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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024028 Chromobacterium violaceum strain CV1192 chromosome 1 crisprs WYL,csa3,cas3,DEDDh,DinG 0 1 5 0

Results visualization

1. NZ_CP024028
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024028_1 845268-845340 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024028_1 1.1|845293|23|NZ_CP024028|CRISPRCasFinder 845293-845315 23 NC_030944 Gordonia phage Demosthenes, complete genome 71070-71092 2 0.913
NZ_CP024028_1 1.1|845293|23|NZ_CP024028|CRISPRCasFinder 845293-845315 23 NC_041950 Gordonia phage Katyusha, complete genome 72339-72361 2 0.913
NZ_CP024028_1 1.1|845293|23|NZ_CP024028|CRISPRCasFinder 845293-845315 23 KU963262 Gordonia phage Benczkowski14, complete genome 72339-72361 2 0.913
NZ_CP024028_1 1.1|845293|23|NZ_CP024028|CRISPRCasFinder 845293-845315 23 KU998243 Gordonia phage Kvothe, complete genome 72443-72465 2 0.913

1. spacer 1.1|845293|23|NZ_CP024028|CRISPRCasFinder matches to NC_030944 (Gordonia phage Demosthenes, complete genome) position: , mismatch: 2, identity: 0.913

tggccaagaaggctcacaagtcc	CRISPR spacer
aggccaagaaggctcgcaagtcc	Protospacer
 **************.*******

2. spacer 1.1|845293|23|NZ_CP024028|CRISPRCasFinder matches to NC_041950 (Gordonia phage Katyusha, complete genome) position: , mismatch: 2, identity: 0.913

tggccaagaaggctcacaagtcc	CRISPR spacer
aggccaagaaggctcgcaagtcc	Protospacer
 **************.*******

3. spacer 1.1|845293|23|NZ_CP024028|CRISPRCasFinder matches to KU963262 (Gordonia phage Benczkowski14, complete genome) position: , mismatch: 2, identity: 0.913

tggccaagaaggctcacaagtcc	CRISPR spacer
aggccaagaaggctcgcaagtcc	Protospacer
 **************.*******

4. spacer 1.1|845293|23|NZ_CP024028|CRISPRCasFinder matches to KU998243 (Gordonia phage Kvothe, complete genome) position: , mismatch: 2, identity: 0.913

tggccaagaaggctcacaagtcc	CRISPR spacer
aggccaagaaggctcgcaagtcc	Protospacer
 **************.*******

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 325587 : 349685 32 Mannheimia_phage(29.41%) tRNA,tail,transposase,plate NA
DBSCAN-SWA_2 393536 : 461934 65 Burkholderia_phage(60.0%) plate,tail,protease NA
DBSCAN-SWA_3 1299554 : 1312119 13 uncultured_Mediterranean_phage(22.22%) tRNA NA
DBSCAN-SWA_4 3756395 : 3765417 10 Caulobacter_phage(16.67%) NA NA
DBSCAN-SWA_5 4009836 : 4015357 6 Enterobacteria_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage