CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022479	Faecalibacterium prausnitzii strain A2165 chromosome, complete genome	2 crisprs	RT,DEDDh,PD-DExK,csa3,cas3,WYL,DinG	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022479_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022479_1

1779051-1779164

Orphan

Consensus_repeat	Method
TGCGGCGCTTGCGAGGGCGCTTGCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022479_1

>merge|NZ_CP022479|1|1779051-1779164|CRISPRCasFinder
TGCGGCGCTTGCGAGGGCGCTTGCCCCGTTGGTGCTGTCACCATTGAGAATGGTGTTGCAGTTGTGAATGCAGACGCTTGCATCGATTGCGGCGCTTGCGAGGGTGCTTGCCCC

>NZ_CP022479|1|1|1779051-1779164|CRISPRCasFinder
TGCGGCGCTTGCGAGGGCGCTTGCCCC	GTTGGTGCTGTCACCATTGAGAATGGTGTTGCAGTTGTGAATGCAGACGCTTGCATCGAT
TGCGGCGCTTGCGAGGGTGCTTGCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022479.1\|WP_005929049.1\|1780135_1780975_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223390
NZ_CP022479.1\|WP_005929064.1\|1784846_1785812_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273213
NZ_CP022479.1\|WP_005929072.1\|1787044_1788616_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP022479.1\|WP_005929065.1\|1785808_1786447_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP022479.1\|WP_147585116.1\|1786549_1787014_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022479.1\|WP_035393236.1\|1789228_1789588_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|377579
NZ_CP022479.1\|WP_005929006.1\|1766387_1768730_-\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP022479.1\|WP_005928997.1\|1763616_1764912_+\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
NZ_CP022479.1\|WP_005929057.1\|1781711_1782479_+\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP022479.1\|WP_005929000.1\|1764982_1765762_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP022479.1\|WP_035393228.1\|1768946_1769972_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|177883
NZ_CP022479.1\|WP_035393233.1\|1777788_1778727_+\|stage-0-sporulation-family-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP022479.1\|WP_005929020.1\|1771534_1772104_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022479.1\|WP_035393226.1\|1765763_1766207_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP022479.1\|WP_035393230.1\|1772327_1773143_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
NZ_CP022479.1\|WP_005929053.1\|1781226_1781715_+\|YfcE-family-phosphodiesterase	unknown	unknown	gnl\|CDD\|223695
NZ_CP022479.1\|WP_005929060.1\|1782750_1783287_-\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP022479.1\|WP_005929046.1\|1779322_1779997_+\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP022479.1\|WP_005929026.1\|1773273_1777200_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP022479.1\|WP_005929018.1\|1770231_1771305_-\|galactose-mutarotase	unknown	unknown	gnl\|CDD\|185696

Protein	Function_ID	Function_description	E-value
NZ_CP022479.1\|WP_005929064.1\|1784846_1785812_-\|hypothetical-protein	gnl\|CDD\|273213	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit. This model describes the N-terminal half of the delta' subunit of DNA polymerase III. Delta' is homologous to the gamma and tau subunits, which form an outgroup for phylogenetic comparison. The gamma/tau branch of the tree is much more tighly conserved than the delta' branch, and some members of that branch score more highly against this model than some proteins classisified as delta'. The noise cutoff is set to detect weakly scoring delta' subunits rather than to exclude gamma/tau subunits. At position 126-127 of the seed alignment, this family lacks the HM motif of gamma/tau; at 132 it has a near-invariant A vs. an invariant F in gamma/tau. [DNA metabolism, DNA replication, recombination, and repair].	2.6906e-32
NZ_CP022479.1\|WP_035393236.1\|1789228_1789588_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|377579	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891). This family consists of hypothetical bacterial proteins of unknown function as well as phage Gp49 proteins.	3.07351e-33
NZ_CP022479.1\|WP_005929072.1\|1787044_1788616_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	8.08341e-147
NZ_CP022479.1\|WP_005929026.1\|1773273_1777200_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	3.32331e-153
NZ_CP022479.1\|WP_005929006.1\|1766387_1768730_-\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP022479.1\|WP_005928997.1\|1763616_1764912_+\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	1.38071e-108
NZ_CP022479.1\|WP_005929057.1\|1781711_1782479_+\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	9.64101e-67
NZ_CP022479.1\|WP_035393233.1\|1777788_1778727_+\|stage-0-sporulation-family-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	4.40808e-82
NZ_CP022479.1\|WP_035393228.1\|1768946_1769972_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|177883	PLN02240, PLN02240, UDP-glucose 4-epimerase.	0
NZ_CP022479.1\|WP_005929000.1\|1764982_1765762_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.83519e-20
NZ_CP022479.1\|WP_005929049.1\|1780135_1780975_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	1.11206e-111
NZ_CP022479.1\|WP_005929053.1\|1781226_1781715_+\|YfcE-family-phosphodiesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	1.35728e-34
NZ_CP022479.1\|WP_005929065.1\|1785808_1786447_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	0.00245768
NZ_CP022479.1\|WP_005929060.1\|1782750_1783287_-\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	2.18872e-77
NZ_CP022479.1\|WP_035393226.1\|1765763_1766207_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.99974e-12
NZ_CP022479.1\|WP_005929046.1\|1779322_1779997_+\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	4.73917e-57
NZ_CP022479.1\|WP_035393230.1\|1772327_1773143_-\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	7.4866e-11
NZ_CP022479.1\|WP_005929018.1\|1770231_1771305_-\|galactose-mutarotase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	3.51357e-151

>NZ_CP022479.1|WP_035393233.1|1777788_1778727_+|stage-0-sporulation-family-protein
MKKVISVRFKENGKSYYFDPAGADIKTGEYVIVETARGIECGEVVQGVKEIADSAVSKALKPITRMADSVDVRRMRQNREDEKRAYHTCQECIARHGLEMKLVEAEYTLDRSKIMFYFTADGRVDFRELVKDLAGIFHTRIELRQIGVRDESKMIGGLGICGQPFCCSRFLKDFQPVSIKMAKEQGLSLNPTKISGACGRLMCCLSYEENAYEYLNSIMPMVGSTVRTPDGLGTVLEVNPISGYLRVRCGTEALTPRYYKVGVCEYISGGKRAPRRPDPDDDYSGVRNPAPVVAAADEKGNVGCGKCPKKEK
>NZ_CP022479.1|WP_005929026.1|1773273_1777200_-|efflux-RND-transporter-permease-subunit
MEKFSVKKPFTVLVAVIMVIMLGLVSVQNMQTNLLPNVNTPYLMVVTVYPGASPERVENEVSDVMESALGTISGVKNVTATSAENYSLLLMEFEDDTDMNSAVVKVSNKVDQTASSLPSTCMTPSIIEYTLNMNAFMTVAVSREGSDSYELADFVNDTMVPYIERQGGVSNISANGLVTRMVQVQLDQEKIDAINEKLLEVIDVQLADAKAQLDTAEAQIEAGRKQYETQLASYDKLVSDTINSQYSGELQDSFMLVKKQAQALLDSVNQLIAVVNEPEIQQALIDVRDGLQRVVDKFNETGMQDIDSLIEIVAELRDITDKLTTALQELQQRLNAQGDTAGTTAGELADDLQVQQSLNNIYSTLESTIKAMDDVPGLMDQFTQIVGSYSQQQLQAYIKFTEAREMLNDYEKQLEDAKQQYEDAKQMAMENSDVAKMLDIDTLAQLIYAQNFSMPAGYVKDSSNKSWLLKVGEEYDSIEDISGALLLHVDGFGDVRLSDVADVQIIDNAEDSFTRLNGERSVVLKIFKSNSSSAGEVSGNCKAAFKELEQKYDGLHVVVLSNQGNYISIIVSSILSSMLIGAALAIIVLAIFLKDIKPTLVVGISIPLSVLFAVVLMYFTGLDMNIMTLAGLSLGIGMLVDNSIVVIENIYRLRSRGVPAARAAVQGTKQVGMAIMASTLTSVCVFLPVIFTSGVIKSLLQPMSMCIGYCLAASLIVALTVAPAASSTLLKNSKPKELKWFDKVQEKYVKSLEWCFQHRWAPLGAAVVLLVFCGWRVMSMGVEMLPTITSNEAIVTLSTEKDMTKEESYAVAENVIDALLAVDNVEEVGVTTDSRVAGMDVGQLGLPQTITDLLKAANSYGTYQINVMLDESLSSRQIEQAREALEEAVNGVENCTATVEISGMQELTSQLDMGLTVQVSGSDIDTMTALSEKVVDMVNEMDGFTNATNGLGSGDATINLQIDRDKVRSYGLTVAQVYQQIAAKLTTTTTAQTPVAIDGSTMNVQISNNLDPMTKENMMDMTFTTSVMAADGTTETGTCTLGDMATWVTGSTPDSITSKNQTRYISVTADAVEGTNTTTETRALEKKLNEFAASDEMPEGCSFYMGGGSEINGMVVDQMGQWMFLALPFVYLVMVAQFQSLLSPFIVLFTIPLAFTGGLLGLLLTGQQLTMISLMGFIVLMGTVVNNGIVFVDYANQLRIGGMERRAALIATGKTRMRPILMTTLTTVLAMLQLVFSGDMASQLMSGMAIVIIFGLTYATLMTLYVVPLMYDILFKKPPLNVDIGDENLDDIPDDAAEYIAQNTAQPE
>NZ_CP022479.1|WP_035393230.1|1772327_1773143_-|hypothetical-protein
MRFVQLDEKNEERMNAIRKFTLMDDTFMTQVFSGDKESTQELLRIILKRKDLTVARSATQLTIGNLFGRSVRLDIYATDDAGKQYDIEVQQEDKGAAPERARLNSALFDSRLTTSGEKYSDLPETYIIFITANDVLGDGLPVYNIERTIQETGKLFHDRAHIVYVNGAYRGTDEVGALMQDFRCDDYRDIRNPKIRARVKYFKEETEGVAAMCKTMQVIVDREREDAEVAKGKRIALNLWKNGEHDLDKIAQTTELSLEQVREAITEPCSA
>NZ_CP022479.1|WP_005929020.1|1771534_1772104_-|hypothetical-protein
MKMLKKMAALLLVGVMALALLTACGDEAPSKSFAQQVEETAFEAMKQSTGIQVNDADLKKLAESKIDQINMEDGTFNFKNALDMQALMKEIQELKDVHAEINVKAAMPFPESVVTTDKPYKVLEVTPENIGDVAKIVARMGKLNSIENDGLKVNKLGIVAKTVNGKTYVAVAMDVTTSVEEILSMLGVG
>NZ_CP022479.1|WP_005929018.1|1770231_1771305_-|galactose-mutarotase
MAQFLSKPFGMTPNGEKINEYIISNPGGLAVSVLNYGCIIKNIWVPTKSGPVDVVLGHDTYADYVKDFESSGSTCCGAFVGRYANRIENAVFNVGGKTYQLEANNGKNHLHGTFPRKLYEVKTFGDTLLLEAESPDGEDGFPGNLKISVRYILTEDNALRMDYRVSSDADTIINLTNHTYFNLDGGGDVLGQKLRIYASRYLEGNNETCPTGNILPVAGTPMDFRAGKPIGRDIDTGFSQTTMVGGGYDHCFVIDRGRGASQSLCAWASSDKTGISMKVYTTQPGVQLYTGNFLQDCPAPGKGGVPMQKYGGFALETQHFPCSPSHPEFPSTALRAGKVFRANTTLRFFTGKQCGKL
>NZ_CP022479.1|WP_035393228.1|1768946_1769972_-|UDP-glucose-4-epimerase-GalE
MAILVSGGAGYIGSHTCIELLNAGFDIVVADNYYNASPVVLDRVKQITGKDFRFYQADMTKHEDVEKIFTECPDIDAVIQFAAYKAVGESVSKPIEYYYNNLNCTLVILDVMRRHNCRNFVFSSSATVYGDPASVPITEDFPVGATTNPYGTTKAFTERILTDVCKADPTLNVALLRYFNPIGAHKSGLIGEDPNGIPNNLMPYIAKVAVGKLEKVHVFGNDYPTPDGTGVRDYIHVVDLARGHVCAIKKLQTNCGLFICNLGTGHGYSVLDVIHAFEKACGKKLPYVIDPRRPGDIAECYADPTKAKNELGWVAEYGIEEMCADSWNWQKNNPDGYHTVK
>NZ_CP022479.1|WP_005929006.1|1766387_1768730_-|ferrous-iron-transport-protein-B
MTLKELKIGESAVIDTVGGTGELRQHFLDMGLIPGEKVTLVKFAPMGDPMELQIHGYELTLRLDDAARIEITPAEAPAAAPARKAGRMVEHPGLGEGGRYHTKKGEHPLPDGTVLTFALAGNQNCGKTTLFNQLTGSNQHVGNFPGVTVDRKSGAIREHPDTEVTDLPGIYSMSPYSSEEIVTRQFIIGEKPTGIINIVDATNIERNLYLTMQLMELDTPMVLALNMMDEVRGNGGTININEMEAMLGIPVVPISAAKNEGVDELVDHAIHVAKYQERPGRMDFCGEDDHGGAVHRCIHGIIHLIEDHARAAGIPVRFAATKLVEGDPRIEEALKLDQNEKEMIEHIILQMEQERGLDRAAAIADMRFHFIHQLVNQTVVKPHQSKEQLRSARIDRFLTGKYTAIPAFVGIMALVFYLTFGVIGAGLQGLLELGIENLTILVDNALTAWNVNDAVHSLVIDGIFTGVGSVLSFLPIIVTLFFFLSLLEDTGYMARVAFVMDKLLRRIGLSGRSIVPMLIGFGCTVPGVMASRTLPSERDRKMTILLTPFMSCSAKLPIYSLFAVTFFPEYAALVMVGLYFLGILVGIGMAFLLKGTLFKGEAVPFVMELPNYRLPGLKNVAQLLWEKARDFLERAFTVIFLATIIIWFLQNFDFQLSLTADPQESILAWIASGIAPLFAPLGFGDWRVSTALITGFMAKESVVSTLTILYGSSAALGAALSPAAAAPLLVFCLLYTPCIAAVAAVKREMGGRWATVMVVNQCVVAWLAALVVRFLAVAVL
>NZ_CP022479.1|WP_035393226.1|1765763_1766207_-|MarR-family-transcriptional-regulator
MRELNPSVEFANKTGLVYSAVCKPLCQKLHLPQTAFDILMFLANNPNYTTARDIVEVRHIKANLVSVNVDKLVQEGFLERRPVPGDRRKTELACTEKAQSIIEQGRRMQDDFIRRLMAGLEEEKLEIFFEVIDTMNENLDAILEGEK
>NZ_CP022479.1|WP_005929000.1|1764982_1765762_-|sulfite-exporter-TauE/SafE-family-protein
MNLLFTIIVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLGMDPYMAVGIALSSDVLASAVSAYTYHKNKNLDIKNGLIMMASVLLFTVVGSWVASLVPSTTMGSFSVFMTFLLGIKFIVKPVMTTKEAMQGVSAKKRALQSIVCGVVIGMICGFIGAGGGMMMLLILTSVLGYELKTAVGTSVFIMTFTALTGAVSHFTIGGAPDWTVFILCVLFTLLWARIAAVFANKADAKTLNRATGIVLVVLGIVVMGFNLLTK
>NZ_CP022479.1|WP_005928997.1|1763616_1764912_+|trigger-factor
MKLVSVETPEKSVCKMTFSATAEELEAASNAVYERTRASYTIKGFAKGEADRAQIEADRGEHTFWYDAINDLMDRDVPALYEAAMAEHGFKAVDEPSYDLVSVKKDEGFVATATTPLQPELNLTQTTGFHVECVTPAVTDKEIDAVLERRRNAAAELVPHKGPAVKGNIVHIDYEGLLDGKPFQGGSAQNQPLQLGSGRMIPGFEDGILGHKGGEEFEINVTFPVRYHVKDLAGKPVVFKIKLIDVCVRQLPALNSDFAKKVGKVDTMEAFREQVRKQLHDGKHASALNRAKDQVLTQLASAAEGELPSVLVESTYQQEMQNIQQQLQMQRMSLDRYLSQIHQTRENFTANVHAAAEKNTRARMALLQVAQNEGLVPTDEEITKNLQERADRTKKTLEEVKANANIPAMQRSEAIRRAADWVIEHSTIEEK
>NZ_CP022479.1|WP_005929046.1|1779322_1779997_+|methyltransferase
MEHSTEILYNRTRVYCSAVHRFGSDALLLARFSEPKRAWRAADLCSGCGIVSLEWHDRGHRGPCLGLELQPEASALLAAACTEQGIEHITPVCADLRSFREGEGSYDLCACNPPYFTAGEQAADRARATARHETDCTLDDVCKCAFRLLKDGGRLSLCHRPERLAEVLAVLRANRLEPKRLAFVKNRPDAAPWLFLVEAQKNRKTGLRVEPDVLISAGAAMYGR
>NZ_CP022479.1|WP_005929049.1|1780135_1780975_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MAGTLYIVATPIGNLDDMPPRVAATFGAADFIAAEDTRVTMKLLNFLGLKKPMVSYYEHALQKGEGILRRIEEGENCALCSDAGMPCVSDPGEVIVRDALARGIKVVPVPAASACVTALAVSGQDTSRWVFEGFLPVNKKQKRERLAELRGEKRTVIFYEAPHKLRTTLDDLTAAFGPERSITLCRELTKLHEEIWKTTLGEAQTHYAENDPRGEYVLVMAGAPAAEAEEELTLEQAAQRALELTRNGYAASAAAKAAAQGTPYSKSEVYKQLLALQAD
>NZ_CP022479.1|WP_005929053.1|1781226_1781715_+|YfcE-family-phosphodiesterase
MTKLLILSDSHNSASAVERILHAESDANAVVFLGDGLRDLEEALTLHPKMKVYAVAGNCDFGALEPLDGLAAFDQVVVFYTHGHMYGVKYDLDTLADAAAARGAEVALFGHTHKPIALQKNGVFLFNPGSCGRCYTGPNTYGVMLLDKGKITSFAHKEVPQQ
>NZ_CP022479.1|WP_005929057.1|1781711_1782479_+|biotin--[acetyl-CoA-carboxylase]-ligase
MSINEVRYLPECGSTNAYMKEHFEEFGPVGAVYTTNQTAGRGRLGRTWVNAEGKALYYTVAIREPLAQPATLPLLASLAVRRQLALRYGVDCQIKWPNDLLLNGKKIVGILCESVCYGYQQQGRGILCGIGINLAQPQSYFDAADLPHGTSLALQGAAIDLEQDPGWLAEALTDFGFDRPLYTFARDGFAPFREEYKAACVNIGRRVTFDLPDGGQGAGEAVDVDEEGRLVVRTDSGEEHVFTGEVSVRGIYGSL
>NZ_CP022479.1|WP_005929060.1|1782750_1783287_-|gamma-carbonic-anhydrase-family-protein
MLLPFGGKVPRDEGAVFVAPNATVLGDVVLGPGSSVWYGAVLRGDDGTLTLGENTNVQDNAVLHCDPGGAVTLGKNVTVGHCALVHGCTVGDGSLIGMHATLLNHCVVGKNCIIGAGALVPEGKIIPDDSLVVGVPGKIIKQVSPEQAAASLANAAHYVGEGRRHAAALRKEEKGETE
>NZ_CP022479.1|WP_005929064.1|1784846_1785812_-|hypothetical-protein
MMIDRLEGNSELKTSVRLMLGGRRMTHSVLLVGEEGLGTGFAARCVAADYLYPNGGAPAEALLRGECCRAVAKAGKRDSGQIETGIVREAISVTGMGSGGRYLVGQVTAMRSEIFNTSLSAEGRAVLLYHVERMNEESANALLKVMEEPPEGVLFLLTADSLAGVLPTIRSRCISFAVAPVSPADCARYCTAQGVDSKDAVLYSELFDGHIGTVLDAARDEARRAQVDKALALAKAAAAQDSYAAAVLLSAYEKDKVGVAALLADFRAVAAAGLRGSPRAPVQGDAARKALAAADAAIQRLGAQVNPKITLSVLAMKFRTF
>NZ_CP022479.1|WP_005929065.1|1785808_1786447_-|rhomboid-family-intramembrane-serine-protease
MNWITKLERKYGRFCIPNLINILIGGQILVYAIELFVNQYISFYLSLSRSALFAGQIWRLFTFVLVPFSGGGPLSVVLGIYFTWFVGSALEREWGDFRFNLYVLLGMAGAWLACLLTGSADTYCLSLSLLLAFAMLYPELQVLLFFVIPLKVKYFGIFAAALWVFSFLSMGMLGKLNYLLCMLGFLLFFGPQAWHNIRAWIRREQWKRKNRR
>NZ_CP022479.1|WP_147585116.1|1786549_1787014_+|hypothetical-protein
MNKGIWLSVHPSAKTAGCIHFWCIQMDLSTLSTGFSTGIVKKAPVFPRCFPLFPLSFPHFPARWFIHGVLYRADLCENQGNYGPLHLFSERKSNPKIYFLQQAENPLVEFLPVGMKETVVFHTHFLQKSTCGKQRENLSFQQKETALSGKAVRL
>NZ_CP022479.1|WP_005929072.1|1787044_1788616_-|magnesium-transporter
MEMEEKKNELTEAALPVQELPADIPDEVRQKLVRDLNEEATEDLKQDIREAEKEEARDEEVKADPEMLTKSRLLKMLVKKQYVKLREVTEEEQPADLAELLEELDENNRLVVFRLLKKEVATEAFAYMSDEARDDLVNAFSDVELVSAIEEMSLDDAADLLEDMPAGVVKRVLEKSSKQTRESLNKLLNYPESSAGSLMTPEYVRLKKEMNVRQALDAIRRQGENAETVYINYVVERNRLKGVVSARDLLLADPDTPLVDIMDDNVVTVKVTDDQEFVAREMQRYDFTAMPVVDNEGMFVGIITIDDAIDVLTDESTEDMQKMAAILPADEATTYFGTSVWTHAKQRIPWLLILMLSATFTGMVTTHYEEAFVSLPLLVSFMPMLMDTAGNCGNQISTLMVRGLALGEVEPADFLKVLAKELRVSAIVGAVLGLVNGLRIYLMYTFIFAGQYDNVMGYAIVVSVSLFFSVILAKLVGGMLPLAAKKLGADPAIMATPFITTIVDACSLILYFQIAQIVFRNMM
>NZ_CP022479.1|WP_035393236.1|1789228_1789588_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MECYDVDFYHKENGDCPVDDFLESLDTKMRAKVLGAVALLEANGPQLREPYSKFIGDGIFEIRAKQSSNITRVLYFFYIGKRIVLTNGFIKKTQKTPPEEIALAKKYRADYLERKEKIS

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Crispr_ID: NZ_CP022479_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022479_2

2939612-2939721

Orphan

Consensus_repeat	Method
CAAGTGCATCGGCTGCGGTGCCTGCGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022479_2

>merge|NZ_CP022479|2|2939612-2939721|CRISPRCasFinder
CAAGTGCATCGGCTGCGGTGCCTGCGTGGAGGCCTGCCCCTGGCACATGCCCACCGTCAACCCCGAGACCGGCAAGTCCTCCAAGTGCATCGCCTGCGGTGCCTGCGTGG

>NZ_CP022479|2|2|2939612-2939721|CRISPRCasFinder
CAAGTGCATCGGCTGCGGTGCCTGCGTGG	AGGCCTGCCCCTGGCACATGCCCACCGTCAACCCCGAGACCGGCAAGTCCTC
CAAGTGCATCGCCTGCGGTGCCTGCGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022479.1\|WP_035393766.1\|2937304_2938042_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|376873
NZ_CP022479.1\|WP_005931892.1\|2948698_2949586_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270255
NZ_CP022479.1\|WP_099357312.1\|2943346_2944585_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP022479.1\|WP_005931922.1\|2939816_2941973_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236629
NZ_CP022479.1\|WP_005931919.1\|2941999_2942917_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP022479.1\|WP_005931895.1\|2947677_2948610_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|238451
NZ_CP022479.1\|WP_005931889.1\|2949606_2950281_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NZ_CP022479.1\|WP_005931901.1\|2946202_2946700_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP022479.1\|WP_005931898.1\|2946692_2947673_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP022479.1\|WP_099357358.1\|2931430_2931658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022479.1\|WP_005931943.1\|2931885_2932440_+\|ECF-type-riboflavin-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|184218
NZ_CP022479.1\|WP_035393769.1\|2930028_2930949_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP022479.1\|WP_005931939.1\|2934236_2935067_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP022479.1\|WP_005931941.1\|2932525_2934247_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP022479.1\|WP_005931962.1\|2927327_2928065_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022479.1\|WP_005931955.1\|2928274_2930029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238731
NZ_CP022479.1\|WP_005931937.1\|2935170_2937162_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
NZ_CP022479.1\|WP_005931907.1\|2944574_2945093_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|349770
NZ_CP022479.1\|WP_099357311.1\|2938225_2939137_+\|FMN-binding-protein	unknown	unknown	gnl\|CDD\|377242
NZ_CP022479.1\|WP_005931904.1\|2945111_2946131_+\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|239599

