-PgeF	gnl\|CDD\|319354	cd16833, YfiH, protein of unknown function YfiH. This subfamily contains YfiH, a protein of unknown function from Shigella flexneri, E. coli, and many similar proteins which collectively are often called DUF152. The structure of YfiH reveals a distant homology to Rho-activating toxins cytotoxic necrotizing factor 1 (CNF1) as well as chemotaxis protein CheD that stimulates methylation of methyl-accepting chemotaxis proteins (MCPs), all having an invariant Cys-His pair forming a catalytic dyad, and is required by the CNF-1 toxins for deamidation activity.	1.716e-55
NZ_CP023969.1\|WP_098951370.1\|4925063_4926011_+\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	1.00811e-76
NZ_CP023969.1\|WP_032897123.1\|4918716_4919286_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	9.21335e-50
NZ_CP023969.1\|WP_098951364.1\|4920906_4921848_-\|aromatic-alcohol-reductase	gnl\|CDD\|187569	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs. PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.55243e-71
NZ_CP023969.1\|WP_032897151.1\|4932673_4933462_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.09978e-29
NZ_CP023969.1\|WP_044274166.1\|4922516_4923125_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.89564e-36
NZ_CP023969.1\|WP_044274169.1\|4921944_4922394_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	8.17292e-27
NZ_CP023969.1\|WP_098951377.1\|4930860_4932486_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.20916e-53
NZ_CP023969.1\|WP_138183567.1\|4908908_4913738_-\|membrane-targeted-effector-domain-containing-toxin	gnl\|CDD\|350611	cd14729, RtxA-like, C2-2 like domain of various multidomain toxins, including RTX-containing like proteins. This group contains mostly poorly-characterized C2-2 like domains of multidomain bacterial toxins, including Pasteurella multocida toxin PMT (also known as dermonecrotic toxin), MARTX (multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA) proteins from Vibrio vulnificus, as well as bacterial effector protein from Pseudomonas syringae (type III effector HopAC1). MARTX domains at the N- and C- termini act in the translocation of the central domain across the eukaryotic plasma membrane, where it is proteolytically released. These are related to Pasteurella multicida toxin, which has structural and sequence similarity to the TIKI/TraB family of proteases. However, while this group of multidomain proteins shows fairly strong conservation of the active site residues of this family, the Pasteurella multicida toxin does not.	5.92042e-32
NZ_CP023969.1\|WP_098951375.1\|4929922_4930849_-\|4-hydroxyproline-epimerase	gnl\|CDD\|172473	PRK13970, PRK13970, 4-hydroxyproline epimerase.	2.99071e-152
NZ_CP023969.1\|WP_098951373.1\|4927231_4928803_-\|aldehyde-dehydrogenase-(NADP(+))	gnl\|CDD\|143447	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.	0

>NZ_CP023969.1|WP_044274166.1|4922516_4923125_+|LysE-family-translocator
MFMSTSLLSAFVLFAFVSSITPGPNNTMLLASGVNFGFRRSMPHALGISIGFMLLVICVGLGLGEVFKLFPWAYTLLRYVGAAYLLYLAWKIANAGGMSDNPDEHGKPMTFLGAAAFQWVNPKAWIMALGAITTYTPAEGYVTNVLVIALVFAVVNLPSVCVWVGCGSGLRNLLREPRWLRMFNWSMAGLLVLSLYPMLFLG
>NZ_CP023969.1|WP_044274169.1|4921944_4922394_+|helix-turn-helix-transcriptional-regulator
MTDHETLSQAEVICQSLREEDDGVRREVLAHAGSRWSLGILHALGVYGAMRHAEIKRQMTGVTQRMLTKTLRAMERDGLLVRREFGEIPPRVEYELTPLGRELLIRMSPIWTWVVENVEDFRKARRVFDSQEGKKPAWQVPTPVPDAPR
>NZ_CP023969.1|WP_098951364.1|4920906_4921848_-|aromatic-alcohol-reductase
MPEMTPLPSQSILVLGAGELGLPVLRNLAREAKRAPGSALSVLLRESTINTQVPEKKVEIDELRGLGIQMVAADLVNDSIDQLAKVFARFDTVIGCAGMVAGRETPMKLATAALKSGVKRYFPWQFGVDFEVIGRGSPQDLFDAQLDVRELLRAQDNTEWVIISTGMFTSFLFEPVFEVVDFDNNTVNALGSLENSVTLTTPDDIGTLTAQIVFFEPRLRNQIVYLAGDTVTYEQVASMLERVLDRPFKRNVWTVDYLMQALEQDPTHHIKKYRAVFAQGKGVAWPKAVTFNEQQSIPVTTAEQWARENLADH
>NZ_CP023969.1|WP_098951362.1|4919661_4920471_+|META-and-DUF4377-domain-containing-protein
MKQKILLVAVCAALIQGCAAPSKSHEESPSMPTTSAAVAQPTLSAYDWSLVSATDASGKPLVAMNKGIERKLRVAFGDKNLSISGGCNRQFGGYRYQDGVVKVQPLASTLMACDKSLMDLDAQVGRLFKGDLRAVITGDNMAPMLQLTTADGSVLKLQGEATPQTRYGSEGEVKFLEVAAKTVKCSHPLIPNYQCLQVRERRYDDAGLQLATQDTWHPLYQPIEGFVHHDGVRTVLRVKQYEWKNPPADAPSTVYVLDMVVEQDASGSK
>NZ_CP023969.1|WP_032897123.1|4918716_4919286_-|DJ-1/PfpI-family-protein
MPRVGLILTPGFADWEYAFIAGTASAFYGIDVRFFASATGQFRSQGGLAVTVDSSLQQCLDWKPDVVVVIGGMVWERAEAPDIREFLHASRSNGATIAGICGGTLALARASLLDTVAHTSNSADFLQQNAVGYEGRALYRSSPVAVVADRVITAPGPAPVSFTCAVFEAAGLSCETTSQFRSMLAAEHR
>NZ_CP023969.1|WP_098951361.1|4917891_4918623_+|peptidoglycan-editing-factor-PgeF
MTYLSSLLFEIPGVDHGFETSGNLTLPEGTLYCAQVHGTHIVDADGKGRDERPVADALFSRGAQGAIAIITADCLPVLVASVDQPLVAAIHAGWQGLKAGILGHSISRLEKEGASLTGLRIAIGPSIGPCCYEVSRKFVEDIEHADSHLWQNDSAPWTHHRAPPASAPWVEPEITHNEAWFDLRKYALRHLVASGVSIEQIQVLQHCTYCHSADLGSYRRRSHQVEAKSFQYSWIRRSRDPVS
>NZ_CP023969.1|WP_098951359.1|4915090_4917370_+|acylase
MIISNGLSRVGVAGLLLGLSLAASAREQMTQASADIRRTSYGVPHIRAVDERGLGVGMGYAYAQDNLCLLANEVTTVNGQRARFFGPDQATLEERNNLASDVFFNWLNTPEAVAAFWKAQTPAMQQRIEGYVAGYNRYLKEQGAPAQCQAAWVRPLVKEDLVKLTRRLLVEGGVGQFAEALVGAAPPLATASVQLGTKAFAQAATNQQRFTLDRGSNAVAVGRDRSFNGRGMLLANPHFPWVGGMRFYQMHLTIPGQLDVMGAALPGLPVVNIGFNRHVAWTHTVDTSKHFTLYRLTLDPKDATRYLLDGKSIPLDKTAVTVQVKQADGSLKAVSHTVFSSQFGPVVQWPGKLDWDSHYAFSLRDANLGNDRVLQQWYAMNRAGSLKELQNSVHTLQGIPWVNTLAADDQGQSLYMNLSVVPNVSAAKLATCSDPRAGLQMIVLDGAHSACAWDIDPRAAQPGIFPADQLPQLQRTDYVQHSNDSAWMANPKAPLSGFSPVISQDHIGLGPRARFALQRLQTLEKQPISITDLQNMVMDNEVYLAGQVMPDLLTFCANQLGTDANALQPLCTSLKNWDQRANLDSGVGLVHFINLMQHLQPLPDAWRVAFDPAHPLTTPSGLAIDRAPVAKALREAMLASSAEVGKLGQTRWGDIQVSGQTPMHGGPQELGIYNAMQTVPRADGKREVVSGTSYLQIVTFDDKGPNALGVLAFSESSNPASAYSKDQTQAFSQKKLRPLPFTEAQIKADPHYQIHTVKE
>NZ_CP023969.1|WP_003191568.1|4914471_4914852_-|hypothetical-protein
MYNPQVPTDGHSKATDTHFGKGTQAFGNAPEQQGNQRIRHLLKCFGLRTSLIRLKVIDALLTAADNQRTLGVRGVHSHLLELGIPLSFLSVREVLKRLCSEGVITLNADKSYSLHEEAAKVLESRA
>NZ_CP023969.1|WP_014718591.1|4914266_4914461_+|hypothetical-protein
MTQKQRLKYSLLIALAVLGAMFGLSYLQNTGVISEKTFQYLAIAIAVVVVVINGIMRRKVKPNF
>NZ_CP023969.1|WP_138183567.1|4908908_4913738_-|membrane-targeted-effector-domain-containing-toxin
MLTGIAHPRLRRDVCVDETTQASHTPQISPSAQTPSAPEVEAIVPASATRSDLIKGLQITDQRLLLNQYQQLNQDIQALLLRQPTLSSVIEQQLARSLGITPPLDVSSLYVHRYHTDEQGQRTLVSVEGITEALFKALRQLKTSPDAEPSTSTVGMEVGFYRSDSPSESTQQLQTRDTLLSIAQTIEKQLPLSLARFWTEPRTGEPNPESPQNELLAIHREMLSTLAALGVEDGALTPAAKSLIDKAFEYPTLEARERAMKEGDRPGVYPLKLEVPRPAGSLLAGAFLITSSDGSSATRPFNSAQTDRTLLPGQQQGLTVLYTPRDGYETFDSPAKALAALRQRINDDPDAAQQLLQSLPIEVQRSLKDDWQTHLSQNLSPVKVDVIAAGVPQLLERQRQQVSNELQALYDSQSQEPILVDPWRHLLTERGLHEAADLGWHFDGDNALLTRTQWLDSRSHNQDARQALDQSLGNQKNWQYLAQTLNESIQTLPEKPTARDVSAILKKTPMNIAPDSGHYQSYIRAPGMSVSVEAFLTENGLPLPKTLDDLLALAQTANVRAQQHPLGNFAGALSWPLPLSVENQRELFNVVACNSAGLEGLPLQNPSWGALDYLASAVSLSPTDMQDPAKALEKLLGSPRYKALGEAIQNKINGIATHSSINDYVLAAIHLGLDHESIDHPSGSRVAGFDLAADTFWNKPPSDIISALAEHLSTSGKTSTQTAALGARLLLGRVAPQFLVKDIPAIVTVGSMAWANLCLAVARIEAQTPGKAASMSFGEVMLAAEDTPPASEAVQKAVLMDWAVANQITHVDPSGDYTQENIEYARTVFNRQLDALKVMSERLETPMPNRRAMALALLKEKFGGDIDFEEKCLRINYGHESIGPRFGPAHSMLDLTMEGMKLDEYWQRTDGATISKQTFDDFVALTRDKAQYNVVSEFNKKFTEVTNLYKDINKDLVMNAITHLPLEDRTQLNYGKIRFFKENSYRVSYIPFVGEKLFHSSATIRVQTELNGKKQSYLFDTEKGTIQKTGSHPADHKPVTFSDEVIRVEEYSPNPANTSFEHEKPLYHGSNQNHFQNHRIQEVAETVVKGLGIDSDAVRRLAEGRTAREQQRDTLTTIGEFLLDLIPLRSAITHFRNGNIKDGAIDLTFDLFGFLTAGVAMVGKLAKAVGKTGNALAKVARSGRIIGATAFSAFNPLGGLGDLTIGAGKVLMEGASAARAGVQRVRGMATGGELVKASTRYEAAATGLFKVGEQQVQGSAIKHNGKWYAYDAMTQKPYGAAREFSPADLLMPPSPNLHDTTTSSRNGVRHNPLSRASRPSKAVKRVPLPEDEYATSRSTNGYLVLDHFTPNRIKQTREKFVLEKSGYLQDAAKGERPRAATVPDIEDALTPNQTFEKALENTDVLVLGEDHTEVAGLIALRDGMKTFHEKGVSAIYLEGTTLDPYGLLDDRSFRHALKRRPGGEKIYEELITEAEKYGIELLPLEHKFLTRHSDTPGYFEGLGKLDKNSPEYLALSKQRLEEVNYYGARQIMKNELGGKSVVLVGRSHMNTAEGVYGIAELTGGIGIGVYQKSDIAHSGGRKAGATRDTSVRISSRDDTVGDLQIDIKA
>NZ_CP023969.1|WP_138183568.1|4923691_4923949_+|hypothetical-protein
MPMPMVNTKKPNRKIAILVIRPPRGRGRQECRDGAIVRLKGFSIQAQIEKKKPYQITAQRLGRGFSSEQLLSRSAPWPVHALSAT
>NZ_CP023969.1|WP_098951368.1|4924042_4925026_+|GlxA-family-transcriptional-regulator
MQGKNLRYLSDNPQQSTSVSRVGFLLLEHFSLPAFTQTLDTLVTANLLRPDLFATRTFGWGEGEVISDLGLVIRPDANLMLASLQDLDLLVICGGFRTELKASEPFIHWLRSAGEAGVRLAGLWNGSWFLGRAGLLQGYRCAIHPEHRPALAEVSKAAQVTSEPYVIDRDRLTASSPSGAFHMALDWIKSLHGKALVEGIEDILAFEESRYRRIKPTENMCVSAPLREVVKLMDANLEEPLELDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVDVLVACGFVSPSHFSKCYSAYFGYRPSKEKRLVK
>NZ_CP023969.1|WP_098951370.1|4925063_4926011_+|ADP-ribosylglycohydrolase-family-protein
MDITLLDRYRGSLLGLACGDAVGTTVEFMPRGSFSPVTDMLGGGPFSLKPGQWTDDTSMALCLAESLLRKGGFDAVDQMGRYLNWWKWGYLSSTGECFDIGMTVREALEQFEQSGNAFAGSTHPYSAGNGSMMRLAPVVLFYFPDRAHIHLFAEQSSRTTHAAQEAIECCLLLAEAISNALSGVPKKQVLSFSHTVLSAPKVKAIASGDYRDKTSAQIVGSGYAVASLEAAFWCFDQTSNFADAILTAANLGDDADTTAAIVGQLAGAYYGVQAIPADWLHKLWMRDEIQETADALFNISHLQQHGSETIQPIRL
>NZ_CP023969.1|WP_098951371.1|4925981_4927229_-|FAD-binding-oxidoreductase
MAEPNQADIVVVGAGIIGVACALQLARQGRRVVVVDAQAPGMGASYGNAGHLATEQVFPIADLSILKRLPAMLLDPMGPLRLDWAYLPRALPWFIRLLLNLRRAPYQRTVAGLRALNEGSLGAWQRLLQSIGQAQLLREDGSLLVYERAESRAALDAVQRRMTQQGVAVDFWSGDAVRKAAPQLSDALQGGLFFPATGHFLDPYTVVGELVNAAKAEGVKFLQQRVLDARLEGSGVSLMTDQGVLTAQHVLIACGAHSAKLTAALTGKQVPLDTERGYHLMLPHEQQRLPFAVTSLERKFIMTPMTGGLRLAGTVEFAGLDRPANIQRAWQLHRLSKGLFRHDLSDSEATPWMGFRPSLPDSLPIIDRVCEGKVLLAFGHQHLGLTQAAVTAERVGQLAAGERVPELQPYRLDRF
>NZ_CP023969.1|WP_098951373.1|4927231_4928803_-|aldehyde-dehydrogenase-(NADP(+))
MTLTGKLLIGQQSISGHRDAIRAINPATNTPLEPAYAGGDEQHVEQACALAWAAFDAYRETTLANRATLLETIATHIEALGDELVERACAETGLPRARIEGERGRTCGQLRAFARTVRLGEWLDVRVDTAQPQRQPLPRADLRQRHIALGPVAVFGASNFPLAFSVAGGDTASALAAGCPVIVKAHNAHPGTSELVGCAIAQAVKHCGLPEGVFSLLYGAGNEVGIALVSDPRIKAVGFTGSRSGGIALCQAAQARPEPIPVFAEMSSINPVYLFSAALEARSEALAEGFVASLTQGAGQFCTNPGLVIALQGVALDRFIQSASDRLSRCSAQTMLTPGIFNAYETGVKTLAQHANIAANGLPATGPNQGQAHLFVTQAEAFLNNEHLQAEVFGAASLVVQCRDVEQMRQLSEHLEGQLTATLQMNDTDLPHARALLQVLERKAGRLLVNGWPTGVEVCDAMVHGGPFPATSDARSTSVGTAAILRFLRPVCYQDFPDALLPTALQHDNPLRLRRLLDGQREA
>NZ_CP023969.1|WP_032897145.1|4928937_4929885_-|dihydrodipicolinate-synthase-family-protein
MSDNIFTGCMPALMTPCTAERQPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAQRQEGVARLVAAGVPTIVGTGAVNSREAVSHAAHAAKVGAHGLMVIPRVLSRGASVTAQKAHFAAILNAAPNLPAVIYNSPYYGFATRADLFFELRREHPNLIGFKEFGGAADLRYAAENITSQDDDVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKKAAKGDAKARRQARELEAALAVLSSFDEGCDLVLYYKHLMVLNGDQGYALHFNETDGLSAAQRRYAEQQYALFRQWYANWSAEQNAA
>NZ_CP023969.1|WP_098951375.1|4929922_4930849_-|4-hydroxyproline-epimerase
MKRLHVIDSHTGGEPTRLVMSGFPALVGDTIADQLDHLRTHHDQWRRACLLEPRGNDVLVGALYCAPVTPGATCGVIFFNNAGYLGMCGHGTIGLVASLHHLGLIQPGVHSLDTPVGPVAATLHDDGSVTLRNVPAYRYRKQVPVEVPGHGVVLGDIAWGGNWFFLVSDHGHELQMDNVEALTDYTWAMLKALEAQGIRGADGALIDHIELFADDAHADSRNFVMCPGKAYDRSPCGTGTSAKLACLAADAKLAAGEPWVQASITGSQFLGRYEWDGEHVRPFITGRAYMTADSTLLIDEQDPFAWGI
>NZ_CP023969.1|WP_098951377.1|4930860_4932486_-|APC-family-permease
MSGQGKFKKQLSLMDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGIVYCELGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPQLTRAGSSDPTTLGWLVQFALLCLFFVLNYRSVKTFAIANNLVSVFKFIVPLLVIGVLFTFFKPENFQVHGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSVLLSTAIYVLLQTAFLGGVPTEMLANGWAGISKELALPYRDIALALGVGWLAYLVVADAVISPSGCGNIYMNATPRVVYGWAQTGTFFKVFTRIDEKSGIPRPALWLTFALSVFWTLPFPSWEALINVVSAALILSYAVAPVTVAALRRNAPDMARPFRVKGMAVLGPLSFIIAALIVYWSGWNTVSWLLGLQILMFVVYLLCARWVPTAHLNLKQQVRSSAWLIGFYAVTILLSKLGSFGGIGVISHPFDTLVVAACALGIYYWGAATGVPAHLVRLEQEEDESEAVSDVHYSAPLSPTTH
>NZ_CP023969.1|WP_032897151.1|4932673_4933462_+|AraC-family-transcriptional-regulator
MLQSAFASLFQGSRPHSIEQLLSGVEQLLPMLDVLPNAAIFIKDIDARYVLANRTLVQRCGLKQLQPLLGKTSAEVFPAQLGPGYTEQDRRVLKQGLVLEDQLELHLYGTREPGWCLTHKWPLYNQLGAIIGLAGISVDLQSASETHPAYQRLAAVDEHIRSHFNRRVTLGELTRIAGISVAQLERYCKRVFHLTPRQMIQKVRLEHARRLLHTELPITEVALQCGYTDHSAFTRQFKSSTGFTPRQYRQATQGGSAGECLL
>NZ_CP023969.1|WP_098951379.1|4933647_4935711_+|maltose-alpha-D-glucosyltransferase
MTAANNDHVNWLVQHSMLHAARQRAKLYSGQGRLWQQPYAQTRPRDASALSSVWFTAYPASIVTREGGTVLEALGDETLWHTLSKIGIQGIHNGPLKKSGGLSGTEHTPTIDGNFDRISFDIDPQLGTEAQLQALTRMAAAHNAVIIDDVIPSHTGKGADFRLAEMAYEDYPGLYHMVEIREEDWPLLPDVADGRDAQNLSPSQVDALRDKHYIVGQLQRVIFFEPGVKETDWSATPVVLGVDGKPRRWVYLHYFKEGQPSLNWLDPSFAAQQMIIGDALHAIDVMGAKILRLDANGFLGVERKLDGTAWSESHPLSITGNQLLGGAIRKAGGFSFQELNLTVDDIASMSHGGADLSYDFITRPAYQHALLMGDTEFLRLMLRQMHSLGIDPGSLIHALQNHDELTLELVHFWTLHAHDSFLFQGQTFPGNILREHIREQMYERLTGEHAPYNLKFVTNGVSCTTASIITAALGIRDLEAITPTDIQQIRQIHLLLVMYNAMQPGVFALSGWDLVGALPLAAEDVAHLMADGDTRWIHRGAYDLVDLNPDAELSAGQMPRSKSLYGSLNSQLQDPESFASQLQKILAVRRAYDIAASRQILVPDVEHPGLLIMVHELPAGKGTQITALNFGATPITETLHLPNIAPGPVVDIINERVEGDLTEEGAFTITLDAYEGLALRVVSSTPM

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Crispr_ID: NZ_CP023969_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_17

5126762-5126859

Orphan

Consensus_repeat	Method
GCTCCCACATTTTTGATCGTGGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_17

>merge|NZ_CP023969|17|5126762-5126859|CRISPRCasFinder
GCTCCCACATTTTTGATCGTGGGGTTTCAGGTAGATAGGTATCGGCTGGTAGGCCGTCATCGCAGGCAAGCCAGCTCCCACATTTTCGATCGTGGGGT

>NZ_CP023969|17|16|5126762-5126859|CRISPRCasFinder
GCTCCCACATTTTTGATCGTGGGGT	TTCAGGTAGATAGGTATCGGCTGGTAGGCCGTCATCGCAGGCAAGCCA
GCTCCCACATTTTCGATCGTGGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098951546.1\|5123199_5123541_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225981
NZ_CP023969.1\|WP_032897426.1\|5119050_5120415_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP023969.1\|WP_014718395.1\|5126090_5126363_+\|DUF1652-domain-containing-protein	unknown	unknown	gnl\|CDD\|311697
NZ_CP023969.1\|WP_098951562.1\|5143895_5144897_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951559.1\|5139420_5142084_+\|ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|372629
NZ_CP023969.1\|WP_098951560.1\|5142226_5142850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951549.1\|5125023_5125833_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP023969.1\|WP_003191149.1\|5116136_5117570_-\|M10-family-metallopeptidase	unknown	unknown	gnl\|CDD\|369942
NZ_CP023969.1\|WP_098951542.1\|5121402_5121870_-\|M10-family-metallopeptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|369942
NZ_CP023969.1\|WP_044273695.1\|5130390_5132034_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|236050
NZ_CP023969.1\|WP_098951538.1\|5117919_5119041_-\|P1-family-peptidase	unknown	unknown	gnl\|CDD\|239071
NZ_CP023969.1\|WP_032891964.1\|5136384_5137407_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176229
NZ_CP023969.1\|WP_032897442.1\|5146284_5147220_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612
NZ_CP023969.1\|WP_169918352.1\|5134254_5135679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951540.1\|5120614_5121400_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP023969.1\|WP_098951544.1\|5122059_5123139_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP023969.1\|WP_098951556.1\|5132814_5134218_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP023969.1\|WP_098951548.1\|5123567_5124974_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
NZ_CP023969.1\|WP_098951554.1\|5129580_5130276_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP023969.1\|WP_098951552.1\|5126900_5129363_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223288

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951546.1\|5123199_5123541_-\|cupin-domain-containing-protein	gnl\|CDD\|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	1.13255e-40
NZ_CP023969.1\|WP_032897426.1\|5119050_5120415_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.77089e-30
NZ_CP023969.1\|WP_014718395.1\|5126090_5126363_+\|DUF1652-domain-containing-protein	gnl\|CDD\|311697	pfam07865, DUF1652, Protein of unknown function (DUF1652). This is a family containing hypothetical bacterial proteins.	7.0714e-29
NZ_CP023969.1\|WP_098951559.1\|5139420_5142084_+\|ATP-binding-domain-containing-protein	gnl\|CDD\|372629	pfam13538, UvrD_C_2, UvrD-like helicase C-terminal domain. This domain is found at the C-terminus of a wide variety of helicase enzymes. This domain has a AAA-like structural fold.	9.62426e-09
NZ_CP023969.1\|WP_032897442.1\|5146284_5147220_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	1.51196e-24
NZ_CP023969.1\|WP_098951549.1\|5125023_5125833_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	4.32241e-18
NZ_CP023969.1\|WP_003191149.1\|5116136_5117570_-\|M10-family-metallopeptidase	gnl\|CDD\|369942	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.	1.69245e-108
NZ_CP023969.1\|WP_098951542.1\|5121402_5121870_-\|M10-family-metallopeptidase-C-terminal-domain-containing-protein	gnl\|CDD\|369942	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.	2.7973e-12
NZ_CP023969.1\|WP_044273695.1\|5130390_5132034_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|236050	PRK07564, PRK07564, phosphoglucomutase; Validated.	0
NZ_CP023969.1\|WP_098951538.1\|5117919_5119041_-\|P1-family-peptidase	gnl\|CDD\|239071	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates. DmpA is synthesized as a single polypeptide precursor, which is autocatalytically cleaved to the active heterodimeric form. The cleavage results in two polypeptide chains, with one chain containing an N-terminal nucleophile. This group represents one of the rare aminopeptidases that are not metalloenzymes. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	2.64356e-167
NZ_CP023969.1\|WP_032891964.1\|5136384_5137407_-\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176229	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.93616e-134
NZ_CP023969.1\|WP_098951540.1\|5120614_5121400_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	6.58684e-17
NZ_CP023969.1\|WP_098951544.1\|5122059_5123139_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.81417e-171
NZ_CP023969.1\|WP_098951556.1\|5132814_5134218_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.30944e-67
NZ_CP023969.1\|WP_098951548.1\|5123567_5124974_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	7.59188e-64
NZ_CP023969.1\|WP_098951554.1\|5129580_5130276_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.83909e-75
NZ_CP023969.1\|WP_098951552.1\|5126900_5129363_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	4.44691e-23

>NZ_CP023969.1|WP_014718395.1|5126090_5126363_+|DUF1652-domain-containing-protein
MNKVGNMNKVTFPNACQLMRWHFHPMGFEGSMDAPGSMIARLFDRASGETLIAIAGIPCATVMNAADVERIIEAVEDELESFVPPVSLRA
>NZ_CP023969.1|WP_098951549.1|5125023_5125833_-|helix-turn-helix-domain-containing-protein
MPDIAPDDEYQNSQATGALVLRHHLCWRHRDLDGVMAYYHPDIQYHDFFQNRVMGYAQLREYLQASMPREADEAIEHTDRIRADGDTAFIQYRITLRGGQGLVSFRTSEAITVRDGLIWRVNEYASLVHEQPTQALRPTVIRLGLSPQQLGYMANDLQQYFERQQPYLDPELDLQRVAKACGYSRNQMSYLLNQVLGQSFYRYVNQARLQHLLAALDCATPPIKVDDLAFAAGFNSLSAFYSAFRQHTGQSPKAYLKQISLRARAQDSP
>NZ_CP023969.1|WP_098951548.1|5123567_5124974_-|FAD-dependent-oxidoreductase
MPAWRSISLWMDQLDDPLVARPSLEHDLDVNVAIIGAGYTGLWTAYYLKRQAPELKIAIIEAQTAGFGASGRNGGWLMGNLLGEDRLLSGLAPQQRRASFDLLHGIPDEVAQVLAREGIDCDYRKGGALYCAARYPEQEGSLRRYLDKLYAQGLTEDDYRWLSPQQLAEQVRIAKPYGGIYAPHVATINPAKLVRGLARAVENLGVAIYENSPVTHWQSGSLRTGQASVRAAWVVPAVEGYANTLPPLGRYQLPVQSLIVATEPLPASTWADIGLSQGQAFGESSRQVTYGQRTADNRLVFGARGGYQFAGKLRHNFDLTDSEVELRRYLFGELFPQLKKARITHSWGGNLGMSRRFRPHMLCDPATGIALSGGYGGEGVGATNLGGRTLADLILGRDTLLTQQPWVIREGGLKALKPWEPEPCRWLGYNAIIRSFVHEDQVLANPNTPPWRRKLATSIAGFMEGFMH
>NZ_CP023969.1|WP_098951546.1|5123199_5123541_-|cupin-domain-containing-protein
MSITQFKDTLNTPLPDSSPVAAPLGEPIAVASTLSVERNDGVETGIWACTPGRWRRQITSQEFCHFIEGRCTFTPDNGETLHIQAGDALMLPANSTGIWDIQETVRKTYVLIL
>NZ_CP023969.1|WP_098951544.1|5122059_5123139_-|polyamine-ABC-transporter-substrate-binding-protein
MKAIALLPLMLVASISQAAETVKIYNWSDYIAPDTTRNFQKDTGIGFTYDVYDSNETLDGKLMTGKSGYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDPGNAHGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAALNYLGLPHHSKKAEDYKKAEALLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPVDAPNEKAGYAFMNYLLRPDVMASITNYVHYANGNAAADSLVDPAIKADTKVYPSTEMMGKLFALEAMPLNIDRVRTRVWNTIRTGR
>NZ_CP023969.1|WP_098951542.1|5121402_5121870_-|M10-family-metallopeptidase-C-terminal-domain-containing-protein
MSSIESLPTGGTWTHPENSPPTLRGTDQRERLEAKRGEPSVLIGGGGADQLVGRQGENTFKYEKSTDSLSDDPDTILNFNPKEDEIDVSGVLKDHNISAINIQSGPPVDVGDVQLTHEFGVSTLNIKVNPEGPNFSVRVDGVNLLPQHINFFHSD
>NZ_CP023969.1|WP_098951540.1|5120614_5121400_+|helix-turn-helix-transcriptional-regulator
MSLFREVGMHAGLGRTLSQIGTERFWKQLVLLLHQCLPFDNALAIFYPLDGPPQALEEYDAQPSSKPASMLVYLNGLYLLDPFYQACREHYASGVYRLEEVAPDHFRQSEYFLNYFHDNVLEDEVQLILQLPGAGTLSLSLGMQRRFSFEEIGLLNTLSAWVLPLMQQHWQQSTQRAPAMDSQIRDALSHFGSGVLSDRELEIARLVLRGFSSKAMAERLKISPDTVKVHRRHLYAKLDISSQPELFSLFIQSLGHDLENP
>NZ_CP023969.1|WP_032897426.1|5119050_5120415_-|APC-family-permease
MSATPAPDGVLKPTLSVFDVVAITVSAVTPASSVFVIAPFAIQQAGSGVFLAFVMAALLALMFAFCYAELGRAHNSAGGEYVYAKRVFGGMAGYATFLTVLVMLLFIPPVLATGAATYLNNALGTQFDAQTVALVIVVCSYALGILNIKLNAWITGTCLLLEVAALLVIVVIGFGNPVQPASVLLQPQIVENGVLHLAPWALVIGAVGIGLFSFNGYGPAVLLAEDMKCGGKGVHKAVLWSLGLVVVIELVPITALLIGAPSLSEMISSPDPIGYLLTSHGNETLSRLVSAGIFLSVFNAIVAIVIQIGRVVFSSGRDALWTPSINKLFTRIHPRWDSPWLATLFLAIPSALLSFSSNLADLTSFSVLLIMLVYLVVALSALMSRVLLRDREHPYRMPLWPLPALLAVLGAGYLLVTLILEASVRDIMIIIGLLALSVILYCISGRLSPAFQKL
>NZ_CP023969.1|WP_098951538.1|5117919_5119041_-|P1-family-peptidase
MRARQLGITLGLGLPGELNAITDVPGVRVGHATLKAQVDGKQVRTGVTLIQPRAGEARYQPCFAGYHVLNGNGDATGLEWISEAGLLTTPMAITNTHSIGVVRDSLIALERERLADPAVYWCMPVVMETYDGLLNDIWGQHVRPEHVRQALEQAESGPVQEGAVGGGTGMICHEFKGGIGTASRRLSAEQGGWTVGVLVQANHGKRQELRVDGYPVGRHLMDIASPFAERGTPGMGSIVVIIATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDLFLAFATGNQDLPPADYGRKDLPLSTGLQMVNNDHISPLFSAAAEAVEEAIINAILAGEDMTTQDGVKVPGLAGETLLAALKQCGWSVPVMGDSAL
>NZ_CP023969.1|WP_003191149.1|5116136_5117570_-|M10-family-metallopeptidase
MSKVKDKAIVSAAQASTAYSQIDSFSHLYDRGGNLTVNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQKINLTATSFSDVGGLVGNVSIAKGVTIENAFGGAGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWGGAGSDTFVYGASSDSKPGAADKIFDFTSGSDKIDLSGITKGAGVTFVNAFTGHAGDAVLSYASGTNLGTLAVDFSGHGVADFLVTTVGQAAASDIVA
>NZ_CP023969.1|WP_098951552.1|5126900_5129363_-|UvrD-helicase-domain-containing-protein
MSQQQPDLPPELRPLAEMPLLKRLAARLFGHGLTRLRAQHRFSWLHGQADGFRSGHEAGVEYGYREGKADGIEEGRQVLLIRDFRPDEHRAPGVDDSLFDDWRLPLTAEVKKRMKADVARLLPAHAQPSAAQWKMIFSDTPSTSVIAGAGAGKSTSLVLRILLLCHYLGFELSSMTVVTFTRESRKDFISKLMEILSLWGQPLGSKEAQAVVRTFHSRILPMVRSLPGFERLQAFENLSGGFEDADTNAFDLRISDAQRQQMNACYHRLYGRHQRFRELIAPLARHGLQLKELERDHPDVQKRMAVTELAAKRDEELCDVIEDLWFRAGAWPIKGIEPSRQTFEINGAQFHCHGYIPELDAWVVLGFDGRENPQISRPNSKLSVRAEWAVKRTLFQAFCNKPLIWLDNYESSRRLLSSLGGDATAGPGFDYKVKGELASAPLLDSFVMAAGFIENLGLDVPTAVGQMSFAKDDPDRLFFEALSIFWKALEDHLLEQSPPIMTYNRMFSLFGENTPENLKLLSDPLLRPMSHLMIDEFQDVSPQIVSWIRASLWEIRSRGPAMHVGRGAQRSSLLCVGDDWQSIYGWRGSSPKYFMEFNKEFVSPSTTRVMLGENYRSHQHIIDAAEHIVRSAPAIPGKKAKASGEPKALVPVTVLERDDAALGQRLLEHYQRGDSILMLYRKSSDKLLIQEHIQSVVNVDSSLAPQARRLKQLTYHSAKGLQADAVFLLGDCQHVTSSPYKNQVYRMAGLGKDGDSEPYDNAQRDEVLRLAYVGITRAVSHCYWYVEKPEGQGVNVPRASERVDGRKVFFDDQRSVKGAG
>NZ_CP023969.1|WP_098951554.1|5129580_5130276_+|pirin-family-protein
MLELRPFTSLGGAHHGWLDAHHHFSFAEYHDPKRMHWGNLRVWNDDIIAPGSGFPQHPHRDMEIITYVREGAISHADNLGNRGRTEAGDVQVMSAGTGIAHSEYNLEATPTKIFQIWIIPNEAGLPPSWGAKPFPQGNREGFVTLASGKAGDSESLRIRADARLVAANLKAGESAEYRLDSGRRAYLVPATGVIDVNGVRAQARDGVAVEDEQVLRVTAIEDSEIVLVDLA
>NZ_CP023969.1|WP_044273695.1|5130390_5132034_-|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MTISPFAGKPAPAQLLVDIPRLVTAYYTGQPDAAISTQRVAFGTSGHRGSSFELSFNEWHVLAISQAICLYREAQGITGPLFVGLDTHALSTPAGASALEVLAANGVHVMLAEGDEYTPTPAISHAIICYNRGRTSGLADGIVITPSHNPPQSGGYKYNPPNGGPADTHVTKWIEAKANELLANKLAGVKRITHAQALKADTTHRHDYLNSYVADLINVIDMDAIRSADLRLGVDPLGGAGVRYWSAIAEHYRLNLDVVNTEVDATFRFMSVDWDGQIRMDPSSSYAMQSLIGLKERFDVAFACDPDHDRHGIVTPSGGLLAPNNYLAVSIDYLFQNRPDWRADAAVGKTVVSSGLIDRVAARIGRRLYEVPVGFKWFADGLFEGSLGFGGEESAGASFLRKDGSVWSTDKDGLIPALLAAEMTSRKGQDPSQIYRGLTDALGEPFAIRVDAKATPAQKALLGKLSPEQVTSTQLAGESIQQILSHAPGNNQAIGGLKVMTENGWFAARPSGTEDIYKIYAESFIGEEHLKQLVEEAQVLVDGAISQ
>NZ_CP023969.1|WP_098951556.1|5132814_5134218_-|PLP-dependent-aminotransferase-family-protein
MNLRGERQVDFAYQAVYRYMINLINEVSRETPVKLPSLRQLSTRMNVSISTIQYAYSLLEKEGRVYSVAKSGYFAWPVVANAPLMAGTDLLERLYTAARRPAMVVLSGDEPALLGSLDGALLALERQLVRRYPHHLQPSQPCGVWELRAALAARYTSSPTRCWQADEVYVGADLQGVLDILIDALGLKGTVVVVESPCDYLVLRLLQAAGVRVIEWPWRADGRPDLAALEHLLRHEPVHLVLLSSVVSMPSGNTMTEPERLHVARLLDQHGCWLLENDTFGDLSFAPPGPALRSLVNPERLIVFSSFEKVLGPEAPFGYLLARQMSSELQRQFLLRSFRLSAIRQRAIARLYESGRFDQHLQTLRQRLHEQAHAMSHRLDVRLQGRVHYRMPVAGASFWLQSTAPVDMRLVFQRMLAQQVVIAPGELFSLSGLHHQHMRLSHTFSGHPNLDIALDTLAQSLRQAQTG
>NZ_CP023969.1|WP_169918352.1|5134254_5135679_-|hypothetical-protein
MSTIHEQAMSYVYQQVLQRLIGHFTRAERTSLQLLVHRIVVAAGGMEQVGNYKVLIAHGGGEVSSYTLALLRAAQLTIAGRSPKTFQIRVATLRHAGMTQATLDSLNQGYAALFFHDDPRVELLMVENHEVLPFNHQRPASSAAREISQRNKLMIGHLTSGDIRAALCDDTLLALGDFYQRVATWNGGVHALVSGDSARKQSQYIAWLKKSALATGLTFAPAKPSSLNAWFARMEEWSVGCYRDLYGEHYAGNESPGRGGHRHLAYIGIADLLKDADVGHAPLLTGFLAHKRDPFEFHFSHPAYPNPLLMAHLHGVQAQCLRELSYEHGVAGFVRRAADFLHRRQVPVALIKEASGREGQLLSTAYIQEFSGLDDNQLTCLLFAPFVQHGERLESFLRQCHPGMLVALPELHKALQGKPAADILHQWLVDTSGLPLPLLQHLYRKRPLLEGRGTRARKRAFARPQARVAQVSGR
>NZ_CP023969.1|WP_032891964.1|5136384_5137407_-|zinc-dependent-alcohol-dehydrogenase-family-protein
MSRTIRFHKFGPAEVLKCEEHAAAQPAPGEVQVRVDAIGISWYDILWRQNLASSHARLPSGLGHEMAGVVVALGDGVDDLAVGDKVASFPAESPNDYPVYGEQIVLPRSALTRYPDVLSPIEASVHYTPLLIAYFAYMDLARVKPGQFALVTDASHCAGPSFVQLGKALGVRVIAATKDSAEREYLLSLGAEKVIVTEEQDLLMQINKFTDNRGVDVVFDGLGGPQMSLLGDVLAPRGSLVLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDQVALQRALRDINQLTADRVLVPLKTTVFPFSQFVEAHRYMDECPCRERVALQVEAV
>NZ_CP023969.1|WP_098951559.1|5139420_5142084_+|ATP-binding-domain-containing-protein
MSSSDALEIANDALDSFHQIEQIASKQLATGSREAFDALAVVNTFTGAAAVEQIASISDDVTKSLASLVREPAVSRIVVENDKGQVETYYICRTTGGFVLNHGKLAGYRSPFGRLAAHGAGEDVDLEIAGKKVSYRVLGKLDLKPQKSAELWDSIDSIWRQERLAPQTIPSLRKVILPDDSNAFFAMLGGKSETEKIREGVRHEIRNAMALRDQAILDKFQDEIFRLSVDHQLIILGPPGTGKTTTLIKRLGQKLDWEALSQDERLLLGPQSKRSRWMMFTPSDLLKHYVKEAFNRENVPASDEHIKTWSKRRHELARSTLGILKTGNGGTCILKEDHQFAPMDINDDPRQWFADFKSLHQSRLLSSLKEGAILLRDSAPNLVDAVVHKLFATVDGLQPEGLQSAYAEWNNLEARIDPMLKASRATSDKLIQQQGNLLHNRNNAVFGEMATFLEVLGQNDDEDEDGTELDDDNGEEGTGTPTHTAELKAFAAYQTFLQTYARTRYRNGNLGKASRAAQIRDWLGDRVPSDEWLKTLGREMCFQNALRRFRNAWRRYVLDVPASYRAFRRDSVTLDRYSYQRPEHASHIDETELDAILLLMLRSARDLIRQDFVKRHIDEPRFTELARISSQFLQQVLVDEATDFSLLQLACMESLTDPAIESFFACGDFNQRITGVGLKHLDQLGWISPRLKPQRINTVYRQSRLLNSFAIKLLEHMDGDTEAVGSLPEHSSHEGVPPVLGENLQGEDVVTWIAERIFEIEDQIRSKNEPVPTIAVLVASEAHVKPVAEALTKKLGSRSLLAVPCVDGQSLGSQSDIRVFDVQHIKGLEFEAVFFIGLDELVEAKPTLFERFLYVGATRAATYLGMVCHQELPSALSNLRPALAQRW
>NZ_CP023969.1|WP_098951560.1|5142226_5142850_+|hypothetical-protein
MALPKLSEQQDVRRVIHHELGHWLMAREVGFKIGGVCVDTYRGKAAGAATVFPKPSNKLVSAQAVEEYLTNRIMVLCAGVIAEIEWYVKNTLNFKTENVNDVYENGVIDTSGLTDKGRIDELMIILTGIRTEPTAIKTEADQTQRNLFIEVYEETRRIFVGFKDKLFALAKLVENEKWTSVTELTVPNNRLIELDEITTASSMETTR
>NZ_CP023969.1|WP_098951562.1|5143895_5144897_+|hypothetical-protein
MLLAACIGLRFHKPSSWLWVDCLYYPLVAVSVWVLFQNNAGERQVIEINEQKTEVELRYSELAKNQPAMSYNVSEDLYRTSLELLTFSSIMNKSCGSFYSPECEAARTINPPIEKFINEIAPHRKEAIEKRIISTCNAAQNLLLEFEKEGELLSSTTNYLIKGFREISQKKLGIGAYGAIPKAQQELEQASLEDLQMLDKAVYSRSNVGQFIKETREAQIRNASSMLQGLLPCMAADMDQLKAVNEWKEKSESTLKIIDRQNIELRAAKSKVDIAFYRFQLYYWPYIIIFALSLKLAKAAAGIRPQINAILILLYDLKKRIFRKSDEADVPAE
>NZ_CP023969.1|WP_032897442.1|5146284_5147220_-|helix-turn-helix-domain-containing-protein
MNPNTQYSTLAVPATRRFDYWKEVVCRHCLAADSKPLSQSRFDGSLTLNTVGALDICTLSSPLHYWERSEQHLRSGPAEDLWLGFARKGHGQIEQGSRKANLATGNLFLYDATQAFRFSLGGTENHLIRIPRALLTERLPRIAEYTAMVLDDRRPGVVPLREMLHQAASTPASLQDERISNRYSSAVLDLLVISLELQDLKASHQEMDLYGRIMQYIQRHLTEPDLSIEAIAKAHNVSTRTVTRAFARYQKTPVAEIWKERLNASREAIERGQVRSVSEAALDFGFSDFSHFSHAFRKAFGVAPNTLLRRD

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Crispr_ID: NZ_CP023969_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_18

5290913-5291009

Orphan

Consensus_repeat	Method
GCAAGCCCGCTCCCACAGTTGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_18

>merge|NZ_CP023969|18|5290913-5291009|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGATCACGGGGTGCCAGGTAGATAGGCGTCGGCTGGCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTGGATC

>NZ_CP023969|18|17|5290913-5291009|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGATC	ACGGGGTGCCAGGTAGATAGGCGTCGGCTGGCAGGCCGTCATCGCAG
GCAAGCCAGCTCCCACAGTTGGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_003190941.1\|5292009_5292531_+\|DUF3455-domain-containing-protein	unknown	unknown	gnl\|CDD\|314761
NZ_CP023969.1\|WP_098951662.1\|5280726_5282208_+\|mannitol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223324
NZ_CP023969.1\|WP_047710734.1\|5293819_5295121_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236724
NZ_CP023969.1\|WP_098951676.1\|5293144_5293819_+\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|227648
NZ_CP023969.1\|WP_003190934.1\|5295124_5295826_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP023969.1\|WP_098951659.1\|5278751_5279582_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP023969.1\|WP_098951669.1\|5287589_5287859_-\|DUF1652-domain-containing-protein	unknown	unknown	gnl\|CDD\|311697
NZ_CP023969.1\|WP_098951660.1\|5279604_5280708_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP023969.1\|WP_138183575.1\|5301667_5302129_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_043051061.1\|5288229_5288430_+\|ParD-like-family-protein	unknown	unknown	gnl\|CDD\|314732
NZ_CP023969.1\|WP_098951667.1\|5284922_5287517_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|377133
NZ_CP023969.1\|WP_003190939.1\|5292617_5293148_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171568
NZ_CP023969.1\|WP_032892067.1\|5300820_5301462_+\|DUF1345-domain-containing-protein	unknown	unknown	gnl\|CDD\|377769
NZ_CP023969.1\|WP_032892065.1\|5295997_5297140_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|169982
NZ_CP023969.1\|WP_098951671.1\|5288429_5289209_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP023969.1\|WP_098951666.1\|5283838_5284777_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_CP023969.1\|WP_003190943.1\|5291030_5291816_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP023969.1\|WP_098951673.1\|5289246_5290371_-\|dimethyl-sulfone-monooxygenase-SfnG	unknown	unknown	gnl\|CDD\|274923
NZ_CP023969.1\|WP_098951664.1\|5282344_5283826_+\|xylulokinase	unknown	unknown	gnl\|CDD\|198375
NZ_CP023969.1\|WP_098951678.1\|5297146_5300245_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_003190941.1\|5292009_5292531_+\|DUF3455-domain-containing-protein	gnl\|CDD\|314761	pfam11937, DUF3455, Protein of unknown function (DUF3455). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 174 to 251 amino acids in length.	2.76153e-42
NZ_CP023969.1\|WP_098951662.1\|5280726_5282208_+\|mannitol-dehydrogenase-family-protein	gnl\|CDD\|223324	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism].	0
NZ_CP023969.1\|WP_047710734.1\|5293819_5295121_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	8.78861e-79
NZ_CP023969.1\|WP_098951676.1\|5293144_5293819_+\|anti-sigma-factor	gnl\|CDD\|227648	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown].	1.94836e-37
NZ_CP023969.1\|WP_003190934.1\|5295124_5295826_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.49664e-87
NZ_CP023969.1\|WP_098951659.1\|5278751_5279582_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.7263e-73
NZ_CP023969.1\|WP_098951669.1\|5287589_5287859_-\|DUF1652-domain-containing-protein	gnl\|CDD\|311697	pfam07865, DUF1652, Protein of unknown function (DUF1652). This is a family containing hypothetical bacterial proteins.	1.07623e-16
NZ_CP023969.1\|WP_098951660.1\|5279604_5280708_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP023969.1\|WP_043051061.1\|5288229_5288430_+\|ParD-like-family-protein	gnl\|CDD\|314732	pfam11903, ParD_like, ParD-like antitoxin of type II bacterial toxin-antitoxin system. ParD-like antitoxin is a family of archaeal and bacterial proteins of a type II bacterial toxin-antitoxin system. Many of the cognate toxins for these molecules fall into family ParE-like_toxin, pfam15781. Gene-pairs are expressed from the same operon, the toxin of the pair being expressed first, eg, for UniProtKB:Q3AQ93 and UniProtKB:Q3AQ94.	5.35561e-27
NZ_CP023969.1\|WP_098951667.1\|5284922_5287517_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	4.93055e-39
NZ_CP023969.1\|WP_003190939.1\|5292617_5293148_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171568	PRK12537, PRK12537, RNA polymerase sigma factor; Provisional.	1.90535e-98
NZ_CP023969.1\|WP_032892067.1\|5300820_5301462_+\|DUF1345-domain-containing-protein	gnl\|CDD\|377769	pfam07077, DUF1345, Protein of unknown function (DUF1345). This family consists of several hypothetical bacterial proteins of around 230 residues in length. The function of this family is unknown.	8.47568e-66
NZ_CP023969.1\|WP_032892065.1\|5295997_5297140_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|169982	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit.	1.60161e-109
NZ_CP023969.1\|WP_098951671.1\|5288429_5289209_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.4901e-143
NZ_CP023969.1\|WP_098951666.1\|5283838_5284777_+\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	1.40958e-98
NZ_CP023969.1\|WP_003190943.1\|5291030_5291816_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.36554e-29
NZ_CP023969.1\|WP_098951673.1\|5289246_5290371_-\|dimethyl-sulfone-monooxygenase-SfnG	gnl\|CDD\|274923	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG. This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_CP023969.1\|WP_098951664.1\|5282344_5283826_+\|xylulokinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_CP023969.1\|WP_098951678.1\|5297146_5300245_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0

>NZ_CP023969.1|WP_098951673.1|5289246_5290371_-|dimethyl-sulfone-monooxygenase-SfnG
MSQQAVKFAYWVPNVSGGLVVSKIEQRTHWGIEYNRKLAQLAEAAGFEYGLTQIRFTAGYGAENQHESVAFSHALLAATTTLKVIAAILPGPWQPALAAKQLATIDQLTNGRIAVNIVSGWFKGEFQAIGEHWLEHDERYRRSEEFIRALKGIWTQDDFTFKGDFYRFNRYTLKPKPLGQPEIFQGGSSRAARDMAARVSDWYFTNGNTPEGVKAQVDDIRAKAAANHHSVKVGVNAFVIARDTEEEARAVLAQIIDQADPEAVNAFGDAARQAGKASPEGEGNWAKSSFEDLVQYNDGFKTNLIGTPQQIAERIVALKAVGVDLVLAGFLHFQEEVEYFGQRVLPLVRELEAKATVGASSLAKNVNEKVGSLV
>NZ_CP023969.1|WP_098951671.1|5288429_5289209_+|type-I-methionyl-aminopeptidase
MIKTPAQLAVMREAGRLLAQVFDMLDGFVAAGRSTLELDSAVEAFIRNDLKARPASLGQYDYPFCINTSINEVVCHGMPSAKQFLKDGDIINIDITLEKGGFIADSSKMYMIGNVTPKARRLVDMTFEAMWAGIRQVKPGARLGDIGHAIQSHAQANGYSVVREYCGHGIGRQMHEEPQILHFGRPGTGLELRQGMVFTIEPMLNQGSAKTRSLKDGWTVVTKDNSLSAQWEHTVAVTADGFEVLTLQTPQTLHTPQTL
>NZ_CP023969.1|WP_043051061.1|5288229_5288430_+|ParD-like-family-protein
MGIVKITDQLHEQLRLASAAMDRSINAQAEFWIKIGLLAELNPHLPYNELINKLLLDKPDLIRGRN
>NZ_CP023969.1|WP_098951669.1|5287589_5287859_-|DUF1652-domain-containing-protein
MLSELELRSIIEGSFLPKRCECTKAQDASLTIRVYDERDRDRVDLEVKGINADKLDSSRAICNLITGLREDLRHHHAPVLQRAGGRGYH
>NZ_CP023969.1|WP_098951667.1|5284922_5287517_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MQKPSGFSTRAVLAVGLISLQYMTPQPSHAACVLTPGTGNDTYTCDNGSSPGLTDLSGDNSLTLSKGGTIDGNVTFGAGMDRTQILDGVVTGVVQQGPGIDDFLMKGGQIQALFQGDGLDTFEMSGGTIVDAFEDGDVAYQSGGSIGRVNMKLDKNFYYMSGGTIVNNLVTGFDIDTIDISGGTIGGNISTSGGDDSITVRGGVINGEIRASVGNDTFQWLGGGQINSAVLMGDGDDTALLQGLSESTLTHTPSIDAGLGNDQLTFDTTTSSTASRYVGWETVNLTNKSRLDLVGNFFFGDSDSKTGIFNIDGSSTLAVTQGSIRPYTAGQRVTFNNAGTVDMTADNSATSVLTVHGNYVGNNGQLHLQTVLGDENSATDKLVVTDGSISGHTQLAVSNLGGIGGLTRNDGIEVVQALNGAVSSPDAFALNGTVSAGAYQYFLFHGGTTAGKEHNWYLRSSVVAVQPPAVVTPTPPVTPAVPVAPIPANPPVVDPDEPPVEPPTAQPVAPVEPPAPAPNQVAAAHSPQSAASNPPLPTAIPGAKPIPLYRPEVPIYSVDIPAAQVMTLQALGTFHERQGEQSLLTETGAVPAGWGRAYGSDFNKSWSGTVAPSFDGTSRGYQVGHDLYAAQTSGGQTQRFGLFIGQSRLRGDVKGFALGWQNHRSGRVKLDGDNVGAYWTLTDPTGWYVDLVAMGTRLDGDNKSDRGVKMGTKGHALALSAEAGYPITLSEHWVVEPQAQVIGQKIDLDSQHDGISKVSFDSQEYWTGRLGARLKGRYLVSNTPVEPYLRANVWHTFGGSDTVTYDEVDRIKSDHKSSTADIGVGAVAQLSSAVSAYVEGKYGTGLDDNNFEGASGSIGVRVSW
>NZ_CP023969.1|WP_098951666.1|5283838_5284777_+|carbohydrate-kinase
MYLVCGEALFDFFSEEDASGQAAKLNYKAIAGGSPFNVAVGLRRLGIESAFFAGLSTDYLGRRLQQVLKDEGISEGFLVEFDAPTTLAMVAVGANGSPQYSFRGEGCADRQLQLTHLPPLGDEIRGLHVGSFSLVVQPVGDTLLNLVKRESGKRLISLDPNVRLNPQPDIHLWRARVAELVQHADLIKVSDEDLHLLYPDQAPESVLQGWLQHRCQLVFLTRGGDGASVFSRQHGTWSQPAVKVVMADTVGAGDTFQAALIAWLTEQQLDSVEGLQNLSREQIDAMLGFAIRAAALTCGKTGPDLPYRHQLG
>NZ_CP023969.1|WP_098951664.1|5282344_5283826_+|xylulokinase
MTQQNLYLGIDCGTQGTKAIVIDASSGKVLGLGAAAHSLISGANGRREQHTQEWLDAFTAATHRALQQAGVDGQDILGIGVSGQQHGLVLLDEQGEVLRPAKLWCDTETTPENDRLLQHLDGERGSLERLGVAIAPGYTVSKLLWTREQHPDVFARIAHILLPHDYLNYWLTGRACAEYGDASGTGYFNVRRREWDVALLQHIDPSGRLQAALPTLIEADQAVGTILPAIAERLGINPNAVVSSGGGDNMMGAIGTGNIAPGVITMSLGSSGTVYAFADQPNVSPQASVATFCSSSGGWLPLICTMNLTNATGVIRELFELDLDAFNALVEQAPIGADGVSMLPFLNGERVPALPHATGSLQGLTMTNLTRANLCRAVVEGTTFGLRYGLDLLRQTGLQSQSIRLIGGGSKSPLWRQMVADIMHTEVVCTEQSEAAALGAAIQAAWCQSGESLASLCDKCVSVDPASRTLPVAANVSAYQQAYERYQQHVATL
>NZ_CP023969.1|WP_098951662.1|5280726_5282208_+|mannitol-dehydrogenase-family-protein
MKLNKANLTQLAPEVQVPTYALADTRQGIAHIGVGGFHRAHQAFYTDALMNTGEGLDWGICGVGLRSEDRKARDDLAGQDYLFTLYELGDTDDTQVRVIGSISDMLLAEDGAQALIDKLASPQIRIVSLTITEGGYCIDDSNGEFMAHLPQIQHDLAHPRAPKTVFGFICAALTQRRAAGTPAFTVMSCDNLPHNGAVTRKALLAFAALHDAGLHDWIEANVSFPNAMVDRITPMTSTAHRLQLHDQHGIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIGLLNGSHLALTYLGFLKGYRFVHETMNDPVFVAYMRAYMDLDVTPNLAPVPGIDLTEYKQTLVERFSNQAIADQLERVCSDGSSKFPKFTVPTINRLIADGRETERAALVVAAWALYLKGVDESGVSYSIPDPRAAFCQDLVSDDTLISQRLLGVEEIFGTAIPKSTAFVAAFERCYASLRDKGVTATLQNLLNKPD
>NZ_CP023969.1|WP_098951660.1|5279604_5280708_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MANLKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSDGTIELDGRDITEVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKKLVESKVSEAARILELGPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLHKELQATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFLGTPKMGFLKGQVTRVDGQGCEVQLDAGTLISLPLSGATLSVGSAVTLGIRPEHLEIATPGQTTLTVTADVGERLGSDTFCHVITRNGEPLTMRIRGDMASQYGETLQLHLDPAHCHLFDTDGVAVARPLRAAA
>NZ_CP023969.1|WP_098951659.1|5278751_5279582_+|carbohydrate-ABC-transporter-permease
MTLQQSRRLQSLLLGTLAWVIAILIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSNYFAYAWNSVVISFSATALCLLISVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLDTRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGATLWQEMVRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSSAAPLTALIASYSSPEGLFWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
>NZ_CP023969.1|WP_003190943.1|5291030_5291816_-|sulfite-exporter-TauE/SafE-family-protein
MDVGNIGFVVAGLIVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVLVHSKNKNIDWTITGWLTLGSVPAVLLTLWFLASLHTDPSAMNAVIKQALGVVLLLTALAILFKKSLLAFAQRHAGDSYHLRPRNLNVLTVVTGAILGTMVALTSIGAGALGTVALFILYPFLATRRLVGTEIAHAVPLTLVAGLGHASMGNMDWHLLGFLLMGSLPGIYVGSHMTGKIPDGVLRPCLAVMLMAVGYKLAF
>NZ_CP023969.1|WP_003190941.1|5292009_5292531_+|DUF3455-domain-containing-protein
MNAKTLLCLTGLLIAAPSAFAQAGLPDSIKVPDGHKLAMQTTGVGEITYECRDKANAAGQTEWTFVGPKAVLNDRNGQQVGTYFGPPATWQAKDGSTITGTQLAVAPSSPGNLPYQLVKANPAEGKGAMSGVTYIQRVALKGGVAPATPCTTANKGAKEVVKYQADYLFWAAN
>NZ_CP023969.1|WP_003190939.1|5292617_5293148_+|sigma-70-family-RNA-polymerase-sigma-factor
MAEIIFDYEVCLLACARGDQRALHQLYEQDSSRLLGVALRITRNKALAEDIVHDAFIKIWHGARSFDPLRGSARGWVFSVTRHLALDVVRSAGRDVPLDDQYEPLAEPAQAIEFAARSGQIHQCLERLDPTRRTCILHAYVDGYSHSEIAQKLSTPLGTVKAWIKRSLAALRECMA
>NZ_CP023969.1|WP_098951676.1|5293144_5293819_+|anti-sigma-factor
MNDSLDELASEYVLGTLPAEQRAEVQQRLAHDAPLRAAVDAWEQRLLPLVALAQPVPPSAQLWRRIERRIKAPETSVPWWNLLAFWRGLSAAGLMASVVLAALLLTRPPLPAPSFVVVLMAPQSQAPGWVVQASDNQQIQLIPLGVMEIPADKALEFWTKGDGWQGPVSLGLVKPGQTLSIPLDKLPPLAPNQLFELTLEGPNGSPTGKPTGPIHGIGRAVKVL
>NZ_CP023969.1|WP_047710734.1|5293819_5295121_-|two-component-sensor-histidine-kinase
MFRVLLRLYLITIVTYSAAIYLIPKLVIQLFEHRYMDYNIEQSRGLQKLMVKQYQRAPVERWSQVTDQLSHDFAPLKVQLLLRQDARYTPEEEQLLEQGKPVIRLGEWGWMEEISSPINQQFAVKLTVPPDPLDMNLLYWSMNVLVGAALLACLLVWLRPHWRDLERLKSTAALLGKGHLEARTGLAPSSSIGGLAAVFDTMADDIERLLNQQRDLLNAVSHELRTPLTRLDFGLALALSEDMPAASRERLQSLVAHIRELDELVLELLSYSRLQNPAQLPERVEVALDEFIDSVLGSVDDELENPDIVIDVVLDCAVERFSLDPRLTARALQNLLRNATRYCDKRIQVGVRVCPKGCEIWVDDDGIGIPADQRERIFEPFYRLDRSRDRATGGFGLGLAISRRALEAQGGTLTALASPLGGARFRVWLPNLS
>NZ_CP023969.1|WP_003190934.1|5295124_5295826_-|response-regulator-transcription-factor
MPNILLVEDDAALSELIASYLERNGYHVSVLSRGDHVRERARLNPPDLVILDLMLPGLDGLQVCRLLRADSAGLPILMLTARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVRTLLRRSSLSEPQVASDQIVMGNLCIDLSERTVTWREQAVELSSGEYNLLVVLARHAGEVLSRDQILQRLRGIEFNGTDRSVDVAISKLRRKFDDHAGEARKIKTVWGKGYLFSRSEWEC
>NZ_CP023969.1|WP_032892065.1|5295997_5297140_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSKNLFAPFCLLALTLALSACGQSADEAPQMPLAKVRIETLQAKPLSITSELSGRIAAPRIAEVRARVAGVVMQRVFNEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEANAFQARLQEQRYSQLVEGNAISGQEYDNARAALRQTNAEVAANKAAVERAKLNLGYATVTAPISGRIGRALVTEGALVGQNEATPLAIIQQLDPIHADLTQSTRELNDLRRAFRAGSLKQVGQDQAKATLIQDDGSQYPLPGKLLFADISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRVEQAVDKQGLSVPQRAITRDSAGIPMVLLLDAEQTVSQQPVELGAVVDNRWIVTSGLKPGDRIIVEGLQHARPGEKVEVDDSPLVKE
>NZ_CP023969.1|WP_098951678.1|5297146_5300245_+|efflux-RND-transporter-permease-subunit
MPQFFIDRPIFAWVVALFILLAGALAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDESVVSLIEQELNGADHLLYFESQSSLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQAVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAERAMRIWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTHTQEITAAVLVKGQLSTPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANALSTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQNVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMATEGLSPKDATKKAMGQITGAIIGITLVLVAVFLPMAFMPGSVGVIYQQFSLSMATSILFSAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNQRFDQLTNRYEGWVAYALKRSGRYLLIYLVLLVGMGLLFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAEEPGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERGSDDSASSIADRANMAFSELKDAIAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAGLMAARTELLDAAAKSPILANVRESALAEAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVADLMKIHVRNNAGKMVPLSAFVQAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMNEIQRLVSQLPAGLGQEWTGLSLQERLSGSQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLVVPLGVLGAVLAVSLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLIDATLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVVFVPVFFVVVMKLVRKRHKPD
>NZ_CP023969.1|WP_032892067.1|5300820_5301462_+|DUF1345-domain-containing-protein
MPFLARTHPRLSSAAVLGLAVGALVPAETLASKILIGWNVGVWTYLVLMLWLTIRAKAPDVKRIAEIEDENAGLVLFMVCIAAIASLATITFELVGSKDLATSERLLHYGFTGLTVIGSWLLIGVIFSVHYARLYYTWDGKEPALRFAEGLTTPNYWDFLYFSFTISVAVQTSDVGVATRSMRKVVLGQSLIGFLFNTAILGFSINIAAGLFG
>NZ_CP023969.1|WP_138183575.1|5301667_5302129_+|hypothetical-protein
MPAPTATPTSHQQSVLFPRALEAEGTFSVFLDGQSIEIKTINIVNDPFQRILGITGRNTEGQDTVREIYIQFADHTPAGTTFNLAQSEFTSTRIWLSVKTPDKPYAVRGIVGTLSIQKIFPHLIKVQGAAVATTDTDANGQIHDLIINFDIHT

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Crispr_ID: NZ_CP023969_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_19

5346963-5347066

Orphan

Consensus_repeat	Method
CCCCACGATCCAACTGTGGGAGCTGGCTTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_19

>merge|NZ_CP023969|19|5346963-5347066|CRISPRCasFinder
CCCCACGATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACGGCCTGATAGCCGCCCCATATCTACCTGACACCCCCACGATCCAACTGTGGGAGCGGGCTTGC

>NZ_CP023969|19|18|5346963-5347066|CRISPRCasFinder
CCCCACGATCCAACTGTGGGAGCTGGCTTGC	CTGCGATGACGGCCTGATAGCCGCCCCATATCTACCTGACAC
CCCCACGATCCAACTGTGGGAGCGGGCTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_003190886.1\|5336650_5337973_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP023969.1\|WP_032892094.1\|5340985_5341969_-\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_CP023969.1\|WP_032892102.1\|5351914_5352838_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377694
NZ_CP023969.1\|WP_098951714.1\|5354020_5355211_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023969.1\|WP_032892092.1\|5338644_5339469_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP023969.1\|WP_098951712.1\|5353001_5354024_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP023969.1\|WP_032892097.1\|5345704_5346811_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NZ_CP023969.1\|WP_098951716.1\|5355203_5356025_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP023969.1\|WP_032892091.1\|5338317_5338578_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_003190877.1\|5344733_5344946_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951705.1\|5339465_5340989_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237233
NZ_CP023969.1\|WP_098951718.1\|5357461_5358466_-\|inositol-2-dehydrogenase	unknown	unknown	gnl\|CDD\|275173
NZ_CP023969.1\|WP_032892096.1\|5345047_5345539_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023969.1\|WP_003190861.1\|5356127_5357339_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
NZ_CP023969.1\|WP_098951709.1\|5347475_5348879_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP023969.1\|WP_098951711.1\|5349022_5349553_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP023969.1\|WP_153475996.1\|5342228_5342405_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179699
NZ_CP023969.1\|WP_098951707.1\|5342562_5344305_+\|phosphoethanolamine-transferase-CptA	unknown	unknown	gnl\|CDD\|333729
NZ_CP023969.1\|WP_032892100.1\|5349877_5351380_+\|glycine-betaine/L-proline-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
NZ_CP023969.1\|WP_032892101.1\|5351433_5351940_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|376570

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951714.1\|5354020_5355211_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	8.57009e-93
NZ_CP023969.1\|WP_032892094.1\|5340985_5341969_-\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP023969.1\|WP_032892102.1\|5351914_5352838_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|377694	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus. This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain.	2.39387e-59
NZ_CP023969.1\|WP_032892100.1\|5349877_5351380_+\|glycine-betaine/L-proline-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
NZ_CP023969.1\|WP_098951712.1\|5353001_5354024_+\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	1.17185e-38
NZ_CP023969.1\|WP_032892097.1\|5345704_5346811_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	1.09356e-140
NZ_CP023969.1\|WP_098951716.1\|5355203_5356025_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.37563e-34
NZ_CP023969.1\|WP_003190886.1\|5336650_5337973_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	4.63008e-163
NZ_CP023969.1\|WP_032892092.1\|5338644_5339469_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.98243e-70
NZ_CP023969.1\|WP_098951705.1\|5339465_5340989_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|237233	PRK12853, PRK12853, glucose-6-phosphate dehydrogenase.	0
NZ_CP023969.1\|WP_098951718.1\|5357461_5358466_-\|inositol-2-dehydrogenase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	5.26284e-147
NZ_CP023969.1\|WP_032892096.1\|5345047_5345539_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.14666e-16
NZ_CP023969.1\|WP_003190861.1\|5356127_5357339_+\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.51712e-104
NZ_CP023969.1\|WP_098951709.1\|5347475_5348879_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.43513e-71
NZ_CP023969.1\|WP_098951711.1\|5349022_5349553_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.85232e-32
NZ_CP023969.1\|WP_153475996.1\|5342228_5342405_+\|hypothetical-protein	gnl\|CDD\|179699	PRK03992, PRK03992, proteasome-activating nucleotidase; Provisional.	0.00751987
NZ_CP023969.1\|WP_098951707.1\|5342562_5344305_+\|phosphoethanolamine-transferase-CptA	gnl\|CDD\|333729	NF012179, CptA, phosphoethanolamine transferase CptA.	0
NZ_CP023969.1\|WP_032892101.1\|5351433_5351940_+\|GAF-domain-containing-protein	gnl\|CDD\|376570	pfam01590, GAF, GAF domain. This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyze ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalyzed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyzes the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54.	1.023e-05

>NZ_CP023969.1|WP_032892097.1|5345704_5346811_-|cell-division-protein-ZapE
MTFDSPLAAYQHAITQPGFVADDAQRRAVQALQACHEALHQGRSPIAGVYLWGPVGRGKTWLMDQFYQSLRVPARRQHFHHFMAWVHQRLFQLTGTQDPLQALARELSQAVRVLCFDELFVNDIGDAIILGRLFQVMFEEGVVMVCTSNQPPDQLYADGFNRERFLPGIDALKQHMQVVAVDGGEDHRLHPGVGMQRYWVNQPEALAAVFQQLSQGQTVTSGAVNVGHRTIMTVQASDTVLWCRYADLCEQPLAAMDFMLLCDRFRAILLGDVPNLSAQKRPGRIARGTEDGAERVVAGDRELPQLSVHDDSVRRFIALVDECYDRKVPLFIEARVPLQHLYTDGYLEFPFRRTLSRLQEMQLQRFAT
>NZ_CP023969.1|WP_032892096.1|5345047_5345539_-|GNAT-family-N-acetyltransferase
MDTPDILVLQASYTNAVHADAIGLLLNHYAEDPMGGGHSLPADLLQQLPAELAKRPHAFSVLAFVGGEPAGLVNCFEGFSTFACRPLVNVHDVVVKEQFRGLGLSQKMLQKVEEIARQRGCCKITLEVLEGNELAQSAYRKFGFDDSVFDPAHGRMLFWHKPL
>NZ_CP023969.1|WP_003190877.1|5344733_5344946_+|hypothetical-protein
MKLSTLMLASLMTLTSAAAFAEGGAERSKEFYNNFSFIQEKTHGKAEQQVASADGKSVKSETVDQTQPNS
>NZ_CP023969.1|WP_098951707.1|5342562_5344305_+|phosphoethanolamine-transferase-CptA
MAMFKRSTTTAKGFDWAGLGWLFLFFWYFSGITQLLIQLTGTSGFSGFRQAFFMSALWLAPMLLFPRRTRLLAALIGVVLWACSMASLGYFFIYQQEFSQSVIFIMFESNISEAGEYATQYFAWWIVLAFIAHTAFAIFLWTRLRPVYLPRGQSIVAAIAIVLAVVGYPLVKQIATSETMELAIDRFETRIEPAVPWQMIVAYRRYTEQLDNMQGMLTSASKIPPLNNLKDSMAGQPSTLVLVIGESTNRQRMSLYGYPRNTTPELDKLRDQLAVFDNVITPRPYTIEALQQVLTFADEENPDLYLKTPSIVSVMKQAGYKTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNARQYDGDVLAPFSKALADTAERKFIVVHLLGTHMSYQYRYPQTFDKFTDRQGVPAGVSDAQLPTYNSYDNAVLYNDFVVSSLIKDYAKTDPNGFLLYLSDHGEDVFDSAGHDTLGRNEGKPTAPMYTIPFMAYASPKWRESHDWSFAGDLQRPYSSSQLIHTWADMAGLSFDELDHTKSLVSDSFKPRPLLIGNPYETKQKALIDFSLIKPKKADGAEVVAK
>NZ_CP023969.1|WP_153475996.1|5342228_5342405_+|hypothetical-protein
MSTAQMTRPPQTLYVTIRRDELRQLKDERDQLQQEVLRLRSHLQAHLDQPSDAKPALC
>NZ_CP023969.1|WP_032892094.1|5340985_5341969_-|decarboxylating-6-phosphogluconate-dehydrogenase
MQLGIIGLGRMGGNIARRLMLNGHTTVVYDRNEAFVKALSEEGATGVADLKALVAGLQKPRAVWVMLPAGAPTEDTINVLSELLEDGDVIIDGGNTNYKDDVRRGKALAEKGLHYVDVGTSGGVWGLERGYCMMIGGDTETVNRLDPIFKSLAPGLGNIPRTKDRSASADPRAEQGYIHAGPAGSGHFVKMIHNGIEYGMMQAFAEGFDILKTKNSENLPEDQRFDLNVADIAEVWRRGSVVSSWLLDLTADALATDPKLDGYSGSVADSGEGRWTIEAAMEQAVPVPVLSTSLFARFRSRQQSTYGDKMLSAMRFGFGGHVETSKK
>NZ_CP023969.1|WP_098951705.1|5339465_5340989_-|glucose-6-phosphate-dehydrogenase
MTANGKKPKAEPAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLLGDGLRIVGVDHNAISDADFAKKLEDFIRTEASSKVRGNAENALDPALWAQLAKGISYVEGDFLDDSTYADIASKIADSGTGNAVFYLATAPRFFSEVVQRLGSAGLLNETEDGFRRVVIEKPFGSDLATAEALNACLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNVLFEAFWNNHYIDHVQITAAETVGVETRGNFFEKTGTLRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSLEDARANSVRGQYTAGEIAGKPLPGYREEANVAPDSSTETFVALKVMIDNWRWVGVPFYLRTGKRMSIRDTEIVICFKQAPYAQFRDTEVDELKPTYLKIQIQPNEGMWFDLLAKQPGPTLEMANIELGFDYKDFFEMQPSTGYETLIYDCMTGDQTLFQRADNIENGWRAVQPFLDAWKQDDGIQAYKAGEDGPAAADALLARDGRAWHSLG
>NZ_CP023969.1|WP_032892092.1|5338644_5339469_-|Cof-type-HAD-IIB-family-hydrolase
MSDATIQPIRFVLSDVDGTLLHPDHSLSQRTADAIRAMREAGVLFSLASGRPPKAMRHLIETFGIDVPVAGFNGGTLVNPDGSILVAHHLPAEAALITLALFSAEPDVEVWVFADGDWLRRDPPGPMVQREADGLGYGPVVVESFEPYLDRVDKIVAASNNTQLLVELEAQLQPKVQGLAQVSRSQPVYLDVTAMLANKGEALKTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAEETVKRQANVVTGSNVEDGAAEAFERFILTAR
>NZ_CP023969.1|WP_032892091.1|5338317_5338578_+|hypothetical-protein
MNAPLRINEALLIADRAFQPFQCVAWHDGVGALSLSVIDRTNTRIGSKQLSSTAYTDPAQLENLLLQARAELDKEGHQLQHWAMPK
>NZ_CP023969.1|WP_003190886.1|5336650_5337973_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MIATPPQRRLLVVDPCDDCHGLLPGLRTAGWEVDSCALEAVGERSCDVGLLRLQRDHLERPEAVKELIGRSGTEWIAVLSQDVLRLQNVGDFVCEWFFDFHTLPFDVSRVQVTLGRAFGMARLRGKGYAPVDEPHELLGESRPIRELRKLLSKLAPTESPVLIRGDSGTGKELVAKTLHRQSQRHAKPFVAINCGAIPEHLIQSELFGHEKGAFTGAHQRKIGRIEAANGGTLFLDEIGDLPMELQANLLRFLQEKHIERVGGSQPIPVDVRVLAATHVNLEAAVEKGAFREDLYYRLNVLQVVTAPLRERHGDVAMLANHFSRFYSQETGRRPRSFSEEALVAMGQHPWPGNVRELANRVRRGLVLAEGRQIEAVDLGLQGQQVISAPMATLEDYKHRAERQALCDVLNRHSDNLSVAARVLGISRPTFYRLLHKHQIR
>NZ_CP023969.1|WP_098951709.1|5347475_5348879_-|MFS-transporter
MNLNEPISALRVGQAVGSYRWTICAMLFFATTVNYLDRQVLSLLAPQLSTQFGWSNTDYANIAAVFQFVYAISMLFAGRFVDKIGTKAAYVVAIGIWSTGAIMHAFAVPMGEGIAAVNGAIGLAVIPVSIAGFMLSRAVLAIGEAGNFPIAIKATAEYFPKKERSLATGIFNSGANVGAILAPICVPLIAGMWGWEAAFMVIGMLGFVWVAVWAAVYQKPEQQKRLSPEELAYIRSDQTVQPFTPAPTGTAVKKVSWFKLLTYRQTWAFAFGKFMTDGVWWFFLFWLPTYLSAQYGMKGADIVMPLAVLYSMTMVGSIGGGWFPSYFMARGDAPYDGRMKAMLVIALFPLVVLLAQPLGYLSFWVPVLLIGVGASAHQAWSCNIFTTVSDMFPQKTVASVVGIGGMAGGLGGVLMTKVGGWVFDYYKSINDIHTGYMIMFAICALAYLVAWSVMKTLVPRHKEITDL
>NZ_CP023969.1|WP_098951711.1|5349022_5349553_-|GNAT-family-N-acetyltransferase
MPSSHSRLTYRQPQAADLQRLFAIFGDPQTHLFNPAGPLPNLAAAQRLLDHWLEQWASQGYGWWAIARKESPEHIIGFGGIAPLNYLTQRRINLGYRLAVEAWGQGYATELGRDALALAFDTLSLPEVFGLVRPDHAASIRVLEKLGMQRFGLLDDVPGQAPSLVLRVCHPTTAQA
>NZ_CP023969.1|WP_032892100.1|5349877_5351380_+|glycine-betaine/L-proline-transporter-ProP
MKLRKKRVKPIGLKDITIVDDNKMRKAITAAALGNAMEWFDFGVYGFVAYVLGKVFFPDASPSVQMIAALATFSVPFLIRPLGGLFFGALGDKYGRQKVLAATIVIMSLSTFAIGLIPGYASIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVVLISTVLGEAEFEAWGWRLPFFLALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLSHGPKVSFKEIATKHWRSLLTCIGIVAATNVTYYMLLTYMPSYLSHNLHYAENSGVLIIIAIMVGMLFVQPFIGFVSDKIGRKPFIIAGSIGLLFLSIPAFMLITSGKTGLIFGGLLILAVVLNFFIGVMASTLPAMFPTHLRYSALASAFNVSVLIAGVTPTAVAWLVESTNNLYMPAYYLMVFAVVGLITGLTMKETANKPLRGAAPAASDMEEAKELLQEHHDNIEQKIEDIDAEIAALQTKRENLVQQHPRIN
>NZ_CP023969.1|WP_032892101.1|5351433_5351940_+|GAF-domain-containing-protein
MVSSVTAAHRLLSADERAAIAEIEATTNILKLVTRLTGMRFAGIAKFTDQEWVVCSAYDPLQMGINVDDVLDLETTLCSEFCINPHTLFIPQISQNGRFAARPVVKQYAIESYAGAPIFLPDGRLFGALCALDSRAMLFDDPNLPETLSLFARLIGCIFYANLTPADH
>NZ_CP023969.1|WP_032892102.1|5351914_5352838_-|AraC-family-transcriptional-regulator
MTSTPTPLNALIQSIGSRTPSPGDYAMPIPGLGFYRREQPAAPVVCMVEPCIVLVAQGEKQLWVGGEGYPYDTSRFLVTSLDIPANSEVLAASPEQPCLGLTFKLDLRMLTELIAQGGLPPVRERAVMKGVGIGTVTDGMLAAFARLVALLDEPEAIPVLAPLIQREIHYRLLKSDQAGRLRQICSVDGQGYRIAKAIDWLKLNFDAALRVEELAARVQMSAATFHHHFRQLTAMSPLQYQKWLRLNEARRLMLNEHQDVSSAAFKVGYESPSQFSREYSRLFGVPPKRDMATLRGRAGVSDLPGSN
>NZ_CP023969.1|WP_098951712.1|5353001_5354024_+|alpha/beta-hydrolase
MKRLLLALGLLVTSLSSFGADMSNGADNFYSSNTVTAEPVTFNNQYGMQVAGTLFVPKHLAPGSKHAALVVGHPMGAVKEQSANLYATKMAEQGFVTLSLDLSFWGQSAGTPRNAVLPDLYVEDFSAAVDFLGTRPQVDRERIGAIGICGSGSFVISAAKIDPRLKAIATVSMYDMGAANRNGLKHGMTLQQRQQILRQAANQRYVEFQGGETLYTGGTPHSLTGDPIGDEFYDFYRTPRGEVTPAGASSQTTTRPTLTSNVKFMNFYPFNDIETISPRPLLLITGADAHSREFSEDAYQRAAEPKQLLIIPNAGHVDLYDRVELIPFDTLTTFFQSHLQ
>NZ_CP023969.1|WP_098951714.1|5354020_5355211_+|MFS-transporter
MSSVTPQPQRWGAVLAMSLAAFALVASEFMPVSLLTPLAADLQITEGQAGQGISVSGVFALLTSLVIAAVAARMDRKRLLMALTLLMIVSGSVVAFAPNYAVFMLGRALIGVAIGGFWSLSAATAMRLVEPAQVPRALAIVNGGNALATVIAAPLGSFLGGLIGWRGAFFCVVPVAVIALAWLWLSLPALKHSGAANTGNALRLLKSPKVALGMCAVSLFFMGQFMLFTYLRPFLEGVTRVEVTTLSLMLLVLGLAGLAGTVLIEHLLKRHLYPTLIAIPLIMAGIALALVAFGGSAIATTVLLGCWGLVATAAPVGWWTWLARALPDDAEAGGGLMVAIIQLAIAAGATVGGVAFDLSGYQATFELSAALLVIATLLAYLASRRTAHARMASSTT
>NZ_CP023969.1|WP_098951716.1|5355203_5356025_-|helix-turn-helix-transcriptional-regulator
MPVSRNSGRNHRKKGEMIKSLDKFLREIDEGDWAVISSATDYPEDWVIPEHSHNKHQLLYAIGGVMVVYSALRQWTVPPNRGFWMPCGQVHSLRCVGTLQMRSVFVRPDSFPNLPAEPKTVTVSPLLSELIKASVSLKPPYAEDSRDARIMHLILDELAILPALPLSLPQPADPRLSPICLALQDEPSDASTVADWSARLGLDQTTIQRLFRKETGMTFGQWRQQARLLLALERIAVGQKIIDVAFELGYESPSAFTSMFKKQFGKTPSHFFK
>NZ_CP023969.1|WP_003190861.1|5356127_5357339_+|MFS-transporter
MSTVTASPAAPSTSPQVSPLVMRVLGACALAHLINDLIQAVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWIGYHTDRHPKPWLLPAGMVCTLIGILMLAFVGNFPAILLAAALVGVGSSTFHPETSRVARLASGGRYGLAQSTFQVGGNTGSAFGPLLAAAIIIPYGQSHIAWFGLFAVFAILVLYGLSRWYRHHLNLFKLKQGSQATHGLSKGRVTFALVVLAVLVFSKYWYMTSLTSYFTFYLIEKFQLSVASSQMYLFLFLGAVAVGTFAGGPIGDKIGRKKVIWFSILGAAPFTLALPYVDLFWTAVLSVVIGFIIASAFSAIVVFAQELVPGNVGMIAGIFFGLMFGFSGIGAALLGMLADHHGIEYVYKLCSFLPLVGILTVLLPSTKGV
>NZ_CP023969.1|WP_098951718.1|5357461_5358466_-|inositol-2-dehydrogenase
MLRIAVLGAGRIAKIHAANVAAHPNATLVLVADPWRAGVDALSTQLGCEAAYDCATVLSREDIDAVVIGTPTDTHIDLLLAAVAQGKAVLCEKPIDLDIAKARSAAQTVERQGGKVMLGFNRRFDPDMLRLRQALDAGQIGAVRQVIITSRDPGLAPRDYLEHSGGILRDMTIHDFDTARHLLGEEPVEVSAFASRLVDPTLEQIDDYDSVMVLLRTASGKQCHINCCRQAVYGYDQRVEVSGASGVLLTDNHRPSTVRHWSAEHTEALEPLQNFFLERYADAYRNELTQFIDALNEGRELPTSMRDGLYALHLADCALESVKTGRSVRVSHNL

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Crispr_ID: NZ_CP023969_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_20

5409647-5409750

Orphan

Consensus_repeat	Method
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_20

>merge|NZ_CP023969|20|5409647-5409750|CRISPRCasFinder
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACATTTGGACTGCGGCGCGTCAGCTAGATCAGCGTCGGCTGTCAGGCCGCCATCGCAGGCAAGCCAGCTCCCACA

>NZ_CP023969|20|19|5409647-5409750|CRISPRCasFinder
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACA	TTTGGACTGCGGCGCGTCAGCTAGATCAGCGTCGGCTGTC
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_032892149.1\|5420699_5420996_-\|DUF5629-family-protein	unknown	unknown	gnl\|CDD\|376055
NZ_CP023969.1\|WP_098951751.1\|5407494_5409135_+\|protein-BatD	unknown	unknown	gnl\|CDD\|379280
NZ_CP023969.1\|WP_032892136.1\|5403257_5404190_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP023969.1\|WP_098951759.1\|5417999_5418593_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198305
NZ_CP023969.1\|WP_014718317.1\|5394497_5395199_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP023969.1\|WP_032892132.1\|5396125_5400994_-\|NAD-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|377452
NZ_CP023969.1\|WP_098951762.1\|5421281_5426285_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234801
NZ_CP023969.1\|WP_098951747.1\|5404673_5405762_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238744
NZ_CP023969.1\|WP_098951760.1\|5419537_5420713_-\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP023969.1\|WP_032892142.1\|5410662_5410902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892134.1\|5402292_5403252_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP023969.1\|WP_169918595.1\|5409787_5410258_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892147.1\|5419201_5419381_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_056784594.1\|5404186_5404681_+\|DUF4381-domain-containing-protein	unknown	unknown	gnl\|CDD\|379552
NZ_CP023969.1\|WP_098951757.1\|5414364_5418003_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|182330
NZ_CP023969.1\|WP_034135431.1\|5401476_5401830_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892143.1\|5411062_5413036_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372638
NZ_CP023969.1\|WP_098951745.1\|5395215_5395902_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP023969.1\|WP_098951755.1\|5413126_5414368_+\|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|182871
NZ_CP023969.1\|WP_098951749.1\|5405758_5407498_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_032892149.1\|5420699_5420996_-\|DUF5629-family-protein	gnl\|CDD\|376055	pfam18629, DUF5629, Family of unknown function (DUF5629). This is a domain of unknown function found in hypothetical proteins from Pseudomonas aeruginosa.	6.3956e-19
NZ_CP023969.1\|WP_098951751.1\|5407494_5409135_+\|protein-BatD	gnl\|CDD\|379280	pfam13584, BatD, Oxygen tolerance. This family of proteins carries up to three membrane spanning regions and is involved in tolerance to oxygen in in Bacteroides spp.	1.91734e-104
NZ_CP023969.1\|WP_032892136.1\|5403257_5404190_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	2.15765e-36
NZ_CP023969.1\|WP_098951759.1\|5417999_5418593_+\|glutathione-S-transferase	gnl\|CDD\|198305	cd03196, GST_C_5, C-terminal, alpha helical domain of an unknown subfamily 5 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	1.91813e-58
NZ_CP023969.1\|WP_014718317.1\|5394497_5395199_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.202e-43
NZ_CP023969.1\|WP_032892132.1\|5396125_5400994_-\|NAD-glutamate-dehydrogenase	gnl\|CDD\|377452	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyze the reversible oxidative deamination of glutamate to ketoglutarate and ammonia.	0
NZ_CP023969.1\|WP_098951762.1\|5421281_5426285_+\|hypothetical-protein	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0.00100596
NZ_CP023969.1\|WP_098951760.1\|5419537_5420713_-\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	3.40263e-145
NZ_CP023969.1\|WP_098951749.1\|5405758_5407498_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.22821e-09
NZ_CP023969.1\|WP_056784594.1\|5404186_5404681_+\|DUF4381-domain-containing-protein	gnl\|CDD\|379552	pfam14316, DUF4381, Domain of unknown function (DUF4381). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 158 and 180 amino acids in length.	1.86309e-35
NZ_CP023969.1\|WP_098951757.1\|5414364_5418003_+\|AAA-family-ATPase	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	2.91625e-110
NZ_CP023969.1\|WP_098951745.1\|5395215_5395902_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.78023e-40
NZ_CP023969.1\|WP_032892143.1\|5411062_5413036_+\|hypothetical-protein	gnl\|CDD\|372638	pfam13582, Reprolysin_3, Metallo-peptidase family M12B Reprolysin-like. This zinc-binding metallo-peptidase has the characteristic binding motif HExxGHxxGxxH of Reprolysin-like peptidases of family M12B.	3.72119e-11
NZ_CP023969.1\|WP_098951747.1\|5404673_5405762_+\|VWA-domain-containing-protein	gnl\|CDD\|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	7.90044e-70
NZ_CP023969.1\|WP_098951755.1\|5413126_5414368_+\|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	3.09393e-77
NZ_CP023969.1\|WP_032892134.1\|5402292_5403252_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.80545e-90

>NZ_CP023969.1|WP_098951751.1|5407494_5409135_+|protein-BatD
MSRRTTLLLLLALSAGHAQAADLVASVDRSRLNSGETVELTVQSSDVTQFGKPDLSPLDAQFEVSGTRQINQLTTLDGDNHATTRWIITLLPKVNGNVVIPPLQVGALKTQPITLQVVESASQNTSAELAPVFIEANLDQTSVYVQAQALLTVRVYHSVSLYDDSSLTPLQIPDARVEQLGESRTYEKVINSIRHGVIETRYALYPQHSGSVVIPAQTFSATLVESRPPQENTLQGTKPGKMIHVSSAPLPLTVKPKPDAYPADAPWLPARSLSLSEGWNPTPDHVQVGDSLTRSLTVEAEGLSSAQLPALPGTEVNGLRRYPDQPVMANRTSDRGLTGSREDREALVPTRAGELELPAVEVVWWNTHEDHLERTSLPARTVHVAVNPSLVVDTPATPTIITAPDDDRLWLWQLSTLILACTTLLGFGLWWRARRQPAVQRAAQTGPSPRTLLDDLKRATQANDPHATRQALDAWARQQPETLADMAARFVPLSDALDGLNGALYSESGQYWLGDDLWRAIKAIPVAEREQDPATDTTSLPPLYPK
>NZ_CP023969.1|WP_098951749.1|5405758_5407498_+|tetratricopeptide-repeat-protein
MIALWPHWLRPWWLLLLPLLGWLLWQLWHRQKRAGRWQMILPPAFHAELLSGGNGRESKSPWVVLGIAWLLAVLALLGPSWQRVEQASQKPSDPLVVLLELTPEMLATDSPPNRLEQARRKLYDLLQARTDAQTAIIVYAGSAHTLVPLSDDLATSRNLLEALRPSIMPEPGHRADLAVEKALGLLKQGGLGQGRLLLIGSSLSKQERQGIRLQLQSAQAPTLSILGIGSREGTPVTQESGEFLKDDQGAILVPRLDSPTLKAFASEMGGRYRAARLDDKDLRQLGMLDSAQALRDDGQRLRLDTWADQGYWLLLPLLLLAACAGRRGWLFCLPLLLMGAPQPSYAFGLQDLWLRPDQQGQYLLKHKRPAEAAEHFQDPQWQGVALYEAGNYAEAIKRFAQGSDAYSHYNRGNALAKAGELEAAIDAYEQALEAQPDLQPALKNKALVETLMQEQAQPEAEPPAKNEDDETAQPGQTAQPGASAQTAQGGEQSSHGQGEAGTAETQTAATPLPGGNEVPGSELGDEQTTTPPLRPADTRLEGERRQALEQWLQEIPDNPGELLRRKFWYEQQQHQDTTR
>NZ_CP023969.1|WP_098951747.1|5404673_5405762_+|VWA-domain-containing-protein
MFEFAWPWIFALLPLPWVMRLVLPVADSGEPALKVSYLSDLEGLARRRARVNLPGWRQQAPFVVLWLLLLTAAARPQWLGEPLPIAASGRDLLVAVDVSGSMDFPDMHWQDEDVSRLALVKHLLGDFLEEREGDRVGLILFGSQAYLQAPLTFDRRTVRTWLDEARIGIAGKNTAIGDAIGLALKRLRQRPAQSRVLILVTDGANNAGQIDPLTAARLAAEEGVKIYPIGIGADPEQTGSLGILGVNPSLDLDEPALKALAEATGGQYFRARDGEELLKIKDTLDTLEPVEQQPTQARPAQALYSGPLALALILSLLLVIQERWPNNALQRGFNRLSSRGIFLQQHPEWRQRLQRLRLRRRR
>NZ_CP023969.1|WP_056784594.1|5404186_5404681_+|DUF4381-domain-containing-protein
MSSLDQLQPLIAPPAIGFWPPAPGWWLLLLVIPLLGWGLWWLRRYLPARRPVARAEQPLDPLRIAALAELALMPKPYDGAPAGAWLQQLNGLLKRLCRNDYPYSQSHTLNGRKWLAFLDNRCPAAGLTRWMVLVEGAYKPECKLDDKAIAGLTQAVDTWIRKHV
>NZ_CP023969.1|WP_032892136.1|5403257_5404190_+|DUF58-domain-containing-protein
MNASDGIRVTLSELIEMRHRVREVQLFSTPGQRSPLVGLHHSKLRGRGVDFDQVRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSCRLFFGSGQMFKSVLAAQAASLIGWAALGHNDRVGGLVFGDSEHYEIKPRRSKQSLLQLLNRLVRVNQSLNTERQPEADALGMALRRGREVLRPGSLVVVICDERALTEGAEQQLSLLARHCDLLLLPISDPLDHALPAAGLLRFAQRGAQLELDTLNIDLRQAYKAQAEARIARWERLAQKLRLLLMPLSTQSEMVEQLREYLNPQRPVKKP
>NZ_CP023969.1|WP_032892134.1|5402292_5403252_+|MoxR-family-ATPase
MEHREALLALRTFLSTQILGQEKLIDRLLIALLADGHMLVEGAPGLAKTKAIKELAEGIEAQFHRIQFTPDLLPADITGTEIYRPETGSFVFQQGPIFHNLVLADEINRAPAKVQSALLEAMAERQVSVGRSTYELSPLFLVMATQNPIEQEGTYPLPEAQLDRFLMHVKIGFPDAAVERRILQQARGEALNGETKPERRVSQQAIFAARKEILGLYMADAVEEYLVQLVMATRTPSKFDPEMAEWIAYGASPRGSIALDRCARAHAWLAGRDFVSPEDIQAVLFDVLRHRIILSFEAEAAGVDQDRVVQRILDVVAVA
>NZ_CP023969.1|WP_034135431.1|5401476_5401830_+|hypothetical-protein
MLQLKTDALMVTPCDDEEDNMAMLCCHGKNGEMFMLTRYPDEDEVELTWDYEPSTLDGLKVTLGDTTLLIELAAGDADALGGKDQLEITHSTAAADMAEVQETLQNILTGTGTFIRI
>NZ_CP023969.1|WP_032892132.1|5396125_5400994_-|NAD-glutamate-dehydrogenase
MAFFTAASKADFQHQLQAALAQHLSEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCTLSAWRLLERFDHTQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYSIHTLQTTVLSVRRGSKGELLEILPKGTQGEGILQESLMYLEIDRCANAAELNVLSKELEQVLGEVRVAVADFEPMKAKVQDLLAGIDASAFAIDGEEKAEIKNFLEWLVGNHFTFLGYEEFVVRDEADGGHIEYDASSFLGLTKLLRAGLTAEDLRIEDYAVAYLREPTVLSFAKAAHPSRVHRPAYPDYVSIREISADGKVIKEHRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGFQAKAHLGKELAQVVEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCYCLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDIDPLQLEKEVVQACRSWQDDYASLVVESFGEAQGTNVLADFPKGFPAGYRERFAAHSAVVDMQHLNSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHANGREFWIHDFAFIAAEGVNLDIQQLNDTLQDAFVHIVHGDAENDAFNRLVLTAGLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTADDLEDKQQRLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFKFDPRAIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPPANVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAKGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPNPNPATSFVERKRLFELPRSAWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQADKLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEGGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRNQLLASMTDEVGNLVLGNNYKQTQALSLAARKAYERAAEYKRLMSDLEGRGKLDRAIEYLPTEEQLTERASSGKGLTRPELSVLISYSKIDLKEALLKSLVPDDEYLTRDMETAFPPSLVAKFGEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLPHWFRQIEALDHQVSADVQLELMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPHLAALGLKLDELLEGPTREGWQNRYQAYTQAGVPELLARMVAGTTHLYTLLPIIEAADVTGHDAAEVAKAYFAVGSALDLPWYLQQISDLPVANNWQAQAREAFRDDVDWQQRAITISVLQMADAPQDMEARVALWLEQHQDMADRWRAMMVEIRAAVGTDYAMYAVANRELLDLALSGQSVLQPA
>NZ_CP023969.1|WP_098951745.1|5395215_5395902_+|GntR-family-transcriptional-regulator
MNAHALQRNCTLTSLRWTPEKKPSVDDIYPRLFDAILEQRIAPASRFTEEGLGELFGVSRSVIRRVLAKLSHQQVVILRPNQRAQVAAPDAQHTRQILEARRLTEITVVQLACAQATAMQIRQLRELIAQERDAIERDQRGPAIRFSGEFHLQLAHMAGNAPLAQFLNSLVPLTSLIIAQFEAKACTYCAWQEHVSIVDAVEQRDAHMAVALMTQHLDHLETRLLKHH
>NZ_CP023969.1|WP_014718317.1|5394497_5395199_+|FadR-family-transcriptional-regulator
MISTSTVVNSVVEKLRAALARGQWRRGEMLPGQRELAEQLGISRPSLREAVIVLETLGLVRSMPGKGVVVLETSVSEPQSSDAVADASLEDILQLRYTLEPFIVGLVAQSISSKEIGQLRLTLMDMREALDAGDAEAGMNAYIDFHEELFALTSNPIFQNVVQQTSTALKQSAQVLRNSPEHLAERLQENEAVVRAIRNKNSALASAEMRRHILQEGLRMGIRLNIPDDHLGS
>NZ_CP023969.1|WP_169918595.1|5409787_5410258_-|hypothetical-protein
MTFSIKPSSTSAFTALPEQPDADSRSRQASHRQARSAETQAIVPDTRPYASVTDRQLIGLIRDHFREFAAGATDSYVNFNELKEAAGLVATDRTFSPEAHHAAKELLSRPKLLRKLDIGISFFGGPGKEDGRFDMDNLNYLYKFPHREWKVPRRNH
>NZ_CP023969.1|WP_032892142.1|5410662_5410902_+|hypothetical-protein
MNKLIPDPPFPIFVAHEDLSFEDAIASISSLLRCAATTATETAEGLKGTQRDMACSTAHLIDMARTLADRALDCLQPKV
>NZ_CP023969.1|WP_032892143.1|5411062_5413036_+|hypothetical-protein
MNRPVLYALATCWLLMSSRLFAAEALFLLGPQVSAQSTAGHPANSALKAILDDQTTVQVNQLTLDAGLLTTDMQELAFPLEEGLVVVASKFQAEFASTRLFTWHGRLPDQRMINAGVQTGKEVPVDELNSAILVRNGDQVSGSIHYLGQLYQIVPVGAGEHVIVKVDTSKYPEDLVLPVDPPLEHSPAAPTSTALSAIRVLLIYTNQAKAAWPDMEGHAALMFAEANQGMAHSDVPIYFESAGVYHLDYSDKQGTDGYSQMLVDLRTPTHAALGGPVSLLREQQRADLVVMVSKASIYCGLAYVNAPKGYAFSIVSCPTGNYTFAHEMGHNFGLNHYSDVPAGQYGDGFGYQQKGHSPFWRTTMAYDCIPACPRGNYWSSPNRTYNGLPMGIAGIHNSVRVLNLRREVLANFYPPLEAQLPVGQLEIPLDVEANQTFVARAIATDPGGSTLDYAWSAPGFTPEVGSADSLSLKAPNVAQPLRKPISVKLTNAYGTTLLNKTLTIRPAIAPITATMDIPPTVIAGGQLPVKVDAYSSTDKPLTYAWSRTAGMYTGTTGGRPSGIYTAADVDKDTNTTIYVTVSDGTNEVKRSSSVVILTALALCAAPWEEEKIYATVNEKASYAGYNYEVAHWTQRQRPDLNAGPEGKPWRKLSSCSH
>NZ_CP023969.1|WP_098951755.1|5413126_5414368_+|exonuclease-SbcCD-subunit-D-C-terminal-domain-containing-protein
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLKAQRPDVLLIAGDIFDTVNPPLKAQERLYDFIISAHEQQPTLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDADRLLIPLPNAKGKIVAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRNKGQALIAISHAHMAGGSVSEDSERSLIIGNAEALPATLFDRSVAYVALGHLHKPQKVNGEERIRYSGSPIPLSFSEIGYKHQILDVTFQGERLVGCEPILIPRSVNLQRLDAAPLADILKQLGELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGTRGSAEADDAQLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEGEQP
>NZ_CP023969.1|WP_098951757.1|5414364_5418003_+|AAA-family-ATPase
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPRLGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKASGKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKANDNERSELLEKLTDTALYTQLGRRAFDKAKEAKDAHKQLQDQATGVVPLAPEARAELDQQLAEAQQQLKTQQAQLKQLELQHTWLKELREWQERHQHAVEQLQRDEQTWAAQGQQRQDLSLLEQLAPQRHHFLRQAELATLLTPLAAQIAQHLEQQTALHTRQEQAQHQQVAAQAALAEALKNQADAAPLLRQAIEEQNTLAHVSRELAKRNEEKHQHESACTEGQALLDGLQHTQAQGSERLQRLATELEHSAALAPLSDAWNAYRDRLQQLVLIGNRLNQGQAELGQLEQRASAAAEQFTLQREALDLLYHEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLARLWDSQQQLDQQAAALTQKLAEAAQKREQLNQTGLQTKAELTVAEQTLAVTKQLLERQRLARSASVEELREQLQDDQPCPVCGSHEHPYHQPEALLQSLGRHDESEEAAAQKAVDSLKEKLTELRGEVGGLIAQQKEFLQQQEQLATQQQGLAPSLQAHPLCASLFNQDVDKRSPWLAQQLAQLTQSISQDEQRQGALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRQLAGDRERLETELSAFASLLPVDTLEGLRSAPAATFMQLDQQVSQRLEQLGHQRDEQAEQQERQQAIEKQHTHQQHRQQQLDALNLQVAELADQQHAVQEKLRAVLGDHPSAEHWQQQLEQAVIQSRQSETDANQELHAVHTALVQLAADLNAQQQRQQALEAEQQALATRISEWRALHPELDDQGLARLLAFDEAQVTQLRQHLHSSEKAVEQAKVLLHEREQRLAEHQALHNGNLEAEQLDATLATLNQQLLEGEKHCAELRARQSEDQRRQNANQALAEQIAKAYEQWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHHANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVQRQGNGLSTLEVK
>NZ_CP023969.1|WP_098951759.1|5417999_5418593_+|glutathione-S-transferase
MSEALLYSFRRCPYAMRARLALRYSGVAVRIIEVSLKAKPAEMLKLSPKGTVPVLSVEGRVIEESLQIMQWALAQHDPDDWLLQGDPAVLALITENDQVFKHHLNRYKYAERYPEHSMEHYRAEGEVFLQKLETLLADREYLLAEHLSLADAALMPFVRQFAHVDREWFASTRYGRLQAWLQRFLDSPLFMAVMAKP
>NZ_CP023969.1|WP_032892147.1|5419201_5419381_-|hypothetical-protein
MNFNLFSIIAASAVSATVALPAAASVEVSGKKSSVTAYTQKYLQQSANFYAALDHKSQH
>NZ_CP023969.1|WP_098951760.1|5419537_5420713_-|lactonase-family-protein
MMMRKFWPLLMAGSVGAMSVQAAPSDVHELLVGSYTAGSSEGIYRLQFDSRTGQFNGKPVLAAKTANPSWLTISKDQKQLFVVNENGPGQEDPVGRVSSYSIDPQNHQLTLINQVQSLGNEPTHSSVAADGRYLFVANYSVVEDPGGSLAILPVDASGKLSAPVQLSGHPASRVNPERQASNHVHSVVSSPDGKYVFVQDLGADKVFAYRYDPKANHELPLTAANPASVQLPPGSGPRHLLFSADGKHAWLTTEMSAQVAVFDYNDGKLKQTQVVDYAAGQPVSDKAGAALHASNDGKFLYVSNRGTANQMLVFSIDPATAHLKEIQRRSVEGDHPREFSLDPSGKFLLVANQKSNEIVVVERDPKTGLLGKTVQKLPIDAPSDLKFLVRQ
>NZ_CP023969.1|WP_032892149.1|5420699_5420996_-|DUF5629-family-protein
MTAESASLRPVLETSDMLEIDGLHAFDFELTELKLVITAMDGRAEKRWSFTTAQVDAATFDDTLQSWTLTGESGEHRLICMSAFTGNNNDEDEADDDA
>NZ_CP023969.1|WP_098951762.1|5421281_5426285_+|hypothetical-protein
MIQGNYPQRFFAPNLPLSLPTPAARQTVGPHQEPLSNTANDQPLSRPRRASAPLRTTGTTASTPASESSAPLTATAVAHQFDTRPTLRSVVSGMLEEAIKSLYPTLAFNPAETAVAEPISSSPPQYRLTPLLDIALRHLTTEGDLDFTDKHALPCTLIDPVTGHTLKPTPSPDALMPGIDMQAIELAIRSLRAPLKKTFEQALLKHFMASTDAHSQGDNPWRWLSDTLRDTLTIAALKQPGLSAQQRETLDQVLTYPDRAQRQAAKGEAAAQVFILDSAVSHAGGNASQLTPDLLITRQVDGRMQVLHATAAGVVTPYDSLHAFGQAWGEKMGDAFVFDSLNWKRQEPAGNIFDTQAAVILNAVVENVASIEVPTTGSLEALEQAFTQASDPSPWFVGAYAPNARELDRLHEQLPTWFGSASAAERDTYRQHALALASSVRRNNGRTFLDGIPDIRTYTEQQLDQHLAGKGYTAKDVEVVFKVPVGDMGSNYLERVKMSLVDMALENLSGLPKGEMEVHLHGQRVSDASLPKMLKDLINTVDIGGHYPELLKRELLDDSPAARDRLARFIEQVPLQLAMQALELKLKGEAGITAQGHAFIEAVTQPGAGSKWVDGQEITVRPLAFVRKPGATPDVVANMFIIEPLANGSGPHLLYRPQLKPALLEFASRDALLEAIRKPGALQESVLAWLPDDKVRAVYGNGGFHTPNIARFTVFNEFDPPATPKPTALAVDGYAAASTLRQDLLNGDLATHWFHSNANSLVTLAEGQSTSDAQSRWASYKELGWLLFNTLLPLMRGPGAMAGWLLQLANAENDIKRLSTANDPDPAGAMVDLLVNLGMTLTHVPVAEPTPTRTFEPFKPRPETSNPAPRPRQSNDPVRPAPTIHQDPNAPVTTGLGAGTAIDIRLSSPRGLTPELRAHIDSFKAPAPAAPGTPIAEGIRKGLYQVDNRWYAKIDNHWFRVATDLDGPYVIDEHNKARTAPSIARDARGNWYFDLAPRLKGGMPKTKDLQSTIRQNLEARARTKEDFQRGWQERSKISKEHAGSMEKIRNAFAEYEQARKKLKTLRGLANNEASADRFAATYSNQRQAAEALRADLDQQLENLRPLTQSLIAASEHNIETLAPKKIGGIDDLSELKKNRSLEYQQTLSALIELDNIYVGLTSEMLKHGVNGASLAELTDKSNNGLEVSYNEMMEAFKIGYQDTEHLLAVRQTISSIFERWRNDSPFGYKAADSFLKQRYPVSLDTLLLTTQVNRLSYLQQLTTTRAARRLDEAVYFQMNRLMTENLKTEILTYEDLRQYHDYTLEERHAALITIITKFKQVLNDSRLMQEQRPEFFRVEYHHRFNELLNEFITQAETELVQVVKEEQFLLPAAPARTNQRAKPQNQRVFRTEHQETFIGTLRPSEPGRTVDIIDVVDPMSGQPIASYSEHPGERGWVKIVQGQPTAPRPASPPKSWSTYKSEAQNLIDGVPKIEKTILFQKKKLDDPLWRDTVSPRDWNDMLEAQANLLFEKAQQAQAAHGNKPETAEWVARWRAAAEQMLQKARQHTADGYLVQTPTAENVDYLWRHGFVDINLVRRDIPTRSGDVFTEYVVRKKNKIDALWYAHFHYPEKGWARDDFRAAHLKTPQQRIKTQKMLIEEAGNNGVVEKLIKAAITKPLAEKLFLKL

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Crispr_ID: NZ_CP023969_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_21

5470254-5470349

Orphan

Consensus_repeat	Method
ATCCAACTGTGGGAGCGGGCTTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_21

>merge|NZ_CP023969|21|5470254-5470349|CRISPRCasFinder
ATCCAACTGTGGGAGCGGGCTTGCCTGCGATGACGGCCTGACAGCCGATGCTTATCTACCTGACGCACCGCGATCAAACTGTGGGAGCGGGCTTGC

>NZ_CP023969|21|20|5470254-5470349|CRISPRCasFinder
ATCCAACTGTGGGAGCGGGCTTGC	CTGCGATGACGGCCTGACAGCCGATGCTTATCTACCTGACGCACCGCG
ATCAAACTGTGGGAGCGGGCTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098952693.1\|5476115_5477138_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP023969.1\|WP_098951795.1\|5461405_5462410_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274135
NZ_CP023969.1\|WP_098951804.1\|5483511_5490684_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|339245
NZ_CP023969.1\|WP_032892180.1\|5468006_5468195_+\|CbtB-domain-containing-protein	unknown	unknown	gnl\|CDD\|370526
NZ_CP023969.1\|WP_069558666.1\|5469370_5470117_+\|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl\|CDD\|225430
NZ_CP023969.1\|WP_164545349.1\|5466299_5467418_-\|cobalamin-biosynthesis-protein-CobW	unknown	unknown	gnl\|CDD\|274151
NZ_CP023969.1\|WP_098951801.1\|5477220_5479512_-\|fatty-acid-cis/trans-isomerase	unknown	unknown	gnl\|CDD\|369142
NZ_CP023969.1\|WP_098951803.1\|5479678_5483389_+\|methionine-synthase	unknown	unknown	gnl\|CDD\|236539
NZ_CP023969.1\|WP_098951793.1\|5460749_5461352_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224161
NZ_CP023969.1\|WP_032892193.1\|5495778_5495997_+\|DUF2970-domain-containing-protein	unknown	unknown	gnl\|CDD\|378581
NZ_CP023969.1\|WP_098951799.1\|5471747_5476106_+\|SET-domain-containing-protein	unknown	unknown	gnl\|CDD\|380920
NZ_CP023969.1\|WP_098951806.1\|5495993_5497061_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380547
NZ_CP023969.1\|WP_098952559.1\|5458609_5459911_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP023969.1\|WP_003190712.1\|5497487_5499146_+\|nitrite/sulfite-reductase	unknown	unknown	gnl\|CDD\|223233
NZ_CP023969.1\|WP_003190731.1\|5468907_5469300_+\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|376648
NZ_CP023969.1\|WP_032892187.1\|5470949_5471534_-\|Fe-S-biogenesis-protein-NfuA	unknown	unknown	gnl\|CDD\|132384
NZ_CP023969.1\|WP_032892181.1\|5468206_5468911_+\|CbtA-family-protein	unknown	unknown	gnl\|CDD\|227733
NZ_CP023969.1\|WP_098951805.1\|5490883_5495710_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951796.1\|5462535_5466297_-\|cobaltochelatase-subunit-CobN	unknown	unknown	gnl\|CDD\|235663
NZ_CP023969.1\|WP_098951791.1\|5457404_5458352_+\|DUF1853-family-protein	unknown	unknown	gnl\|CDD\|378094

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098952693.1\|5476115_5477138_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	5.35787e-28
NZ_CP023969.1\|WP_098951795.1\|5461405_5462410_-\|AAA-family-ATPase	gnl\|CDD\|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	4.58365e-122
NZ_CP023969.1\|WP_098951804.1\|5483511_5490684_-\|hypothetical-protein	gnl\|CDD\|339245	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting. This NEL or novel E3 ligase domain is found at the C-terminus of bacterial virulence factors. Its sequence is different from those of the eukaryotic HECT and RING-finger E3 ligases, and it subverts the host ubiquitination process. At the N-terminus of the family-members there is a series of LRR repeats, and the NEL domain interacts with the most N-terminal repeat. The key residue for the ligation step is the cysteine, eg found at position 386 in UniProtKB:E7K2H2. The LRR section sequesters this active site until invasion has occurred.	4.63092e-30
NZ_CP023969.1\|WP_032892180.1\|5468006_5468195_+\|CbtB-domain-containing-protein	gnl\|CDD\|370526	pfam09489, CbtB, Probable cobalt transporter subunit (CbtB). This entry represents a family of proteins which have been proposed to act as cobalt transporters acting in concert with vitamin B12 biosynthesis systems. Evidence for this assignment includes 1) prediction of a single transmembrane segment and a C-terminal histidine-rich motif likely to be a metal-binding site, 2) positional gene linkage with known B12 biosynthesis genes, 3) upstream proximity of B12 transcriptional regulatory sites, 4) the absence of other known cobalt import systems and 5) the obligate co-localization with a protein (CbtA) predicted to have five additional transmembrane segments.	2.74963e-15
NZ_CP023969.1\|WP_069558666.1\|5469370_5470117_+\|precorrin-4-C(11)-methyltransferase	gnl\|CDD\|225430	COG2875, CobM, Precorrin-4 methylase [Coenzyme metabolism].	2.70099e-135
NZ_CP023969.1\|WP_164545349.1\|5466299_5467418_-\|cobalamin-biosynthesis-protein-CobW	gnl\|CDD\|274151	TIGR02475, Probable_cobalamine_biosynthesis_protein, cobalamin biosynthesis protein CobW. The family of proteins identified by this model is generally found proximal to the trimeric cobaltochelatase subunit CobN which is essential for vitamin B12 (cobalamin) biosynthesis. The protein contains an P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. A broader CobW family is delineated by two Pfam models which identify the N- and C-terminal domains (pfam02492 and pfam07683). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	0
NZ_CP023969.1\|WP_098951801.1\|5477220_5479512_-\|fatty-acid-cis/trans-isomerase	gnl\|CDD\|369142	pfam06934, CTI, Fatty acid cis/trans isomerase (CTI). This family consists of several fatty acid cis/trans isomerase proteins which appear to be found exclusively in bacteria of the orders Vibrionales and Pseudomonadales. Cis/trans isomerase (CTI) catalyzes the cis-trans isomerisation of esterified fatty acids in phospholipids, mainly cis-oleic acid (C(16:1,9)) and cis-vaccenic acid (C(18:1,11)), in response to solvents. The CTI protein has been shown to be involved in solvent resistance in Pseudomonas putida.	0
NZ_CP023969.1\|WP_098951803.1\|5479678_5483389_+\|methionine-synthase	gnl\|CDD\|236539	PRK09490, metH, B12-dependent methionine synthase; Provisional.	0
NZ_CP023969.1\|WP_098951793.1\|5460749_5461352_-\|VWA-domain-containing-protein	gnl\|CDD\|224161	COG1240, ChlD, Mg-chelatase subunit ChlD [Coenzyme metabolism].	4.92669e-36
NZ_CP023969.1\|WP_032892193.1\|5495778_5495997_+\|DUF2970-domain-containing-protein	gnl\|CDD\|378581	pfam11174, DUF2970, Protein of unknown function (DUF2970). This short family is conserved in Proteobacteria. The function is not known.	4.19479e-22
NZ_CP023969.1\|WP_098951799.1\|5471747_5476106_+\|SET-domain-containing-protein	gnl\|CDD\|380920	cd10522, SET_LegAS4-like, SET domain found in Legionella pneumophila type IV secretion system effector LegAS4 and similar proteins. LegAS4 is a type IV secretion system effector of Legionella pneumophila. It contains a SET domain that is involved in the modification of Lys4 of histone H3 (H3K4) in the nucleolus of the host cell, thereby enhancing heterochromatic rDNA transcription. It also contains an ankyrin repeat domain of unknown function at its C-terminal region.	3.22386e-11
NZ_CP023969.1\|WP_098951806.1\|5495993_5497061_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380547	cd06324, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	6.10447e-119
NZ_CP023969.1\|WP_098952559.1\|5458609_5459911_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.75967e-07
NZ_CP023969.1\|WP_003190712.1\|5497487_5499146_+\|nitrite/sulfite-reductase	gnl\|CDD\|223233	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism].	0
NZ_CP023969.1\|WP_003190731.1\|5468907_5469300_+\|cobalamin-biosynthesis-protein	gnl\|CDD\|376648	pfam01890, CbiG_C, Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. The protein encoded by Synechocystis sp.cbiH represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyze adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyzes a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyzes the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.	1.60647e-39
NZ_CP023969.1\|WP_032892187.1\|5470949_5471534_-\|Fe-S-biogenesis-protein-NfuA	gnl\|CDD\|132384	TIGR03341, YhgI_GntY, IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.46752e-120
NZ_CP023969.1\|WP_032892181.1\|5468206_5468911_+\|CbtA-family-protein	gnl\|CDD\|227733	COG5446, COG5446, Predicted integral membrane protein [Function unknown].	2.20172e-86
NZ_CP023969.1\|WP_098951796.1\|5462535_5466297_-\|cobaltochelatase-subunit-CobN	gnl\|CDD\|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0
NZ_CP023969.1\|WP_098951791.1\|5457404_5458352_+\|DUF1853-family-protein	gnl\|CDD\|378094	pfam08907, DUF1853, Domain of unknown function (DUF1853). This family of proteins are functionally uncharacterized.	3.13428e-110

>NZ_CP023969.1|WP_069558666.1|5469370_5470117_+|precorrin-4-C(11)-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVIIYAGSLVPAAVLEGHQALQVVNSAELHLEQIIELIKTAHAQGQDVARVHSGDPSLYGAIGEQIRHLRELGIPFQIIPGVTAVAACAALLETELTLPDIAQSVILTRYADKTSMPPGEDFDSLARHGTTMAIHLGVNHLEKIVAELLPHYGADCPIAVVHRATWPDQEWVVGTLSDIAEKVAAKGFRRTALIVVGRVLASDSFSESSLYRAGHAHLYRP
>NZ_CP023969.1|WP_003190731.1|5468907_5469300_+|cobalamin-biosynthesis-protein
MILVVGLGCQRGCEVHSLLALLDSALAEAGIERSRVTALASIDRKRDEPGLLALAQRLNLPLQCLSAEQLVGYEHRLSHRSALAFAHTGCYGVAESAALALAEHLSNGPARLLITRQKSAQATLALACAG
>NZ_CP023969.1|WP_032892181.1|5468206_5468911_+|CbtA-family-protein
MIKRIAQTAGFTGLLAALLLTLLQSFWVAPLILQAESYEKAPPAAEVAHEHAAGAAAHTHDAQAWEPEDGWQRVLSTTGGNLVVAVGFALMLAGLYTLRAPTRTAQGLLWGLAGYATFVLAPTLGLPPELPGTAAADLTLRQTWWIGTAASTAAGLALIVFGRNWLLKGLGLAILAVPHFIGAPQPEVHSMLAPEALEAQFKIASQLTNVAFWLALGLISAWLFRRNRDDQYSA
>NZ_CP023969.1|WP_032892180.1|5468006_5468195_+|CbtB-domain-containing-protein
MSIISSTSHSATSTATLSQRLTAAIGASILGACLVYFAGFSHIEAVHNAAHDTRHSAAFPCH
>NZ_CP023969.1|WP_164545349.1|5466299_5467418_-|cobalamin-biosynthesis-protein-CobW
MLRAAAGPVVPYARPKGHPMKTLAKLPVTIVTGFLGSGKTTLLRHMLDNAQGRRIAVIVNEFGELGIDGEILKQCSIGCTEEEANGRVYELANGCLCCTVQEEFFPVMRELVARRGDLDHILIETSGLALPKPLVQAFQWPEIRSACTVDAVITVVDSPAVAAGTFAAFPDQVDAQRKLDPNLDHESPLHELFADQLASADLVILNKTDLISAEDLARVRLEVAEELPPAVKIIEASSGRLPLDVLIGLGAGSEEHIDGRHSHHDHHHEGEDDHDHDAFDSISIDLPQADEALLLDALTQLVVQHGILRVKGFAAIPNKPMRLLIQGVGTRFDKHFDRAWGADEARTTRLVLIGQELDAAGLEAQLRAALSV
>NZ_CP023969.1|WP_098951796.1|5462535_5466297_-|cobaltochelatase-subunit-CobN
MHLLRTQPGGFVADDNIADLGQTPAELVILCSGDSSLALLAEAAQQLPEDYPSLRLANPMQVQNHASVDLYVDEVLRHAKVILLSLHGGIGYWRYGIERLVELAERGVTLILVPGDDRPDPELSGLSSVAVEHRERLWHFLRQGGLGNALDFYHCLASTHLGRDYAWAEPQALPRTAIYHPHTANARLNDWQADWHADWPVAAVLFYRSHLQAANTGFIDVFCQRLQAAGLNPLPIAVASLKEPGCLTVVEDLLDGVQAAVILNTTGFAQSSPEAPHLRPFRRNIPVIQAICAQDNQPGWQASEQGLGPRDLAMHIALPELDGRIISRPISFKDLAWRSERSQSDVVCYRAAPERMDFVAELARRWVELARVPNAQKRIALILANYPTRDGRIGNGVGLDTPAAALNILRALQTEGYPVAERLPESGTALIHELLGGVTNDLDSLDLRPCHQSLGLVEYQAMFDRLPASNRQAVLERWGAPQNDPMCRDGRMMIAGLRLGLTFVGIQPARGYQVDASAVYHDPDLVPPHGYLAFYFWLRHTYGAHGVIHVGKHGNLEWLPGKGVGLSEHCWPDALLGPLPNIYPFIVNDPGEGAQAKRRTQAVIIDHLMPPLTRAETYGPLRDLELLADEYYEAQLLDPRRALELQKDILKLVRETRIDQELELGSEADVAVWLPRLDTYLCDLKESQIRDGLHIFGESPEGRLRIDTLLALLRIPRGDGRGPQSSLLRVLAKAFELGFDPLDCALAEPWTGRRPFVLQKIDDQLWRTAGDTRERLELYAARLIEQALEGPIEQLEEPGWHEVKSVIESLRIVVAPRLDACGPAEMRGLLDALSGRFVPAGPSGAPSRGRLDVLPTGRNFFTVDVRNLPTTTAWRIGFQSANLILERHLQDHGDHLRQLGLSVWGTATMRTGGDDIAQAMALMGVRPVWATGSQRVDDFEILPISLLDRPRVDVTLRVSGFFRDAFANLIRLFDAAVQAVAALDEPDDMNPLAAKVRSERQALLESGLDEAAAAKQAGWRIFGAKPGAYGAGVQGAIDGRLWQSREDLAEVYLNWGGYAYGGSDEGTAAREQFAQRLSQVQAVLQNQDNREHDLLDSNDYYQFQGGMLAAVETLSGDKAASYHGDHSQPDLPKIRTLKEELNRVIRSRAANPKWIEGVKRHGYKGAFEMAATVDNLFAFDATTALIDDHQYALLADAYLLDPDTRAFVQQHNPDALRDMTERMLEAQQRGLWQAPGAYREALENLLLDIEEDS
>NZ_CP023969.1|WP_098951795.1|5461405_5462410_-|AAA-family-ATPase
MTDTPHFPLSAVVGADDLKLALCLAAIDPKIGGVLIEGPRGMAKSTLARGLADLLASGQFVTLPLGATEERLVGTLDLDAALGEGRAQFSPGVLAKADGGVLYVDEVNLLADHLVDLLLDVAASGTNLIERDGISHRHAARFVLIGTMNPEEGDLRPQLLDRFGFNVALSGQTLPAERGQIIRRRLDFDTDPSAFCTQWAPAQAALRERCTQARARLDSIALDDQALALITERCFAAGVDGLRADLVWLRGARAHAAWRGAAAIEQDDIDAVAEFALRHRRQQQTPPGAPPEPSDGPSPSPSDTSPGQGQWGDMPAPALPTGARRDVPTWPKKP
>NZ_CP023969.1|WP_098951793.1|5460749_5461352_-|VWA-domain-containing-protein
MNSGRQGKARSAQRGAINWPGTLLGGRPQCRADLLLHLRSRSAPELWLVIVDASASTRRHRALTDAKGLLAQLFDDAYRQRARMALLTASGQSPKWQVQGLKAAKGLAEWLAQLGAGGGTPLLAALTEAGHWLAARRKRYPAEQQKLLVVTDGRLKAMGALPRLECPGVLIDIERGPIRLGRAEELAVGLQLDYQHIDKL
>NZ_CP023969.1|WP_098952559.1|5458609_5459911_-|IS4-family-transposase
MAKLALEQAIAPEWVDQVFEEHRQRQYSRELLFSTIIKLMSLVSLGLKPSLHAAARQLEDLPVSLAALYDKISRTEPALLRALVTGSAQRLTPTIKELGCTTMLPDWQVRVVDGNHLASTEKRLGALRQERGAARPGFSVVVYDPDLDQVIDLQACEDAYASERVCVLPLLANAEPGQVWLADRLYCTLPVMEACEQVQTSFVIRQQAKHPRLIQEGEWQEPVPVETGSVREQIIQVRGGYQCRRVELTLHSPTDSGDSSLMFWSNLPESVSAEQIAQLYRRRWSIEGMFQRLEAILESEIETLGSPKAALLGFTTAVLAYNVLAVLKRSVEQAHRETQPDGWEASIYHLAVQVRSGYEGMQIALPSEYLPAIPVEKLAQRLLELARNIQPKQVAKSPRGPKVPKPKTWVQGKAVNAHVSTDRVIKAAKTKRP
>NZ_CP023969.1|WP_098951791.1|5457404_5458352_+|DUF1853-family-protein
MTPFPDLHTLPRQLRHPEVRDLAWVMLAPPMLAQTPWPQRHPLAGSDWVKAPHQLEAWLRQLDQDSSALQQWLSLSRTRRLGLYYERLWQFAVQHAPGVELLAANLPIRRAGHTLGELDMLVRDRDGVHHLELAIKLYLGPQDGNGQDAAQWLGPGCHDRLDRKLAHLTQHQLPISARAESREALAALDIQQFDAHLWLGGYLLYPWPGAAHSPLGAHPQHLRGRWLHQRDWAGFVSTRPAGRWQPLPRHAWLAPAHYPADEVWSEVQMQGWLADLDPMAPAQLLVRMVPNGEEWEEAERLFLVADLWPNVPGTG
>NZ_CP023969.1|WP_032892187.1|5470949_5471534_-|Fe-S-biogenesis-protein-NfuA
MTAITITDAAHDYLADLLSKQNTPGIGIRVFITQPGTQYAETCIAYCKPGEEKPEDTALGLKSFTAYIDAFSEAFLDDAVVDYATDRMGGQLTIKAPNAKVPNVNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLKFGGGCQGCGQADVTLKEGIERTLLERIPELKGVRDVTDHTQKENAYY
>NZ_CP023969.1|WP_098951799.1|5471747_5476106_+|SET-domain-containing-protein
MNNALQSFYFNGLPEQQAHLDHLIEFVTAHISRSVTAAEVYYYPPPQSELNRECKEAFRVLAKLEADEDFQQFLRDKPEPDNSLLGRDFLYDLLSTLLSSARSPVPDPPETFSIADRSVILRHVPTYWYIDVDVLLDINRRVGNGLKSDGSVRFDLVLKYYAILPSHPKTGEQWKSVLYGLQEHCALKKLGHEGSISDLQHLLDAPADKKIKSVIQEIQTHTRKSLFQCVLPPTFSSSQQAMLSTTPTVLLEQILNSPSNLALAERIAKALDWYGSQKAQTCPQPVLVKLLWRALWLTIIPNPRSTLDNELKLFITPGASYKSVRQDLISQYHHTLSISTDAAQLAMCVVKANVASEVWVADIPDDLPYAAASTWVNFRSGFLLAETLAPGSSRHMSFEQLLNLTAEHFRASGDDVKQQALVAAAKLGPTVQWAQANGLIASRKSGHSREELAQAVTALEQHEYEVFNAVQNLALHLPSRWRSASDAEYDKAFREALERPRNAYKVLIQSLLAHLGSWTLDVDRDEITVYSLREALNKVPIEYETKRKADAVRYRTGFILRIVKARDPFSALYVEVFPLAGVIRRRGDIDTLPLNGKVVELRDAMSWCKYRLATEVPFDREAYRENKAPRRGKKAEMIVEQVGETLPGIDSHTSRPSSFAPNTLYAPRSEALASMIARELFFCDEEALLEKTRKDTREVDIGAEVLEDLAFWGKIFVPFWAGIEDIASGDPQRIKSGVASLFIDIVAFALPVGRYVAGSTRLLIQAGKTGLRLAMPKLAKLTGKLVIATLQEFNPLAALPSLLRLARMGMLKLGHKLMRQTKRGIALLRDGTIAARHMRSVDPDSWKPLLAGDRLFTVDGFANIPMRNVGSLDAPDYRLIDAASNTAFGPRYREPITVISNSSPLIRRYAVDPELIRGLTPDARGLFSRADYNQKFICNIDDKGKIAVYQVRDNSYGFIQETAAGADNSFSIVLVNPKTNRDLSITLSSVEPGHWYSSQIKLAGGAPDAPNVVTPSILLKWTEASEEALKKTMDTFVSTYNLNPTAFRQFVNSRNTLTRRGQQMLDRVGTARSSVTYDHLERWSKVSQRERNSLTLEGFAADHNLDPVDFAEHVNLDGSYRAAGKVLAKYASGGDFDVLTPEHLKAWNTHYNAANSRVSMLSFVEAKNLNPVIWRSYVNDNGSMTRAGREMWLFGQRSPLDQPVARKRPAPPPTAGSSKRPRLEDNTPPTRRRSTSITGSFDHKINNNAAILQDPTDVRRSLTLELEGPLHTIEITDANRFFDEFTGLQHVEVKEAATKSIREWISKEGSHHRRLDRLLEVKKLANGPERGLSVVAKTDIKRFDVLGPYTGKLHRDQASINAEILEKGEAAVGTYLFQTNTQGATISGHGNSSTLSLINAVKVPNLPDVGIENVGALYVGKYMVFLIAWRDIPAGTELLMDYGKAYWKYMRP
>NZ_CP023969.1|WP_098952693.1|5476115_5477138_-|acyltransferase
MLISVQLLRALAAWLVVGHHVMQLFFNFEVHNALEDLLVEKGGAGVDVFFVISGLVIFLATADKALTPWRFMLMRVARIAPAYWFYTVLLAVLAAAMPSMFADVELELGHILLSMLFIPAQNPAGYGVYPLLDVGWTLNFEMLFYCLFAAALLVGQAYRLWVVALLLYLLCYVIGPAFDLADGFYRNDIVLEFLMGVAIGMLYRRGLCRARPWLALLGIMAALAAIYHGADVPRALEWGLPSAVLVISCVALEPYLRGSRVIKMLGDCSYSVYLLHVLVLCAGRWAIEQRGVDPYTMVPVCIVIIALGAFASYHVLERGTHRRLKRWFGIDDAIPSRQAH
>NZ_CP023969.1|WP_098951801.1|5477220_5479512_-|fatty-acid-cis/trans-isomerase
MSLRLIVSAVLALIASSAQAEGPASAISYTRDIQPIFTEKCVACHACYDSACQLNLGSAEGAARGASKMPVYDGERSQATPTTRLFYDAFGKQAWQQKGFYSVLDAQGSQAALMARMLELGHNAPLAPNAKLPDNIVLGLNRENMCATPGEFTAYAGAHPKEGMPLAVTGLTDQQYQTLQRWLASGAPIDEQGLAPSAREALQVQQWENLFNQPGARESLVARWLFEHLFLAHIYFENGEPGHYFQWVRSRTPSGQPIDLIATRRPNDDPGTQVYYRLWPVQGVIVHKTHITYPFSAQKMARIKALFYGGDWQVTALPGYGPGSRANPFATFEAIPAKARYQFMLDNAEYFVRTFIRGPVCRGQIATDVIRDNFWTLFQDPDHDLYITDARYRGQATPLLAMPGQNDDVGSVLSLWLAYRDKRNQYEALRRDNYADLPAPSWSTLWAGNDNALLSIFRHFDSASVTKGLIGEVPQTMWLFDYPLLERTYYQLAVNFDVFGNVSHQAQTRLYFDLIRNGAEQNFLRLMPADTREDFMDDWYQNSGKLKLWLDYEAIDDDKASGLHLSEKDPKRDFANQLLTRYGHLNASPDPINRCSGAFCSRDGIDPALQDAEQALSRLTSRPAAGLKVIEQLPEATMLRIETASGKREVYSLLRNRAHSNVAFLLGEAYRYQPGLDTVTIYPGVLSSYPNFMFNIPARQVPEFVAQMEQAKDAKSFEKIVDRWGVRRSHPLFWQYFHDLSRYIHETTPVEEGVLDMNRYENL
>NZ_CP023969.1|WP_098951803.1|5479678_5483389_+|methionine-synthase
MSDRSVRLQALHHALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVLTRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGMEELAYELNVEGARLARKVADAKTHENPAKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATQGLIEGGADLILIETIFDTLNAKAAIFAVQGVFEALGIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGASELRPYLEELSNKANTHVSAHPNAGLPNEFGEYDELPSETAKVIEEFAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRPIPEIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRAGLTMGIVNAGQLEIYDQIPAELRDAVEDVVLNRTPDGTDALLAIADKYKGDGSVKEAETEEWRGWEVNKRLEHALVKGITTHIVEDTEESRLSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKAGFVEKTRLEYIDVRERTSNRSARTERLSYAAAIAKKPQFDWSGYTPVEPTFTGAKVLDNIDLNVLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYEDARAMLKKLIDEKLISARAVFGFWPTNQVQDDDLEVYGDDGQPIARLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYIGGFITTAGIGAEEVAKAYQDAGDDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDEQLDNEALIKEQYSGIRPAPGYPACPDHTEKAQLFQLLDPEAREMQAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKVDKDQVTSYTARKGQDLAVTERWLAPNLGYDN
>NZ_CP023969.1|WP_098951804.1|5483511_5490684_-|hypothetical-protein
MADVTQPSSPAATQSLHGDFLERASPSWLIEAIPARKQALKDAATPQPAWLEKASPEQRKALAASFLASFTAQTQLDKTMASFQDIDAFARPLLLKALKDQYQVEVDVDKTLLCLRRPLAVGILEVEVSDFQFLKLSMLEAALHNFEAYECKEGAYHKTSGFMEATSTPGTYHSVTLNLKVSQFLSLCRSLDIGAKYQAYLQSFFYPEEGAAHVTLREHFIASQKAALKAAAEQAVLTGDIQPADQRMILSVIEGEIHPWMGDKQVWFRTLGLMKLRMTGCMVFLICKKYTYPNELIIYIPQDPVHPLKRYTWAQMEKEFKRLFTERDADKRADPAPTPYQAFFSRFVPYAKRAYYFSQFTQKAADSPTDIWRSPWKKLLDFTTPQFITGIKELPPQAPAKLEPNNDPYLAPSTRTRAGKGIWAANIDPWKYFYEQHREQLIADARAHAVPTAEVDAKARDAKLAHLLEIGMLGLNIASMFVPVLGEVMMGVMAGQLLYETLEGAVEWGEGDLQAAKAHLVDVAENLAQIAIMAGVGAAVSWRAAKAEPVIETLNEVTLPDGRTRLWRASLDRYASPVVLENTLSPNALGQYVKDGKTYVRLGAQAYEQTYDTSLRKWRIKHPSDPQAYQPILEHNGHGAWQHTLERPLEWDRLTLLRRIGHATEGFTDEALLKLADISGVSDNTLRKVHVERTVAPPELLEAMRLFKADTAAADVIEQLEGSKPIDELYLYALPLIVEMPRWPQGRALEVIDGPALTAKPVKYGAGRSRIGATIKVSREHILGGELPERILQALDESERVKLLGAEAARVSEARTLEFSKQLADYARQRKPAIFDSIYTGTEAVDPRVRRLQRNCPGLSESAAHAVLEHAQADELAAFDSATRVPLNMLEEARWYARQGRLVRAYAGLRREAIATADTRRLALHTLQTLPGWPSTLRLQVRDGRVDGALLDSIGPETASEKKYLVKQGPAYQAFDERGEALNSLPSHGDNFFASLMHALPDDARQSLGVPQVSQHAALQAKIIEQADAYRMQAVEWLEPKTRWFKPPVRINGVLKGYYASGRAPDHRQAVIREVRRIYPDLTDAQVDDFILELRQAGNDVRAIADRLRALFEENRQMQATLDDWISRAAPAERHYHLLAAQALKRSWRQAVLAGKVAGAEVLSLNLDTPLPPLTANFSHVRELNVSGAALHDGNIDEFLRYFPSLESLSIEATQGLRAERVPRPLLTNVPFSLVRLEGLKHLKLTFRASELAEQFPARLATLTGLERLEIGYFGYQSARLDSLDLTPLNQLKTLKVVAPNVTLHWPAYVQQLALLERLDLAQTKVLKLPDSLYTGYERLWRGLSLDWSQLSYEAFKPAYEHVKNYAGTAGPHLVNLDEMVRGFAQGELTLLMGEKTVAERVTNALMSTWKTPQTRMNALQALREEHLGIFKQFYQPSTLLGIRHKFRVAHWEAGYNARILTALEKSWSWAVRKRYGVKLDDELSGQVDTFDGSVFELPAFDLPTAAELSSDKIDELPVLPAGTFSHVKTLKLSWLEDVPADQLKGFVHAFGGVEQLELRYSHLSDVPVAADVLPSLTHLNLSDNHIVVTPAVQAQFDGMKNLQVLNLQYNRLGRLNVSAMTNLTALNLRETLLQAWPTGAENLTQLACLDIRDNALTSVAPGALSHADMLLRTELAGNPLSTQGEAALTAARNRIERQRGLPEGALSRFALAQEPWPFPPPETAASLSRYLLPWRELPEDPGYPLSFVVRLRRVNAMLNDEQGAARIEQLRQAGMSDAQLDTLLSQWQRTFEALTRTLNGWVFSREIRIADGDTVAFTRTRAAESIRFSWQQGVTAGRTGQVGDTLSLRALRTGDLPALNLAFDHIRTLDLTGVRLTAQGSNEFLGAFTRANRLILSGNQLSALPDAVAGMTQLERLELATNLFTEAPALPTQAGAERLRWLDMSHNDLEAFDASAFSRLETLDLSYNSLSTWPEGVLAAPHLTRLDLSGNVLTSLPPGLLSGAHDALVAGTDLSGNHTLTLATREELYQYAKMHQLTNLMGFHRVELDAWHQHFDAGSDSDSDSGSDPDSDDSDGDSGGDPGAAVEPVEAVPELQRTVANASLEPWLEGSNPGQITQRTALWVLLAHAPDHDRFFWLISSLRLTSEFNFNRASLTQRVWDVIEAATTNAELRSLLFVEAETHGTCIDGRILTFSQMEVRVFEYRALHGIPLQRPDLRGRALLDLSRQLFRLDRVDQLAEASATGLDRAEERLRYRIGLTRGWPDGLELPGQPEYMAYGRPLEGTRRAQIQASILAQEGSDEFIEYLVAQDHWARYLQERYPEQFDALNKELAQKYEALEDEHAERADAQSLRRYEEALNQLEVERATARNLKLMQLSRMEIQRLASIR
>NZ_CP023969.1|WP_098951805.1|5490883_5495710_+|hypothetical-protein
MPNPAPPPPTVFEQLPAQAVHTRFASRPALYSVVFNALRRGILEHYPTLQLDLRSVKLATPHAEGHYTYPSLMEFAIAHVLKPQLMDLHPQRELPYYLTQQPPKILKPRAPALIDMQVIARLLDELPESLYLHWQHDLADYWSSVDSHGRSRWQWLSDFLHGQMTATAARSSHLDETQRDMLAVVAAWPVLAERLPRSTPATYVYFIENTFNRAGQEALLLTPDLLLVRDKQVLLYSLAGHIETFDCIDAFSQSWATRMQARFTFDSMTWRRNEPNGNVFDQQAGLILNQQLQDLATLTLQGQDEITLGRRLETLTDPAIFFTPVPVPPAPFLHQLSAQLPGWLSQADNADRFAYHRHLQDMALVLQQSEGQSFNQGIEDLHSFSRAALRKQMQADHGDYDPDDAMLDFTIGAGYPGGAGIVEHVRLSLTELAVKNLAGKPSGTLELLAKGAQALPSWLTEDYVLGASGLIQRVDIGTAYPQNIKDTLLSDTADARRREALFTRALKVRLPMQALELKIRRQHGVSIAGYRYVKALMGESPLERFVDGQEIVLRPLALCRKPGASPDEVSNAFIIEPRDANIGPHLLYQPLYADALHEYPTRQALLDALASPGALQDSVLTWLSDKARPIYDHGGIREPHLIRFLPGDELSVLEKPEPATLAVDEGAGEWLQSQVNGQLLNHLFGSTARALVDLADRESVSNSESRWALVMEGAWLLFNSLLLPLVRGPAMLAGWLMVLVGSLAQDLAGLDSDDPTTREVALIDLLLNTAMVLLHAASPSARPLAEPGAQDHALHLQTWRRPVGLPRVQSTAVVHHGPVALPGEPPASGHTALDFSRSLASPMASATLLKALVEVHVPWPAILPAAQPSGALKGLYRIDGAWHASVGGMLFQVSVVPGFGEVYLVHPQHPQRPGFRLTSDGQGHWRLDRRARLKGGMPRESLNKWLSAREQRIQSLTQEFAALLVEMNASVTVTTGFESALNTARANLVDQAKRLRDDWLLLGTSTGIPQLHLRVTQRHAARRVSTAHARAQWETALDNYQQNGRALIPLMQRIEAKADELMQTDRTNPAHKPARDKATRIIYSYWSSVFECLAQKMADTLASDTGENASELGERANRELAENITHAYDEYIDTKKQQVAALNQMIEPAEHIETLLKQADPGQRRLLLEHNPSDQHISSVAIKQHVMLVFTDLVFNRTHRPVRVMEFPFIRVLTDAQIASLVLAHTEMRTTAGYSTAEQIAVLKGVLERYEQLENAVTSLHDMRSGFVREGYRVSYLAHLNEARSSLEAQLANLILAQEKIAPQPALDKAKRQKAATRRVIKTADKKSLVGDVRAQQPDEPGNYVDITDPLTNTIIASYHEHASEGVWKIVEPASVPTKTPAPVVRSLKRIRAHAQAIKDERQGIDERIRYQQRKLRDPEQREVVNPYDWDVMLSQHAAKFKALAEELKNATDESAIALRKSYDDEAIAATEQARQRCAEGYLLQRPKAAKIDYLWTHGFVDINLVKKRVPLKAGDYLTEYAIRDKRKIKAGMRQEDADLWYAHFHYSSVEQPVSKPDFGHLKTPAERLFTRKELMEQARANNRSVINLEKALVEAPLDQKLFLGLEV
>NZ_CP023969.1|WP_032892193.1|5495778_5495997_+|DUF2970-domain-containing-protein
MDDPIDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFVLLGILFTAVFALTLFGIVKLVLHLAGV
>NZ_CP023969.1|WP_098951806.1|5495993_5497061_-|ABC-transporter-substrate-binding-protein
MLKVLMACVWLLGSAYGAIAQAASVVFLNPGLSSETFWVSYAQFMQAGAKDLGLDLRVRYSERDNQTTLAHAREALLGTERPDYLVLVNEQYVAPQIMRMAQGSGVKLLIVSNALTPNQVQLLDAYNNTGLIGTMVADDEQAGYLMLTDLLRQHGPVAAGTTLDLLAFSGAKTTPVAQLRVQGMQRALAEHPEVRLRQLVYGEWSRQRAFEQATQLFKRYPQTALVWSANDEMALGAMQALQDSGRVPGKDVLFSAANSSPQILAARLDGRLSTLVAGHFTLGGWAMVLIHDEAKGVDIGARGGRNRQQALFQLIDAAQARRLSGPLPSVNFRALSAVGKPASYRYPFSLQLLLR
>NZ_CP023969.1|WP_003190712.1|5497487_5499146_+|nitrite/sulfite-reductase
MYVYDEYDQRIIEDRVKQFRDQTRRYLAGELSEEEFRPLRLQNGLYVQRFAPMLRVAVPYGQLTSRQTRMMAKIARDFDKGYAHISTRQNVQFNWPALEDVPDILAELATVQMHAIQTSGNCLRNVTTDQFAGVAADELIDPRPWCEIVRQWTTFHPEFAYLPRKFKIAINGSTSDRAAIEVHDIGLEPVYNAAGELGFRVLVGGGLGRTPVVGAFINEFLPWQDLLSYLDAILRVYNRYGRRDNKYKARIKILVKALTPEVFAQKVDAEMEHLRGGQTTLTEAEVHRVAKHFVDPEYKALSNQDAELAALDQQHPGFARWRTRNTLAHKKPGYVAVTLSLKPTGVAPGDITDKQLDAVADLAERYSFGQLRTSHEQNIILADVEQSQLFTLWGELREGGFATPNIGLLTDIICCPGGDFCSLANAKSIPIAESIQRRFDDLDYLFDIGELDLNISGCMNACGHHHVGHIGILGVDKKGEEFYQVSLGGSASRDASLGKILGPSFAQEAMPEVIGKLIDVYIEQRTEDERFIDTYQRIGIDLFKERVYAANH

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Crispr_ID: NZ_CP023969_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_22

5538153-5538267

Orphan

Consensus_repeat	Method
GCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTGGATTGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_22

>merge|NZ_CP023969|22|5538153-5538267|CRISPRCasFinder
GCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTGGATTGCGGAGGTATCAGGTAGATAGGTGTCGGCTGTCAAGCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTTGATTGCGG

>NZ_CP023969|22|21|5538153-5538267|CRISPRCasFinder
GCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTGGATTGCGG	AGGTATCAGGTAGATAGGTGTCGGCTGTCAA
GCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTTGATTGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_003190688.1\|5533537_5534557_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
NZ_CP023969.1\|WP_098951830.1\|5534558_5536160_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226641
NZ_CP023969.1\|WP_098951836.1\|5541852_5542989_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP023969.1\|WP_098951835.1\|5539722_5540916_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP023969.1\|WP_003190694.1\|5525150_5525909_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_CP023969.1\|WP_032892225.1\|5541047_5541863_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023969.1\|WP_056784402.1\|5537030_5537618_-\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023969.1\|WP_098951827.1\|5525974_5526742_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
NZ_CP023969.1\|WP_098951833.1\|5538380_5538872_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023969.1\|WP_098951828.1\|5528797_5530627_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP023969.1\|WP_032892223.1\|5539201_5539600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892217.1\|5530623_5532462_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP023969.1\|WP_098951840.1\|5545736_5546747_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381378
NZ_CP023969.1\|WP_020301567.1\|5526840_5528241_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
NZ_CP023969.1\|WP_089042545.1\|5544927_5545725_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP023969.1\|WP_032892218.1\|5532462_5533536_+\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
NZ_CP023969.1\|WP_098951838.1\|5542985_5543789_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP023969.1\|WP_032892228.1\|5544491_5544902_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP023969.1\|WP_032892220.1\|5536195_5537089_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP023969.1\|WP_032897475.1\|5543948_5544446_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223718

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_003190688.1\|5533537_5534557_+\|ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP023969.1\|WP_098951830.1\|5534558_5536160_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226641	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only].	0
NZ_CP023969.1\|WP_098951836.1\|5541852_5542989_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.58109e-39
NZ_CP023969.1\|WP_098951835.1\|5539722_5540916_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.605e-53
NZ_CP023969.1\|WP_003190694.1\|5525150_5525909_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.7512e-05
NZ_CP023969.1\|WP_032892225.1\|5541047_5541863_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.1668e-28
NZ_CP023969.1\|WP_056784402.1\|5537030_5537618_-\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	9.38864e-24
NZ_CP023969.1\|WP_098951827.1\|5525974_5526742_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	1.15825e-145
NZ_CP023969.1\|WP_098951833.1\|5538380_5538872_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.08763e-11
NZ_CP023969.1\|WP_098951828.1\|5528797_5530627_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP023969.1\|WP_032892217.1\|5530623_5532462_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP023969.1\|WP_098951840.1\|5545736_5546747_-\|aldo/keto-reductase	gnl\|CDD\|381378	cd19152, AKR_AKR15A, AKR15A family of aldo-keto reductase. The AKR15 family includes Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD), Pseudomonas sp. D-threo-aldose 1-dehydrogenase (FDH), and similar proteins. PLD (EC1.1.1.107) catalyzes irreversible oxidation of pyridoxal. FDH(EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose. FDH (EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose.	3.82158e-146
NZ_CP023969.1\|WP_020301567.1\|5526840_5528241_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	3.73571e-132
NZ_CP023969.1\|WP_089042545.1\|5544927_5545725_-\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.37959e-49
NZ_CP023969.1\|WP_032892218.1\|5532462_5533536_+\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP023969.1\|WP_098951838.1\|5542985_5543789_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.05828e-81
NZ_CP023969.1\|WP_032892228.1\|5544491_5544902_-\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	5.9252e-44
NZ_CP023969.1\|WP_032892220.1\|5536195_5537089_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.78579e-27
NZ_CP023969.1\|WP_032897475.1\|5543948_5544446_+\|AAA-family-ATPase	gnl\|CDD\|223718	COG0645, COG0645, Predicted kinase [General function prediction only].	3.91896e-15

>NZ_CP023969.1|WP_056784402.1|5537030_5537618_-|LysE-family-translocator
MSLILSMAAFALATSITPGPVNVVALSAGARFGFVASQKHVLGAAVGFTLLLVLIGLGLHEVLVRWPILIRLIRWGGVAFLLYMAWKLAVDDGRLDADGAQTAPSMLYGAIMQWLNPKAWLACVAGMGLFVADGDAAQVWLFAALYLVICYLSVACWAYAGTFLRRYLHNPKGVRLFNRSMAALLVASVGYLLMA
>NZ_CP023969.1|WP_032892220.1|5536195_5537089_+|AraC-family-transcriptional-regulator
MSPSPTARPADAPRFWRDERLPFIEARTIADGRKVTYTRHAHEHFSIGAITTGCSYYHYGAQTFDISAGTVVLMNPGDVHACNPIHDQPWSYHMLYLDTPWLTDLQYQLGFSTDQGYRPFDTPHTRDTALYHGLLDLYRTLVDEQADLLQKQSALVSYFTEVQQRLNPSLAPVREVNHKLERAADYIRAHCTQALKLEDICQAADLSPSYLIRAFKQYYGLTPHAFMVNRRIQFARSQLRNGALIADVALAAGFADQAHFQRTFKQHFAATPGQYRENLKPSANNPHWPPATRPLSG
>NZ_CP023969.1|WP_098951830.1|5534558_5536160_+|ABC-transporter-ATP-binding-protein
MNPDNLIEIRDLSVEFVTGEHHHRVVNHVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIEYSGQNLLTLKEKTLRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKGLTGKVATQRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQQGCIVEQADCETLFQSPQHPYTQELLAAEPSGGPANNEVGPPLLEVDDLKVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGGIRFEGQQLDRLSQQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQEAAIIAALKEVGLDPESRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYLFISHDLAVVKALSHQLMVVKQGQVVEQGDARAIFADPQHAYTRQLLKAAFLVPA
>NZ_CP023969.1|WP_003190688.1|5533537_5534557_+|ABC-transporter-permease
MNLSPLNRRRFERFKANKRGWWSLWLFLVLFVLSLGAELIANDKPLAVHFDGGWYFPALKRYPETTFGGEFPLEANYKSPYIQELLKAKDAWTLWAPIPFSYQSINYDLKVPAPAPPSSVNLLGTDDQGRDVLARVIYGFRVSVLFALTLTILSSIIGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTMTFLPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGMSAFAVLAIMLSLLVFIGESARDAFDPRK
>NZ_CP023969.1|WP_032892218.1|5532462_5533536_+|microcin-C-ABC-transporter-permease-YejB
MLAYIARRLLLIIPTLFGILLINFVIIQAAPGGPVEQMIAKLEGFDGATSRIAGGGAEVAVAGSSYRGAQGLDPALIKEIEKMYGFDKSAPERLWIMVKNYARLDFGDSFFRDAKVIDLIKEKMPVSISLGLWSTLIMYLVSIPLGIAKATRHGSHFDVWTSSAIIVGYAIPAFLFAILLIVVFAGGSYFDWFPLRGLTSNNFDELSWGGKILDYFWHLALPVTALVIGNFATMTLLTKNSFLDEINKQYVVTAKAKGLTNRRVLYGHVFRNAMLLVIAGFPSAFIGIFFTGSLLVEVIFSLDGLGLMSFEAAINRDYPVVFGTLFIFTLLGLIVKLIGDLTYTLVDPRIDFASREH
>NZ_CP023969.1|WP_032892217.1|5530623_5532462_+|ABC-transporter-substrate-binding-protein
MMSLRTTLLASLLLCTAAHAAPQHALTLYNEPPKYPADFKHFDYVNPDAPKGGTFRESAMGGFDSLNPYISKGVPADNLPLIYDTLATQSLDEPITEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVVFTFQTLIKEGNPLYRNYYADVDEVVAEDPLRVLFKFKRTNNRELPLILGQLPVLPKHWWATRDFSKGNLEIPLGSGPYQVAEVKPGRMIRYERVKDYWAKDLPVNKGFYNFDTRITDYYRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIPAVKEGRLIKEEIPNGNPTGMQGFVFNMRKPMFQDVRVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGLPGPDELAILEPLRDKIPGEVFTQAFEPSHTDGSGMIRTQQREAYQLLQEAGWKIVDDKMVDSTGKPVTIEFLLAQTEFERILLPFKRNLADLGIDLVIRRVDVSQFINRLRSRDFDMLVGSFPQSTSPGNEQREFWKSSSADKPGSRNYMGLKDPAVDQLVEELIDAGSRQSLIAHARALDRVLQFGYYVIPNWHIKTFRVAYWDHLGHPKVSPRYDVGTATWWAKPDVKPAVSLDTTQNADAASGGN
>NZ_CP023969.1|WP_098951828.1|5528797_5530627_+|ABC-transporter-substrate-binding-protein
MKRPLLLLISLALSFAANATITESHGYAQFGTLKYPAKFTHYDWVNPAAPKGGTLRVMAFGTFDTLNPYTFKGSSPVSTANFLQYGVNELNEPLMVGTGQYAPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPEARFHDGKPITADDVAFSYRTLLTEGHPQYRTNLQEVARVDILNPHRIRFVFKRAGNPLLILRLGELPVLPQHYWKNRDFKATTFEPPLGSGPYRITKVAPGRQLVFERVKDYWGKDLPVNQGFYNYDKVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWATGYNFPAVNRGDVIKAQIAHQIPTQSQGLFMNTRRPAFSQAKVREALGLMFDFEWTNRTLFSSAYKRSVSYYPNSEFSATGLPVGHEWLMLSPYRDQLPAALFTQPFNLPHTDGRGIPRETLRQALALLSEAGWKLSGQRLLDKNGQPLRLEILLVNPNLERILQPYVENLTRIGVDARLRTVDRAQYKQRLDQFDFDMILMTLSQTLSPGLEQWQYFHSSQAAIKGSKNYAGIANPVVDHLLDQLLAAQTREEQLAAGRALDRVLLWQHYSIPNWYLNYHRLAYRNRFAFVTTPPYSLGLSAWWLKASEKAQ
>NZ_CP023969.1|WP_020301567.1|5526840_5528241_+|transglycosylase-SLT-domain-containing-protein
MSSSIRKSISSDALTRLAQAVAVAVSATLAGCQSTNYAAQSTVQPKPNLAAKIKQKPIWLSEKPSPEVPQDVWERMRRGFQLQDGVGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQFIPSTGRYFNLRQTRAYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQETKDYVPKFLALSQVVLAPEAYGVNLNPIANTPYFEVVEVKQSMDLSRVAALAEIDEDELFQLNPALKQRTTLDGPQHLLVPTSKAQLLTSTLSTMKPEELLSMRPKKPVFDEVETKAVAGRTRSYKVRSGDNLTLIAKANKVDVHDLQRWNKLNGQALKVGQTLVMQDTRKVAAKKPVQYKVKKGDSLYMVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSGPR
>NZ_CP023969.1|WP_098951827.1|5525974_5526742_+|hydroxyacylglutathione-hydrolase
MIQISALPAFTDNYIWLLQDPATQRCAVVDPGDAAPVLAWLKQNAAWTLSDILVTHHHHDHVGGVEQLKNATGAKVYGPANEKIPARDVALHDNDRINVLGWDFDVYAVPGHTLGHIAFYHQGVLLCGDTLFAAGCGRLFEGTPEQMYSSLERLAALPADTQVYCTHEYTQSNLKFAQAVEPHNADITERVENVAQLRARGEMTLPSNLALEKLTNPFLRTAETSVKQKADERNGRDNRSGAEVFASLRAWKDKF
>NZ_CP023969.1|WP_003190694.1|5525150_5525909_-|methyltransferase-domain-containing-protein
MTDKAFAQADPEWLALISAAREWLSGPIGQFLLEEERRMLEDELGRFFGGYLVHYGPSADTPPSAPQVQRNVRLGAPLPGVEIVCEEQAWPLSEHAADVVVLQHGLDFCLSPHGLLREAASSVRPGGHLLIVGINPWSSWGLRRVFAHDGLRQARCIAPSRVGDWLNLLGFALEKRRFGCYRPPLATAKWQGRLAGWERRAGAWQLSGGGFYLLVARKIVVGLRPVQQVRREPIGKLVPMPLAKVNREQREP
>NZ_CP023969.1|WP_098951833.1|5538380_5538872_+|GNAT-family-N-acetyltransferase
MPTLTLRNALPTDAARCFEIETTAYEGDEAATLEKITTRIAQYPEGFLILEEDGAVVGFINSGCAHEVVMSDEAFKELVGHVAEASNVVIMSVVVDPAHQGKGYAKRLMAEFVQRMQAMGKRSIHLMCKEQHVPLYRTMGYTYVRPSPSDHGGMAWHEMVRML
>NZ_CP023969.1|WP_032892223.1|5539201_5539600_+|hypothetical-protein
MSSISDSIPFVPAYQPAGKHPIDNDVPRTNPLDKQAGEDAEVSNGKGGWKSIGNATRDHANRTRLDRNFLPSDKKIVDDSRVNTHIQYHGSGTLPAFSTSDYKALDDSPSNIHREPIDFEIKPDGIGGWTKA
>NZ_CP023969.1|WP_098951835.1|5539722_5540916_-|YgcG-family-protein
MIVLVRQSVFSLLALVFSSLLIAAQADTSPIGVALDQRVIDLTNTLDSGTAERLKQQLADLEQRKGAQVAVLLVPTTGSAGIEDYANQLFRAWKLGRQDVNDGLLLVVAKNDRKVRIEVGYGLEGIVTDLLAHRIIEERITPAFRQGDFAGGIEQGVNALVVLVDGGDLPERAGPGLTPQFIAILAAFILGALTGVLIAAGKLHWRRALIIAVAATLLLALLAGGRDWPMFLFVVPLTLLIGGAIFGALWQVRTLFYGVIGLLAYILGLVVANQYVDVSFTHWLLWPLGVLIVLGLYLVLLLIMRETWRTSRAGFAVRLLAVMAVYGVAGRVMDGDRDAWLLAFPIASFVALIIFGKVGEGSGSGGGSSSGSSGSSSSSSSSGGGGSSGGGGASGSW
>NZ_CP023969.1|WP_032892225.1|5541047_5541863_+|alpha/beta-hydrolase
MDLSHRNNVHVMGNGPSTLVFSHGFGCNQAMWNALAPHFLERFRVVLYDLVGAGLSDLSAFDKAKYSRLDGYAHDLNEIIDAYAQGPVILVGHSVSAMIGTLADRFIPGRIAAHVMIGPSPRYIDTDEYVGGFQHDDIEDLLDTLDSNYLGWSSAMAPVIMGAPTQPHLSEALTDSFCRTEPDIAKQFARVTFLSDNRQDVFGLTTPVLILQSTEDLIAPVAVGEYLHAVLPNSTYCLVENVGHCPHMSAPQACATAMDRFLAPWAAADAR
>NZ_CP023969.1|WP_098951836.1|5541852_5542989_+|PAS-domain-S-box-protein
MPADSLFDSAACALAVTQEDGTILHVNPRLCDWLGFTAAQLLGRRFQDLLAMGGRIFYQTHLAPMLRMHGSVTEVKLDIRHCDGHKVTVLLNANRRQQPDGVVYDLALFGTTDRDKYERELLNAHKQAEALLQEKTATELALQQAQAELSEAYAIAQRRALFAEQMVAIVSHDLKNPLTAIRMASDFLQRGERTAKERQLLGHIGQSSERAHRMIADLLDFTQARVGQGIIIKPQPLDLHSVIHSSVDELRVAFPKATLVHHAEGQGDACLDADRVQQMVGNLVANSVAYGDLLQPITITSRLGDNTCEVAVHNHGPAIPQALLAGLFEPMTRGTDQGSDVRSVGLGLYIVRELARVHGGDVAVSSCASAGTTFTVKF
>NZ_CP023969.1|WP_098951838.1|5542985_5543789_-|diaminopimelate-epimerase
MTLPFVKMHAHGDDFIIVDRRGEDNPITAQIARYLGNRRFGIGFNQLAVVLDCEEAAARVQFWNPDGTRLHTCGSATRGVADRLMHEAGTDTIVLRSDRGLLRCTRADGQRVSVDMGPPSLDWASVPLDRAMDTCVLPIDGQPAACSMGNPHCTFFVEDVTALDIEAMGPTLEVHPLFPARTNVHFVQVLDRSHIRLRIWERGGGVPQGSGSCCCAAVVNGIRRGLLDERVEVQCDGGAVTVQWDGQGGVILTGHVEPIMQGTAYLY
>NZ_CP023969.1|WP_032897475.1|5543948_5544446_+|AAA-family-ATPase
MLIVFSGLPGSGKTTIARELARQLGAVYLRIDVIEQALREAGVLAGDVGASGYAVANALALSNLRLGQRVIADCVNPVKESRDAWQAVATAAGVALINIEVVCSDQQAHRLRVEGRVGDIPGLVPPTWQSVQVHEYEPWEAPPFRLDTAQLTPAEAVAAALLHLG
>NZ_CP023969.1|WP_032892228.1|5544491_5544902_-|SRPBCC-family-protein
MATASSVIEIAVSADQVWQLIGGFNSLPDWLPFIAKSEPSEGGRVRHLTAADGGTIVERLQTFDNVARTYSYTIETSPFPVSAYLSTLQVEALTDTSAKVTWSGVFTPAAGTTEAQAEELFTGVYEGGLEALRSNF
>NZ_CP023969.1|WP_089042545.1|5544927_5545725_-|SDR-family-oxidoreductase
MKIDVSGKVAIVSGSTAGIGLGISQALAQSGATVVVIGRDAGKVDDALASIRQAVPAAQLRGVVADLGTVEGAQKLFAAEPRADILVNNLGIFDAVDFFDAPDSEWARFYEVNVISGVRLARHYVPGMVEQGWGRVIFVSSESGVATPADMINYGVTKSANLAVSHGLAKRLAGTGVTVNAILPGPTFTDGLEHMLKDATAESGRSARDEADVFVRHARPTSIIQRAANVDEVANLVAYIASPLSSATTGAALRVDGGVVDSMAI
>NZ_CP023969.1|WP_098951840.1|5545736_5546747_-|aldo/keto-reductase
MSLKDTLPGVLGFGTAPLGNMFRAIPEEEAQATVDAAWSQGVRYFDTAPFYGSGLSEMRLGQALSNYHRDDYVLSTKVGRVILDEVEETARDLGEKSGVFEHGRPNKIINDYSADATLRSIEDSLTRLQTDRLDIVWVHDIAQDFYGDQWLEYFNQARTGAFKVLTRLREQGVIKAWGLGVNRVEPCELTLDLAEAQPDGFLLAGRYTLLDHDRALQRLMDAAHAQQVEIVVGGPYSSGILAGGAHFEYQQASPAIMAKVEQIKAIAQAFGVSIKAAALQFSLAHPAVAAVIPGASRPGRIAEDVAALSEQIPAAFWQALREARLISDGAPLPLSR

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Crispr_ID: NZ_CP023969_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_23

5576977-5577072

Orphan

Consensus_repeat	Method
GCAAGCCCGCTCCCACAGTTGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_23

>merge|NZ_CP023969|23|5576977-5577072|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGATAGTAGGGTGTCAGGTAGATATGGCCCGGCTGTCAGGCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTGGAT

>NZ_CP023969|23|22|5576977-5577072|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGAT	AGTAGGGTGTCAGGTAGATATGGCCCGGCTGTCAGGCCGCCATCGCAG
GCAAGCCAGCTCCCACAGTTGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098951858.1\|5561201_5562305_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP023969.1\|WP_169918634.1\|5579179_5579851_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP023969.1\|WP_014718112.1\|5577111_5577582_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023969.1\|WP_098951870.1\|5577705_5578950_+\|methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|181005
NZ_CP023969.1\|WP_098951875.1\|5593649_5594204_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183232
NZ_CP023969.1\|WP_032892248.1\|5573930_5574800_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP023969.1\|WP_032897482.1\|5591765_5593577_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|235131
NZ_CP023969.1\|WP_098951864.1\|5570255_5570615_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951880.1\|5596286_5596841_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP023969.1\|WP_098951873.1\|5579965_5591353_-\|autotransporter-associated-beta-strand-repeat-containing-protein	unknown	unknown	gnl\|CDD\|226973
NZ_CP023969.1\|WP_098951877.1\|5594758_5595475_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223477
NZ_CP023969.1\|WP_098951860.1\|5562307_5565382_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP023969.1\|WP_098951882.1\|5596992_5598312_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340925
NZ_CP023969.1\|WP_032892247.1\|5573228_5573861_-\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023969.1\|WP_098951862.1\|5565510_5570259_+\|RHS-repeat-protein	unknown	unknown	gnl\|CDD\|225750
NZ_CP023969.1\|WP_098951879.1\|5595485_5596241_-\|precorrin-6A-synthase-(deacetylating)	unknown	unknown	gnl\|CDD\|236218
NZ_CP023969.1\|WP_032892249.1\|5574827_5575010_-\|rubredoxin	unknown	unknown	gnl\|CDD\|224687
NZ_CP023969.1\|WP_044273551.1\|5572090_5573149_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|182329
NZ_CP023969.1\|WP_098951866.1\|5570812_5572042_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|235710
NZ_CP023969.1\|WP_098951868.1\|5575168_5576605_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951858.1\|5561201_5562305_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.32609e-46
NZ_CP023969.1\|WP_169918634.1\|5579179_5579851_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.65496e-08
NZ_CP023969.1\|WP_014718112.1\|5577111_5577582_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.35456e-47
NZ_CP023969.1\|WP_098951870.1\|5577705_5578950_+\|methionine-gamma-lyase	gnl\|CDD\|181005	PRK07503, PRK07503, methionine gamma-lyase; Provisional.	0
NZ_CP023969.1\|WP_098951875.1\|5593649_5594204_+\|hypothetical-protein	gnl\|CDD\|183232	PRK11615, PRK11615, hypothetical protein; Provisional.	3.97351e-08
NZ_CP023969.1\|WP_032892248.1\|5573930_5574800_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	9.06824e-20
NZ_CP023969.1\|WP_032897482.1\|5591765_5593577_+\|cation:proton-antiporter	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP023969.1\|WP_098951880.1\|5596286_5596841_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.33643e-22
NZ_CP023969.1\|WP_098951873.1\|5579965_5591353_-\|autotransporter-associated-beta-strand-repeat-containing-protein	gnl\|CDD\|226973	COG4625, COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain [Function unknown].	1.10225e-46
NZ_CP023969.1\|WP_098951877.1\|5594758_5595475_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	6.26891e-37
NZ_CP023969.1\|WP_098951860.1\|5562307_5565382_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP023969.1\|WP_098951882.1\|5596992_5598312_-\|MFS-transporter	gnl\|CDD\|340925	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters. This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.68475e-122
NZ_CP023969.1\|WP_032892247.1\|5573228_5573861_-\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	4.9736e-32
NZ_CP023969.1\|WP_098951862.1\|5565510_5570259_+\|RHS-repeat-protein	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	6.68201e-43
NZ_CP023969.1\|WP_098951879.1\|5595485_5596241_-\|precorrin-6A-synthase-(deacetylating)	gnl\|CDD\|236218	PRK08284, PRK08284, precorrin 6A synthase; Provisional.	1.32454e-155
NZ_CP023969.1\|WP_032892249.1\|5574827_5575010_-\|rubredoxin	gnl\|CDD\|224687	COG1773, COG1773, Rubredoxin [Energy production and conversion].	2.45064e-17
NZ_CP023969.1\|WP_044273551.1\|5572090_5573149_-\|diguanylate-cyclase	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	1.79246e-79
NZ_CP023969.1\|WP_098951866.1\|5570812_5572042_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|235710	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed.	0
NZ_CP023969.1\|WP_098951868.1\|5575168_5576605_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.02368e-108