Protein	Function_ID	Function_description	E-value
NZ_CP022479.1\|WP_035393766.1\|2937304_2938042_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|376873	pfam02634, FdhD-NarQ, FdhD/NarQ family. A pan-bacterial lineage of proteins. Nitrate assimilation protein, NarQ, and FdhD are required for formate dehydrogenase activity. Structurally, they possess a deaminase fold with a characteristic binding pocket, suggesting that they might bind a nucleotide or related molecule allosterically to regulate the formate dehydrogenase catalytic subunit.	4.42389e-60
NZ_CP022479.1\|WP_005931892.1\|2948698_2949586_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270255	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.6058e-64
NZ_CP022479.1\|WP_099357312.1\|2943346_2944585_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.68963e-147
NZ_CP022479.1\|WP_005931922.1\|2939816_2941973_+\|hypothetical-protein	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP022479.1\|WP_005931919.1\|2941999_2942917_+\|hypothetical-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.18876e-29
NZ_CP022479.1\|WP_005931895.1\|2947677_2948610_+\|MOSC-domain-containing-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	1.15636e-74
NZ_CP022479.1\|WP_005931889.1\|2949606_2950281_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	3.80613e-72
NZ_CP022479.1\|WP_005931901.1\|2946202_2946700_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	7.75102e-97
NZ_CP022479.1\|WP_005931898.1\|2946692_2947673_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.00518e-135
NZ_CP022479.1\|WP_005931943.1\|2931885_2932440_+\|ECF-type-riboflavin-transporter-substrate-binding-protein	gnl\|CDD\|184218	PRK13661, PRK13661, ECF-type riboflavin transporter substrate-binding protein.	7.18499e-75
NZ_CP022479.1\|WP_035393769.1\|2930028_2930949_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	9.14725e-22
NZ_CP022479.1\|WP_005931939.1\|2934236_2935067_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.91164e-34
NZ_CP022479.1\|WP_005931941.1\|2932525_2934247_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	5.42904e-90
NZ_CP022479.1\|WP_005931955.1\|2928274_2930029_-\|hypothetical-protein	gnl\|CDD\|238731	cd01454, vWA_norD_type, norD type: Denitrifying bacteria contain both membrane bound and periplasmic nitrate reductases. Denitrification plays a major role in completing the nitrogen cycle by converting nitrate or nitrite to nitrogen gas. The pathway for microbial denitrification has been established as NO3- ------> NO2- ------> NO -------> N2O ---------> N2. This reaction generally occurs under oxygen limiting conditions. Genetic and biochemical studies have shown that the first srep of the biochemical pathway is catalyzed by periplasmic nitrate reductases. This family is widely present in proteobacteria and firmicutes. This version of the domain is also present in some archaeal members. The function of the vWA domain in this sub-group is not known. Members of this subgroup have a conserved MIDAS motif.	1.84707e-11
NZ_CP022479.1\|WP_005931937.1\|2935170_2937162_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	1.48505e-73
NZ_CP022479.1\|WP_005931907.1\|2944574_2945093_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|349770	cd03116, MobB, molybdopterin-guanine dinucleotide biosynthesis protein B. Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In Escherichia coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.	5.32749e-50
NZ_CP022479.1\|WP_099357311.1\|2938225_2939137_+\|FMN-binding-protein	gnl\|CDD\|377242	pfam04205, FMN_bind, FMN-binding domain. This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.	0.000117383
NZ_CP022479.1\|WP_005931904.1\|2945111_2946131_+\|molybdopterin-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	2.74002e-155