>NZ_CP023969.1|WP_098951868.1|5575168_5576605_+|PLP-dependent-aminotransferase-family-protein
MFVSAIAFVEGTPKVQQIVEAFSHAIEKGEWAPGSKLPSVRELTQILGVSKFTLNEALDRLRGRHLLTSSQGRGYFVAMDSTRPASATWVDLLPQDLLSVLRRPLATASGELRPGGGHLPEDWLNGEAIRQAMRSVVRAPSLRIAGLGTPAGLLPLRQALQQKLHGEGLSVPVEQIITTPNTVQGLDMLMRLLARPGDTVLLDAPCYFNFHANLALHGVKVITIARRPDGFDFTALEQLLAEHRPSLYLTTSVLHNPTGHSFSPSQAFRLLQLTQHYHCHIVEDDLYGDLHPNPPPRLAAVAGLDQVTYLSGFSKILSANTRVSYVVAAPQLAANLTNMKLMSGGVTSELFEQIVYRMLSEGSYAKHRKRMVQRLMEAGGRVEQWLKRCGCELPMAYEGGMFIWARLPPGVNGELLAQEALKRSMVLAPGALFGYDPAHRDSMRFNVAHSDEPRVQRVFEALLLHGVAQKSKSPPTPT
>NZ_CP023969.1|WP_032892249.1|5574827_5575010_-|rubredoxin
MKTYMCAPCGFMYVEELGIPEDGIPAGTPWEEVPEDWACPDCGVTKADFMAINLPELQEA
>NZ_CP023969.1|WP_032892248.1|5573930_5574800_-|sugar-phosphate-isomerase/epimerase
MHSKLINATVPFCTGVAHQKYLGAEKGLQTAIEGDCTHWYIDGSLFGEMVDDWTDARIESLQAQIAATGVKPVFHGNFKAPLGSDVEAFRSAAVEYVKKEIDIASRLGAPLIIHGGCIVEPKMVLMAKKVALEHYLKSVQELALYAEAKGTDIYLENLSNYVNYRPFHYIFTHEAEYAFVFERLQAHSNVYFFLDAGHANIENGLPAEVVRKYHHLIKGISFSNNNGVQDQHFGIHDGNCDYADVLQAIVETNWKGLVAFETRNQTAKAALADLAVMYRDSLTTEIAVA
>NZ_CP023969.1|WP_032892247.1|5573228_5573861_-|LysE-family-translocator
MTSALTLSSFLYFLLFCATMTFSPGPMTLLLLSLGLKDGLRSSIPAQVGASVSYLISILIFAVGFSELIKGNLAITQTIQFVGVAYILYLAYKQWTSSGVSINNAGTVEGARSLFGKGLLTGFSNPKTIIMFSAVFPQFAGAGEHSSAADIAILGLTFLLLQFASGCLYCYFGQRIKHVLENPKRRVLLQRITAVLLLGVALMLARGFSH
>NZ_CP023969.1|WP_044273551.1|5572090_5573149_-|diguanylate-cyclase
MPAVGGKGLPLALRLYKSRLLGLTLGFVCVAFGMYPLNPPLWVWAWMLINAFAWPHLAFQCSLRSANTLRSERRSLLFDSFCGGFWVGAMHFNPLPSVTTLSMMSMNNVAIGGPRFLFAGWAAQALGLGTALLLFTPGFIAVTTQAQLYACLPILMLYPLALGWICYRQAVTLARHKRELLALSRTDSLSGLLNHGAWKDHLDLEFQRCRQGPAGAAIALIDIDHFKTINDTYGHVTGDIVLRQLSKVLRQNLRTTDLAGRYGGDEFCVILPDMPLNRATEVMEALRGRFNALAYAQDPTLRVSLSIGLAPYQPSHADSISWLNDADQALYEAKSSGRNRVSSVQGSWLRSV
>NZ_CP023969.1|WP_098951866.1|5570812_5572042_-|M20/M25/M40-family-metallo-hydrolase
MFFSFPQTLLAATLALSFSLPAYSAEPHKQIQQQAEQYKAEALKLLERLVNIDSGSGYEPGLTQVRDIAVDELKQLGFTIERVPDKAANNSHVIATLKGTGKAKILLMAHMDTVFKEGSAAERPFHIKDGRAYGPGVMDDKGGIVAGIYALKVLKSQGFKDYAQITFLLDASEETGSDAASELIRNTAKGHDVTLNLEPGRPADGLVVWRKGSATAVVEVKGKAAHAGVAPELGRNAAMEAAHQILQLGKLGDEDKKTTINFTVLKAGDRTNVIPDQATAKADVRAALPEEFDRIEKDLARVSANKLIPETEVKTSLQRGLPPMPQTAESDKLVAIAQGIYGELGRKLTIEGSGGAADASLSAGVGTPTLDGFGIVGGNIHTPEEYAEVESVAPRVYLLSRMIMELSKR
>NZ_CP023969.1|WP_098951864.1|5570255_5570615_+|hypothetical-protein
MKLKPNLSIIQGLLFTYCIENTRSVDREELITSINVNHHEELTWLFNTLTKPEFIKYKQDEREWHINTLQHFLSTDENFESVFYLFDTYFEDEIIDNRAFMKTLLECLIRYHAEAKTDK
>NZ_CP023969.1|WP_098951862.1|5565510_5570259_+|RHS-repeat-protein
MTQAAQVTFIEHELDGFHQSLVEYRQQMGAWYSRALDTVSHAADMPSLLGMDRVLRAGDAQQSVSLGDADFATVARCPAGGVLKIQSRFESAYDVPIGNIPVEVIGLDDGSSKVILLDEHGEGSHDCAAGGRYQVRVQGGVSAQQVDALFASYAGLTADLEQWLREQWQGFKPHWQQSPASAIGSGVLAGSWAAIRDAWDSVKQVQAMLEDPLKYVEQLGSEAARLAQIATDAPRVMERAMLLASDEAALYLLLRTAMIWLEALPPSEVAQAAAGFMVSLLIDLVIGAVLTIALPAAGVAYLSMRLVKYGARVLQSAVGFVTGVLTILTKFMQAVDRYKAVAVRGVVGGLKQGTMQMRWRARQNAVLTQKERVDDVPAVASNPKGDAAAPADKTVTQGCPVSMVTGEELLTLTDGALDGILPFEWTRLYRTSAVEVDCGLGFGWSHALAHRLVVSGDSVVWTDHENRSTALPLPTDSRPAITNSLAEAAIYLGPAPDELVLAQASRFYHFRDGVLTTISDAYDNRLRLCRDRSGRIERLDNGAGRSLLLRYELGRIVAVDYQVHRAKGREPYVWETEQNVVSYAYDEHGRLVCATNAVGESERYRYDDQHVILERQLAGGASFFWEWEGAGKAARCVRHWASFSQMDTRYAWGDDGRVTVHNADGSQEVYVHDQRARLVQRIDPDGAQHYKSYDDKGRLTVEQDPMGAVTAYQYDDAGRLVALFPGNDEPTAYEHDNGFVRVVRRGEAVWKYERNDQGDVIRKTDPDGHSTDYSYNKQGQLTGVWYPDSSCHRLVWNERGQLLEEQLPHGGIRRYRYDDLGRQIAREDEHGAQTVYEWDSVGRLIRLVLPGGATREFSYNPYGKIIAERDELGHVTRYEYADGLHLISRRLNADGTQVKYRYDNARLLLTEIENEAGETYQLDYHPNGLIRQETGFDGQRTAYAYDLNGNLLEKTEYGDDGSQLITRYQRDHAGRLVRKTLPDASVVDYAYDRQGNLLSVEDGHWALAYEYDRQNRLTAEHQGWGTLRYGYDACGQLKNLCLPDNNRVTFNHDKGGHLATVELNGDVLTSHLFNSGREHQRQQGQLLSHYHYDDQHRLHAHAVTQQQNHLYQRQYDYDKAGNLTRLLDTRKGEHLYRYDPLNRLTRADHSQDVQERFGHNPAGNLLMQDRPGPDIVAANRLIIQGDRHYDYDAFGNLIRERRGKGQQLITEYRYDCQHRLISITKPNGETASYRYDPFGRRISKTVDGKTTEFFWQGDKLIAEHHAERHRSYLYEPDSFRPLALLEGFGPHATTPYHYQLDHLGTPQELTSPEGEIVWSAHYRAYGQIARLDVGKIDNPLRFQGQYFDAESGLHYNRHRYYNPDIGRYLTPDPVKLAGGINGYRYVPNPTGWVDPLGLNTCPGADGCKPSTSAPNPAQSVNHGEPALPQLTRTQRQAKIDELAESNAHRRLSELEASIPGAHFLEKHGAQTSLESQLERVITARNPTTGEIERHLRGPRQGEPRPPSAATHFLSHRDQLNAIYRAQLIFKSLNLSASKQPMHMGKIVGEGYKRDGYEYRQTKKARVFLNEDGQPITAFTDLE
>NZ_CP023969.1|WP_098951860.1|5562307_5565382_+|efflux-RND-transporter-permease-subunit
MRGINLSELAVKHRAVTLFLLIAILVAGVFAFGKLGRAEDPSFTVKVMTITAAWPGATAQEMQEQVADRLEKRLQELDYYDRVETIAQPGFVSMRMTFLESTRPSEIQALFYQTRKKLSDEAAQLPKGVIGPFFNDEYSDVYFALYALEAEHLPHRQQVQMAEQLRQSLLNLPGVKKVNILGEQAQRVFVEFSYERLATLGIKPEQIFAALAAQNAVAPSGFVETAGARAYIRIDGAFDSLALIENVPLQVNGRVLRIADVATVSRGYEDPPSYRIRHQGDPALMLGVIMEKHWNGLELDKSLQAEEARIQADLPLGVNFAKVSDQAKNISLAVNEFMLKFFVALAVVMLISLLALGFRVGLVVAAAVPLTLSIVFVIMLVTGREFDRVTLGALIISLGLLVDDAIIAIEMMVVKLEEGFDRIHAATYAWSSTAAPMLTGTLVTIIGFLPVGFARSGAGEYAGNIFWIVGFALISSWLVAVVFTPYLGVKMLPQIKPVPGGHDAIYAGRYYQKLRRLVEACVRGRWLVTGLVVAAFVLCGLGMAVVKKQFFPDSDRSELILEVYMPPGSAFKSTEAVAAQVEKALLQEPQTSMVDTYVGGGAPRFFLSLNPEMPDPAFAKLIVQTPDSHARDALKLRMRERIAAGEFPSARVRVTQLVFGPPVPFPVVFRVSGPDLNVLRGLSEDVRQVVAGNKLTRDTFLEWGERASGYRLVLDQDRLRLLGFTPDEVKSQLNALLSGNPITEVREGNRTVSVVARAQGSQREDLGNLNNMTLTNSAGTSVPLAQVGHFQAVMEEPILKRRDRATTVEVRADIIDGVQPPDVEMAVYKDLQPLIAKLPSGYKIDIGGPVEESAKANVALAALFPIMILLTLTVIMFQVRSFGVMFMVFATAPLGLIGAVPTLLLFNQPFGFNAILGLIGIGGILMRNTLIFTDQIRQNQDYGMAIREAIIEATVRRARPVILTALAAALAFIPLTLSVFWSSLAYVLIGGVLVGTVLTLLFLPALCSLVLRDKVAEMSHVTVG
>NZ_CP023969.1|WP_098951858.1|5561201_5562305_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MPPLPLRLLTPLALLMILNGCNSKADTAEAPVSRPVLAAKVEAAGTQQSAYTGVVAARTESNLGFRVSGKVIERKVDPGQHVSRGDTLLVLDIGDFELALRSAKNRVNAAEAQLRQRRDDENRYQRLASTGAVSRQIFDQSATNLRVAQAELAAAQSDASQIENRRTYSVLKADGDGIITDVLADRGQVVAEGQIVARLAHDGAREAIVNLPENRRDLAAQKALAFPFGAPDQAVTATLRELSASADPVTRTYRARYVLQGSVERFALGSTITVRLQGNGQPLQTRVPIGALQDAGQGTGVWLIGDDQKISFAPVKVASLGQEDALLDSGVTPGQTIVALGAHLLHSGDTVRLLPAQALALNRQQDQ
>NZ_CP023969.1|WP_014718112.1|5577111_5577582_-|Lrp/AsnC-family-transcriptional-regulator
MPIKLDRTDKALLNALQGNARLTVAELAERVALTTSPCWRRVRTLEESGVISGYQAILSPKALGYGVTAFVSIMMESHTQEIARAFEQRLLAIPEIVACHNVSGRYDFLLEVVAKDLESFGEFAREVLQTLPCVKEIYSSFSYKSVRPLRVIPLPG
>NZ_CP023969.1|WP_098951870.1|5577705_5578950_+|methionine-gamma-lyase
MHTKHTSFGFSTRAIHHGYDPVDHHGALVPPIYLSATFAFPTVEYGAACFAGEASGHFYTRISNPTLALLESRMASLENGEAAVAFSSGMGAIAATFWTLLRPGDEIIVSQTLYGCTFALLHHGLGEFGIKVRHVDLTDLDALQAAFSPATRMLYCETPANPNLRLIDIAAVAELAHQQPNVTVVVDNTYCTPYLQRPLELGADVVVHSATKYLSGHGDITAGIAVSNQALAQRIRLQGLKDLTGAVMSPQDAALLMRGLKTLGLRMDRHCSNAQAVAEALQAHPAVQWVTYPGLRSFPQYELANRQMKLPGGMIAFELKGGIETGQRFMNALQLFTRAVSLGDAESLAQHPASMTHSTYTPEQRAQHGISEGLVRLSVGLEDVADLLADIQQALAKCNGANLRPTTTAAYAMK
>NZ_CP023969.1|WP_169918634.1|5579179_5579851_+|helix-turn-helix-transcriptional-regulator
MNSHLFPQIGKVIASTGSRHFPRMLHDLILTQLAVDATHITQLHVSREGLGRRKISPVYTDSVAALGSEQLAAQLHLTRRKDDVRYVLSVYRSHPSESFSAQERSMLQDFSTLLLPMVEKHITALQPSLPDSPSAVPQHQGIDTLRRRIQERLVQSGLTLSNRELEVCVGLLAGRTAPELAEQLALKVNTIESYLKRAAIKLGISGRHSLLRWMYSTEDGTRF
>NZ_CP023969.1|WP_098951873.1|5579965_5591353_-|autotransporter-associated-beta-strand-repeat-containing-protein
MDRRLATAALPRISALSLAIRLGVAGLVMGLASPDVFAACSPASPTAGATVTCTGVPSLPLLLNTFSSAVNSLTVNVNAGAQLNATLGGKALTLSGNNTTLNNAGTIDPALLGLVSVLSGGVVIGNTAASVLNITNSATGIMRGTGALLGLNLASLDGMALNATNGAGGTTTIVNNGVIGSSSLLGLTLFASDTPVVAVQGGGQVNMTNNGTLTGRVALESSTTGNTFRNTGTISGGVSMGTASTNTFTAVTGSQVTNGGGIGVSLGGLIGVNLTFAPTGQVDGGAGGSNSLILENTTGVGGGSTGTGTASSANYVNFNNLAINSGTWTLLGPLVSGSTTLNGGVAQFNNNATFGSGVLTSNGGAIEATTNNLTLANLMTLGTGGLTVQGAATGLTLNGLISGSTGLTKVGTGELILSGANTFQGGTTLNAGTLTLGNAAALGTGALTVAGAGTLQSNAALTTSNAITLNANLTVDGVNPLTLGGVVSGGSGLIKEGVSSLALTGNNTYTGATALNAGSLVVGSNTALGASVLNASAGTTLDASAAVSLGNNLNLSGNLTLGGSNALTLGGVVAGLGGLIKNGPADLILNQANTYLGNTALNSGKLVIGATDALGAGTLNAAAGTTLDASTTATLTNAINLAGNLGIGGSANLTLGGTVNGAGSLTKNGTAGLTLSGNNNFLGGTTLNAGSLTVGSNTALGLGNLTVGGAATLDSTSAVALGNNIALNAGLTVGGANALTLGGVVSGAGALIKDGLANLTLNGTNTFSGGTSLNAGSLTLGAAGALGAGPLTVGGAATLDTSATFTLDNGIALNGDLTLAGNNDLNLSGVISGASALIKNGLADLTLSGNNTFTGPLNIVSGSVTTGSAGALGSTSGVDVSAGAALNLGVDSSLAGLSGAGSVAVGSGLNFTVGGVNTSSTFDGDLSGAGSLIKVGTGTLTLNAINGITGNTTINAGTLDVDGSLGSALVNVNSGGTLTGSGSLLGTANINSGGHLALGSGTTLSAAGLNMSAGASLDVALGAPSLTSLMNVGGNVNLAGDLNVSDAGGFGAGVYRLINYTGGLTGALNVNMVPLGYGLGDLLVQTSVGSQVNLVVAAPNIRFWDGSNTIANGSVDGGNGTWTAGGTNWTSADGLSNQTWGGGFAVFQGAAGTVSVDGVQTLTGMQFATDGYSLVNGTGGQLSTGSGNFAVRVDPLATATLGVEITGAGVLNKLDTGTLVLNSANSYTGGTLLNGGTLVVGSNTALGTGTLTAAAGTTLDSNASVTLGNDAVLSASLTLGGSNALALNGAISGIGGLVKNGTADLTLGGTNTFLGPVALNAGGLILASNTALGAGVLNAAGGTTLDASTAVTTTNAINLAGNLGIGGTADLTLGGAINGAGSLTKEGTANLILSGANAYLGGTTLNAGTLTLGSATALGLGNLTVGGAATLDSTAALTVGNGLVLDANLAVAGSNDLTLGGLVTGTAGLTKDGAANLTLNGVNTFQGGTTLNAGTLTLGTAAALGTGALNVNGAATLANSTPLVLANAVNLNAGLTVGGLSNNLTLAGMLAGSGSLVKTGTADVSLTGTNTFNGLFDVQSGSLTTLGNAALGVGAGVNLASGTSLNLGGSASLGALTGTGIATVGAGSTLSVGNNNLDSTFDGIVAGLGDLAKDGTGALTLGGLSVVTGDAQVNAGSLLVNGSLASANVAVGSGATLGGTGTLLGNVSIADGGHLAVNSGATLTTGSLLLNANSNLDAGLGAPATGGTALVQVNGNLTLDGTLNVTDIGGFGAGIYRLIDYTGGLTNNGLQLGSLPVNIPASDLDLQTAIGNQINLLVNGSTNVQFWDGSQTTGNGTIEGGSGTWSAGGSQWTGVNGAFNTAWTPNSFAVFQGTAGTVTVDGAQAVTGLQFVTDGYNLAGGAAGALTLFNGVGGNTAVRVDPGVTATLGVALNGGGTLAKLDTGTLVLNGVNSYTGGTALDGGTLVVGNDSALGSGVLTTANGTTLDSNTAVSLANALNVNGSLTLGGSNALTLAGTVAGTGSLIKNGIANLTLSGNNTYAGPTALNAGGLILASNSALGSGALNAAAGTTLDSSTAVALANTVNLAGNLGILGTADLSLNGLVSGSGGLTKTGAGNLTLNGANAYLGGTQLNAGSLTLGNASALGSGALAVNGATTLDTNTALALANNTSLNAALTVGGSNDLSLNGVVDGTGSLTKAGGANLTLNGANTYSGGTALNAGTLTLGSTTALGSGALTVGAAATLANSTPLVLANAVNLNGDLTVAGSNNLTLAGVLAGNAALIKNGAADLLLTGNNSFSGPLTVAAGSVTTTGNGALGTTSGVTVGSGASLNLGGDANLNSLAGNGTVQVAGGATLAVGGSNLDNSFGGALNGAGNLDKNGSGVLNLSGTNALSGAATVNGGTLNVTGSLASGTVAVNSGATLAGSGSLAGAVTVADGGHIGLATGSTLSVGSLVLGGNSNLDVGLGTPVLGGGTGLLNVGGDLTLDGNLNVTDIGGFGSGVYNLINYTGALTDNGLALGTLPGSVVPGDLQVQTAVTNKVNLLVTAPNTTVQFWDGNSLIGNGAIDGGTGTWNAGNTNWTNVDGTLNQGWVNSFAVFQGAAGNVTVDGTQNITGMQFVTDGYTLGAGTAGVLNLVNGGTGNTAVRVDPNATATLGVTLNGAGTLAKLDSGTLVLNGSNGYTGGTALNGGTLVVGNNSALGTGALTAAGGTTLDSNAAVSLANAAVLNGALAVGGSNALTLDGVISGSGSLVKNGAAALTLNGVNSYSGGTGLNAGQLILGNNAALGSGALTVGGAAQLDGSTDLQLANTLNLGGPLTLAGSHDLALNGVISGSGSLVKNGSGALLLTAANTYSGGTTLNGGSTTGNTTSLQGAIANNAALTFEQASDGTYTGNLTGTGVLNKTGTGALLLSGNNTFTGNTNVNAGSLLVNGTLNSAAVQVASGATLGGSGTLGGAVNMADGSVLKAGAATPLSVGSLALSSGTTLDFALGAPGASSTAVNVAGNLTLDGTLNVSDTGGFGVGVYQLFRYGGSLTDNGLTFGTLPVALGNLSLQTALANQLNLVVQTTPGQIQFWNGGTTNPDGSISGGSGTWGPGTNWTDPTGTQGQASTNQFAVFGGQGGTVTVVGNQGFTGLQVLDAGYTLVAGEGGSLSPTNAADGSLAPVRVNSGVTAQIDAPLVGTGGINKLDAGTLLLTGANTYTGGTTVSGGTLAGTTTSLRGRILNNARLLFTQRTNGQFSGTLSGTGALIKQGAGALLLTGNQPFSGTVAVEEGVLQVGNAANPGAVLGGQVTVANGAGLTGNGSVGSLVNNGSVTPDGGKLTVAGNFTNASTGALNLVITPSTTGSLAVGGTANLGGTLNVVNLAPYAGATTYTLLTAGAVNGTFATTNLENLAFLTTALNYSPTQVALAVSRNDVSYASVAATGNQRGVAAALGTGTAVGGAAVQNALLNGDAAAARAAFDSLSGEIHASTASAMLEDSRYVRDAVNERLRQPGCYREDDPRNALAPSENHLSSAGCHGEMVGWMRVLGTWGHMGGDSNSAKLDRNLSGFLLGTDKQVDDAWRVGVAAGYTRSDLDAKRRNSSADVDSYHLMAYTAYQQEAFAARMGVAYSWHDIESKRNVAVGGEGQRLKADYKARSAQVFGEVGYTIQTPTVALEPFAGLAYVNYDSDTIKEKGGSAALRGDADQDITYSTLGVRIGQTITLGNGSKITPRGSIGWRHAFGDTKPDADLSFINGGGSFSTQGVPIAKDSAVVEAGLDYQISQNGRLGLGYSGQLSRNDKDHAVTVSFSLGF
>NZ_CP023969.1|WP_032897482.1|5591765_5593577_+|cation:proton-antiporter
MPHEGNLLQAAVVFLFAAVLTVPLAKRLQLGAVLGYLFAGVIIGPSVLGLIGNPQSVAQFSELGVVLLLFIIGLELSPKRLWVMRKAVFGVGLAQVLLTGVVMGAVALWLFGQSWNSAIVLGLGLALSSTAFGLQSLAERKELNQPHGRLAFAILLFQDIAAIPLIAMVPLLAGSDHPTTEAQGVQHVLQILGSIAVVIIGGRYLLRPVFRIVAKTGLREVSTATALLVVIGTAWLMELVGVSMALGAFLAGLLLADSEYRHELESQIEPFKGLLLGLFFISVGMGANLSLLLSTPLVVIGLTLLLIGLKLPLLYAVGRMVGDLNRESALRLGVVLAAGGEFAFVVFKIGRDQGLFEPQLYDVLVLTITLSMAVTPLLLLVCPKLFKPKVKPVEVPEEYRAIESDAPRVVIAGMGRMGQIVARILRAQNISFIALDTSVETIELTRSFGGMPVFYGDPQRPEILHAAKVDQAEFFVIAMDDPEINIKTAELVRNLYPHMKIIARARNRQHVHRLVDLDASPVRETFYSSLEMSRRTLVGLGLSQAQADARINRFKTHDQQVLAAQHAVYDDAAKVMQTAQEARAELARLFEMDRLEEESSDKV
>NZ_CP023969.1|WP_098951875.1|5593649_5594204_+|hypothetical-protein
MATFTKTAMLLALALTAGSVFAAVKPTTQTISTLGGKFTFKLPKAYSADTLPSGTAQDGTADTQGTLYANSTTKSVVIVAETVRNDGAKIQDNDPQFLDGAVADFVKDQSAALPDFKKLGEKKLTYKGLGLRQVDSSATQGGGKTLNSTFLGGSGNHLLVIQAISRADDVKGHAQLVKQITGGK
>NZ_CP023969.1|WP_098951877.1|5594758_5595475_-|dienelactone-hydrolase-family-protein
MLKQLAFALALVASAAHADSGLHTDLPLSYLEQTQGDARNQPLVIFLHGFGSNEQDLFDIKDALPSTWTYLSVRAPLPVEPQGYRWFTKTDEPEYNGETDELFSSARLIKDFVLKATAKYHTQSDRVFLVGFSQGAIMSYEVALREPELVRGIAALSGSVLPVLRSALKPDAAMGKLAIFIGHGTLDQALPFSSATQANEVLAGLGLKPEFHEYPGMNHTISAAEIQDLKAWLEKSLK
>NZ_CP023969.1|WP_098951879.1|5595485_5596241_-|precorrin-6A-synthase-(deacetylating)
MKRILIIGIGAGNPDYITMQAVKALNRTDVFFLMDKGQSKDKLIDLRREICDTYITEPGYRFVEADCPERVRGEVDYTTAVQDLNRDKQQTFERMINEEMADGEVGAFLAWGDPALYDSTIRILQAILASGRCVFEFEVIPGITSVQALAAQHKVPLNRIGKSIEITTGRRLAAGQASDADTLVVMLDAEDSYRSVADQDLDIYWGAYLGTPDEILISGKVAQVAEEIERVRKAARLENGWIMDTYLLRKP
>NZ_CP023969.1|WP_098951880.1|5596286_5596841_-|histidine-phosphatase-family-protein
MPATRLTLICHALTPLQKQGRFPDDESVTMDWQGAALSLAGRYKQPARLVCGPEVRARQTAGLFGDNAQVDPALCDLDVGAWKGQRIGQLDSETLNTWATDSTSAAHGGESVDQLCRRVGQWLKSLETHPGHVIAVTHPFVIRAAMLYVMQLPISMFYRIDVEPLSATELRFNGVWRLRLETSA
>NZ_CP023969.1|WP_098951882.1|5596992_5598312_-|MFS-transporter
MGNPAQDTVRKRRRAFLGATSGHLIEWYDYGVYGFLAVYIGQAFFVSDDPTTSLLASFAAFALSFFIRPLGGLFFGPLADKIGRRKTLIMALVMMTGSTVMLGLLPTYASLGIAAPILLILVRCVQGFSAGGEIGTVTSFISEYAGPGRRGFATCWLMVTAVLGLLLGGAVANGMTWVLGAEVMQEWAWRIPFLIAAPLGFISMYIRLKLEDSPEFLALQRAGQTSRAPLREVWQWKRAIALVFFIITLHSSIFYLVLTFASTYMAKILKFDSGTTLLYVFVASFSAAFVMPFGGAFTDKYGRKPFLMVIGTLATLAMFWLFKSAPTATPATFFAPLMAVAILFGLYASSTYALMSELLPTRIRSTGIAVAYNVPVAVFGGSAPLISTWLIKVTGDITSPWYFYVATGVVSLLALVVLRKEDFVASAHSTAVPANTALA

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Crispr_ID: NZ_CP023969_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_24

5702494-5702601

Orphan

Consensus_repeat	Method
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACATTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_24

>merge|NZ_CP023969|24|5702494-5702601|CRISPRCasFinder
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACATTTGGATCGCGGGGTGCCAGGTGCAGAGGCGTCGGCTGGCAGGCCGCCATCGCAGGCAAGCCAGCCCCCACATTTG

>NZ_CP023969|24|23|5702494-5702601|CRISPRCasFinder
AGGCCGCCATCGCAGGCAAGCCAGCTCCCACATTTG	GATCGCGGGGTGCCAGGTGCAGAGGCGTCGGCTGGC
AGGCCGCCATCGCAGGCAAGCCAGCCCCCACATTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098951981.1\|5697830_5699366_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP023969.1\|WP_098951989.1\|5706877_5707216_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|131894
NZ_CP023969.1\|WP_032892337.1\|5697043_5697499_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023969.1\|WP_003190457.1\|5711507_5711690_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|226252
NZ_CP023969.1\|WP_098951982.1\|5700289_5700508_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|226252
NZ_CP023969.1\|WP_019821492.1\|5700561_5701113_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|223811
NZ_CP023969.1\|WP_169918618.1\|5701153_5701543_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951991.1\|5707173_5708070_+\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|184001
NZ_CP023969.1\|WP_098951979.1\|5695219_5696059_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|366523
NZ_CP023969.1\|WP_098951986.1\|5702644_5702959_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892347.1\|5710957_5711188_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_138183580.1\|5697655_5697856_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_098951988.1\|5704284_5706258_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131890
NZ_CP023969.1\|WP_003190470.1\|5703358_5704282_+\|ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|182518
NZ_CP023969.1\|WP_098951993.1\|5709907_5710792_-\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP023969.1\|WP_020303216.1\|5706261_5706876_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|182628
NZ_CP023969.1\|WP_003190478.1\|5699784_5699961_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|226252
NZ_CP023969.1\|WP_169918619.1\|5708200_5709796_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP023969.1\|WP_056784109.1\|5696291_5696984_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP023969.1\|WP_003190473.1\|5701598_5701868_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098951981.1\|5697830_5699366_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.11563e-55
NZ_CP023969.1\|WP_098951989.1\|5706877_5707216_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	gnl\|CDD\|131894	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	3.6803e-32
NZ_CP023969.1\|WP_032892337.1\|5697043_5697499_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.45356e-11
NZ_CP023969.1\|WP_098951982.1\|5700289_5700508_+\|general-stress-protein	gnl\|CDD\|226252	COG3729, GsiB, General stress protein [General function prediction only].	2.164e-06
NZ_CP023969.1\|WP_019821492.1\|5700561_5701113_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|223811	COG0740, ClpP, Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	2.92893e-33
NZ_CP023969.1\|WP_098951991.1\|5707173_5708070_+\|protoheme-IX-farnesyltransferase	gnl\|CDD\|184001	PRK13362, PRK13362, protoheme IX farnesyltransferase; Provisional.	2.60419e-91
NZ_CP023969.1\|WP_098951979.1\|5695219_5696059_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|366523	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease.	3.32779e-52
NZ_CP023969.1\|WP_169918619.1\|5708200_5709796_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	0
NZ_CP023969.1\|WP_098951988.1\|5704284_5706258_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	gnl\|CDD\|131890	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	0
NZ_CP023969.1\|WP_003190470.1\|5703358_5704282_+\|ubiquinol-oxidase-subunit-II	gnl\|CDD\|182518	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional.	1.18029e-133
NZ_CP023969.1\|WP_098951993.1\|5709907_5710792_-\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	2.95407e-117
NZ_CP023969.1\|WP_020303216.1\|5706261_5706876_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	gnl\|CDD\|182628	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional.	8.27491e-112
NZ_CP023969.1\|WP_003190478.1\|5699784_5699961_+\|general-stress-protein	gnl\|CDD\|226252	COG3729, GsiB, General stress protein [General function prediction only].	0.000339269
NZ_CP023969.1\|WP_056784109.1\|5696291_5696984_+\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	2.55689e-16
NZ_CP023969.1\|WP_003190457.1\|5711507_5711690_+\|general-stress-protein	gnl\|CDD\|226252	COG3729, GsiB, General stress protein [General function prediction only].	0.000686787

>NZ_CP023969.1|WP_003190473.1|5701598_5701868_-|hypothetical-protein
MKNSLYVIEYEYHHEPKSFIIRAEVMNNAEAWHWACCDAGIGIIPRSRNEKIKRISKPLAERYGLENVRWRPSGSIPFIAKPYVPPPPE
>NZ_CP023969.1|WP_169918618.1|5701153_5701543_+|hypothetical-protein
MAKTSTPEPSGRTRPQLPSYHHKILAIKHQLSACLNSSFLAVENVHFLIESGRFIQGGIDVTHLQANRRCLHCKQPFESTLDDPDYLMSPASDMLCPACKQQYAADIMKEALQRSVQKLCMLQERRKKQ
>NZ_CP023969.1|WP_019821492.1|5700561_5701113_+|ATP-dependent-Clp-protease-proteolytic-subunit
MPLHIINFTAPVTASTCSQLIEKASLAVQQDAQGLVLNIATMGGECSYGFTMYNFLLSLPIPVHTHNLGTVESMGNIIFLAGERRTACKHSKFLFHPFHWHVQGAVDHSRMSEYAMSLDYDLQLYARIVAERTADAVEKLETEKYLIAAPRILDPQQALTAGLIHGIELPVIKAEFVSSFIHS
>NZ_CP023969.1|WP_098951982.1|5700289_5700508_+|general-stress-protein
MTTQDKQGQMSVSEAGKKGGEATSASHDKEFYQEIGSKGGQNSGGNFANDREKASEAGRKGGEHSHGGGRKS
>NZ_CP023969.1|WP_003190478.1|5699784_5699961_+|general-stress-protein
MTTSNKNPGNFANDREKASQAGKKGGQASGGNFANDREKASEAGRKGGQNSHGGGRKS
>NZ_CP023969.1|WP_098951981.1|5697830_5699366_-|sensor-domain-containing-diguanylate-cyclase
MKRDTRLVMLLLLVIGCSLTSLTIWKVLSSRDRALAEVDVHGLNLTQALTTYTEGIVRQSSLLLLGLVERLETEGSGPVQIQRISTLINRQQPLMPQLSGITIYDHQGRWLLSSNRAIPEGANSSDRAYFIHHRDDPSAEPFIGPPIQSRANHEWVVTISRRFNDAAGNFAGVVAVTLGVENFLRVFGKLDVGQEGAIGLSYADGTLLVRYPFREQDMGRNFSSSPIYSKYLVDQPVGTAAYTSSLDGVERLYAFRKSETLPLITTVALGKHEALAAWRIEAALSAVVVAGLLGLTGLIGWFLILDIRRRTAAEEALRVAQQQLLDSNRQLALLAKKDALTGLANRRCFDETLAVEARRAQREGTSLALLMLDIDHFKRFNDAFGHVAGDACLQAVSTLLETCVRRPSDLVARYGGEEMAIILPATDNAGAAVVAQRILSRLQQENITHPGSPFGHVSVSIGIATSVGSRLEPVLGLVEAADTALYGAKAAGRNGFNVHPADRLTSPASGS
>NZ_CP023969.1|WP_138183580.1|5697655_5697856_+|hypothetical-protein
MNGQSVVHPFEPNETLRMLVKKAVLCLALLSAGFIAGYAAKPTPQLQVTAGQLMECGELMIPTLGM
>NZ_CP023969.1|WP_032892337.1|5697043_5697499_+|GNAT-family-N-acetyltransferase
MTEYLLPPAAPHWLIRQATPDDVHALVALDAYATEHASRRVFIYDAVVRQQCLVAADANVCAGYLVLTHDFFNHGFIALVVVSPLYQRQGVGLRLLAAAEAACKTPKLFASTNASNGAAQALLTKAGFIPSGQIENLDDNDPERVYVKFIR
>NZ_CP023969.1|WP_056784109.1|5696291_5696984_+|alpha/beta-hydrolase
MSEKPAIVLVHGFWGGAAHWNRVIIELHNKGYTDLHAVEMPLTSLADDAERTRKMVAQIKGPVLLVGHSYGGAVITQAGNEPNVAGLVYIAAFAPDDGESPGGITQEHLPEAAPNLAPDSDGYLWVKPERFHDSFCQDLPRQEGQVMGVTQKAPLASTFGDVVSNPAWKNKPSWYQISSQDRMIHPDNQARMAKRLGTRETLTLDASHASLASRPAEVAAFIDKAACSLS
>NZ_CP023969.1|WP_098951979.1|5695219_5696059_-|DNA/RNA-non-specific-endonuclease
MQGSTSFKYLAFSLIPLMAACTTPTRQSVVVPAPPLSFDNCAVGCPTGGSPVTLNRLAYTLNNNGSTKFANWVSYKITKATAASGRSRDWRTDPDIPAGETLDPVDYNGANVALKIDRGHQANLASMAGVADWQTLNYLSNITPQKAELNQGPWARLEDQERNLSKEPGVDQVYVATGPLYEHFVGSLPGTNKVHTIPSGYWKIIVVGSSPQTGLYASFVMNQETPKGADFCDYQVTVDHVEERSGLTFWSTLPQAMQAALKARQGQLPSRIGCNRTQA
>NZ_CP023969.1|WP_098951986.1|5702644_5702959_-|hypothetical-protein
MFIRGKIYEAWAAKALDEECFTQEVENGCHIEVRAREREDGDIEVLLCVYTATGQCVVERTRQLPGAEWTVRDALKRGIDQAERIAGGESGRLPCADAHLHDDD
>NZ_CP023969.1|WP_003190470.1|5703358_5704282_+|ubiquinol-oxidase-subunit-II
MKRAMGYCLVTITSLFLLTSCNLVVFNPKGQVATDERDLIILATGLMLLVVVPVIVMMFVFAYRYRATNKKARYSPRWASSHKIEAVVWGVPLLIIIVLGWVTWETTHALDPYRPLESDTPPINVQVVATDWKWLFIYPDLGIASVNELALPVHTPVSFTVTSDAAMTSFFIPALGGQIYAMAGMQTKLHLIANETGEFRGIAANYNGPGFSDMHFTTLSLSAADFQSWVTKVKGAATPLDHSTYAQLAKPTLKHPVTYYSAVQERLFLDIVDKYEGMNKANKPRRSPLSDAAQRTDQHPSLLAEER
>NZ_CP023969.1|WP_098951988.1|5704284_5706258_+|cytochrome-o-ubiquinol-oxidase-subunit-I
MFGKLSWDAIPTTEPIVMYTLAVLGLIGVALVGSITWKRKWGYLWREWFTSVDHKKIGCMYIIVALVMLLRGFSDAIMMRTQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVVGLMNIVVPLQIGARDVAYPFLNALSFWLFVVGAALVNISLGVGEFARTGWVAYPPLSELGYSPGVGVDYYIWSLQISGIGTLLTGVNFFVTILKMRTEGMTLFKMPVFTWNALCTSVLILAAFPILTATLLMLTLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSSKRLFGYVSLVWATIAITVLSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWLFTMYRGRVRFETPMLWTLGFIVTFSIGGMTGVLLAVPGADFLLHNSLFLIAHFHNVIIGGAVFGYMAGLTYWFPKAFGFRLNDKLGRIAFWCWLVGFYFAFMPSYVLGFMGMTRRLNHFDNPEWRPWLLLELVGVAIILCGVATQALQLLVSIRNRHQYRDLTGDPWDGRTLEWATASPPPLYNFAEQPKVNDLDAYWGMKERGVSTLSHTDYRSIHMPRNTASGLVISLFALVCSFALVWHIWWMAAFGLVASVVAFVVRSYDEDTDYFVPAQEVARIETARLKDLAEA
>NZ_CP023969.1|WP_020303216.1|5706261_5706876_+|cytochrome-o-ubiquinol-oxidase-subunit-III
MSNIVMEKDIAHTHEQGHEDAGSLSLFGFWIYLMTDCILFATLFAGYAVLRDSVAGGPSSMDIFELPYVLAETMLLLLSSITYGYAMLAMNHGKQRDVLRWLGLTFVLGAGFIAMEINEFHHLIAEGYGPDRSAFLTAFFTLVGTHGAHVLTGLIWMAVLMVQVKQRGLTSTNATRLSCLSLFWHFLDVVWICVFTVVYLLGVV
>NZ_CP023969.1|WP_098951989.1|5706877_5707216_+|cytochrome-o-ubiquinol-oxidase-subunit-IV
MYKQSSLHSSAGTSHGSSRSYLVGFLVSVLLTLIPFGLVMFPSLPRTFTAWLVVALGAIQIVVHLKFFLHLDTAEEQRWNLIALIFSVVIILLLVGLSLWIMDSIHHNMLAH
>NZ_CP023969.1|WP_098951991.1|5707173_5708070_+|protoheme-IX-farnesyltransferase
MDHGQYSSQHAGALKHWRGLFNTAIELTKPGIIVGNLASVLGGYLLAASGHVASVTHGLATLLGTALVIGCGCVINNCIDRDIDRRMVRTCHRPLALRTIKVSTAAGYGIVLGACGFGLLWAGSNALACMLAMVGLVIYAGVYTYWLKRRSHWATLIGSLSGAMPPVIGYCAVTGRFDLTALLLIMVFCCWQMPHSHAITVMRREDFRAAGLPLLSLAQAHRQIQAYMLAFLASALMLGAVAQMAALYFVVMLGLGGYWLALAANSTRLTDPTGWARRLFGFSIVLVLALNLALAVLR
>NZ_CP023969.1|WP_169918619.1|5708200_5709796_-|response-regulator
MATKKKPVVEGMELAMLSASRKDLFFAAMQASHSAMIVTDPAEPDNPIIFANQAFLTLTGFELDEVIGRNCRFLQGPQTDKNALHQVQRAVERHHEACVEVLNYRKDGSTFWNELFISPLFNERGQLVYFFASQLDVSRRHDAEQRVRRAQDLEALGQLTGGIAHDFNNLLQVMMGYLDLIQQSAKRPGSDPQRIVSSASRARAAAEKAQTLTQQLLAFSRKQRLDSRVINLNSLLGRPDFMAPALRGVALQVELADELWNCRIDPVQAELAVQHLLSNAQDALHGRADPSVTVKTCNVQVPGDIDAEREGLAEGCYVSISVSDNGNGIDAGIQDKVMQPFFTTKEEGQGSGLGLSMVYGFVKQSGGTARIHSDPGIGTTIRLYFPADDSQLWVEQTPTATSPQGSERILIVEDRPEVAELAQVILSDYGYHTAIAHNAAEALGMLKQATYDLVFSDLIMPGAMNGAALAREVSRLYPHIRILLTTGYAKDSLARADIQVHEFELIPKPYQPADLPRKIRAVLDARHPATI
>NZ_CP023969.1|WP_098951993.1|5709907_5710792_-|manganese-catalase-family-protein
MFLHNKRLQYTVRVAEPNPGLANLLLEQFGGAQGELAAASRYFTQALAEDDPGRKDLLMDIATEELSHLEIVGSIIVMLNKGAKGRMAEGVEEEGELYRALNGAGNDSHITSLLYGAGSPLTNSAGVPWTAAYIDTIGEPTADMRSNIAAEARAKIVYERLMNVTDDPGVKDALGFLMTREIAHQISFEKALHAIQPNFPQGKLPGKPEFTQVYFNMSQGAENLRGPWNQGDGWEFVENPQPAVDGGDGTASVQLDADEEAALSAMKIRTLSDPTSDPTTGADLGRGLQPKPEP
>NZ_CP023969.1|WP_032892347.1|5710957_5711188_-|hypothetical-protein
MKPNPSNPQYRPLEQPDAPNEDGCVIGTAGRDEDPNATTDWDHPDSAATPADASIKPASGTPGIDVVPESENHGAD
>NZ_CP023969.1|WP_003190457.1|5711507_5711690_+|general-stress-protein
MTTGNKNPGNFANDREKASEAGKKGGQASGGNFANDREKASEAGRKGGQHSHGGGRKSGS

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Crispr_ID: NZ_CP023969_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_25

5973746-5973853

Orphan

Consensus_repeat	Method
CACAGTTGGATCGTTGGGGTGCCTGGGAGATAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_25

>merge|NZ_CP023969|25|5973746-5973853|CRISPRCasFinder
CACAGTTGGATCGTTGGGGTGCCTGGGAGATAGGCGTCGGCTGGCAGGCCGCCATCGCAGGCAAGCCAGCTCCCACAGTTGGATCGTTGGGGTGTCTGGGAGATAGGC

>NZ_CP023969|25|24|5973746-5973853|CRISPRCasFinder
CACAGTTGGATCGTTGGGGTGCCTGGGAGATAGGC	GTCGGCTGGCAGGCCGCCATCGCAGGCAAGCCAGCTCC
CACAGTTGGATCGTTGGGGTGTCTGGGAGATAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098952188.1\|5984465_5985653_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP023969.1\|WP_098952176.1\|5962849_5963656_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224441
NZ_CP023969.1\|WP_032892573.1\|5985744_5986284_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP023969.1\|WP_003190133.1\|5973973_5974714_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP023969.1\|WP_098952179.1\|5966304_5966958_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
NZ_CP023969.1\|WP_098952178.1\|5963652_5964498_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226616
NZ_CP023969.1\|WP_020301078.1\|5978702_5979623_+\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|234726
NZ_CP023969.1\|WP_003190129.1\|5979777_5980737_+\|bile-acid:sodium-symporter-family-protein	unknown	unknown	gnl\|CDD\|223462
NZ_CP023969.1\|WP_003190143.1\|5965281_5966271_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP023969.1\|WP_032892567.1\|5972174_5972513_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP023969.1\|WP_003190141.1\|5967809_5969924_+\|carboxy-terminal-processing-peptidase	unknown	unknown	gnl\|CDD\|236873
NZ_CP023969.1\|WP_098952184.1\|5981272_5983147_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|235865
NZ_CP023969.1\|WP_098952183.1\|5974961_5976770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_020301075.1\|5972612_5973068_-\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP023969.1\|WP_098952186.1\|5983205_5984354_-\|TDT-family-transporter	unknown	unknown	gnl\|CDD\|187758
NZ_CP023969.1\|WP_032892564.1\|5964484_5965285_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP023969.1\|WP_010211634.1\|5980849_5981164_+\|quaternary-ammonium-compound-efflux-SMR-transporter-SugE	unknown	unknown	gnl\|CDD\|171110
NZ_CP023969.1\|WP_098952705.1\|5976799_5977933_+\|catalase-family-protein	unknown	unknown	gnl\|CDD\|163708
NZ_CP023969.1\|WP_032892566.1\|5970040_5971810_+\|EAL-and-GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP023969.1\|WP_003190138.1\|5971806_5972178_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098952188.1\|5984465_5985653_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.68902e-13
NZ_CP023969.1\|WP_098952179.1\|5966304_5966958_+\|HAD-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.45883e-55
NZ_CP023969.1\|WP_032892573.1\|5985744_5986284_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	5.27407e-08
NZ_CP023969.1\|WP_003190133.1\|5973973_5974714_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	8.22397e-79
NZ_CP023969.1\|WP_098952176.1\|5962849_5963656_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|224441	COG1524, COG1524, Uncharacterized proteins of the AP superfamily [General function prediction only].	3.6915e-38
NZ_CP023969.1\|WP_098952178.1\|5963652_5964498_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.82998e-112
NZ_CP023969.1\|WP_020301078.1\|5978702_5979623_+\|recombination-associated-protein-RdgC	gnl\|CDD\|234726	PRK00321, rdgC, recombination associated protein; Reviewed.	5.48746e-164
NZ_CP023969.1\|WP_003190129.1\|5979777_5980737_+\|bile-acid:sodium-symporter-family-protein	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	3.31442e-102
NZ_CP023969.1\|WP_098952705.1\|5976799_5977933_+\|catalase-family-protein	gnl\|CDD\|163708	cd08152, y4iL_like, Catalase-like heme-binding proteins similar to the uncharacterized y4iL. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to Rhizobium sp. NGR234 y4iL, of mostly bacterial origin.	2.54505e-113
NZ_CP023969.1\|WP_032892567.1\|5972174_5972513_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.07124e-07
NZ_CP023969.1\|WP_003190141.1\|5967809_5969924_+\|carboxy-terminal-processing-peptidase	gnl\|CDD\|236873	PRK11186, PRK11186, carboxy terminal-processing peptidase.	0
NZ_CP023969.1\|WP_098952184.1\|5981272_5983147_-\|MFS-transporter	gnl\|CDD\|235865	PRK06814, PRK06814, acyl-[ACP]--phospholipid O-acyltransferase.	1.71227e-164
NZ_CP023969.1\|WP_020301075.1\|5972612_5973068_-\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	3.51513e-13
NZ_CP023969.1\|WP_098952186.1\|5983205_5984354_-\|TDT-family-transporter	gnl\|CDD\|187758	cd09318, TDT_SSU1, Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes sulfite sensitivity protein (sulfite efflux pump; SSU1). This family contains the sulfite sensitivity protein (sulfite efflux pump; SSU1) and belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family. The SSU1 gene encodes the sulfite pump required for efficient sulfite efflux. Mutations in the SSU1 gene cause sensitivity to sulfite while overexpression confers heightened resistance to sulfite toxicity. In dematophytes and other filamentous fungi, sulfite is excreted as a reducing agent during keratin degradation; thus sulfite transporters in keratinolytic fungi could be a new target for antifungal drugs in dermatology. The number of genes encoding sulfite efflux pumps in fungal genomes varies from species to species.	4.17438e-136
NZ_CP023969.1\|WP_032892564.1\|5964484_5965285_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.48526e-57
NZ_CP023969.1\|WP_010211634.1\|5980849_5981164_+\|quaternary-ammonium-compound-efflux-SMR-transporter-SugE	gnl\|CDD\|171110	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE.	1.3272e-34
NZ_CP023969.1\|WP_003190143.1\|5965281_5966271_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.18494e-148
NZ_CP023969.1\|WP_032892566.1\|5970040_5971810_+\|EAL-and-GGDEF-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.71874e-70

>NZ_CP023969.1|WP_020301075.1|5972612_5973068_-|DUF1232-domain-containing-protein
MKPPFNFTRFLPMAARLLGRGRLPTLLFAVAAKGSSQGNRLGQLKDDLKLLQALCLAYWRGEYRAISPKALISVVAGLMYFLSPIDAIPDFLPMFGMLDDIAVLAWVMKTLSGELSAFRAWRDGQRPEKLAVVERLPATPELLARENPQKN
>NZ_CP023969.1|WP_032892567.1|5972174_5972513_-|helix-turn-helix-transcriptional-regulator
MDIQIISRDGEPEYAVLPWDQYQALLKAAGQLQPPRASPSAAPTATEQDLRPLAALRGLREAKGLAIEALARTVGISPSYLGLIESGERQPDAAIRRSLAWELGVAGWRDES
>NZ_CP023969.1|WP_003190138.1|5971806_5972178_-|hypothetical-protein
MSLRISRQHWDGLINELDQARRQRHLLTYRALLERLQFPTPAMQTLAAALEHLAALDAKAEQPLRSSLVISQGASRLPRTGFFECVERLGRFSGPSDGVAAASWHASEVVRVFEYEYPESAEA
>NZ_CP023969.1|WP_032892566.1|5970040_5971810_+|EAL-and-GGDEF-domain-containing-protein
MTMTEQLNALGSILAQGSLHSLFQPIICLSERRILGYEALSRGPSNSPLHSPVALFSVASHAGRLSELDMACRESACRRFSEQKLPGKLFLNISPESLMEHAHQPGRTLQLLRDFGISPSHVVIELTEQAPTDDFALLQTALHHYRDMGFAIALDDLGAGYSSLRLWSELRPDYVKIDRHFIDGIHQDALKREFVGSILQIAKASRAQVIAEGIELPEELAVLTEMGVDLVQGYLLCRPQEQPPQEARLMLPKPDNAMLALNDEGSDLSALLNEQPAVDQDTATAQVLESFRRQANLNSLAVLDGCGRPVGIVHRHSLSDALLKPFATDLFARKPISRLMSDDFLAVELSQSLQQVSRLLTSRARQRIEEDFIITLNGDYLGLGRVIDVLKLITELKIQQARYANPLTLLPGNVPIQQCLTRLLQQQRESVICYVDIDSFKPFNDIYGYGRGDEVLLCLAQCLNDRVDPSRDFVGHIGGDDFLLVLGPQDWRKRLNQLLDDFHTQCRRFYRAEHLEAGCFVALNRQGARQEFALLSLSIGVVHLYPQACAQLDASQLAELASQAKHHAKDVAGYSIHVIDSMDSCTQAL
>NZ_CP023969.1|WP_003190141.1|5967809_5969924_+|carboxy-terminal-processing-peptidase
MRYQLPPRRISMKHLFPSTALAFFIGLGFASMSTNTFAANSWDNLQPDRDEVIASLNVVELLKRHHYSKPPLDDARSVIIYDSYLKLLDPSRSYFLASDIAEFDKWKTQFDDFLKSGDLQPGFTIYKRYLDRVKARLDFALGELNKGVDKLDFTQKETLLVDRKDAPWLTSTAALDDLWRKRVKDEVLRLKIAGKEPKAIQELLTKRYKNQLARLDQTRAEDIFQAYINTFAMSYDPHTNYLSPDNAENFDINMSLSLEGIGAVLQSDNDQVKIVRLVPAGPADKTKQVAPADKIIGVAQADKEMVDVVGWRLDEVVKLIRGPKGSVVRLEVIPHTNAPNDQTSKIVSITREAVKLEDQAVQKKVLNLKQDGKDYKLGVIEIPAFYLDFKAFRAGDPDYKSTTRDVKKILTELQKEKVDGVVIDLRNNGGGSLQEATELTSLFIDKGPTVLVRNADGRVDVLEDENPGAFYKGPMALLVNRLSASASEIFAGAMQDYHRALIIGGQTFGKGTVQTIQPLNHGELKLTLAKFYRVSGQSTQHQGVLPDIDFPSIIDTKEIGESALPEAMPWDTIRPAIKPASDPFKPFLAQLKADHDTRSAKDAEFVFIRDKLALAKKLMEEKTVSLNEADRRAQHSSIENQQLVLENTRRKAKGEDPLKELKKEDEDALPTEADKTKPEDDAYLAETGRILLDYLKITKQVAKQ
>NZ_CP023969.1|WP_098952179.1|5966304_5966958_+|HAD-family-hydrolase
MALVIFDLDDTLIHGDCATLWSEQMGRLGWVDPESFMRRNNELMDAYSQGKLLMEDFMDFSLEPMIGRTPEEIEHLVEPWVEDVIEPLIYSDATKTIALHRANGDRILVISASGTHLVTPIAARIGIEEVLGINLEVSHGVYSGKTVGVLTYREGKITRLLEWLEQEGETLEGAYFYSDSRNDLPLLLKVDHPQVVNPDPVLRAHAEQAGWPIHHWT
>NZ_CP023969.1|WP_003190143.1|5965281_5966271_+|ABC-transporter-ATP-binding-protein
MSFVSVQHLQKGYTGTPVFSDINCEIAKGEFVTLLGPSGCGKSTLLRCIAGLTPVDSGQILLDGQDIVPLSPQKRQIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVELKDLAGRYPHQMSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDAFAAGFIGNYNLLDADKASQLLQRPISGRIAIRPEAIELSRSGELDALVRSHSLLGNVIRYRIEARGVELVVDVLNRSADDLHPDGQRLALSIDPSALCEVA
>NZ_CP023969.1|WP_032892564.1|5964484_5965285_+|ABC-transporter-permease
MSRAEAGTASLYHRVVVYLLFLILVLPLVGTFVYSISSSWSATILPAGFSVKWYVQLWSDPRFLMAFGQSLLVCVGALILSVVLILPLLFVVHYHFPKLDALMNILILLPFAVPPVVSSVGLLQLYGSGPLAMVGTPWILIGCYFTVALPFMYRAITNNLQAINLRDLMDASQLLGASTWQAAILVVLPNLRKGLMVALLLSFSFLFGEFVFANILVGTRYETLQVYLNNMRNSSGHFTSAVVISYFFFVLVLTWAATLLNKDKSQ
>NZ_CP023969.1|WP_098952178.1|5963652_5964498_+|ABC-transporter-permease-subunit
MNALTRGKWLALLCLLPFALFFIVFEIAPLVWVLISSLQTEEAGWSLENFTRIFTSKFYRQAIQLSLEISFYSSIFGIIIATLGSYSLRRVDSPLRNFVTAFANMTSNFAGVPLAFAFIILLGFNGSITLMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDALREDWRESAALLGANGWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAGLVSGDVSLDPNMASALAVVLVALMTVVTVVHQLLLKRSYHVSR
>NZ_CP023969.1|WP_098952176.1|5962849_5963656_+|alkaline-phosphatase-family-protein
MKHNVILVVLDGLNFEVARHAMGHLQAYVGAGRAALYKLECELPALSRPLYECILTGVPPIQSGIVHNNVSRLSNQRSIFHYATDAGLSTAAAAYHWVSELYNRTPFLAARDRHTDDQALAIQHGHFYWNDHYPDSHLFADAESLRLKHAPNFLLVHPMNIDDAGHKHGLDTAQYRNSARSADIILADYLQGWLDAGYQVLVTADHGMNNDRSHNGLLREEREVPLFVIGDAFSLDSHAAPKQTDLCGTVCELLGVPHDKPVCRELLK
>NZ_CP023969.1|WP_003190133.1|5973973_5974714_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKQHRLAAAVALVSLVLAGCDSQTSVELKTPAQKASYGIGLNMGKSLAQEGMDDLDSKAVAQGIEDAVGKKEQKLKDDELVEAFAALQKRAEERMTKMSEESAAAGKKFLEDNAKKDGVVTTASGLQYKIVKKADGAQPKPTDVVTVHYTGKLTNGTTFDSSVDRGSPIDLPVSGVIPGWVEGLQLMHVGEKVELYIPSDLAYGAQSPSPAIPANSVLVFDLELLAIKDPAKAEAADAPAAPAAKK
>NZ_CP023969.1|WP_098952183.1|5974961_5976770_+|hypothetical-protein
MRIFSRVLLLILIALGLILAVVLYYTLNPKLPDYVPVKQVHYQEQWSADDRQTYYFTPQGTQVKGLHYDWFTALELPFSEQRFAAPEYLARFGFLVDPKQTPTAQNPGNLPVGFARHQNADSKAQYLDITCAACHTGELHFKGQALRIDGGSAQHVLPSSVPTLRGGSFGQALVASLAATYYNPWKFERFAHKVLGDQYDAQRDQLRKDFKQSLNQFLKVAWNDTHRGLYPTEEGPGRTDAFGRIANASFGDAISPDNYRVANAPVDYPQLWDIWTFDWVQWNGSAQQPMARNIGEALGVGATLAFFDAAGQPLKGDARYPSSVRVRDLHLIEETLQRLKPPTWPQDLFGAIDKPLAAQGRALFAENCAGCHLPTVTQENGRPVQQLKMLPVDYIGTDPGTANNIADQRYDLSALQWDPAELARLNVELHPTPTAPLDLKKMSVAQGLAYVTAFVEEHAYRAAGVTPAERPGLDGFGLPIGVRELRAYKARPLAGVWATPPFLHNGSVPTIYQLLSPQDERSTTFYKGTFNYDPRHLGFETSAFKNAFLFDTKITGNHNSGHEFRAGERGNGVIGRGLLPQERWALLEYLKVLGGPLEQQLP
>NZ_CP023969.1|WP_098952705.1|5976799_5977933_+|catalase-family-protein
MLARLWLRLGAFVGKTLLWLLGLGLLGWVLATAWFAWQHRGPVSVKEQIPPGEAAMTQGIIQTAVRIVDQHREGTRYLRDAHAKAHGCVKAEVNVLADLDPALRQGVFAEPGKTWQATMRLSNGNAYPQFDSIRDARGMAIKLLDVPGKQLMADQQARTEQDFVMFSHPNFFVSDVAEYAQNIGAQADGKKVLAFFPKLDPRSWQVRHLFIALATLAPAPASPTQTTYFSVSPYKFGAANAKFRVAPDPQSCPDYVLPKQNQDLPNFLRSALNQQLSTDRVDACFVLQIQRQNPQAFMPIEDTSIEWKESDAPYETVAKVRIPAQDFDTPAQNLACDNQSFNPWFGLEAHRPIGGINRLRKAVYEAVSDYRHSRNAP
>NZ_CP023969.1|WP_020301078.1|5978702_5979623_+|recombination-associated-protein-RdgC
MWFKNLLIYRLTQDLPVDAEALEAAMATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAIMTDWVTTQKPADDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLTTGKVVTQLSLAWQDKLSFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGEETPQGI
>NZ_CP023969.1|WP_003190129.1|5979777_5980737_+|bile-acid:sodium-symporter-family-protein
MRALAALSRFVGNTFAYWVLIFAVVAFLQPSWFIGLKSAIVPLLGLVMFGMGLTLKLEDFAEVARHPWRVALGVVAHFVIMPGVAWLLCQAFHLPAEIAVGVILVGCCPSGTSSNVMTWLARGDLALSVAIAAVTTLLAPLLTPALIWLLASAWLPVSFMELFWSILQVVLLPIVLGVVAQRLLGDRVRHAVDVLPLVSVVSIVIIVAAVVAASQGKIAESGLLIMAVVMLHNSFGYLLGYFTGRLFKLPLAQRKSLALEVGMQNSGLGAALASAHFSPLAAVPSALFSVWHNISGALLSTYFRRMSEKEDRRALETTP
>NZ_CP023969.1|WP_010211634.1|5980849_5981164_+|quaternary-ammonium-compound-efflux-SMR-transporter-SugE
MSWIILFFAGLFEVGWAVGLKYTDGFSKPLPTALTIAAMAVSLGLLGLAMKELPLGTAYAIWTGVGAVGTVIAGIILFGESMALFRLASVALIICGLIGLKIST
>NZ_CP023969.1|WP_098952184.1|5981272_5983147_-|MFS-transporter
MSHPSQFTLLRTRRFLPFFITQLLGAFNDNIFKQSLILAILYKLTIEGDRSIWVNLCALLFILPFFLFSALAGQFGEKFNKDALIRAIKIGEIVIMAVGATGFLTNHLELMLLALFAMGTHSALFGPVKYSIMPQALHDDELVGGNGLVEMGTFLAILAGTIGAGIMMSSTHYAPVVAVAIVAVAVLGYLASRSIPRAAASTPQLRLDWNIFTQSWATLRMGLGQTPAVSRSIVGNSWFWFVGAIYLTQIPAYAKEWLYGDETVVTLILTVFSVGIALGSMLCEKLSGRKVEIGLVPFGSFGLTVFGLLLWWHSGGFPQNVQANDWLAVLSYGQAWWVLLDILGLGVFGGFYIVPLYALIQSRTAENERARVIAANNILNALFMVVSAIVSILLLSVAKLSIPELFLVVSLLNIAVNTYIFKIVPEFTMRFMIWLLSHSMYRVEHRNLQAIPDEGAALLVCNHVSFVDALLIGGAVRRPIRFVMYYKIYRLPVLNFIFRTAGAIPIAGRHEDIQIYEKAFARIAQYLKDGELVCIFPEGKLTADGEMNEFRGGVTRILEETPVPVIPMALQGLWGSFFSRDPNKGFFHRIWSRVVLVAGEPVTVEAATPEQLQVVVGGLRGSVR
>NZ_CP023969.1|WP_098952186.1|5983205_5984354_-|TDT-family-transporter
MTCSTTHRYKPFSHLTRPREVIRQFTPNWFAATMGTGVLALALAQLPVNLPGLHAVAEGLWLFTIGLFVLFSVLYAARWVMFFHEARRIFGHSTVSMFFGTIPMGLATILNGLLLFGLPRWGGDVIPLAEALWWLDVAMSLACGVLIPFMMFTRQEHSIDQMTAVWLLPVVAAEVAAASGGLLAPHLADAHSQLVMLVTSYVLWAFSLPVAFSILTILMLRMALHKLPHANMAASSWLALGPIGTGALGMLLLGTDAPAIFAANGLASVGEMAHGLGLIAGITLWGFGLWWMLIAVLITLRYLRAGIPFNLGWWGFTFPLGVYALATLKLASLLQLEFFSVFGSVLVVALALMWLIVAKRTVQGAYKGELFVSPCIAGLANK
>NZ_CP023969.1|WP_098952188.1|5984465_5985653_-|MFS-transporter
MPSVISQRSSLAFLVITVLTFLAASSAPTPLYQVYQDHLLFSAAMLTAIFGVYAVSLLAALLTVGSLSDYLGRKPVIFAALLLNIVAMLLFIVADSTSYLLAARALQGFATGTATAVLGATLLDTDRVRGPMLNSLAPMLGMASGGLGSGLLVEFAPWPTQLIYFTLLGLMVLQALYVWRLPETVSRIPGALKSLAPTLHVPPQARRALWLAMPLNVAVWALGGFFSSLAPSLVRVATGSTSHLIGGGLVAVVTLSGAVMIYSLRNHAADRVMRLSAALLAVGVGLLLVAVNTASLWLFFVASVIAGLGFGGGFMGSVRSIVGLALPHERAGLMSAFYVLSYLAFCIPALLAGNLSRVFGLIATTDGYGAVLILLSLGALVGLLMRDSAQARASA
>NZ_CP023969.1|WP_032892573.1|5985744_5986284_+|TetR/AcrR-family-transcriptional-regulator
MAIKEGLRPGGRSARVQESVHRAVRELLENHERSSVTVPMIAACAGVTPSTIYRRWGDLSVLLADVALARMRPDTEPANTGSLRGDLQAWAEQYLDEMSSDVGRNMMRDVQSSPTPGYCVSILSGQLQVIVDRYPQEQPPSVDHLINLLAAPTVFRILFSAQPLAVEELHALIELALKA

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Crispr_ID: NZ_CP023969_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_26

6010316-6010413

Orphan

Consensus_repeat	Method
GCAAGCCCGCTCCCACAGTTTGATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_26

>merge|NZ_CP023969|26|6010316-6010413|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTTGATCGCGGGGTGTCAGAGAGATAGGCGTCGGCTGGCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTTGATCG

>NZ_CP023969|26|25|6010316-6010413|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTTGATCG	CGGGGTGTCAGAGAGATAGGCGTCGGCTGGCAGGCCGTCATCGCAG
GCAAGCCAGCTCCCACAGTTTGATCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_098952212.1\|6015659_6017627_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP023969.1\|WP_032892594.1\|6007496_6008192_-\|porin-family-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP023969.1\|WP_044273038.1\|6012068_6012860_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP023969.1\|WP_098952214.1\|6019353_6020115_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180440
NZ_CP023969.1\|WP_014717756.1\|6022918_6023683_+\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP023969.1\|WP_098952211.1\|6014810_6015623_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP023969.1\|WP_098952202.1\|6004273_6005935_-\|M24-family-metallopeptidase	unknown	unknown	gnl\|CDD\|181058
NZ_CP023969.1\|WP_098952213.1\|6017740_6019153_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP023969.1\|WP_138183588.1\|6008430_6008544_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023969.1\|WP_032892586.1\|5997330_5998053_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|223880
NZ_CP023969.1\|WP_032892587.1\|5998077_6000363_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP023969.1\|WP_003190086.1\|6008572_6009784_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP023969.1\|WP_098952208.1\|6010827_6011931_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP023969.1\|WP_098952200.1\|6002405_6004145_+\|dipeptidase	unknown	unknown	gnl\|CDD\|235720
NZ_CP023969.1\|WP_003190068.1\|6021960_6022659_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NZ_CP023969.1\|WP_098952216.1\|6020343_6021351_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP023969.1\|WP_098952197.1\|6000388_6001036_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP023969.1\|WP_178081030.1\|6013713_6014484_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225605
NZ_CP023969.1\|WP_098952198.1\|6001092_6002310_+\|phospholipase	unknown	unknown	gnl\|CDD\|197206
NZ_CP023969.1\|WP_098952204.1\|6006012_6007500_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_098952212.1\|6015659_6017627_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	8.02007e-63
NZ_CP023969.1\|WP_032892594.1\|6007496_6008192_-\|porin-family-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	2.31465e-18
NZ_CP023969.1\|WP_098952208.1\|6010827_6011931_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.07606e-147
NZ_CP023969.1\|WP_098952214.1\|6019353_6020115_-\|SDR-family-oxidoreductase	gnl\|CDD\|180440	PRK06172, PRK06172, SDR family oxidoreductase.	5.50731e-161
NZ_CP023969.1\|WP_014717756.1\|6022918_6023683_+\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.4331e-75
NZ_CP023969.1\|WP_098952211.1\|6014810_6015623_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	2.41576e-30
NZ_CP023969.1\|WP_098952202.1\|6004273_6005935_-\|M24-family-metallopeptidase	gnl\|CDD\|181058	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated.	9.23777e-64
NZ_CP023969.1\|WP_098952213.1\|6017740_6019153_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.82793e-111
NZ_CP023969.1\|WP_032892586.1\|5997330_5998053_+\|energy-transducer-TonB	gnl\|CDD\|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	4.58882e-13
NZ_CP023969.1\|WP_032892587.1\|5998077_6000363_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.29061e-56
NZ_CP023969.1\|WP_003190086.1\|6008572_6009784_-\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.50267e-176
NZ_CP023969.1\|WP_044273038.1\|6012068_6012860_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.79678e-18
NZ_CP023969.1\|WP_098952200.1\|6002405_6004145_+\|dipeptidase	gnl\|CDD\|235720	PRK06156, PRK06156, dipeptidase.	0
NZ_CP023969.1\|WP_003190068.1\|6021960_6022659_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	4.87177e-130
NZ_CP023969.1\|WP_098952216.1\|6020343_6021351_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_CP023969.1\|WP_098952197.1\|6000388_6001036_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	5.8619e-24
NZ_CP023969.1\|WP_178081030.1\|6013713_6014484_+\|hypothetical-protein	gnl\|CDD\|225605	COG3063, PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion].	0.00035187
NZ_CP023969.1\|WP_098952198.1\|6001092_6002310_+\|phospholipase	gnl\|CDD\|197206	cd09107, PLDc_vPLD3_4_5_like_2, Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins. Putative catalytic domain, repeat 2, of vertebrate phospholipases D, PLD3, PLD4, and PLD5 (EC 3.1.4.4), viral envelope proteins (vaccinia virus proteins K4 and p37), and similar proteins. Most family members contain two copies of the HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified into the phospholipase D (PLD) superfamily. Proteins in this subfamily are associated with Golgi membranes, altering their lipid content by the conversion of phospholipids into phosphatidic acid, which is thought to be involved in the regulation of lipid movement. ADP ribosylation factor (ARF), a small guanosine triphosphate binding protein, might be required activity. The vaccinia virus p37 protein, encoded by the F13L gene, is also associated with Golgi membranes and is required for the envelopment and spread of the extracellular enveloped virus (EEV). The vaccinia virus protein K4, encoded by the HindIII K4L gene, remains to be characterized. Sequence analysis indicates that the vaccinia virus proteins K4 and p37 might have evolved from one or more captured eukaryotic genes involved in cellular lipid metabolism. Up to date, no catalytic activity of PLD3 has been shown. Furthermore, due to the lack of functional important histidine and lysine residues in the HKD motif, mammalian PLD5 has been characterized as an inactive PLD. The poxvirus p37 proteins may also lack PLD enzymatic activity, since they contain only one partially conserved HKD motif (N-x-K-x(4)-D).	2.0052e-55
NZ_CP023969.1\|WP_098952204.1\|6006012_6007500_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	5.81246e-128

>NZ_CP023969.1|WP_003190086.1|6008572_6009784_-|sodium/glutamate-symporter
MLQLDFYSTLVAASLVLLLGRGLVARIGFLRTYNIPEPVAGGLLVAMLLLALRGFADIEVRFDPSLQTPLMLAFFATIGLNADFASLKKGGRILAVFLLVVTGLLVVQNAMGIALASALGLDPLMGLLAGSVTLSGGHGTGAAWGAVFSEQYGVASASELAIASATFGLVLGGLIGGPVARFLIKRVEVPGIGQPQSSLAKGFEQPNEERLITAFSFIETLALVAISLQGGNLLNAAIQGTAFELPTFVCVLFVGVVLRNGLSMLGWHQVFEREVSVLGNVSLSLFLAMALMSLKLWDLAALALPIVILLAAQALLMALFAIFVTFRVMGRNYDAAVLAAGHCGFGLGATPTAIANMQAVTQRFGPSQIAFLVVPMVGAFFIDIANAVVIKLYLALPFLGTAG
>NZ_CP023969.1|WP_138183588.1|6008430_6008544_-|hypothetical-protein
MTRASVAATARDAVSLDVLLAVDASAARAVTRTLIRT
>NZ_CP023969.1|WP_032892594.1|6007496_6008192_-|porin-family-protein
MQISKSVPVLLLATSAIYMSQAIAAPADEEGYYGVARVISAERKARNMDSSARPGIGSFVPGDDSQKDMTGSIGVGYRFGNGWRVEGELTLPQSDTFTSGSTAFPTSLNQHHIDSRRVMLNAYRDFRITEKLAIYGSAGLGLARLESKGWQGNESRQYGASTQTNLAWSVGAGVAYDVTDRLALDLGYRYVDMGDTESGWNNFANARGLQDEKMKANLVSSEFSLGMRWAF
>NZ_CP023969.1|WP_098952204.1|6006012_6007500_+|PLP-dependent-aminotransferase-family-protein
MVQMRKWRPLLRLEEGTTQASYRKIAEGLVNAILEGRLPPGTLLPGTREMAQLLNVNRKTVILAYEEAMTKGWLVSEPRRGTFVNAQLTPKQLPSVTQPSFAPPLLEQPRVPYFTHNAQVVALQRRRDALFFDNGTSDHRLLPQAVLHRYYRHALRNSFASNTVRYGSEGTGYHLRCALAEMLRNNRGLTVTAENICLTQGTQMSLYLSASLLLKPGDVVLVERLSYPPAWEIFRKLGAQLVTVDIDDEGCRTDQVERLCREHNVRMIYLTPHHQFPTTVSLHAARRQHLLALAAQHDFCIIEEDYDHEFHFNGRPYLPLASERSQRHVIYIGSLSKTLGSTFRCSYVVAPAQVIEVLHRNAALMLGDADAVAQRMLADLINDGELKKHLRRVSKEYRARRETLQNCLHEALGERIQLREPEGGLALWVRFEEGINVDRMVATAVDHGLVVRSGRQFSPLDQPQNALRLGFASLNQDEIREATLRLAKACGEGAC
>NZ_CP023969.1|WP_098952202.1|6004273_6005935_-|M24-family-metallopeptidase
MNTRHVIELSPSGKTFEAGDELLLDAMLASGLAVPFSCRRGACGSCKVVVAEGEYRGKRLAPGALAPSYPLAANEMLLCQSHACGDMRLHIPGWSLDTPALVVAAQVHSKRALGPDVIELVLMPETPVAVRAGQYLKFCLADGDTRCFSVANLPAEDDGRLVFQIRRVSGGYFSEGILSGLAVGERLHVEGPFGACTWQDDEAAPVVLFATGTGYAGIKPILLTALKRDVDVTLYWGGAQSADFYDSAFLDHLMLEHPRFRWHCVRSSEGRVQEVAMSHGHQWEQAQVYACGNAAMLGQVRAHCLEAGLPSHRFIAEAFVASGRSGAETGSLLFDPVWEKVGPRYSLDGMLAAREKSMRALAAIASQLKVGMTTGEALEMAARQLQAMGASHTWHPTYIRFGADTVRPPREGIDRQRRLRADDIAVVDLGPVWDGYEGDYGDTFVFGDGPLHQACTTALHEVFDETRQAWLRGLTGRELYDFAEQSALSKGWRLARNLAGHRLADFPHALFESKELADLEISPSEMAWVLEIQLCHPTEPVGGFFEDMLMMQG
>NZ_CP023969.1|WP_098952200.1|6002405_6004145_+|dipeptidase
MHFPLKKLVAATLFAASLSAIATPASANITADQSTAILKHFSETSVTDFRSFLGTLAKGELGKTADTGPAINAFLGNKTLSAEQQNEINRLLGIYTRVKYGKAALETLRELVEIPTFNVDGLPQYKNPEFLKIAAKIEALAKSFNLNFRNVDNRVYEISLEGSGDEVVGVHAHADVVPVTPENWVLQDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTMYAMKVIKEEKLPLARTFKLLVDTTEETSGEAIPYYFERNPVPQYNLALDGGYPVVIAEKGSGTVMATFPVRKGEGKGAEIIAMTGGKANNQIPSASVATLVSDAPAELAASLQQAGADYAKRNGGNFQVTAKVDGKDVKLTVTGVSAHSSEPETGVNPVARMLELIHSLDGKVALKHNHITDAARYAADNWGLDYLGGKLGVGYADDFMGPLTTSLTFVGQDDKAFKLAVNLRAPKGKTPEALKAQIEQKLNAWDKNAKVNVSFTYSLDTPMYRNPEGEWVKALLAVATENLGMAHKFGTSAGATSVHDLPNGVQFGLARPEEKYTGHTDSEFKTVEQFLLDLQIVTEMMGRVGQLPKL
>NZ_CP023969.1|WP_098952198.1|6001092_6002310_+|phospholipase
MSLSIKLRIAGLTGLLLSPLAQADFSIPGFELVHTVPVDTALGTDDLRQPGPVWIELFDGAKSRIDIGQFYAADHPGSVMNTVLEHLEAAGKRGVKIRFLLEEKGIKLSDAATLERLRAIPNLTLRVLPYGQLSGGIIHAKYLLVDGKQAFVGSQNFDWRALEHIHETGLRITDETVVGQVQAIFEQDWQAQAALAGKQPVPLPANGQAPARTGNYLVASPQRYNPPGVGDSQLELPRLLGEAKKEVRVQLLDYAPLSYGPDRTRPYYAVIDNAVRAAAARGVSVKLMVSNWNTDPLELPYLKSLAVLPNVEIKIVTLPEAKQGFIPYARVIHSKTMEIDGQVAWVGTSNWLGGYLDNSRNLEVVMRSEAMAKRVGQLHQQLWDGPYARALSVTEEYPAPHPGQH
>NZ_CP023969.1|WP_098952197.1|6000388_6001036_+|MotA/TolQ/ExbB-proton-channel-family-protein
MDMNLLHDVTFYVMYAAMAIAIFIAIERGIYFAYVRRQARALIDALGTNVHNERDLPENLTRRDSLPLNMILPVLAQKATHGSRKDLDDEIDTQYLKTRAPLARSLWIIETITTAAPLLGLLGTILGIIDTFKALATAGVSDPGQISGGIGTALFATGLGIAIALFCVVFHNFFQDSLERINDQLKILLIRAATGARAQDEVPHRVPTPLHSRTA
>NZ_CP023969.1|WP_032892587.1|5998077_6000363_+|TonB-dependent-receptor
MKFTRIHLALVAATSMTQGMVMAETSDSDVGTIGVQGKATAGGGYMVPEESIKGRSTVTKEALDKQAATGNAIDKLKYTPGLNISSEDNTGLSGFRFTMRGMNSDQVGMSVDGMPINDSGNYALYSNLLGDPENIDQIFVTQGAAESDGPHIGSSGGNIGIVTIRPTKETGAFVKQVVGSNATRKTFARLNTGEINGLSNWLSVSHTEGEMWRGSGAVRADKVEWNSFFDAGNGNTANLILKYHEQDNNSYSQLTKAQFQQNGRKYDPYPATPSVGSNGKYNSYYALAQNPFQTFTAVLNTQFKLADNLALSVIPYYYWGNGSGVGSSSYPLNRGSNQGGVFDLGNLPTAAQYNADGTPNSGVYYRPSRTQTWRPGITTKLTWDLGDHSLQFGYWYERARQSQTQPFIPLKSNGKPVDTWPDSNSAIVDANGNTVQGRDRFTVTPAQKVWAQDTWYINPDWTFIAGLAYMNVEREGTNHGSLNERPEKRNQTYNKLLPNAGLKYQLDERDQLFYSLSRNMRVPQNYVLYDKGAGSIDAEPETSWNHELGWRYSGDDMSLAATLFYMDFKNRQVSSRDINGDFADINAGSVVNKGLELEWSGQLPHHFNYYTSYTYTKAEQQDDLTVYNAGKPIVLPTSGKQFANVPKNMLAANIGYDDGRFYGTFGGKYTSKLYGDLTNDEAISGRTVFNLGAGIYLPVDKKVVKDATLRLNVDNLFDKKYLDGVYTTKTNAASYSGFRDGDPAYIVGLDRTVTVSLEANF
>NZ_CP023969.1|WP_032892586.1|5997330_5998053_+|energy-transducer-TonB
MYVLFRARQLLGSVPALIALVLIALGIQSQTLKVEPVYDESAVELALVEPEPEVVPEPVVEQEPPPPVIEEEEAEPAPPPPPPKPLPKPEPKPKPKPVPKPAPVVAKPAPTPPPVAAKPAPVAQAAPTPAPPAPPKVDGQALESGYLKGLRNELDTYKQYPTGRQASLERPSGEVVVWLLVDRQGRVLDSGLQTQASSMLLNRAATNSLRRIKQVKPFPEQAFGGRNEQRFTATFNYSVQ
>NZ_CP023969.1|WP_098952208.1|6010827_6011931_-|polyamine-ABC-transporter-substrate-binding-protein
MSRAHLRAIFLASFMGAVISTPAAAAENSVYLYNWFGFLEPQTPKQFQQESGIKLHMDAFDSAETMQSKVMAGRTGYDLVVATSNVLPGLIKAGVLQPLDRAQLSNLSHIDPDILALLAVNDPGNRYAVPYVWGTTGIGYDVDKVKAALGDDAPVDSWDLIFKEENISKLKSCGVAMLDSPSEIISIALHYLGLPSNSTDPEDYQKAQALLLKIRPYVLYFDSSRIDTDLADGNICAVVGWANGALAAQAINEKSNSGRKIAYSLPREGALVWSENWVLLKDARHPKAALEFINYMLRPQVIAKTSNYMLYPNANKDATKFVEQKLRDNPWIYPDKKTMATLVPLEPLPLKAERIRTRVWTKVKSGT
>NZ_CP023969.1|WP_044273038.1|6012068_6012860_+|response-regulator-transcription-factor
MSLDLHSLAWHRSVGKLIMQLNRPEFWSSLIRVLNEYVQIDNWVVLVFGDHAVRVISLPEVADSEEIDAFIHRYVKGLYLLDPFYIADRENPQSGFFHLLDIAPEHFRETEYYQQYFAQYISVDEAQYNVRLDADRTLCMSFGSNLRFTQAQITVLDMIKPWVTAMMHQRMGFETDPAKNLAEPTPWAEALTQLETHVTTREKDVLKLLLSGFSNKEIAGKLSLSTETIKVHRRNIYSKLNIKSQSELFARFFMPRQEITSTL
>NZ_CP023969.1|WP_178081030.1|6013713_6014484_+|hypothetical-protein
MTPLMITLLVIAGIVILIAIGYMNHVVENNKLEKKRTEIELNDRLRRCGEITETFPGQLMTPALKLLLARLELNVNQRLLNLNKSSTPLKARINELNALIAQGESIPVANPPAPIQTEAKAKDVRFLLEALHGQVTRAAQDGFLPTNEAKHWIKEIRHILVLLHIEFFNNLGQHALLQGQPGQARLAFERGVQYLRKQPEPVLYSAQLQLLESQLAPANSTVLTNSQPAEDEVNELTEGLKVVDADAEWKKKAIYD
>NZ_CP023969.1|WP_098952211.1|6014810_6015623_+|alpha/beta-fold-hydrolase
MPVAVIDGQPLHYIDQGAGPVVLLGSSYLWASDMWAPQIEALSQQYRVIVPELWGHGESGPLPAPTHSLDDLARQALALLDHLDIAEANLVGLSVGGMWGARLALLAPERINSVVLMDTYLGAEPEATCQYYFSLFKMIEDAGAIPEPLLDVIAPIFFRPNIDRESALYQDFRQSLQSFPKERLLDSIVPLGRLIFSREDILAQLPALDSDTTLVMCGEQDKPRPPAESEEMAELIGCSLILIPEAGHISSRENPDFVNEALLTFLANHA
>NZ_CP023969.1|WP_098952212.1|6015659_6017627_-|methyl-accepting-chemotaxis-protein
MISGVQRRFANLGMAKKLGLGFTLVLLLTALVAAIGVWSLQTIGQRFEGLTSMSTLNSDLLKVRLIEQDYALHADAKAVDALHASVDALLAQATRLKARSASNERVMGDVEQALVAYRKAFDEFVELTQTKDLALEMASWSVSSVANNLDVLQAGLADDGAYGLKESQGKEGAEFIEQAGQVSQVSRLMLQAMNEARVRLDQSRRADADDAGQGKIEQADQALAEVEKLKTTVKDPGYQTVLNEVSGHIASFSDKLGEYTGLLAQEKVVYTQLHDRAEQVVSRVNQAYAAEDQSMQTQLQHSTLLIIGSSALALLVGLIAAWVITRLIVAPLRAVIAVAQQIASGDLSGRMEVSRRDEIGQLMQAMQQMGNSLSQMVSGLQTGIEQLASSAHSLSSVTEQTTAEVSNQKDETEQVATAMNQMTATVHDVARNAEQAAQAAQTADAKVDSGQQVVRMSLQRIELLATSSSSASASIESLSAQIQNIGTVLSVIQSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTQQSTEEIERLVSTLRSAAQSSVQQIQQSGELVKLAVSDALETEGALGSIAAAVSLIQQMNQQIAAAAEEQSSVAEEINRSVTSIRASADHSALSMQDNAASSIQLAQLGAQLKGMVGHFRL
>NZ_CP023969.1|WP_098952213.1|6017740_6019153_-|PLP-dependent-aminotransferase-family-protein
MDLGIDRQAQVPVVQQIVSAVAEWIRKEGVSPGTRLPSIRQLALDNLLSQASVIEAFERLVAQGLLAPRQGSGFVVAQPTTAHENHWYEGAEQGWGAFTDGPLGELKLGCGWLPDTWRESDDISYAIRELSRTDTGGLFNYSTPLGLPALREQLLKRLTQIHVPASLDRILTTHGASHAQDLLIRTLLKPGDKVVVETPGYGNLYRQLAFQGVTLLHVPRTRGGPDIPALEALLHTHRPKCLFINSLYHNPTGTSLSRPVAERLLELARERDFLIIEEDVYGDLQHASCTRLAALAHDDRVIYVSSFSKTLSSALRVGYLCASAAIISQLAQLKTLTGIGTSRFAEAMVTTLLTNGTYRKWVQRLRKRLNAQMAATLQVLEDEEWQVFAAPAGGMFLWARPGLADPSRLQACAQRLGVLLSPGALFSPTGERSEWLRINVAYAADQRALTLFRAMGAARSTSTILKTTHM
>NZ_CP023969.1|WP_098952214.1|6019353_6020115_-|SDR-family-oxidoreductase
MSMTFSGQVALVTGAAAGIGRATALAFAAEGLKVVVADLDVAGGEGTVALIHQAGGEGIFVRCNVTLDTDVQQLMAQTVATYGRLDYAFNNAGIEIEKGKLADGSLDEFDAIMGVNVKGVWLCMKYQLPLLLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKKIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEIASAVLYLCSDGAGFTTGQALAVDGGATAI
>NZ_CP023969.1|WP_098952216.1|6020343_6021351_+|NADP-dependent-oxidoreductase
MTAQTNRQFLLAKRPVGAATRETFTYQEVPVGEPQDGQVLVRNEYLSLDPAMRGWMNEGKSYIPPVGIGEVMRALGVGKVLASKHPNFAVGDYVNGALGVQDYFLGEPRGFYKVDPKLAPLPRYLSALGMTGMTAYFALLETGAPEAGDTVVISGAAGAVGSIAGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAIDYKSEDVPAALKRECPKGVDVYFDNVGGDILDAVLSRLALKARVVICGAISQYNNKEAVKGPANYLSLLVNRARMEGFVVMDHAANFAAAGQEMAGWMAQGKLKSKEDIVEGLETFPETLMKLFNGENFGKLVLKVS
>NZ_CP023969.1|WP_003190068.1|6021960_6022659_-|orotidine-5'-phosphate-decarboxylase
MSVCQTPIIVALDYPTRDAALKLADQLDPKLCRVKVGKELFTSCAAEIVGTLRDKGFEVFLDLKFHDIPNTTAMAVKAAAEMGVWMVNVHCSGGLRMMSACREVLEQRSGPKPLLIGVTVLTSMEREDLAGIGLDIEPQVQVLRLAALAQKAGLDGLVCSALEAQALKNAHPSLQLVTPGIRPTGSAQDDQRRILTPRQALDAGSDYLVIGRPISQAADPAKALAAVVAEIA
>NZ_CP023969.1|WP_014717756.1|6022918_6023683_+|response-regulator
MHTPCDPVNEAPKDAVIAEDKRWNTRALIVDDDVPIRELLIDYLARFNILASGVTDGTAMRQAMQAETFDVVVLDLMLPGEDGLTLCRWLRAESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDDRTEQRANIRFDTWRLNSVLRQLVADDGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKAPQLIKTVRGEGYLFDARDIG

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Crispr_ID: NZ_CP023969_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023969_27

6031619-6031713

Orphan

Consensus_repeat	Method
GCAAGCCCGCTCCCACAGTTGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023969_27

>merge|NZ_CP023969|27|6031619-6031713|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGATTGTGGGGTGTCAGGTGGACAGGTGTCGGCTGGCAGGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTGGA

>NZ_CP023969|27|26|6031619-6031713|CRISPRCasFinder
GCAAGCCCGCTCCCACAGTTGGA	TTGTGGGGTGTCAGGTGGACAGGTGTCGGCTGGCAGGCCGTCATCGCAG
GCAAGCCAGCTCCCACAGTTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023969.1\|WP_032892620.1\|6031718_6032168_-\|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl\|CDD\|224973
NZ_CP023969.1\|WP_098952236.1\|6036788_6038690_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP023969.1\|WP_044273032.1\|6023682_6024714_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP023969.1\|WP_003190033.1\|6039466_6040687_+\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_CP023969.1\|WP_014717756.1\|6022918_6023683_+\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP023969.1\|WP_056788499.1\|6028142_6028946_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023969.1\|WP_169918652.1\|6033782_6035864_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|227112
NZ_CP023969.1\|WP_003190063.1\|6025233_6026298_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|182881
NZ_CP023969.1\|WP_003190035.1\|6038939_6039455_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	unknown	unknown	gnl\|CDD\|179953
NZ_CP023969.1\|WP_098952220.1\|6026370_6027189_-\|DUF4892-domain-containing-protein	unknown	unknown	gnl\|CDD\|374449
NZ_CP023969.1\|WP_098952240.1\|6043105_6044128_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|368185
NZ_CP023969.1\|WP_098952230.1\|6032522_6033548_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
NZ_CP023969.1\|WP_098952222.1\|6027291_6028146_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP023969.1\|WP_098952238.1\|6041383_6043009_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP023969.1\|WP_003190068.1\|6021960_6022659_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NZ_CP023969.1\|WP_098952216.1\|6020343_6021351_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP023969.1\|WP_098952224.1\|6029043_6029487_-\|hotdog-fold-thioesterase	unknown	unknown	gnl\|CDD\|182360
NZ_CP023969.1\|WP_098952234.1\|6035865_6036792_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225531
NZ_CP023969.1\|WP_003190047.1\|6032164_6032512_-\|DUF4389-domain-containing-protein	unknown	unknown	gnl\|CDD\|379561
NZ_CP023969.1\|WP_098952226.1\|6029517_6031167_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341255

Protein	Function_ID	Function_description	E-value
NZ_CP023969.1\|WP_032892620.1\|6031718_6032168_-\|phosphohistidine-phosphatase-SixA	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	9.58364e-33
NZ_CP023969.1\|WP_098952236.1\|6036788_6038690_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.02467e-94
NZ_CP023969.1\|WP_044273032.1\|6023682_6024714_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	7.75384e-45
NZ_CP023969.1\|WP_003190033.1\|6039466_6040687_+\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_CP023969.1\|WP_014717756.1\|6022918_6023683_+\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.4331e-75
NZ_CP023969.1\|WP_056788499.1\|6028142_6028946_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.83124e-13
NZ_CP023969.1\|WP_169918652.1\|6033782_6035864_+\|TonB-dependent-receptor	gnl\|CDD\|227112	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism].	1.3477e-31
NZ_CP023969.1\|WP_003190063.1\|6025233_6026298_-\|AI-2E-family-transporter	gnl\|CDD\|182881	PRK10983, PRK10983, AI-2E family transporter YdiK.	7.71645e-69
NZ_CP023969.1\|WP_003190035.1\|6038939_6039455_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	gnl\|CDD\|179953	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase.	2.63383e-129
NZ_CP023969.1\|WP_098952220.1\|6026370_6027189_-\|DUF4892-domain-containing-protein	gnl\|CDD\|374449	pfam16234, DUF4892, Domain of unknown function (DUF4892). This family consists of uncharacterized proteins around 270 residues in length and is mainly found in various Pseudomonas aeruginosa species. The function of this family is unknown.	2.93758e-100
NZ_CP023969.1\|WP_098952240.1\|6043105_6044128_-\|amidohydrolase-family-protein	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	1.6365e-11
NZ_CP023969.1\|WP_098952230.1\|6032522_6033548_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	6.11514e-169
NZ_CP023969.1\|WP_098952222.1\|6027291_6028146_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.35903e-21
NZ_CP023969.1\|WP_098952238.1\|6041383_6043009_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	7.03436e-66
NZ_CP023969.1\|WP_003190068.1\|6021960_6022659_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	4.87177e-130
NZ_CP023969.1\|WP_098952216.1\|6020343_6021351_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_CP023969.1\|WP_098952224.1\|6029043_6029487_-\|hotdog-fold-thioesterase	gnl\|CDD\|182360	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase.	1.79885e-47
NZ_CP023969.1\|WP_098952234.1\|6035865_6036792_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|225531	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	2.28248e-32
NZ_CP023969.1\|WP_003190047.1\|6032164_6032512_-\|DUF4389-domain-containing-protein	gnl\|CDD\|379561	pfam14333, DUF4389, Domain of unknown function (DUF4389). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 104 and 223 amino acids in length. There is a single completely conserved residue R that may be functionally important.	7.31936e-29
NZ_CP023969.1\|WP_098952226.1\|6029517_6031167_-\|AMP-binding-protein	gnl\|CDD\|341255	cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase. The members of this family are bacterial long-chain fatty acid CoA synthetase. Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase in this family is involved in the synthesis of isoprenoid wax ester storage compounds when grown on phytol as the sole carbon source. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0

>NZ_CP023969.1|WP_098952226.1|6029517_6031167_-|AMP-binding-protein
MPVAFRLPLQVFFEREARHPRKVFLVQPIGGGEVQTLTWGEVGHQARCAAHWLRARKLPLGSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTAESVAHVLTHSQARLALIGKLDDWPAMAPGVPAGVPTISLPLCPEGTFDFSWMDLQACSPIQDNPLPDAASLATIIYTSGTTGLPKGVMHSFGALGFAATRGTELFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVFFAESLETFLTDLRRARPTALFGVPRIWTKFQLGVYAKIPEKRLDTLLRLPFIGKRVGHKVLAGLGLDALRIALSGAAPVPEALLRWYQRLGLDVLEVYGMTENCGYSHVCRPGGQTLGWIGQPCPGVQVRIDPSGEVQVHSGATMLGYFKDPQKTADTLTADGFLRTGDKGEQDADGRLRLTGRLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGEGLSAPIGLCVLSGPCEDRHALGSGLQRWLAQVNAGLDKHERMGQLVVVKDHWAVENGFLTPTLKIKRNVIESTYGPHLQAWSARGETVLWQD
>NZ_CP023969.1|WP_098952224.1|6029043_6029487_-|hotdog-fold-thioesterase
MSLWRTQPNIEHLNAIQKNTIGELLDIRFESFDDESLTASMVVDHRTHQPYGLLHGGASVVLAESVGSMAAYLCIDASKFYCVGLEVNANHLRGVRSGRVTAVAKAIHIGRTTQVWDIRLSSDEGKASCVSRLTMAVVPLGEQQPAR
>NZ_CP023969.1|WP_056788499.1|6028142_6028946_-|alpha/beta-hydrolase
MSQHVFFTHANGFPSATYGKLFAALAPEYAVAHLPQHGHDPRFPVDDNWQNLVDELIHHLEQQPEPVWGVGHSLGGVLHLHAAMRCPHLYRGVVMLDSPVLTRADRWVIRAAKRFGFIDRLTPAGRTLGRREEFTDLDTARSYFAGKTLFRGFDPDCFDAYLQHGLQQVGDRLRLRFDPATEISIYRGVPHTSPGQVRQLKVPLAVVRGRQSRVVMRHHASGVDRLPMGEMLTMPGGHMFPLERPQDTAALIKTLFARWQARERNCA
>NZ_CP023969.1|WP_098952222.1|6027291_6028146_-|alpha/beta-fold-hydrolase
MSTPVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLHGLRIVALDMAGHGHSAHRPAGAGYALWDYVYDVLQVAEQLGWKRFALLGHSLGAIVSLVLAGALPERVTHLGLIDGVIPPTASGENAAERLGMALQAQLSLQDKRKPVYNSLDRAVEARMKGVVAVSREAAQLLAQRGLMPVPGGYTWRSDSRLTLASPMRLTEEQAMAFVRRVGCPTQLVVAADGMLAKHPELLSQLPFTVTTLPGGHHLHLNDEPGAALVADCFNRFFSTP
>NZ_CP023969.1|WP_098952220.1|6026370_6027189_-|DUF4892-domain-containing-protein
MSLGKGSIRALGLCCFSPLVFAADLPGSQDLPAVARQVDAQIVDYRPAEDKERIYPMGAIRKISGQLRYEGQAIARGPATAITYELPAEHSSSAAFTATREALQAKGAQLLFWCKARDCGESSLWANEVFGNAKLVGADGQQEYLLLRLAAPQDNSLVALYGITRGNRRAYLHVEQLDASAPLGDLLPTSATLLRELKSTGELDFPALGAEPDDTWLTLISRALNLDTTLRVSLSGPKAEAWRQALVEKGVRTARLETGSGETQGLHLHLIR
>NZ_CP023969.1|WP_003190063.1|6025233_6026298_-|AI-2E-family-transporter
MLNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLGGRESLAAGILTLGWMLLVAVPLVWLGFNLADHVRDAVALIKDIQVDGLPEAPTWLGSIPFVGERLVATWDSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVFFFYRDGPRLAMFVHRLLERLIGERAGYYIELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLTDWSASQAQVRREDKPCN
>NZ_CP023969.1|WP_044273032.1|6023682_6024714_+|HAMP-domain-containing-protein
MRAPFNTLFGRLFGLLLVAIVLAHVLAFFWFHHYGPPPPPRAAFVEQPDGSLTPLRKAPRPWFGGPVVPLTFQFISLIIAAWYGAKLLSRPIQRLSAAAERLSVDLDSPPLVESGPREARQAASTFNLMQKRIREQVSQRARMLGAVSHDLRTPLSRLKLRLEQIEDPKLQGQMRQDLDDMIGMLDATLSYLHEQRTSETRHWLDVQALVESLSENAQDQGRDVQFSGTCTPLQVQPMALRSCLNNLIDNALRYAGTARVELADSRGALVIRVIDHGPGIAADKREAVFEPFFRLEGSRNRNSGGVGLGMTIAREAVERLGGHLSLEDTPGGGLTAVMWLPRV
>NZ_CP023969.1|WP_014717756.1|6022918_6023683_+|response-regulator
MHTPCDPVNEAPKDAVIAEDKRWNTRALIVDDDVPIRELLIDYLARFNILASGVTDGTAMRQAMQAETFDVVVLDLMLPGEDGLTLCRWLRAESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDDRTEQRANIRFDTWRLNSVLRQLVADDGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKAPQLIKTVRGEGYLFDARDIG
>NZ_CP023969.1|WP_003190068.1|6021960_6022659_-|orotidine-5'-phosphate-decarboxylase
MSVCQTPIIVALDYPTRDAALKLADQLDPKLCRVKVGKELFTSCAAEIVGTLRDKGFEVFLDLKFHDIPNTTAMAVKAAAEMGVWMVNVHCSGGLRMMSACREVLEQRSGPKPLLIGVTVLTSMEREDLAGIGLDIEPQVQVLRLAALAQKAGLDGLVCSALEAQALKNAHPSLQLVTPGIRPTGSAQDDQRRILTPRQALDAGSDYLVIGRPISQAADPAKALAAVVAEIA
>NZ_CP023969.1|WP_098952216.1|6020343_6021351_+|NADP-dependent-oxidoreductase
MTAQTNRQFLLAKRPVGAATRETFTYQEVPVGEPQDGQVLVRNEYLSLDPAMRGWMNEGKSYIPPVGIGEVMRALGVGKVLASKHPNFAVGDYVNGALGVQDYFLGEPRGFYKVDPKLAPLPRYLSALGMTGMTAYFALLETGAPEAGDTVVISGAAGAVGSIAGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAIDYKSEDVPAALKRECPKGVDVYFDNVGGDILDAVLSRLALKARVVICGAISQYNNKEAVKGPANYLSLLVNRARMEGFVVMDHAANFAAAGQEMAGWMAQGKLKSKEDIVEGLETFPETLMKLFNGENFGKLVLKVS
>NZ_CP023969.1|WP_032892620.1|6031718_6032168_-|phosphohistidine-phosphatase-SixA
MKVWILRHGEAQAHARTDAERNLTEHGRAEVLRSAAHLIGQPLGAIIASPYVRAQQTAQLVRDVLGFEREILTVPWLTPDEDVRQVLEKLDTDDDVLLVSHQPLVGNLISFLQHGHQRQPQPMYTASLAQLEGDFPLAGLMSLVDVKNP
>NZ_CP023969.1|WP_003190047.1|6032164_6032512_-|DUF4389-domain-containing-protein
MNDPKAAPPYESIVLRILWMLVFALVWQVAQFLLGALVVVQLIYRLIYGAPNLGLMNFGDSLSQFLAQIGRFGSFHTEQKPWPFADWPTPRAPEGEAAHSVPPAPHPVRDEEPKL
>NZ_CP023969.1|WP_098952230.1|6032522_6033548_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MTEQRPIAVLGGGSFGTAVANLLAENGHAVRQWMRDPEQAEAIRVHRENPRYLKGIKIHPAVEPVTDLLGTLTACDLCFVALPSSALRSVLAPHAERLAGKLLVSLTKGIEADTFKLMSEILTEIAPQARIGVLSGPNLAREVAEHALTATVVASEDEALCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLDEAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTDVDFISTSGFN
>NZ_CP023969.1|WP_169918652.1|6033782_6035864_+|TonB-dependent-receptor
MLACATCAQADDLFLDSQPLPQVLTATRLKQSAAAVPGSMTVIDSELIKASGARDISELLRLVPGMMVGYTSGNQASVNYHGTSASDARRMQVLIDGRSVYRAGLATVDWSDIPVAMEDIERIEVFRGPNTVSYGANALMAVVNILTRSPANSHGSRVKVIRGERGINDFYASQGVGWETGDLRLSLSGQQDDGFDSDAAGADRRDGRRLNRFSLAVSQTLNAQQSLDWQLNVKEGTNQRPYTYTPVFAGITEGGSNSDVTAKDYAGSLRWNFDFNPDHSLYIQGSAQQWDRKQIWKACDAKASFSPELTQLWQLNPNYAELLARHMDTYSQGSAPPGNAAEQALANQVLDQWRNGANQSVCGDIDQSTRESRYDLEIQDTLSLSDSLRLVSGMNYRYDRADSETYFNGTLDDTTWRLFGHLEWRASEHWLLQGGAMYEDTHLSGNSLTPRVAVNYLINPRHGLRAVYSEAIRSPDMFENNVNWSYRVTNLSSPTYGQNAGQYFVVTRGPGNLDKELMRSRELGYNGFFAELGLNVDVKLFYDEITDMISSPLRNNQYIASNANSARFSGAESQFDWRVSNADRLRLTYAYVDATSSNPRDKAQTARNSGAAGWLREWGQGWSSALFYYGDDALNQYRFQRVDLRVAKRIAVGKTNVELAGMLQQRLDNQPTTWADNNYDHRHVLYFSAELDF
>NZ_CP023969.1|WP_098952234.1|6035865_6036792_+|ABC-transporter-substrate-binding-protein
MADQSRMTLLVSRFWRRGLLLACLLLAAPAWSANILLTAAEDSAGVRAFTQALAQQRPDDQVSFTPLNALPAPRDLPASTRLILLDLPGLDWRLQDEQGPPTLVLRISRLQARQRLGNTHPAKISLLWSDPPLDRQLRLIAHILPQAQRVGVLYEAGSEFLLRELTQSAKPMGLEIVPQLWENTSDSRPLQNLFKNSDVLLGLDDPNLYNPKTVKNLLLSSYAQQLPLVGPNAGFVRAGSLASTYSDQADWLAVLNHLLDQPPANWPHTLYPQHFKVVGNPQVARSLGIEQVDEVAVAARLAEGEKRP
>NZ_CP023969.1|WP_098952236.1|6036788_6038690_+|response-regulator
MTLRRRWDINTRTQLITLGPALLLTLLLITFFTFVRIQDLRQELDHTGQLIANQLAPATEYGVISGNNDVLETLLRATLATPHVRFLEIQDSAENILVYVEQPSERHDRSLSVKVFQAPIRLQHIQLNNDFFQDNLNEPKAPRADYLGRVIVGMSNDAFSQRQQEILFKAGILALFALLFTFLLARRLSASLSKPISAMGHAVKAIQQGDYKTPLPIVDDSELGDLSRHINNLAEGLQQASREQQQAMAQLIQTREEAERANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTEMTEEQTEYAALASESTEHLLKVINDILDFSRIERAALELEHIAFNLADLINSCAQAFQHSAQQRGLSLELPIPMGMEALRVRGDPTRIRQILVNLIGNALKFTERGSVTVEPHWQTLDHELVWFTCTVRDSGIGISTERLELMFDAFQQADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEGRGSVFTLEIPLAIDQQHVPVAAPDALGKASAGDGRHVLLVEDNPVNRTVVEAMLRSLGFEVSLATDGAEAIRSAESLIFTAILMDCRLPLIDGYEATRQIRQLPGCADLPIIALTANALQGDREACLAAGMNDYLAKPFKRTDLQQILQRWVQ
>NZ_CP023969.1|WP_003190035.1|6038939_6039455_+|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA
MTKQNAFTREDLLRCSRGELFGPGNAQLPAPNMLMVDRITHISEEGGKYGKGELVAELDITPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGLPGRGRALGSGEVKFFGQVLPSAKKVTYNIQIKRVLKGKLNLAIADGSVTVDGREIYTAEGLRVGVFTSTDNF
>NZ_CP023969.1|WP_003190033.1|6039466_6040687_+|beta-ketoacyl-ACP-synthase-I
MRRVVITGLGIVSCLGNDKETVTANLRASRPGIRFNPEYAEMGLRSQVSGSIDLPLEELIDRKIYRFVGHAAAYAYLAMKDAIADSGLSEDQVSNVRTGLIAGSGGASTLNQMEALDILREKGVKRVGPYRVTRTMGSTVSACLATPFQIKGVNYSISSACATSAHCIGTAVEQIQLGKQDIVFAGGGEEEHWSQSFLFDAMGALSTQYNETPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQMAMSTVDTPIDYLNTHGTSTPVGDAKEMEGVRAVFGDKAPKISSTKSLSGHSLGAAGVHEAIYCLLMMEGNFMAGSANIDEIDPVVADMPILTKTVENAKIDTVMSNSFGFGGTNATLVLKRWQGK
>NZ_CP023969.1|WP_098952238.1|6041383_6043009_-|methyl-accepting-chemotaxis-protein
MNIRSLNIAPRAGLGFGVLALMVFVLGGFALLQMANMRQQSDQVETNWLPSVMAVGEMNQDVLRIRALTLRLLVNRDPQAVAQNEQKIAEIKTDLHHAEGVYEALIVLPEERVLFDRFKVEQQQYLQRQELVVGLSKANRLEEAIAVVNGEMNQMADQMAVTLRELVNLNKSSANEAARLAQQVFSQSRVWVMVMIGITALITIGLAVWLTRSIVLPLAQSLKVAQGVASGDLTGEIRLSGSDEPARLQQALKRMQESLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQNQEIEQAATAVNQMTVAVEEVASNAVATSQASRESDRIAQQGREQVQQTVVSIEALATDVTANVTQVEELAQKVYGISTVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDLAVSSMQQSNTRARSTLDIAKSAGMALEEIASAFTLINERNLVIASASEEQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASQELSRLAVDLNSMVARFSV
>NZ_CP023969.1|WP_098952240.1|6043105_6044128_-|amidohydrolase-family-protein
MFGARLSLALLLAASSLAAQARDYAYSDAHLHYVDFFQETAGMDKLLKAMADNRVKHVMISGIPVAKKWHEDEPKRPRYYAGDDADAYWYSATDVIVAAAVNKLSPAQRQHFHPFLAGFNPNDKNSAAHIQRMLDLNPGLWQGIGEVFTRHDDLTALTSGDTPRANNEAMTRIYHLAAENDLPVMLHSNITSKRERNPLYLAEVEQPLRNHPHTRFIWAHAGTSKEIHRHQVQMDFLLPTLNRLLEAYPNLYIDLSWSMLTPYLLDEAGNPRPEWVKLVERFPDRFMLGSDVVGRFNKLGKEMRRFDTFLDALPEDVAHKVARDNFLAILPKPPRDGDAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023969_10	10.1\|3540355\|55\|NZ_CP023969\|CRISPRCasFinder	3540355-3540409	55	NZ_CP023969.1	5937335-5937389	0	1.0
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	509299-509336	0	1.0
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3426508-3426545	0	1.0
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	927789-927826	0	1.0
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5538141-5538178	0	1.0
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	3367267-3367315	1	0.98
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	5729953-5729984	1	0.969
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	6010383-6010414	1	0.969
NZ_CP023969_5	5.1\|512785\|49\|NZ_CP023969\|CRISPRCasFinder	512785-512833	49	NZ_CP023969.1	583921-583969	1	0.98
NZ_CP023969_7	7.6\|1045164\|48\|NZ_CP023969\|CRT	1045164-1045211	48	NZ_CP023969.1	1045260-1045307	1	0.979
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	1492923-1492960	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	2109293-2109330	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3367262-3367299	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3367335-3367372	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4448578-4448615	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4822310-4822347	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4948797-4948834	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5060723-5060760	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	927716-927753	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3232038-3232075	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4153497-4153534	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4332613-4332650	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4529431-4529468	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5409637-5409674	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5686598-5686635	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6293073-6293110	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6340744-6340781	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6351075-6351112	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6375387-6375424	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6416085-6416122	1	0.974
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6416157-6416194	1	0.974
NZ_CP023969_26	26.1\|6010342\|46\|NZ_CP023969\|CRISPRCasFinder	6010342-6010387	46	NZ_CP023969.1	3951541-3951586	1	0.978
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	1217987-1218035	2	0.959
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	5907663-5907711	2	0.959
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	6351059-6351107	2	0.959
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	3927043-3927091	2	0.959
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	5383296-5383344	2	0.959
NZ_CP023969_1	1.1\|7127\|49\|NZ_CP023969\|CRISPRCasFinder	7127-7175	49	NZ_CP023969.1	5611237-5611285	2	0.959
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	27754-27785	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	28779-28810	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	3367248-3367279	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	4349327-4349358	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	4665376-4665407	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	4697778-4697809	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	4758523-4758554	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	4794667-4794698	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	5320060-5320091	2	0.938
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP023969.1	5419085-5419116	2	0.938
NZ_CP023969_5	5.1\|512785\|49\|NZ_CP023969\|CRISPRCasFinder	512785-512833	49	NZ_CP023969.1	2585934-2585982	2	0.959
NZ_CP023969_9	9.1\|3240622\|48\|NZ_CP023969\|CRISPRCasFinder	3240622-3240669	48	NZ_CP023969.1	194181-194228	2	0.958
NZ_CP023969_20	20.1\|5409679\|40\|NZ_CP023969\|CRISPRCasFinder	5409679-5409718	40	NZ_CP023969.1	4129032-4129071	2	0.95
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	2227829-2227866	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3586351-3586388	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3951456-3951493	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3951528-3951565	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3951600-3951637	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3989379-3989416	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4014417-4014454	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4092715-4092752	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4272126-4272163	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4313277-4313314	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4473739-4473776	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4598342-4598379	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4665390-4665427	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4697792-4697829	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4758537-4758574	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	4758681-4758718	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5313631-5313668	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5523257-5523294	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5611232-5611269	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6066032-6066069	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	28759-28796	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	194183-194220	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	194255-194292	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	357872-357909	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	578056-578093	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	642898-642935	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	1218003-1218040	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	1232991-1233028	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	3351218-3351255	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5147646-5147683	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5419137-5419174	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5594703-5594740	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5748337-5748374	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5828201-5828238	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	5907679-5907716	2	0.947
NZ_CP023969_25	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	NZ_CP023969.1	6087011-6087048	2	0.947
NZ_CP023969_26	26.1\|6010342\|46\|NZ_CP023969\|CRISPRCasFinder	6010342-6010387	46	NZ_CP023969.1	3951469-3951514	2	0.957
NZ_CP023969_26	26.1\|6010342\|46\|NZ_CP023969\|CRISPRCasFinder	6010342-6010387	46	NZ_CP023969.1	3951613-3951658	2	0.957

1. spacer 10.1|3540355|55|NZ_CP023969|CRISPRCasFinder matches to position: 5937335-5937389, mismatch: 0, identity: 1.0

atgctctgtggtaaagagcagggtgaggtcggccttagcagctcgaaattgggtc	CRISPR spacer
atgctctgtggtaaagagcagggtgaggtcggccttagcagctcgaaattgggtc	Protospacer
*******************************************************

2. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 509299-509336, mismatch: 0, identity: 1.0

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgccatcgcaggcaagccagctcc	Protospacer
**************************************

3. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3426508-3426545, mismatch: 0, identity: 1.0

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgccatcgcaggcaagccagctcc	Protospacer
**************************************

4. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 927789-927826, mismatch: 0, identity: 1.0

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgccatcgcaggcaagccagctcc	Protospacer
**************************************

5. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5538141-5538178, mismatch: 0, identity: 1.0

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgccatcgcaggcaagccagctcc	Protospacer
**************************************

6. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 3367267-3367315, mismatch: 1, identity: 0.98

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggcgtcggctggcaggccgtcatcgcaggcaagcca	Protospacer
************************ ************************

7. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 5729953-5729984, mismatch: 1, identity: 0.969

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagtttgatcgt	Protospacer
*********************** ********

8. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 6010383-6010414, mismatch: 1, identity: 0.969

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagtttgatcgt	Protospacer
*********************** ********

9. spacer 5.1|512785|49|NZ_CP023969|CRISPRCasFinder matches to position: 583921-583969, mismatch: 1, identity: 0.98

tttggatggtggtgtgtcaggtagatcagtgtcggctgtcaggccgcca	CRISPR spacer
tttggatggtgctgtgtcaggtagatcagtgtcggctgtcaggccgcca	Protospacer
*********** *************************************

10. spacer 7.6|1045164|48|NZ_CP023969|CRT matches to position: 1045260-1045307, mismatch: 1, identity: 0.979

ggcactggtggcggcactggcggcggcaccggtggtggcactggtggc	CRISPR spacer
ggcactggtggcggcaccggcggcggcaccggtggtggcactggtggc	Protospacer
*****************.******************************

11. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 1492923-1492960, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

12. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 2109293-2109330, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgctatcgcaggcaagccagctcc	Protospacer
*****************.********************

13. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3367262-3367299, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

14. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3367335-3367372, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

15. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4448578-4448615, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgccaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

16. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4822310-4822347, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggtaggccgccatcgcaggcaagccagctcc	Protospacer
*********.****************************

17. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4948797-4948834, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

18. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5060723-5060760, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

19. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 927716-927753, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

20. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3232038-3232075, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgccaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

21. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4153497-4153534, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

22. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4332613-4332650, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgccatcgcaggcaagccagctcc	Protospacer
********* ****************************

23. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4529431-4529468, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

24. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5409637-5409674, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgccatcgcaggcaagccagctcc	Protospacer
********* ****************************

25. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5686598-5686635, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

26. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6293073-6293110, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

27. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6340744-6340781, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcgggccgccatcgcaggcaagccagctcc	Protospacer
**********.***************************

28. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6351075-6351112, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
******** *****************************

29. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6375387-6375424, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgccatcgcaggcaagccagctcc	Protospacer
********* ****************************

30. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6416085-6416122, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgccatcgcaggcaagccagctcc	Protospacer
********* ****************************

31. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6416157-6416194, mismatch: 1, identity: 0.974

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****************.*********************

32. spacer 26.1|6010342|46|NZ_CP023969|CRISPRCasFinder matches to position: 3951541-3951586, mismatch: 1, identity: 0.978

cggggtgtcagagagataggcgtcggctggcaggccgtcatcgcag	CRISPR spacer
cggggtgtcagagagataggcgtcggctggcagaccgtcatcgcag	Protospacer
*********************************.************

33. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 1217987-1218035, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggcgtcggctgtcaggctgccatcgcaggcaagcca	Protospacer
******************************.*.****************

34. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 5907663-5907711, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagagaagcgtcggctgtcaggccgtcatcgcaggcaagcca	Protospacer
*********** *.***********************************

35. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 6351059-6351107, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggtgtcggctgtcaggccgccatcgcaggcaagcca	Protospacer
***************.****************.****************

36. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 3927043-3927091, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggtgtcggctttcaggccgtcatcgcaggcaagcca	Protospacer
***************.******* *************************

37. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 5383296-5383344, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggcgccggctggcaggccgtcatcgcaggcaagcca	Protospacer
*****************.****** ************************

38. spacer 1.1|7127|49|NZ_CP023969|CRISPRCasFinder matches to position: 5611237-5611285, mismatch: 2, identity: 0.959

tgtcaggtagataggcgtcggctgtcaggccgtcatcgcaggcaagcca	CRISPR spacer
tgtcaggtagataggcgtcgcctgtcaggccgccatcgcaggcaagcca	Protospacer
******************** ***********.****************

39. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 27754-27785, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

40. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 28779-28810, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

41. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 3367248-3367279, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

42. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 4349327-4349358, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

43. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 4665376-4665407, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

44. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 4697778-4697809, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

45. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 4758523-4758554, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacaggttcagcgt	Protospacer
************************** * ***

46. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 4794667-4794698, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

47. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 5320060-5320091, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

48. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to position: 5419085-5419116, mismatch: 2, identity: 0.938

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcaggcaagccagctcccacagttggatcgt	Protospacer
*********************** * ******

49. spacer 5.1|512785|49|NZ_CP023969|CRISPRCasFinder matches to position: 2585934-2585982, mismatch: 2, identity: 0.959

tttggatggtggtgtgtcaggtagatcagtgtcggctgtcaggccgcca	CRISPR spacer
tttggatggtggtgtgtcaggtagatcagcgtcggctgtcaggccgtca	Protospacer
*****************************.****************.**

50. spacer 9.1|3240622|48|NZ_CP023969|CRISPRCasFinder matches to position: 194181-194228, mismatch: 2, identity: 0.958

caactgtgggagctggcttgcctgcgatgacggcctgccagccgacat	CRISPR spacer
caaatgtgggagctggcttgcctgcgatgacggcctcccagccgacat	Protospacer
*** ******************************** ***********

51. spacer 20.1|5409679|40|NZ_CP023969|CRISPRCasFinder matches to position: 4129032-4129071, mismatch: 2, identity: 0.95

tttggactgcggcgcgtcagctagatcagcgtcggctgtc	CRISPR spacer
tttggactgcggcgcgtcaggtagataagcgtcggctgtc	Protospacer
******************** ***** *************

52. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 2227829-2227866, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcgcctggcaggccgtcatcgcaggcaagccagctcc	Protospacer
**** ***********.*********************

53. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3586351-3586388, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgtcttcgcaggcaagccagctcc	Protospacer
****************.* *******************

54. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3951456-3951493, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgccaggccgtcatcgcaggcaagccagctcc	Protospacer
******** *******.*********************

55. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3951528-3951565, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcagaccgtcatcgcaggcaagccagctcc	Protospacer
************.***.*********************

56. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3951600-3951637, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgccaggccgtcatcgcaggcaagccagctcc	Protospacer
******** *******.*********************

57. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3989379-3989416, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgacaggccgctatcgcaggcaagccagctcc	Protospacer
********.********.********************

58. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4014417-4014454, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccgttatcgcaggcaagccagctcc	Protospacer
****************..********************

59. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4092715-4092752, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggtaggccgtcatcgcaggcaagccagctcc	Protospacer
*********.******.*********************

60. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4272126-4272163, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccttcgcaggcaagccagctcc	Protospacer
******** ********* *******************

61. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4313277-4313314, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgaaaggccgccatcgcaggcaagccagctcc	Protospacer
********. ****************************

62. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4473739-4473776, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgttaggccgccatcgcaggcaagccagctcc	Protospacer
******** .****************************

63. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4598342-4598379, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcgactggtaggccgccatcgcaggcaagccagctcc	Protospacer
****.****.****************************

64. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4665390-4665427, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcgactggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****.***********.*********************

65. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4697792-4697829, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

66. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4758537-4758574, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctagcaggccggcatcgcaggcaagccagctcc	Protospacer
*******.******** *********************

67. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 4758681-4758718, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

68. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5313631-5313668, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggtaggccgtcatcgcaggcaagccagctcc	Protospacer
*********.******.*********************

69. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5523257-5523294, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

70. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5611232-5611269, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcgcctgtcaggccgccatcgcaggcaagccagctcc	Protospacer
**** *** *****************************

71. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6066032-6066069, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggtcgctatcgcaggcaagccagctcc	Protospacer
*************.***.********************

72. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 28759-28796, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

73. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 194183-194220, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

74. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 194255-194292, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gttggctggcgggccgccatcgcaggcaagccagctcc	Protospacer
**.*******.***************************

75. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 357872-357909, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgggaggccgtcatcgcaggcaagccagctcc	Protospacer
********* ******.*********************

76. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 578056-578093, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgccaggccgtcatcgcaggcaagccagctcc	Protospacer
******** *******.*********************

77. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 642898-642935, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggatggcaggccgtcatcgcaggcaagccagctcc	Protospacer
***** **********.*********************

78. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 1218003-1218040, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggctgccatcgcaggcaagccagctcc	Protospacer
******** *****.***********************

79. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 1232991-1233028, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgctatcgcaggcaagccagctcc	Protospacer
******** ********.********************

80. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 3351218-3351255, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccttcgcaggcaagccagctcc	Protospacer
******** ********* *******************

81. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5147646-5147683, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcagggcgtcatcgcaggcaagccagctcc	Protospacer
************* **.*********************

82. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5419137-5419174, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggcaggccatcatcgcaggcaagccagctcc	Protospacer
***************..*********************

83. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5594703-5594740, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtaggctgggaggccgccatcgcaggcaagccagctcc	Protospacer
** ****** ****************************

84. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5748337-5748374, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggtaggccgtcatcgcaggcaagccagctcc	Protospacer
*********.******.*********************

85. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5828201-5828238, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctggggggccgccatcgcaggcaagccagctcc	Protospacer
********* .***************************

86. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 5907679-5907716, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgtcatcgcaggcaagccagctcc	Protospacer
******** *******.*********************

87. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to position: 6087011-6087048, mismatch: 2, identity: 0.947

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcgactggcaggccgtcatcgcaggcaagccagctcc	Protospacer
****.***********.*********************

88. spacer 26.1|6010342|46|NZ_CP023969|CRISPRCasFinder matches to position: 3951469-3951514, mismatch: 2, identity: 0.957

cggggtgtcagagagataggcgtcggctggcaggccgtcatcgcag	CRISPR spacer
cggggcgtcagagagataggcgtcggctgccaggccgtcatcgcag	Protospacer
*****.*********************** ****************

89. spacer 26.1|6010342|46|NZ_CP023969|CRISPRCasFinder matches to position: 3951613-3951658, mismatch: 2, identity: 0.957

cggggtgtcagagagataggcgtcggctggcaggccgtcatcgcag	CRISPR spacer
cggggcgtcagagagataggcgtcggctgccaggccgtcatcgcag	Protospacer
*****.*********************** ****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP045223	Achromobacter xylosoxidans strain DN002 plasmid unnamed	244284-244307	1	0.958
NZ_CP023969_7	7.4\|1045062\|21\|NZ_CP023969\|CRT	1045062-1045082	21	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	257236-257256	2	0.905
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	570089-570112	2	0.917
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MF766046	Streptomyces phage Diane, complete genome	18708-18731	2	0.917
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP032196	Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence	94889-94912	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MG869617	Polaromonas sp. E3S plasmid pE3SP1, complete sequence	29746-29769	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP021045	Phaeobacter gallaeciensis strain P129 plasmid pP129_e, complete sequence	51004-51027	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	320627-320650	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP027615	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence	100570-100593	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	167980-168003	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	1017211-1017234	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	NZ_CP035707	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt13, complete sequence	18710-18733	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MN693933	Marine virus AFVG_250M271, complete genome	17996-18019	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MN693258	Marine virus AFVG_25M459, complete genome	19842-19865	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MN693258	Marine virus AFVG_25M459, complete genome	19881-19904	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MN693258	Marine virus AFVG_25M459, complete genome	19893-19916	3	0.875
NZ_CP023969_7	7.7\|1045236\|24\|NZ_CP023969\|CRT	1045236-1045259	24	MN694544	Marine virus AFVG_250M272, complete genome	17988-18011	3	0.875
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	173231-173262	5	0.844
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	187557-187588	6	0.812
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	5972-6004	6	0.818
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	MN693933	Marine virus AFVG_250M271, complete genome	17987-18019	6	0.818
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	MN694544	Marine virus AFVG_250M272, complete genome	17979-18011	6	0.818
NZ_CP023969_2	2.1\|212042\|32\|NZ_CP023969\|CRISPRCasFinder	212042-212073	32	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	172181-172212	7	0.781
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NC_002806	Microscilla sp. PRE1 plasmid pSD15, complete sequence	25534-25566	7	0.788
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	65153-65185	7	0.788
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP032196	Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence	94889-94921	7	0.788
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP027615	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence	100570-100602	7	0.788
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	167971-168003	7	0.788
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MN693360	Marine virus AFVG_25M250, complete genome	29701-29733	8	0.758
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MT939492	Xanthomonas phage Xoo-sp14, complete genome	88865-88897	8	0.758
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	MN693258	Marine virus AFVG_25M459, complete genome	19842-19874	8	0.758
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP032196	Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence	94877-94909	8	0.758
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP027615	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence	100558-100590	8	0.758
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP010326	Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence	327401-327433	8	0.758
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	570089-570121	8	0.758
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2135089-2135121	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MF403008	Agrobacterium phage Atu_ph07, complete genome	82559-82591	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MT897910	Mycobacterium phage VioletZ, complete genome	33554-33586	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MN369759	Mycobacterium phage Mithril, complete genome	33496-33528	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MN428050	Mycobacterium phage Apex, complete genome	33661-33693	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MN234171	Mycobacterium phage Magpie, complete genome	33324-33356	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	KX589269	Mycobacterium phage Fortunato, complete genome	33480-33512	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MT639648	Mycobacterium phage Heath, complete genome	33082-33114	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NC_042035	Mycobacterium phage Zemanar, complete sequence	33484-33516	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	MN850581	Escherichia phage sortkaff, complete genome	2362-2394	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NC_022331	Mycobacterium phage Bane1, complete genome	33157-33189	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	KF279413	Mycobacterium phage Bane2, complete genome	33136-33168	9	0.727
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP010622	Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_e, complete sequence	66783-66815	9	0.727
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP010732	Phaeobacter inhibens strain P88 plasmid pP88_g, complete sequence	68436-68468	9	0.727
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP010748	Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_c, complete sequence	66782-66814	9	0.727
NZ_CP023969_7	7.5\|1045107\|33\|NZ_CP023969\|CRT	1045107-1045139	33	NZ_CP010739	Phaeobacter inhibens strain P72 plasmid pP72_d, complete sequence	66947-66979	9	0.727
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1114974-1115006	10	0.697
NZ_CP023969_7	7.3\|1045005\|33\|NZ_CP023969\|CRT	1045005-1045037	33	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	82204-82236	10	0.697

1. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 1, identity: 0.958

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcggtggcaccggcggc	Protospacer
*****************.******

2. spacer 7.4|1045062|21|NZ_CP023969|CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 2, identity: 0.905

accggtggcggtaccggtggc	CRISPR spacer
ggcggtggcggtaccggtggc	Protospacer
. *******************

3. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.917

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcgcgggcactggcggc	Protospacer
**********  ************

4. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MF766046 (Streptomyces phage Diane, complete genome) position: , mismatch: 2, identity: 0.917

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcggtggcgctggcgcc	Protospacer
***************.****** *

5. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP032196 (Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggctctggcggtggctctggcggt	Protospacer
*** *********** *******.

6. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MG869617 (Polaromonas sp. E3S plasmid pE3SP1, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
cgccctggcggtggcacgggcggc	Protospacer
 ** ************* ******

7. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP021045 (Phaeobacter gallaeciensis strain P129 plasmid pP129_e, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcggtcgcactgacgga	Protospacer
************ ******.***

8. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcgctggcactgtcgga	Protospacer
********** ******** ***

9. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP027615 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggctctggcggtggctctggcggt	Protospacer
*** *********** *******.

10. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcattggcgatggcactggcggt	Protospacer
****.*****.************.

11. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcaatggcggtggcaatggcggt	Protospacer
**** *********** ******.

12. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to NZ_CP035707 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt13, complete sequence) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcactggcactggcggg	Protospacer
*********. ************

13. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MN693933 (Marine virus AFVG_250M271, complete genome) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcggtggcggtggcggt	Protospacer
***************. ******.

14. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggtactggcggcggcactggcggg	Protospacer
**.********.***********

15. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggtggaggcactggcggt	Protospacer
********.** ***********.

16. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggtggtggcactggtgga	Protospacer
********.***********.**

17. spacer 7.7|1045236|24|NZ_CP023969|CRT matches to MN694544 (Marine virus AFVG_250M272, complete genome) position: , mismatch: 3, identity: 0.875

ggcactggcggtggcactggcggc	CRISPR spacer
ggcactggcggtggcggtggcggt	Protospacer
***************. ******.

18. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

cgcaggcaagccagctcccacaggttgatcgt--	CRISPR spacer
cgcgggcaagcccgctcccacagg--gatcttca	Protospacer
***.******** ***********  **** *

19. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcgggcaagcccgctcccacaggattcgcgt	Protospacer
***.******** *********** *   ***

20. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.818

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
gctggctgtggcactggctgtggcactggtctt	Protospacer
.***** *********** **********.  *

21. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to MN693933 (Marine virus AFVG_250M271, complete genome) position: , mismatch: 6, identity: 0.818

---actggcggtggcactggcggtggcactggcggt	CRISPR spacer
ggaactgac---ggcactggcggtggcggtggcggt	Protospacer
   ****.*   ***************. *******

22. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to MN694544 (Marine virus AFVG_250M272, complete genome) position: , mismatch: 6, identity: 0.818

---actggcggtggcactggcggtggcactggcggt	CRISPR spacer
ggaactgac---ggcactggcggtggcggtggcggt	Protospacer
   ****.*   ***************. *******

23. spacer 2.1|212042|32|NZ_CP023969|CRISPRCasFinder matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgcaggcaagccagctcccacaggttgatcgt	CRISPR spacer
cgcgggcaagcccgctcccacagtggggttgt	Protospacer
***.******** **********   *.*.**

24. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NC_002806 (Microscilla sp. PRE1 plasmid pSD15, complete sequence) position: , mismatch: 7, identity: 0.788

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtggtggcggtaatggtggcggtaccttgggc	Protospacer
. *********.* *************   ***

25. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.788

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
actggtggcggcatgggtggcggtggcgcggga	Protospacer
*************. *********. **  **

26. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP032196 (Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
cgagtaggtggctctggcggtggctctggcggt	Protospacer
   *  ****** *********** ********

27. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP027615 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
cgagtaggtggctctggcggtggctctggcggt	Protospacer
   *  ****** *********** ********

28. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
gccggggccggcattggcgatggcactggcggt	Protospacer
.*.** * .****.*****.*************

29. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MN693360 (Marine virus AFVG_25M250, complete genome) position: , mismatch: 8, identity: 0.758

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggctttggcggcactggtggcggtggcggcggt	Protospacer
. .  *******************. ******.

30. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MT939492 (Xanthomonas phage Xoo-sp14, complete genome) position: , mismatch: 8, identity: 0.758

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggcaacggcggcaccggtggcggcaccggcggc	Protospacer
. ....********.********.*********

31. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 8, identity: 0.758

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
ggcgaaggtggtactggcggcggcactggcggg	Protospacer
. .*. *****.********.***********

32. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP032196 (Klebsiella pneumoniae strain AR_0097 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tctggcggtggctctggcggtagcagaggtaat	Protospacer
 *********** ********.***  **...*

33. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP027615 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tctggcggtggctctggcggtagcagaggtaat	Protospacer
 *********** ********.***  **...*

34. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP010326 (Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence) position: , mismatch: 8, identity: 0.758

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tcaggcggtggcacaggcggtggcgctgctgag	Protospacer
 * *********** *********.*** .*.

35. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.758

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
gcagcgcgtggcactggcgcgggcactggcggc	Protospacer
.* *   ************  ***********.

36. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
gtcgatccgggcacgggtggcggcaccggcggc	Protospacer
...*.*   ***** ********.*********

37. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
tctggaggcggcactggtagcggtactgttaat	Protospacer
 **** ************.*******.* ....

38. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MT897910 (Mycobacterium phage VioletZ, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

39. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MN369759 (Mycobacterium phage Mithril, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

40. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MN428050 (Mycobacterium phage Apex, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

41. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MN234171 (Mycobacterium phage Magpie, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

42. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to KX589269 (Mycobacterium phage Fortunato, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

43. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MT639648 (Mycobacterium phage Heath, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctt	Protospacer
. * *.******  ****************  .

44. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NC_042035 (Mycobacterium phage Zemanar, complete sequence) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

45. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to MN850581 (Escherichia phage sortkaff, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
actggcggcggcgctggtggcggtgattgtcgt	Protospacer
*****.******.***********. . *. *.

46. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NC_022331 (Mycobacterium phage Bane1, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

47. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to KF279413 (Mycobacterium phage Bane2, complete genome) position: , mismatch: 9, identity: 0.727

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
ggtcgcggcggctgtggtggcggtaccggcctg	Protospacer
. * *.******  ****************

48. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP010622 (Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_e, complete sequence) position: , mismatch: 9, identity: 0.727

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tccttctgtggcactggctgcggcactggcgtc	Protospacer
 *.  * *********** *.********** .

49. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP010732 (Phaeobacter inhibens strain P88 plasmid pP88_g, complete sequence) position: , mismatch: 9, identity: 0.727

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tccttctgtggcactggctgcggcactggcgtc	Protospacer
 *.  * *********** *.********** .

50. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP010748 (Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_c, complete sequence) position: , mismatch: 9, identity: 0.727

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tccttctgtggcactggctgcggcactggcgtc	Protospacer
 *.  * *********** *.********** .

51. spacer 7.5|1045107|33|NZ_CP023969|CRT matches to NZ_CP010739 (Phaeobacter inhibens strain P72 plasmid pP72_d, complete sequence) position: , mismatch: 9, identity: 0.727

actggcggtggcactggcggtggcactggcggt	CRISPR spacer
tccttctgtggcactggctgcggcactggcgtc	Protospacer
 *.  * *********** *.********** .

52. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 10, identity: 0.697

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
cgccgcggcggcactggcggcggtgccggcctt	Protospacer
  . *.***********.******.*****  .

53. spacer 7.3|1045005|33|NZ_CP023969|CRT matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 10, identity: 0.697

actggtggcggcactggtggcggtaccggcggc	CRISPR spacer
gtaacttgcggcactggtgtcggttccggcgct	Protospacer
.. . * ************ **** ****** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18049 : 23080

uncultured_Mediterranean_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003189215.1\|18049_18616_-	dCTP deaminase	S5VM63	Pseudomonas_phage	3.7e-74	73.3
WP_002554837.1\|19004_19214_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_032893168.1\|19494_20502_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
WP_032893170.1\|20608_21445_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
WP_169850588.1\|21653_22289_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	7.8e-41	52.3
WP_003189210.1\|22330_23080_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	7.2e-62	49.4

DBSCAN-SWA_2

215707 : 329578

132

uncultured_Caudovirales_phage(41.03%)

terminase,lysis,portal,capsid,protease,holin,plate,tail,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032893224.1\|215707_216394_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_032893225.1\|216484_217132_-	adenylate kinase	A0A2K9L833	Tupanvirus	1.9e-10	32.5
WP_098949372.1\|217412_220058_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_032893227.1\|220255_220600_+	hypothetical protein	NA	NA	NA	NA
WP_003189094.1\|220883_221309_+	DUF4398 domain-containing protein	NA	NA	NA	NA
WP_003189093.1\|221365_222151_+	OmpA family protein	NA	NA	NA	NA
WP_138183483.1\|222226_222604_-	hypothetical protein	NA	NA	NA	NA
WP_098949374.1\|222795_223038_+	hypothetical protein	NA	NA	NA	NA
WP_003189087.1\|224046_224373_-	hypothetical protein	NA	NA	NA	NA
WP_098949375.1\|224369_225275_-	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	2.7e-10	28.6
WP_014717201.1\|225428_226706_-	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA
WP_078467916.1\|226758_227475_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003189082.1\|227581_229084_-\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	5.5e-85	39.4
WP_098949376.1\|229164_230260_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.0e-07	46.6
WP_014717198.1\|230549_231551_-	PleD family two-component system response regulator	A0A127AWB9	Bacillus_phage	1.6e-16	35.2
WP_098949377.1\|231603_232614_-	chemotaxis response regulator protein-glutamate methylesterase	Q6XM27	Feldmannia_irregularis_virus	1.3e-05	40.3
WP_098949378.1\|232610_234890_-	hybrid sensor histidine kinase/response regulator	Q56AR1	Bacillus_thuringiensis_phage	9.7e-09	27.4
WP_044272240.1\|234886_235588_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_098949379.1\|235584_236847_-	chemotaxis protein CheR	NA	NA	NA	NA
WP_098949380.1\|236843_237356_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_044272237.1\|237355_238978_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_056790152.1\|239756_240464_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_056790149.1\|240768_242394_+	glucan biosynthesis protein D	NA	NA	NA	NA
WP_003189066.1\|242448_242634_-	hypothetical protein	NA	NA	NA	NA
WP_032893241.1\|242937_244044_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_032893242.1\|244256_246158_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.1e-74	33.6
WP_098949382.1\|246571_246895_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	5.4e-14	38.3
WP_032893244.1\|246891_247227_+	putative addiction module antidote protein	NA	NA	NA	NA
WP_169855583.1\|247422_248751_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_032893246.1\|248851_249322_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003189059.1\|250064_250775_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_005785469.1\|250843_251305_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.6e-38	52.0
WP_044272215.1\|251308_252004_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_003189055.1\|252186_252966_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_003189054.1\|253091_254018_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019817716.1\|254021_254384_-	diacylglycerol kinase	NA	NA	NA	NA
WP_098949383.1\|254459_255110_-	response regulator transcription factor	NA	NA	NA	NA
WP_098949384.1\|255361_256081_-	DTW domain-containing protein	NA	NA	NA	NA
WP_003189047.1\|256259_256694_+	hypothetical protein	NA	NA	NA	NA
WP_098949385.1\|256988_258101_+	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_003189043.1\|258163_258631_-	recombination regulator RecX	NA	NA	NA	NA
WP_003189042.1\|258639_259698_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.4e-111	62.4
WP_020301157.1\|259781_260282_-	CinA family protein	B5TK85	Pseudomonas_phage	1.8e-69	82.5
WP_078802606.1\|260363_260858_-\|lysis	lysis protein	A0A2H4IZW4	uncultured_Caudovirales_phage	8.5e-35	53.7
WP_098949386.1\|260845_261397_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.6e-74	74.0
WP_078802604.1\|261393_261585_-	hypothetical protein	NA	NA	NA	NA
WP_098949387.1\|261577_261931_-	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	1.2e-11	42.6
WP_078802602.1\|261927_263022_-	hypothetical protein	A0A1B0VMK1	Pseudomonas_phage	1.1e-10	33.3
WP_078802601.1\|263090_263303_-	hypothetical protein	A0A1B0VMJ7	Pseudomonas_phage	6.6e-13	55.4
WP_098949388.1\|263295_263652_-	hypothetical protein	A0A0U3DIY4	Pseudomonas_phage	9.5e-12	41.0
WP_098949389.1\|263648_264644_-	hypothetical protein	A0A1B0VMK1	Pseudomonas_phage	2.7e-16	28.0
WP_138183484.1\|264710_265421_-	hypothetical protein	NA	NA	NA	NA
WP_138183485.1\|265420_265690_-	hypothetical protein	NA	NA	NA	NA
WP_098949390.1\|265718_269543_-	DUF1983 domain-containing protein	Q6JIL2	Burkholderia_virus	1.2e-285	47.5
WP_098952561.1\|269602_270214_-\|tail	tail assembly protein	C7BGD3	Burkholderia_phage	2.4e-47	51.3
WP_098949391.1\|270258_270888_-\|tail	tail assembly protein	A0A2I6PI69	Pseudomonas_phage	5.9e-49	52.2
WP_098949392.1\|270921_271695_-\|tail	phage tail protein	A0A2I6PI52	Pseudomonas_phage	1.0e-82	54.5
WP_032893275.1\|271697_272381_-\|tail	phage minor tail protein L	A0A2I6PIA7	Pseudomonas_phage	2.8e-84	64.3
WP_032893276.1\|272432_272771_-\|tail	phage tail protein	K7PHJ6	Enterobacteria_phage	3.9e-31	56.2
WP_098949393.1\|272799_273960_-\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	9.6e-21	29.1
WP_169878803.1\|274022_274229_-	hypothetical protein	NA	NA	NA	NA
WP_032893278.1\|274306_274657_-\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_032893279.1\|274665_275157_-\|tail	phage major tail protein	H2BDC0	Pseudomonas_virus	5.1e-48	61.6
WP_032893280.1\|275249_275441_-	hypothetical protein	NA	NA	NA	NA
WP_032893281.1\|275492_276503_-\|tail	phage-like tail protein	A0A2H4JH05	uncultured_Caudovirales_phage	1.7e-98	55.3
WP_032893283.1\|276512_276725_-\|tail	tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	3.1e-18	61.4
WP_032893284.1\|276717_277101_-\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	2.3e-35	57.5
WP_098949394.1\|277100_278930_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_098949395.1\|279057_279630_-\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	1.8e-28	38.8
WP_098949396.1\|279811_280318_-\|tail	phage major tail tube protein	Q6R4W3	Vibrio_virus	1.0e-22	34.5
WP_032877508.1\|280317_281484_-\|tail	tail protein	B0ZSG8	Halomonas_phage	7.2e-125	57.0
WP_003189022.1\|281486_281660_-	hypothetical protein	NA	NA	NA	NA
WP_098949397.1\|281747_282050_-	hypothetical protein	Q8H9M8	Vibrio_phage	6.4e-09	43.2
WP_169918534.1\|282061_282844_-\|tail	phage tail protein	NA	NA	NA	NA
WP_073453118.1\|282891_283422_-\|tail	phage tail protein	B0ZSG1	Halomonas_phage	3.8e-49	57.5
WP_056790108.1\|283418_284057_-\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	2.8e-38	51.9
WP_098949399.1\|284053_285049_-\|plate	baseplate J/gp47 family protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.1e-113	64.7
WP_032893295.1\|285045_285378_-\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	5.1e-36	67.3
WP_032893296.1\|285387_285999_-\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	1.9e-44	53.3
WP_032893297.1\|286002_286518_-	hypothetical protein	NA	NA	NA	NA
WP_003189007.1\|286541_286880_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	1.4e-44	85.4
WP_169855582.1\|287470_288214_-	helix-turn-helix domain-containing protein	B5TK58	Pseudomonas_phage	3.4e-120	87.9
WP_003189004.1\|288438_288927_+	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	3.8e-27	44.5
WP_032893301.1\|288919_289291_+	hypothetical protein	NA	NA	NA	NA
WP_032893302.1\|289575_290124_-	hypothetical protein	NA	NA	NA	NA
WP_032893303.1\|290537_290819_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_098949400.1\|291816_292797_+	ATP-binding protein	NA	NA	NA	NA
WP_098949401.1\|292896_293211_+	STAS-like domain-containing protein	NA	NA	NA	NA
WP_098949402.1\|293414_294692_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.0e-108	50.0
WP_098949403.1\|294684_295110_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.1e-14	37.8
WP_098949404.1\|295210_295960_+	SOS response-associated peptidase family protein	A0A2H4J991	uncultured_Caudovirales_phage	8.9e-60	52.8
WP_098949405.1\|296151_296946_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	8.4e-101	66.2
WP_098949406.1\|297095_297638_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	6.9e-46	58.6
WP_098949407.1\|297619_298183_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	3.0e-84	81.2
WP_056783387.1\|298231_299278_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.4e-148	75.9
WP_098949408.1\|299371_299578_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	5.8e-22	70.1
WP_098949409.1\|299552_300398_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.9e-111	69.6
WP_098949410.1\|300407_303518_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.5e-92	37.6
WP_098949411.1\|303668_304268_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	3.3e-17	50.0
WP_098949412.1\|304282_304786_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	7.5e-63	71.3
WP_098949413.1\|304798_305965_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	1.8e-168	77.4
WP_138183486.1\|306067_306517_-\|tail	phage tail protein	NA	NA	NA	NA
WP_098949414.1\|306513_308103_-\|tail	phage tail protein	A4PE45	Ralstonia_virus	4.6e-66	50.8
WP_098949415.1\|308099_308789_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	1.6e-68	69.1
WP_098949416.1\|308790_309672_-\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	6.9e-104	67.1
WP_098949417.1\|309668_309995_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.2e-34	67.0
WP_098949418.1\|310000_310270_-	hypothetical protein	A0A2H4J885	uncultured_Caudovirales_phage	1.0e-10	60.0
WP_056783628.1\|310327_310861_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.1e-51	73.8
WP_098949419.1\|310890_311406_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	7.7e-63	67.3
WP_098949420.1\|311405_312065_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	4.0e-80	69.9
WP_098949421.1\|312061_312382_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	4.8e-39	70.5
WP_098949422.1\|312384_313380_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	2.4e-169	87.6
WP_056783424.1\|313443_313782_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	8.3e-42	81.7
WP_098949423.1\|313778_314921_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	1.1e-138	69.3
WP_098949424.1\|314917_316399_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	2.8e-243	84.6
WP_059397074.1\|316398_316605_-	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	1.2e-22	76.5
WP_073521655.1\|316606_318607_-\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	82.9
WP_098949425.1\|318610_319216_-\|terminase	terminase small subunit	A0A2H4JG15	uncultured_Caudovirales_phage	2.9e-61	67.7
WP_043046669.1\|319421_319766_-\|holin	pyocin R2, holin	A0A2H4J893	uncultured_Caudovirales_phage	2.2e-45	79.6
WP_098949426.1\|319858_320221_+	hypothetical protein	NA	NA	NA	NA
WP_098949427.1\|320759_321125_-	hypothetical protein	NA	NA	NA	NA
WP_098949428.1\|321117_323334_-	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	1.5e-192	47.9
WP_098949429.1\|323323_323551_-	TraR/DksA family transcriptional regulator	A0A2I7S9S9	Vibrio_phage	5.8e-07	49.1
WP_034127794.1\|323543_324062_-	hypothetical protein	NA	NA	NA	NA
WP_098949430.1\|324390_324651_-	hypothetical protein	A0A0D4DBS7	Acinetobacter_phage	3.2e-09	44.7
WP_098949431.1\|324729_325455_+	peptidase S24	A8CGC0	Salmonella_phage	4.9e-31	40.6
WP_098949432.1\|325483_326869_-	NTPase	R9TRQ8	Vibrio_phage	1.6e-30	29.2
WP_098949433.1\|327233_327815_+	hypothetical protein	NA	NA	NA	NA
WP_098949434.1\|327824_328109_+	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_065929207.1\|328264_328591_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_098949436.1\|328640_329039_+	hypothetical protein	NA	NA	NA	NA
WP_098949437.1\|329035_329578_+	phosphohydrolase	A0A2D1GNL9	Pseudomonas_phage	1.2e-26	41.9

DBSCAN-SWA_3

795725 : 808339

uncultured_Caudovirales_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008437341.1\|795725_797630_+	type I DNA topoisomerase	A0A1S5V180	Saudi_moumouvirus	1.0e-64	29.8
WP_019818088.1\|797740_799621_+	hypothetical protein	NA	NA	NA	NA
WP_024073377.1\|799617_801573_+	DEAD/DEAH box helicase	A0A1B3B0M9	Gordonia_phage	1.1e-24	25.8
WP_008437347.1\|801828_802377_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	2.6e-45	53.4
WP_008437348.1\|802396_803131_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.2e-104	79.4
WP_008437349.1\|803130_803601_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	4.7e-51	60.9
WP_008437350.1\|803610_804900_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.2e-175	73.2
WP_008437351.1\|804922_805273_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.1e-32	57.5
WP_098949600.1\|806163_807033_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_098949601.1\|807022_808339_+	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	H6UK37	Aeromonas_phage	2.2e-05	58.3

DBSCAN-SWA_4

2381647 : 2428179

Catovirus(20.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069557084.1\|2381647_2383342_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	2.9e-50	29.7
WP_098950159.1\|2383513_2384986_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_044271839.1\|2385096_2385690_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_098950160.1\|2386023_2388015_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	26.4
WP_032894931.1\|2388181_2389360_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.0e-25	37.1
WP_098950161.1\|2389356_2390202_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_034128893.1\|2390271_2391219_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014720257.1\|2391636_2393013_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_003194907.1\|2393540_2394644_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_032894934.1\|2394771_2395035_-	hypothetical protein	NA	NA	NA	NA
WP_138183515.1\|2395230_2395752_-	thioesterase family protein	NA	NA	NA	NA
WP_032894937.1\|2395871_2396837_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_056782933.1\|2396979_2397867_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_032894940.1\|2397940_2398885_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032894941.1\|2399080_2400025_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_047711954.1\|2400265_2400694_+	hypothetical protein	NA	NA	NA	NA
WP_098950162.1\|2400701_2401118_-	DUF3010 family protein	NA	NA	NA	NA
WP_044271826.1\|2401158_2401560_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_014720245.1\|2401778_2402756_+	dipeptidase	NA	NA	NA	NA
WP_005792152.1\|2402834_2403365_+	hypothetical protein	NA	NA	NA	NA
WP_032894946.1\|2403380_2405441_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_098950163.1\|2405578_2407522_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_098950164.1\|2407521_2408742_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_164545343.1\|2408746_2409523_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_032894948.1\|2410269_2411565_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_014720237.1\|2411847_2412948_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_032894949.1\|2413414_2413615_-	hypothetical protein	NA	NA	NA	NA
WP_032894950.1\|2413808_2414849_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_098950165.1\|2414939_2415668_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_003194857.1\|2415928_2417182_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.3e-100	52.7
WP_003176546.1\|2417204_2418455_+	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_003194855.1\|2418470_2418773_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_032894955.1\|2418769_2421787_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_032894956.1\|2421923_2422556_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_032894958.1\|2422605_2423463_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_014720230.1\|2423647_2424847_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.1e-11	29.7
WP_098950166.1\|2424891_2425257_-	hypothetical protein	NA	NA	NA	NA
WP_032894959.1\|2425455_2425914_-	anti-sigma factor	NA	NA	NA	NA
WP_098950167.1\|2426050_2426623_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_032894964.1\|2426619_2427507_-	acyltransferase	NA	NA	NA	NA
WP_098950168.1\|2427678_2428179_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_5

4186942 : 4273710

uncultured_Caudovirales_phage(40.54%)

tRNA,lysis,integrase,tail,transposase,terminase

attL 4194350:4194398|attR 4228883:4228931

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003192490.1\|4186942_4188865_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.4e-125	37.7
WP_015884933.1\|4188864_4189416_+	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	2.1e-13	36.7
WP_002553160.1\|4189475_4189670_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_003192488.1\|4189699_4190056_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_003192486.1\|4190165_4191182_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-28	39.3
WP_098950859.1\|4191208_4193587_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_002553164.1\|4193590_4193893_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9
WP_003174972.1\|4193873_4194230_+	MerR family transcriptional regulator	NA	NA	NA	NA
4194350:4194398	attL	NA	NA	NA	NA
WP_034117609.1\|4194486_4195599_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	A0A0U4JIT5	Pseudomonas_phage	2.1e-33	31.5
WP_034117610.1\|4195598_4195811_-	hypothetical protein	NA	NA	NA	NA
WP_034117611.1\|4195813_4196032_-	hypothetical protein	A0A2H4J1L2	uncultured_Caudovirales_phage	2.3e-21	79.2
WP_034117914.1\|4196154_4196397_+	hypothetical protein	A0A2H4J1H6	uncultured_Caudovirales_phage	6.4e-36	85.0
WP_034117612.1\|4196433_4197159_-	hypothetical protein	A0A2H5BFW5	Vibrio_phage	7.8e-53	45.9
WP_034117613.1\|4197155_4197401_-	hypothetical protein	NA	NA	NA	NA
WP_034117614.1\|4197450_4197852_-	HNH endonuclease	A0A1P8DTS4	Salmonella_phage	5.3e-27	46.2
WP_034117615.1\|4198407_4198626_+	hypothetical protein	NA	NA	NA	NA
WP_034117915.1\|4198728_4198962_+	hypothetical protein	A0A1B0VP27	Pseudomonas_phage	1.3e-33	94.6
WP_034117616.1\|4198983_4199763_-	DUF2786 domain-containing protein	A0A2H4JCP9	uncultured_Caudovirales_phage	2.7e-11	30.7
WP_098950860.1\|4199842_4200505_+	hypothetical protein	NA	NA	NA	NA
WP_034117618.1\|4200684_4200918_+	hypothetical protein	NA	NA	NA	NA
WP_034117619.1\|4201008_4201824_-	DUF2303 family protein	Q8SBF9	Shigella_phage	1.9e-47	45.1
WP_034117620.1\|4201867_4202215_-	hypothetical protein	NA	NA	NA	NA
WP_034117621.1\|4202306_4202621_-	hypothetical protein	NA	NA	NA	NA
WP_034117622.1\|4202617_4202899_-	hypothetical protein	NA	NA	NA	NA
WP_034117623.1\|4203322_4203706_-	LuxR family transcriptional regulator	A0A2H4JA92	uncultured_Caudovirales_phage	2.0e-23	61.2
WP_034117624.1\|4204036_4204351_+	DUF1654 domain-containing protein	A0A127KNY9	Pseudomonas_phage	1.5e-13	43.4
WP_034117625.1\|4204418_4205300_-	LexA family transcriptional regulator	H2BD63	Pseudomonas_phage	8.8e-51	41.5
WP_034117916.1\|4205404_4205599_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
WP_138183547.1\|4205744_4205969_+	hypothetical protein	NA	NA	NA	NA
WP_080752911.1\|4205965_4206676_+	helix-turn-helix domain-containing protein	A0A1B0YZZ0	Pseudomonas_phage	2.2e-31	71.6
WP_034117626.1\|4206668_4208039_+	replicative DNA helicase	H2BD70	Pseudomonas_phage	9.6e-137	57.2
WP_034117628.1\|4208244_4209573_+\|integrase	site-specific integrase	A0A2D1GND4	Pseudomonas_phage	5.9e-131	56.6
WP_178081026.1\|4209869_4210259_+	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	2.8e-33	57.8
WP_034117630.1\|4210326_4211637_-	hypothetical protein	NA	NA	NA	NA
WP_034117631.1\|4211955_4212300_+	hypothetical protein	A0A2H4J893	uncultured_Caudovirales_phage	1.9e-09	38.8
WP_034117632.1\|4212323_4213061_+	hypothetical protein	NA	NA	NA	NA
WP_034117633.1\|4213255_4213807_+\|terminase	terminase small subunit	A0A1W6JT69	Pseudomonas_phage	3.0e-41	53.4
WP_178081027.1\|4213769_4215704_+\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	3.0e-160	63.8
WP_034117641.1\|4215705_4216395_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	1.1e-67	70.9
WP_034117642.1\|4216391_4217981_+\|tail	phage tail protein	A4PE45	Ralstonia_virus	2.5e-67	49.8
WP_138183548.1\|4217977_4218427_+\|tail	phage tail protein	NA	NA	NA	NA
WP_034117643.1\|4218518_4219691_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	5.1e-187	83.8
WP_098950861.1\|4219703_4220207_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	7.0e-69	74.9
WP_034117644.1\|4220219_4220528_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	4.8e-20	50.5
WP_098950862.1\|4220676_4223931_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	6.1e-105	43.2
WP_034117646.1\|4223940_4224807_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	4.8e-110	71.6
WP_034117647.1\|4224781_4224988_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.6e-24	79.1
WP_034117648.1\|4224984_4225443_-	hypothetical protein	NA	NA	NA	NA
WP_034117649.1\|4225528_4226575_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.7e-157	81.7
WP_034117650.1\|4226631_4227165_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	1.0e-70	76.8
WP_098950863.1\|4227161_4227686_+\|lysis	lysis protein	A0A2H4IZW4	uncultured_Caudovirales_phage	1.9e-61	77.0
WP_098950864.1\|4227839_4228193_-	hypothetical protein	A0A2H4IZV2	uncultured_Caudovirales_phage	1.1e-41	75.6
WP_080753012.1\|4228494_4228671_-	DUF3606 domain-containing protein	NA	NA	NA	NA
WP_098950866.1\|4229663_4229951_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
4228883:4228931	attR	NA	NA	NA	NA
WP_098950867.1\|4230436_4230835_+	VOC family protein	NA	NA	NA	NA
WP_098950868.1\|4230905_4232237_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_098950869.1\|4232238_4234431_-	TonB-dependent receptor	NA	NA	NA	NA
WP_098950870.1\|4234628_4235669_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_098952644.1\|4235896_4237594_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_098950871.1\|4237590_4238787_+	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_032896314.1\|4238807_4239218_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_056787120.1\|4239225_4239651_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_098950872.1\|4239647_4239980_+	type II secretion system protein	NA	NA	NA	NA
WP_032896321.1\|4239976_4240585_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_098950873.1\|4240581_4241283_+	general secretion pathway protein GspK	NA	NA	NA	NA
WP_032896325.1\|4241279_4242272_+	general secretion pathway protein GspL	NA	NA	NA	NA
WP_032896326.1\|4242246_4242849_+	type II secretion system protein M	NA	NA	NA	NA
WP_098950874.1\|4242845_4243346_+	general secretion pathway protein GspN	NA	NA	NA	NA
WP_098950875.1\|4243351_4245478_+	type II secretion system secretin GspD	R9TEZ5	Vibrio_phage	1.2e-16	29.0
WP_169918401.1\|4246511_4248905_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.1e-09	31.7
WP_098950877.1\|4248924_4249896_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_047711276.1\|4249888_4250662_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-34	39.7
WP_098950878.1\|4250680_4251604_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_098950879.1\|4251616_4253200_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_032896335.1\|4253211_4253634_+	RidA family protein	NA	NA	NA	NA
WP_098950880.1\|4253676_4254513_-	acid phosphatase	NA	NA	NA	NA
WP_098950881.1\|4254684_4255104_+	chemotaxis protein CheY	NA	NA	NA	NA
WP_098950882.1\|4255107_4256313_-	DUF1835 domain-containing protein	NA	NA	NA	NA
WP_032896341.1\|4256598_4257675_-	aldo/keto reductase	NA	NA	NA	NA
WP_098950883.1\|4257890_4258523_+	glutathione S-transferase	NA	NA	NA	NA
WP_032896344.1\|4258539_4259460_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032896346.1\|4259459_4260344_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_098950884.1\|4260424_4261357_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_032896349.1\|4261511_4261787_-	hypothetical protein	NA	NA	NA	NA
WP_032896352.1\|4262361_4262766_+	endoribonuclease L-PSP	NA	NA	NA	NA
WP_098950885.1\|4262877_4264365_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_056787186.1\|4264601_4265771_+	flavin-dependent monooxygenase	NA	NA	NA	NA
WP_032896359.1\|4265827_4266337_+	flavin reductase family protein	NA	NA	NA	NA
WP_098950886.1\|4266333_4267656_-	hypothetical protein	NA	NA	NA	NA
WP_078803433.1\|4267873_4269373_+	APC family permease	NA	NA	NA	NA
WP_098950887.1\|4269335_4269902_+	DUF3156 family protein	NA	NA	NA	NA
WP_098950888.1\|4270017_4270959_+	transcriptional regulator FeaR	NA	NA	NA	NA
WP_098950889.1\|4271883_4272102_+	hypothetical protein	NA	NA	NA	NA
WP_098952610.1\|4272408_4273710_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

4388990 : 4420239

Bacillus_virus(20.0%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003192254.1\|4388990_4390274_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.6e-138	59.7
WP_003192252.1\|4390462_4392859_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-219	51.6
WP_003174819.1\|4393007_4393280_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	1.8e-18	59.6
WP_047711204.1\|4393508_4395383_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_098950942.1\|4395464_4396808_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.4e-60	39.3
WP_098950943.1\|4397091_4397883_+	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_019819480.1\|4398747_4399782_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_098950944.1\|4399786_4400917_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_057711254.1\|4401128_4403168_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_098950945.1\|4403224_4404112_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_032896532.1\|4404219_4404780_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	2.5e-19	43.0
WP_098950946.1\|4404894_4405722_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_098950947.1\|4405823_4406948_-	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_098950948.1\|4407060_4407915_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032896540.1\|4407890_4408781_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032896542.1\|4409039_4410365_+	MFS transporter	NA	NA	NA	NA
WP_003192227.1\|4410474_4411179_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_098950949.1\|4411301_4412600_-	protein kinase	NA	NA	NA	NA
WP_098950950.1\|4412637_4413732_-	cell division protein ZapE	NA	NA	NA	NA
WP_169918422.1\|4413922_4414414_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_044274670.1\|4414407_4414953_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_003192220.1\|4414971_4415514_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_032896551.1\|4415516_4416005_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_032896553.1\|4416031_4416820_+	molecular chaperone	NA	NA	NA	NA
WP_098952662.1\|4416892_4419241_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_050499493.1\|4419318_4420239_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_7

4536610 : 4542848

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098951005.1\|4536610_4537891_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.4e-97	53.5
WP_032896685.1\|4537891_4539286_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_098951007.1\|4539411_4540407_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_098951008.1\|4540495_4541497_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	5.9e-168	86.0
WP_098951010.1\|4541493_4541829_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	2.1e-45	77.5
WP_044274586.1\|4541825_4542104_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.0e-25	57.6
WP_032896693.1\|4542103_4542454_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.5e-38	67.5
WP_032896695.1\|4542455_4542848_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.3e-57	85.4

DBSCAN-SWA_8

4721899 : 4771579

Planktothrix_phage(50.0%)

protease,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_098951163.1\|4721899_4722925_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.5e-20	32.1
WP_098951165.1\|4723044_4723689_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_032896864.1\|4723692_4724694_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_098951167.1\|4724844_4725960_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_098951169.1\|4725987_4726743_-	D-threitol dehydrogenase	NA	NA	NA	NA
WP_098951170.1\|4726896_4727904_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003191840.1\|4727938_4728916_-	ABC transporter permease	NA	NA	NA	NA
WP_098951172.1\|4728912_4730400_-	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_044274312.1\|4730662_4731124_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_003191835.1\|4731187_4732168_+	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_098951174.1\|4732565_4734134_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	6.9e-38	42.9
WP_098951176.1\|4734770_4735619_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003191828.1\|4735671_4736334_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_034135844.1\|4736346_4737009_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_098951178.1\|4737005_4737788_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-31	38.4
WP_032896881.1\|4737802_4738192_+	RidA family protein	NA	NA	NA	NA
WP_003191821.1\|4738356_4739121_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_098951180.1\|4739130_4740339_+	amino acid deaminase	NA	NA	NA	NA
WP_098951182.1\|4740483_4741392_+	sugar kinase	NA	NA	NA	NA
WP_003174397.1\|4741510_4741786_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_098951183.1\|4741829_4744367_-	PAS domain-containing protein	NA	NA	NA	NA
WP_098951185.1\|4744505_4746461_-	acetoacetate--CoA ligase	NA	NA	NA	NA
WP_003191811.1\|4746588_4747362_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_003191810.1\|4747369_4748761_-	GntP family permease	NA	NA	NA	NA
WP_098952670.1\|4748993_4750295_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_098951187.1\|4750484_4751876_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_098951189.1\|4751898_4753470_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.2e-19	34.4
WP_032896898.1\|4753480_4754503_-	ABC transporter permease	NA	NA	NA	NA
WP_005788805.1\|4754502_4755561_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_098951193.1\|4755560_4757420_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003208024.1\|4757550_4757832_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_098951194.1\|4757940_4758435_-	DUF1543 domain-containing protein	NA	NA	NA	NA
WP_014718214.1\|4759137_4759653_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_169918279.1\|4760121_4761666_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_098951200.1\|4761691_4762189_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_056788160.1\|4762216_4763695_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_098951202.1\|4763709_4764111_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_098951204.1\|4764100_4765888_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_098951206.1\|4765851_4766865_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_098952672.1\|4766871_4768383_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_032896909.1\|4768418_4768550_+	hypothetical protein	NA	NA	NA	NA
WP_098951208.1\|4768561_4769758_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_032896913.1\|4769763_4770249_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_098951209.1\|4770250_4771579_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP023969.1|WP_034117915.1|4198728_4198962_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP023969.1|WP_034117915.1|4198728_4198962_+|hypothetical-protein

4198728_4198962_+

77 aa aa

4186942-4273710

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP023969_25	Orphan	25.1\|5973781\|38\|NZ_CP023969\|CRISPRCasFinder	5973781-5973818	38	4272163-4272126	2

1. spacer 25.1|5973781|38|NZ_CP023969|CRISPRCasFinder matches to NZ_CP023969 position: 4272163-4272126, mismatch: 2

gtcggctggcaggccgccatcgcaggcaagccagctcc	CRISPR spacer
gtcggctgtcaggccgccttcgcaggcaagccagctcc	Protospacer
******** ********* *******************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023969

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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