>NZ_CP022479.1|WP_099357311.1|2938225_2939137_+|FMN-binding-protein
MKQANHAPQSLWRRRLPGYAAMGAATLAMALGLGGLMHSRTTVAGTALPLADADAATYGVSAVYQLDDTTYYVVGSKQGFQSEVQAGVTLDRDGNVLDVKILAQAETDSLGAQCENPEFTAQYQGAAPFTLAGKRYTVTDPATGTAFAAAGSAGTDAAPAEAFDPAAWRAGDTSPEAEATRKMYEAGLTLSALNGQPMDDALIPPMDNSAEAVARRKLYAACLSKSAQDGEEQAVPYADWSAEKQAEYKLQAADLTTQGSAADTVSADMTQVDALSGATITSTAVTDIVNNSYFYVTEVLCAE
>NZ_CP022479.1|WP_035393766.1|2937304_2938042_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MQIMDQFGAAPGAESVRMPDGTERTLAAEHAAAILVNEQPAFRVVCTPELLPQLALGRLLTEGWITSADEVERVAVCAQGLKISVQLRHPLAAAEQAGQEVPSCCTDNLTLASPVRLPPLAPVPQREIPAAWVDALADAMGQGLPLYRATHAVHSCLLLRAGRILYRCEDLGRHNALDKAVGCALTEGVPLAECVLFTSGRVPVDMVRKAIRAGVPALVSKSMPTVQSLELAEEYGLKLFIRQKK
>NZ_CP022479.1|WP_005931937.1|2935170_2937162_-|glycerophosphodiester-phosphodiesterase
MTEPYPSTEVESKLKHLFRSLTRAHRAYKDTRNHALTLLHRASAAVLTAVLVYKALTYLLFLPAMNGIWSLTLRCSPVNYLTNNNAHQIFTSPTILGGIVLIVLLAACWNLYGFSILLHGFALARRGEPLRPVSLFVRSLGDIRHVLLPKNWLILLYCALLIPFTDVFVTYNYISQLAVPEYILGLVRAKPLYLVLFLLILGAAFLFTLLWVLVLPLFTLERKNLWDAVQESAAHVKTQLPRLAGVLLRWNLSALIRSVLVFFGASLLVYSVAALIGLRSTRAMLLLARALYLLEIPFFGFLLDCKVTTAQCTIIAFLYDCCRDCPPEALPEGKPHRFGGWPLLTAAVAGVTLVTGLMAVYLYALPQDDALLTAVGGVTPLVTFHRGDCTVAPENTLPAFRSAILKGGDRIELDVQMTSDGVVVVTHDSNLKRCTGKNAKVYDLTYAEVAQLDAGRWFSSRFADTRIPTLEQVLQLCRGRIGLNVEIKPSAATPALEAETVRLLREYGFDSSNCVITSQSYETLHKVKTLAPEYPTGYILALGVGNYYDLPDADFFSVETTFITSGMVNAVHLRGKTVSAWTIDREKVATHMLELGVDDLITDKPDMVQDLLARNQQVDDSLIDFRDLLNALLHPEQPADSSDDAEETITDAVEDPEEFVDAA
>NZ_CP022479.1|WP_005931939.1|2934236_2935067_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MAAKTVLNYLPRESVIHKMTGTTKLAFFLLFTFASMITYNTWVLLGLLVVSLLAFRLSRIKFREVRFMMTFMLVFLLLNNLFIFLFDPNQGTTLYGTRTVLCHLFWRYDLTAEQLFYMVNISLKYFVALPVAILFISATDPSEFAASLNSIGISYKVGYSVAIALRYIPDIQRDYHSISQAQQARGVELGKKEPFFKRMKNSVNILLPLILTSLNRIDTISNAMELRGFGKNSKRTWYTQRPFARRDFIALGVGAALLLISLTVTIRFGRFYNPFL
>NZ_CP022479.1|WP_005931941.1|2932525_2934247_+|ABC-transporter-ATP-binding-protein
MAERKPIISFRNFSFQYRAQKRPTLTDIDLEIYPGERVLIAGPSGSGKSTLAGCINGLNPFSNPGACTGTLTVDGVDAPHSSLFELSAHVGTVLQDPDGQFIGLTVGEDIAFALENSCTPQDEMHAITRHAAELVGIENHLGYAPHELSGGQKQRVSLAGVMVDQVRILLFDEPLANLDPATGKQAIELIDEIQKKTDTTVLIIEHRLEDVLWRNVDRIVLVNGGTILADLRPDELLSGSLLAENGIREPLYVTALRYAGVDITPDKHPAHVDSLVLDDTDTQKLRDWFTARPRPTAQPEREPLLEVKGLSFGYQKGQQTLRDVSFSIGKGEMVSIVGRNGAGKSTLSKLICGFETPDAGEIFLNGKPLAEENIRRRAQHIGYVMQNPNQMISKTMIYDEVALGLQRSGLTEAQIREKVEATLRVCGLYPFRNWPISALSFGQKKRVTIASVLVLDPELILLDEPTAGQDFRHYTDIMEFLRGLNARGVTVVMITHDMHLMLEYTRRALVFCDGRLIADRTAAAVLCDPVLVEQAALKETSLYTLANRCGIAPAQEFVERFIEQDREVREGGR
>NZ_CP022479.1|WP_005931943.1|2931885_2932440_+|ECF-type-riboflavin-transporter-substrate-binding-protein
MKNNNSSIKPVVAVGIGAALFFVLGRFVAIPSPVPNTNISLQYAVLALLAAMYGPVAGGLIGFIGHTLIDLSWGGSPWWSWVIASAFVGVVVGLFSKKLNLQEGEFSKKQVAFFALANIVAHLLAWILVAPVLDIAIYAEPVKKVFAQGAFAAVSNSITAVVVGGLLVLAYTRTIAKKGSLDQE
>NZ_CP022479.1|WP_099357358.1|2931430_2931658_+|hypothetical-protein
MKMPANFAAIDENEMVYLQGGATTEATAWDVFLNVGKLFNYIARVFSAGSSIVNNINVIVTTFQTLSTFSLTAKN
>NZ_CP022479.1|WP_035393769.1|2930028_2930949_-|MoxR-family-ATPase
MSDLMETLRQEGISPDLLRAVEDYRAAHALPEALRPRIPASGFTYYGREVWEQALAALLCGENLLLAGGKATGKNVLAENLAAAFGRPAWDISFHVNMDAASLIGMDTFVDGAVTFRPGPVYRCAQCGGFGVLDEINMAKNEALAVLHAVLDFRRAIDVPGYERIPLAEETRFIATMNYGYAGTRELNEALTSRFAVIQMPTITEENLEKLLRAQFADLTDKYVHQFALLFLDLQKKCDSAEISTKALDLRGMLDALRLMRRGVAAGPALDMGITNKAFDSYEQGLIRDVIAARIPASLTAEKLFR
>NZ_CP022479.1|WP_005931955.1|2928274_2930029_-|hypothetical-protein
MDARSYTAEERRAANQVWAAAGAYGFEPLFLAHNTDGTIDFYMNCVVGLVHKYYGDDLLRDLFATWDGDLRESQLDDLTWLYLESAVYLLELPRRPVLSELRRAHADYFFGIQYKLSRQEWMAKNQLVYTMQADRWRTVQGRHPPVMTPYESRLAEALSPSQPPQPGQLKGELLGLFARFALFDGKIRHKVGLHLHLEGLLASLATKTLPTQMIKTDRLTVEHSGSVEAGGSGPTADKRLAHITLRQNAAEDRAYIESCFGRSLYPPERLRKAEQALCTGAHLGCRLWFASGVPSPEQAPTPEAKHLAEQAQLQADRNRAYYAKNRALHRSVVLRLTEQIRNCILVHQQPNARIARSGALDPERVWRAPLLNDSRVFRCAEEENQPSFTVDLLLDASASRLHCQEVIAAQGTILAQSLTACGIPVRVSSFCSLRGYTVLRVLKGFADKSLQGIDQYFASGWNRDGLALRAAGDLVSFDPGPAPRHLLILLTDASPNDSRRVPPSPEQPLGCDYGGSYGVDDAAAEVRTLRRKGLRVSAVFMGEDSSSHDAERIYGKNLARIRGMDQLARAAGRLIQNEIRELGD
>NZ_CP022479.1|WP_005931962.1|2927327_2928065_-|hypothetical-protein
MDASRYFEEMHRAMSAQKNNSSLLLTVKVQDLGGADAYLELRQSPNGRARVFYSTMGRRNLNFQLFRKGWQLCHNASGEMTGQFPTRAENLLDSADFSACIRDDTLDTGRTEIILRELRRAAGTSRSCLPQSAREGAMITVESFVGRGGEWNYWSTRAADCLPIAAILCWLGDFLAGTERRTLQSSPEAMALAARWQAELASPFAQPADCVQRPARTVSPSAPRRAAQQVQNPRWQSILAVLATV
>NZ_CP022479.1|WP_005931922.1|2939816_2941973_+|hypothetical-protein
MAETYGWAGKILRVNLTTGEITTQDDAKYHKYIGGMGMAYRIMYEEAPMELDPYDEKALVIFGVGPLTGAGVPCSGRMNVTFRSTWSKGHSIIDAHMGGHIGSMLKYAGYDGIVVSGISEKPVYLRIEDGEVSLEDASEIWGKGTFAANKWMVEQNGREFETASIGPAGENLVDYSTLNTSFGNSGGAGLGAAMGNKKLKGLAIRGTGSVKVADPKKVLELSNYMMGNLIGGNNNHNVPAQPQSWAEYSATSGKNRWSGAPGRMWKKAPGGPVDTGEQPYNDINKVALRCFKGYFDFGAPAAEYTVKNGGCSSCPIRCYTEYDVDPLADYDLPTHNSNTCMPVLYGTRVYPDGVHDFKYEGDGTMVINLAWSHAVDDMGLWDNYGNLNRDLLWILRMPREEATKYISEAEYDSLPWEWEKAGDPRWEVELIRRMAYGEGDLSVIAKGTLAMMEKFGLPKSWLDRDDGATNSNLIYNGFPNHHGPAEAWQVGMLYNLVYNRDCMIHEIVCETGSGAPYDVTKKVMEDFFGEGCYDKAKAYTPINENKAKLAAYCVNDKNFHDSATLCNWMWPMTQSPSKEREYHGDLDLQADFMTAVTGETYTQADLQEDGARITQMLRAMTAISFQQNCGSANLRQEHDAICDWVFDKDPDFKAFEEGTTKLDRADMEKAKDLFYDIFGWDRTTGVPTRETLEKYDLADMADDLEKRGIYAQNTAAAE
>NZ_CP022479.1|WP_005931919.1|2941999_2942917_+|hypothetical-protein
MLFGRRKPGYTTTVDSSVDPEQAVLDLQKAELAAKKKPKAEVFDIDAASETARRLKETGSSFDGSAAKTGEDVIAAVERETAELAAMQAAGAAPEAAETAQDEAAKPQLLDFLAGEPEAENDPFADQPTQTAPELPELTPAQELAGYIRSRSAAALITPHALLVSEVENADELLAQMPQDPQCEDIVVRAGAKDSYYYSNANMSDNYAMIAQLIEDKDLCVMFAEMVRFNARVYPSATPLKYFQRSPYGLAPEEIEQTWKTMQGRLEFADIEELTNNQNERFLFSTQYLTRRYAKAISDVDDFCD
>NZ_CP022479.1|WP_099357312.1|2943346_2944585_+|molybdopterin-molybdotransferase-MoeA
MKQPFCTPAQALRRVLDAAAALPVPATERVPLDDACGRIAARDLCARMDQPPFDRSPLDGYALHSADTAGAGEETPVTLPVVMKLYAGDAPAAVLPAGCAARIMTGAPLPPGADCVLMQELTDGGEEQVRIYAQLQPNANVVFRGEDIAAGAPIAAAGTVLTPAHIGVLAGQGIPDAEVFRPLTVGVLATGSELLEAGEAWAPGKIYDANGIQNAARLRQLGFAVERTHCSDDPEEIAARMQELLTRCDAVITSGGVSVGQKDYLPTVLEMLHAEPVFAGVAQKPGSPMIAAQVGEKLVFCLSGNPFAAAATLEQYAVPALLRAAGRREEDCIPVHTRGRLTTGFSKPSKGTRFLRARALGGLVEIPGEGNAEAHSSGSLSAMMGCNCLVELPAGSGPVAPGEEVEVLNFVQ
>NZ_CP022479.1|WP_005931907.1|2944574_2945093_+|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MYSEKKQALAAELSLKRPAVLAVSGAHNSGKTTLLEKLIPLLRARGLKVGVIKHDGHDFTPDVPGTDSFRLREAGAEGVAVFSGSRYLLTEEFRLNEQDLLALFERHGYDLVLMEGFKESGWPKIEVVRKAVSEEPVSFEPLAIVGDVPGADFALDEPAALADWIAAQMPAL
>NZ_CP022479.1|WP_005931904.1|2945111_2946131_+|molybdopterin-binding-protein
MKLIRTEDAAGQVLCHDITQIIPGEFKGARFKKGHIIQPEDIPVLLSIGKENLYVWEKKPGILHEDEAAALLYKAAAGQNIHGTEPREGKIELIADCDGLLKIDRRALLAVNSTPQMMIATIHGDLPVKKGAKLAGTRIIPLVIEQEKMEAMQAAAGPKPILNVLPFHQKKFAVITTGSEVFKGRIEDKFTPILEQKLAVYGCEMAFHKVCDDDPAGITAAILEAKAAGCELIFTTGGMSVDPDDRTPLAIRNTGAEIITYGAPVLPGAMFLVSYLDGVPVCGLPGCVMYAKRTIFDLLLPRLLADDPITAEDIARLGEGGLCLGCAECHWPNCGFGHC
>NZ_CP022479.1|WP_005931901.1|2946202_2946700_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSENNLTHFDAAGNAVMVDVSEKPVTAREATAHGIITMNADAFAAVESGTVKKGDVLGVARVAGIMATKRTSELIPLCHPLPLTKVQIEFDLLPERRAVEARCTVKTSGVTGVEMEALTGVSTALLTIYDMCKAVDKGMELGEIHLVEKTGGKSGHYIRAEGGYV
>NZ_CP022479.1|WP_005931898.1|2946692_2947673_+|GTP-3',8-cyclase-MoaA
MFDSKGRKIHYLRLSVTDLCNLRCRYCMPDGVDKLEREDILTYEEFLRLAALFARCGVDTVRVTGGEPLVRKGVEQLVKGLKAIPGIRKVTMTTNAVLLEQQLPALLEAGLDSVNISLDTLDPALFAKITARDEFAAVQAGIHAALESGIPVKLNCVPQVGVNEGELEALAALAQDKPLQVRFIEMMPIGYGAAMPCISGPELLARFRRRWPELAPLPGAACAALGDGPAVYYTVPGWKGDIGFIAAVHGKFCASCNRVRLTSQGFLRPCLASEAGCDLKALLRSGASDEELLTAIRTTIWEKPQEHHFELKQDIPATRGMYRIGG
>NZ_CP022479.1|WP_005931895.1|2947677_2948610_+|MOSC-domain-containing-protein
MGKLLAICTSPQRGTVKTEVESARLTPEWGIETDAHGGNWHRQVSMLSAEKIENFRKKIWVDYGAFGENLVVEGYDFRNLPVTSRFAIGDVVLEMTQIGKECHNDCVIKQKTGECIMPREGVFARVLQGGEIHVGDEVTLLPPPENPPLRAAVITLSDKGSRGEREDKSGPLIVEMLTAAGYQVEETMILPDEAKALKAQLIRLADGRQVNLILTTGGTGFAPRDITPEATYAVADRNAPGIAEAMRYHSLSITPRGMLSRAVSVLRGKTLIVNLPGSPKAVKENLEYILPSLEHGVRIAAGLDGECARK
>NZ_CP022479.1|WP_005931892.1|2948698_2949586_+|molybdate-ABC-transporter-substrate-binding-protein
MKTMISRRGFLCAAGIASASAVLTACGGSSSSTASSTASSAAASSEAASGESVELIVFAAASLTETLSAIAETYSAENPGVTFSFNFDSSGTLKTQIQEGADCDLFISAGQKQMNQLDSTASAEGNTEGLDFVDAESRVDLLENKVVLCVPEGSNKGIDSFDSLAEHLKAEDILFCMGNSDVPVGQYTQKILAYYDLDEAALAAAGVITYGSNVKEVTTQVSEASVDAGVVYCTDAYSAGLTPVDEATKEMCGQVIYPAAVMKNALHAEAAKEFLAYLRTDKAATVFESVGFTAL
>NZ_CP022479.1|WP_005931889.1|2949606_2950281_+|molybdate-ABC-transporter-permease-subunit
MDWYPLWNSLRIALISCAAVFFLGIFAAYYIAKLPRVLKGVLDVVLTLPMVLPPTVVGYFLLLLFGAKRPLGIFFMEHFGVKLVMNWYSAIFASIVVAFPLMYRTARGAFESFDETLAWSAQTLGLSNTWIFWRVRMPCCRQGILAGTVLAFARALGEYGATSMIAGYTPGKTATIATTVYQLWRTNDEAGAMQWVLVDIVISAVVLLAVNLLERRQKQGGKHT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

721971 : 729908

Prochlorococcus_phage(33.33%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005932199.1\|721971_723153_-	phosphoribosylaminoimidazolecarboxamide formyltransferase	Q58MG4	Prochlorococcus_phage	8.3e-12	50.0
WP_035393990.1\|723177_723978_-	inosine monophosphate cyclohydrolase	NA	NA	NA	NA
WP_005932195.1\|724100_724697_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-23	33.5
WP_005932193.1\|724690_725737_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.3e-64	42.5
WP_097770595.1\|725741_727220_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-57	32.8
WP_005932189.1\|727229_727730_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	4.3e-18	39.6
WP_005932182.1\|728200_728683_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_035393988.1\|728894_729908_+	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.3e-18	30.3

DBSCAN-SWA_2

759199 : 836008

Faecalibacterium_phage(88.24%)

lysis,integrase,capsid,transposase,portal,terminase,tRNA,tail

attL 767194:767210|attR 845061:845077

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005933436.1\|759199_759661_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_005933432.1\|759664_761968_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	8.9e-10	35.1
WP_005933430.1\|761972_764114_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.4e-70	34.4
WP_099357223.1\|764110_765466_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_005933423.1\|765475_767071_-	hypothetical protein	NA	NA	NA	NA
767194:767210	attL	NA	NA	NA	NA
WP_005933420.1\|767246_768545_-	hypothetical protein	NA	NA	NA	NA
WP_005933418.1\|768541_769444_-	TIGR00159 family protein	NA	NA	NA	NA
WP_097786443.1\|769460_770627_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_005933408.1\|770799_772482_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	7.0e-113	41.9
WP_005933402.1\|772804_774346_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_005933400.1\|774456_774729_+	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	1.2e-06	38.3
WP_005933396.1\|774901_775354_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_005933394.1\|775343_776687_+	MATE family efflux transporter	NA	NA	NA	NA
WP_005933392.1\|776743_777676_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_005933389.1\|777764_779873_-	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_005933386.1\|779878_780418_-	adenine phosphoribosyltransferase	A0A1X9I6E2	Streptococcus_phage	3.7e-07	35.0
WP_005933383.1\|780463_780796_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_005933380.1\|780894_783555_-\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	3.0e-57	30.4
WP_005933375.1\|784023_784737_-	hypothetical protein	NA	NA	NA	NA
WP_005933373.1\|784832_785783_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_050762791.1\|785845_786472_-	hypothetical protein	NA	NA	NA	NA
WP_005933369.1\|786619_787639_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_005933364.1\|787860_788904_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.6e-200	100.0
WP_005933361.1\|788966_789227_-	helix-turn-helix transcriptional regulator	A0A2K9V2V5	Faecalibacterium_phage	5.1e-39	100.0
WP_005933357.1\|789593_789869_-	helix-turn-helix domain-containing protein	A0A2K9V2T3	Faecalibacterium_phage	4.1e-39	98.8
WP_005933354.1\|789968_790607_+	hypothetical protein	A0A2K9V2T9	Faecalibacterium_phage	3.2e-119	100.0
WP_005933351.1\|790672_791200_-	hypothetical protein	A0A2K9V2T4	Faecalibacterium_phage	1.4e-72	100.0
WP_005933346.1\|791356_792940_-	N-acetylmuramoyl-L-alanine amidase	A0A2K9V2U2	Faecalibacterium_phage	2.5e-277	100.0
WP_005933344.1\|792951_793332_-	hypothetical protein	A0A2K9V2S7	Faecalibacterium_phage	2.6e-60	100.0
WP_005933341.1\|793344_793701_-	hypothetical protein	A0A2K9V2T8	Faecalibacterium_phage	6.3e-48	100.0
WP_005933338.1\|793679_794993_-	RNA-directed DNA polymerase	A0A2K9V2X0	Faecalibacterium_phage	1.9e-267	100.0
WP_005933335.1\|795252_795597_-	diversity-generating retroelement protein Avd	A0A2K9V2S3	Faecalibacterium_phage	1.4e-57	100.0
WP_005933332.1\|795668_796766_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A2K9V2U1	Faecalibacterium_phage	6.8e-218	100.0
WP_004220703.1\|796786_797155_-	hypothetical protein	A0A2K9V2Y2	Faecalibacterium_phage	1.7e-64	100.0
WP_004220701.1\|797158_797584_-	hypothetical protein	A0A2K9V2S0	Faecalibacterium_phage	4.4e-72	100.0
WP_004220698.1\|797604_797916_-	hypothetical protein	A0A2K9V2T1	Faecalibacterium_phage	1.3e-52	100.0
WP_004220696.1\|797935_798841_-\|tail	tail protein	H7BVY9	unidentified_phage	1.8e-131	100.0
WP_005933326.1\|798855_800202_-\|integrase	integrase	A0A2K9V2T0	Faecalibacterium_phage	7.2e-254	100.0
WP_004220685.1\|800198_800480_-	hypothetical protein	A0A2K9V2R9	Faecalibacterium_phage	7.9e-46	100.0
WP_005933319.1\|800492_801170_-	hypothetical protein	A0A2K9V2T2	Faecalibacterium_phage	2.8e-105	100.0
WP_005933317.1\|801191_801542_-	hypothetical protein	A0A2K9V2W0	Faecalibacterium_phage	2.9e-61	100.0
WP_005933314.1\|801541_802459_-	phage late control D family protein	A0A2K9V2R4	Faecalibacterium_phage	1.3e-177	100.0
WP_005933311.1\|802455_802704_-	membrane protein	A0A2K9V2S8	Faecalibacterium_phage	4.0e-41	100.0
WP_005933306.1\|802696_806488_-\|tail	phage tail tape measure protein	A0A2K9V2X9	Faecalibacterium_phage	0.0e+00	100.0
WP_005933302.1\|806605_807013_-	hypothetical protein	A0A2K9V2R5	Faecalibacterium_phage	3.1e-67	100.0
WP_099357224.1\|807088_807598_-	protoporphyrinogen oxidase	A0A2K9V2S2	Faecalibacterium_phage	1.1e-90	100.0
WP_005933293.1\|807612_809082_-\|tail	phage tail sheath family protein	A0A2K9V2R6	Faecalibacterium_phage	4.9e-288	100.0
WP_005933290.1\|809095_809725_-	hypothetical protein	A0A2K9V2S4	Faecalibacterium_phage	1.5e-124	100.0
WP_005933288.1\|809740_810067_-	hypothetical protein	A0A2K9V2R1	Faecalibacterium_phage	4.5e-53	100.0
WP_005933285.1\|810071_810398_-	hypothetical protein	A0A2K9V2R7	Faecalibacterium_phage	6.1e-50	100.0
WP_004220650.1\|810411_810816_-	hypothetical protein	A0A2K9V2V3	Faecalibacterium_phage	7.3e-69	100.0
WP_005933282.1\|810843_811920_-\|capsid	phage capsid protein	A0A2K9V2Q5	Faecalibacterium_phage	1.1e-209	100.0
WP_005933280.1\|811940_812348_-	hypothetical protein	A0A2K9V2R8	Faecalibacterium_phage	4.1e-67	100.0
WP_005933278.1\|812347_813598_-	peptidase	A0A2K9V2W3	Faecalibacterium_phage	1.6e-231	100.0
WP_005933276.1\|813602_815297_-\|portal	phage portal protein	A0A2K9V2Q1	Faecalibacterium_phage	0.0e+00	100.0
WP_004220635.1\|815405_815672_-	hypothetical protein	A0A2K9V2R2	Faecalibacterium_phage	8.0e-40	100.0
WP_005933268.1\|815684_817607_-\|terminase	phage terminase large subunit family protein	A0A2K9V2Q8	Faecalibacterium_phage	0.0e+00	100.0
WP_005933262.1\|817590_818169_-	protoporphyrinogen oxidase	A0A2K9V2Q9	Faecalibacterium_phage	2.0e-99	100.0
WP_035394186.1\|818493_819276_-	hypothetical protein	A0A2K9V316	Faecalibacterium_phage	1.1e-116	94.3
WP_005933255.1\|819467_819971_-	DUF1492 domain-containing protein	A0A2K9V2W5	Faecalibacterium_phage	1.5e-87	100.0
WP_005933251.1\|819994_821332_-	site-specific DNA-methyltransferase	A0A2K9V2W9	Faecalibacterium_phage	1.3e-263	100.0
WP_005933245.1\|821479_822043_-	hypothetical protein	A0A2K9V2X3	Faecalibacterium_phage	5.2e-73	100.0
WP_005933242.1\|822032_822395_-	hypothetical protein	A0A2K9V2V1	Faecalibacterium_phage	6.4e-64	100.0
WP_005933240.1\|822378_823020_-	hypothetical protein	A0A2K9V2W2	Faecalibacterium_phage	1.4e-127	100.0
WP_035394183.1\|823033_823264_-	hypothetical protein	A0A2K9V2Z4	Faecalibacterium_phage	1.8e-16	100.0
WP_005933234.1\|823256_824000_-	hypothetical protein	A0A2K9V2V2	Faecalibacterium_phage	7.0e-134	100.0
WP_005933231.1\|824013_824616_-	hypothetical protein	A0A2K9V2X8	Faecalibacterium_phage	4.4e-102	100.0
WP_004220597.1\|824620_824908_-	hypothetical protein	A0A2K9V309	Faecalibacterium_phage	4.3e-47	100.0
WP_005933226.1\|825412_825640_-	hypothetical protein	A0A2K9V2V9	Faecalibacterium_phage	1.5e-39	100.0
WP_005933224.1\|825636_826245_-	recombinase	A0A2K9V2V4	Faecalibacterium_phage	8.4e-117	100.0
WP_004220587.1\|826241_826781_-	hypothetical protein	A0A2K9V2W4	Faecalibacterium_phage	2.2e-100	100.0
WP_005933220.1\|826777_827287_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A2K9V2U7	Faecalibacterium_phage	1.7e-86	100.0
WP_005933219.1\|827283_828174_-	site-specific DNA-methyltransferase	A0A2K9V2V8	Faecalibacterium_phage	4.1e-173	100.0
WP_005933218.1\|828170_828854_-	hypothetical protein	A0A2K9V2Y3	Faecalibacterium_phage	6.1e-124	100.0
WP_005933215.1\|828850_829717_-	hypothetical protein	A0A2K9V2U5	Faecalibacterium_phage	1.5e-140	100.0
WP_005933212.1\|829803_830205_-	single-stranded DNA-binding protein	A0A2K9V2W1	Faecalibacterium_phage	3.2e-72	100.0
WP_005933208.1\|830197_831028_-	single-stranded DNA-binding protein	H7BVX9	unidentified_phage	1.2e-150	100.0
WP_035394178.1\|831039_831696_-	hypothetical protein	A0A2K9V2U0	Faecalibacterium_phage	6.2e-118	100.0
WP_005933201.1\|831667_831919_-	hypothetical protein	A0A2K9V2U9	Faecalibacterium_phage	3.3e-35	100.0
WP_005933198.1\|831915_832671_-	hypothetical protein	A0A2K9V2U3	Faecalibacterium_phage	7.9e-141	100.0
WP_005933195.1\|832676_833411_-	3'-5' exonuclease	A0A2K9V2V7	Faecalibacterium_phage	4.8e-135	100.0
WP_005933194.1\|833403_834774_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A2K9V2T7	Faecalibacterium_phage	7.6e-251	100.0
WP_005933192.1\|834852_835668_-	hypothetical protein	A0A2K9V2U8	Faecalibacterium_phage	7.7e-158	100.0
WP_005933190.1\|835687_836008_-	helix-turn-helix domain-containing protein	A0A2K9V2Y0	Faecalibacterium_phage	6.9e-54	100.0
845061:845077	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1355777 : 1364190

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005929771.1\|1355777_1356881_-	hypothetical protein	A0A0P0IKU8	Acinetobacter_phage	6.3e-30	27.7
WP_005929775.1\|1357040_1358192_-	ATP-binding protein	NA	NA	NA	NA
WP_007890379.1\|1358331_1358820_+	hypothetical protein	NA	NA	NA	NA
WP_005929781.1\|1358797_1359088_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005929785.1\|1359306_1359567_-	hypothetical protein	NA	NA	NA	NA
WP_005929788.1\|1359563_1360295_-	ImmA/IrrE family metallo-endopeptidase	A0A1X9I6C7	Streptococcus_phage	1.0e-12	28.2
WP_002576370.1\|1360291_1360552_-	hypothetical protein	NA	NA	NA	NA
WP_005929791.1\|1360633_1361869_-	DNA polymerase IV	M1Q231	Streptococcus_phage	2.7e-29	26.8
WP_005929794.1\|1362007_1362487_+	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	1.6e-06	50.8
WP_035393362.1\|1362535_1363045_+	ImmA/IrrE family metallo-endopeptidase	Q0H245	Geobacillus_phage	2.0e-15	38.6
WP_007890377.1\|1363200_1364190_-	choloylglycine hydrolase family protein	M1HVK5	Paramecium_bursaria_Chlorella_virus	1.2e-16	29.5

DBSCAN-SWA_4

1648582 : 1655772

Bacillus_phage(50.0%)

integrase

attL 1643035:1643048|attR 1657458:1657471

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1643035:1643048	attL	NA	NA	NA	NA
WP_015542399.1\|1648582_1648936_-	helix-turn-helix transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.8e-15	41.8
WP_015542398.1\|1649096_1649300_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005928637.1\|1649277_1649943_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.5e-31	33.9
WP_005928640.1\|1650026_1650947_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	7.8e-42	45.0
WP_005928643.1\|1650939_1651746_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005928646.1\|1651763_1652678_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.3e-17	30.7
WP_005928648.1\|1653141_1653564_+	RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	1.9e-14	35.0
WP_005928652.1\|1653560_1653812_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007883125.1\|1653995_1654205_-	hypothetical protein	NA	NA	NA	NA
WP_005928655.1\|1654227_1654464_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005928658.1\|1654467_1655772_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0T6A8	Bacillus_phage	2.5e-17	25.1
1657458:1657471	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2786334 : 2795180

Clostridium_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005930681.1\|2786334_2788209_-	DUF4368 domain-containing protein	A0A0U4IB69	Exiguobacterium_phage	3.0e-16	22.7
WP_005930677.1\|2788232_2788541_-	hypothetical protein	NA	NA	NA	NA
WP_082210773.1\|2788537_2789014_-	PcfB family protein	NA	NA	NA	NA
WP_005930670.1\|2789116_2789542_-	hypothetical protein	NA	NA	NA	NA
WP_035393618.1\|2789607_2790642_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_005930664.1\|2790598_2791432_-	ParA family protein	V5UP47	Mycobacterium_phage	1.3e-19	27.3
WP_005930660.1\|2791431_2792301_-	replication initiator protein A	Q708R2	Streptococcus_phage	1.2e-07	32.1
WP_005930658.1\|2792797_2793034_+	hypothetical protein	A0A2K9V412	Faecalibacterium_phage	3.5e-31	85.3
WP_035393615.1\|2793252_2794008_+	hypothetical protein	B6SBZ5	Clostridium_virus	1.5e-27	34.6
WP_035393613.1\|2794037_2795180_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	1.8e-133	62.4

DBSCAN-SWA_6

2801839 : 2815103

Staphylococcus_phage(16.67%)

integrase

attL 2802407:2802466|attR 2805197:2805859

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157774498.1\|2801839_2803048_+	hypothetical protein	A0A2H4PQP5	Staphylococcus_phage	2.0e-24	37.2
2802407:2802466	attL	NA	NA	NA	NA
WP_005930624.1\|2803161_2804145_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.8e-36	30.8
WP_005930620.1\|2804153_2804618_+	putative toxin-antitoxin system, toxin component	NA	NA	NA	NA
WP_157747392.1\|2804614_2805223_-	hypothetical protein	E3T4D5	Cafeteria_roenbergensis_virus	1.3e-05	26.8
WP_099357354.1\|2805316_2805979_+	DNA-binding protein	NA	NA	NA	NA
2805197:2805859	attR	NA	NA	NA	NA
WP_099357302.1\|2806008_2809083_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	9.0e-66	26.5
WP_035393607.1\|2809182_2809722_+	hypothetical protein	NA	NA	NA	NA
WP_005930601.1\|2809709_2810249_+	hypothetical protein	NA	NA	NA	NA
WP_005930598.1\|2810267_2811749_+	recombinase family protein	A0A2K9V2Y5	Faecalibacterium_phage	4.0e-88	38.9
WP_005930594.1\|2812019_2815103_-	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	3.8e-133	32.9

DBSCAN-SWA_7

3006850 : 3046102

Faecalibacterium_phage(97.92%)

plate,integrase,transposase,terminase,tail,head

attL 3009614:3009632|attR 3042326:3042344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035395010.1\|3006850_3007690_+	DegV family protein	A0A1X9I5J4	Streptococcus_phage	1.5e-47	36.6
WP_005936366.1\|3007842_3009372_+	cardiolipin synthase	NA	NA	NA	NA
3009614:3009632	attL	NA	NA	NA	NA
WP_099357359.1\|3010485_3010677_-	transcription factor	A0A2K9VH42	Faecalibacterium_phage	1.1e-25	100.0
WP_005936353.1\|3010681_3012406_-	hypothetical protein	A0A2K9VH60	Faecalibacterium_phage	0.0e+00	100.0
WP_005936350.1\|3012449_3013703_-	RNA-directed DNA polymerase	A0A2K9VH35	Faecalibacterium_phage	4.0e-238	100.0
WP_005936347.1\|3014061_3014421_-	four helix bundle protein	A0A2K9VGX0	Faecalibacterium_phage	9.4e-60	100.0
WP_005936344.1\|3014386_3014704_-	hypothetical protein	A0A2K9VH74	Faecalibacterium_phage	3.6e-55	100.0
WP_005936342.1\|3014696_3015008_-	hypothetical protein	A0A2K9VGY9	Faecalibacterium_phage	1.2e-50	100.0
WP_005936339.1\|3014994_3015324_-	hypothetical protein	A0A2K9VGY5	Faecalibacterium_phage	2.2e-55	100.0
WP_005936332.1\|3016182_3017313_-\|plate	baseplate J protein	A0A2K9VGW9	Faecalibacterium_phage	1.9e-202	100.0
WP_005936329.1\|3017309_3017720_-	hypothetical protein	A0A2K9VH11	Faecalibacterium_phage	6.1e-71	100.0
WP_099357323.1\|3017716_3018076_-	carbamoyl-phosphate synthase subunit L	A0A2K9VH33	Faecalibacterium_phage	6.1e-59	100.0
WP_005936324.1\|3018097_3018853_-	hypothetical protein	A0A2K9VH51	Faecalibacterium_phage	1.2e-141	100.0
WP_005936321.1\|3018863_3019439_-	hypothetical protein	A0A2K9VH28	Faecalibacterium_phage	1.2e-96	100.0
WP_099357324.1\|3019453_3021841_-\|tail	phage tail tape measure protein	A0A2K9VGW0	Faecalibacterium_phage	0.0e+00	100.0
WP_005936312.1\|3021901_3022081_-	hypothetical protein	A0A2K9VH64	Faecalibacterium_phage	4.0e-27	100.0
WP_005936309.1\|3022113_3022470_-	hypothetical protein	A0A2K9VGY3	Faecalibacterium_phage	2.7e-59	100.0
WP_005936306.1\|3022509_3022944_-	hypothetical protein	A0A2K9VGX6	Faecalibacterium_phage	9.3e-78	100.0
WP_005936303.1\|3022960_3024406_-	hypothetical protein	A0A2K9VH53	Faecalibacterium_phage	4.1e-271	100.0
WP_005936300.1\|3024405_3024633_-	hypothetical protein	A0A2K9VGV9	Faecalibacterium_phage	7.8e-36	100.0
WP_005936297.1\|3024646_3025144_-	hypothetical protein	A0A2K9VH02	Faecalibacterium_phage	3.9e-88	100.0
WP_035395047.1\|3025148_3025640_-	phage morphogeneis protein	A0A2K9VH22	Faecalibacterium_phage	8.9e-85	100.0
WP_005936290.1\|3026132_3027017_-\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.0e-168	100.0
WP_005936287.1\|3027040_3027490_-	hypothetical protein	A0A2K9VGV3	Faecalibacterium_phage	1.0e-74	100.0
WP_035395005.1\|3027494_3028520_-	hypothetical protein	A0A2K9VH54	Faecalibacterium_phage	9.6e-190	100.0
WP_005936283.1\|3028655_3029396_-	hypothetical protein	A0A2K9VGX3	Faecalibacterium_phage	2.4e-142	100.0
WP_005936279.1\|3029388_3030951_-	DUF935 domain-containing protein	A0A2K9VGW6	Faecalibacterium_phage	3.3e-298	100.0
WP_097772095.1\|3030947_3031613_-	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	1.1e-125	100.0
WP_005936275.1\|3031626_3033402_-\|terminase	phage terminase large subunit	A0A2K9VGU9	Faecalibacterium_phage	0.0e+00	100.0
WP_005936273.1\|3033388_3033961_-	DUF3486 family protein	A0A2K9VGZ5	Faecalibacterium_phage	1.6e-90	100.0
WP_005936271.1\|3033953_3034277_-	hypothetical protein	A0A2K9VH10	Faecalibacterium_phage	2.2e-52	100.0
WP_005936268.1\|3034281_3034572_-	membrane protein	A0A2K9VH32	Faecalibacterium_phage	2.6e-44	100.0
WP_050762823.1\|3034584_3035067_-	hypothetical protein	A0A2K9VH08	Faecalibacterium_phage	2.5e-76	100.0
WP_005936263.1\|3035185_3035515_-	hypothetical protein	A0A2K9VGU3	Faecalibacterium_phage	3.3e-59	100.0
WP_099357360.1\|3035533_3036397_-	glucosaminidase domain-containing protein	A0A2K9VH44	Faecalibacterium_phage	1.8e-149	100.0
WP_005936257.1\|3036923_3037298_-	hypothetical protein	A0A2K9VGW4	Faecalibacterium_phage	3.3e-63	100.0
WP_005936253.1\|3037297_3037660_-	hypothetical protein	A0A2K9VGV8	Faecalibacterium_phage	4.7e-59	100.0
WP_005936250.1\|3037656_3038106_-	regulatory protein GemA	A0A2K9VH31	Faecalibacterium_phage	1.1e-78	100.0
WP_005936248.1\|3038123_3038645_-	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	1.1e-88	100.0
WP_005936246.1\|3038682_3038877_-	hypothetical protein	A0A2K9VGY1	Faecalibacterium_phage	3.3e-27	100.0
WP_005936243.1\|3038892_3039873_-	AAA family ATPase	A0A2K9VH00	Faecalibacterium_phage	2.0e-181	100.0
WP_035395041.1\|3039888_3041949_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2K9VH21	Faecalibacterium_phage	0.0e+00	100.0
WP_005936238.1\|3041986_3042211_-	helix-turn-helix transcriptional regulator	A0A2K9VGZ8	Faecalibacterium_phage	8.0e-33	100.0
WP_005936235.1\|3042242_3042638_-	hypothetical protein	A0A2K9VGT6	Faecalibacterium_phage	1.1e-61	100.0
3042326:3042344	attR	NA	NA	NA	NA
WP_005936231.1\|3042714_3042975_+	hypothetical protein	A0A2K9VH39	Faecalibacterium_phage	1.7e-39	100.0
WP_005936225.1\|3043247_3044462_-	hypothetical protein	A0A2K9VGU8	Faecalibacterium_phage	6.8e-235	100.0
WP_035395002.1\|3044542_3044767_-	hypothetical protein	A0A2K9VH23	Faecalibacterium_phage	9.7e-39	100.0
WP_005936217.1\|3045053_3045410_-	hypothetical protein	A0A2K9VGX2	Faecalibacterium_phage	2.0e-62	100.0
WP_005936213.1\|3045613_3046102_+	helix-turn-helix transcriptional regulator	A0A2K9VGZ7	Faecalibacterium_phage	5.5e-87	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022479

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection