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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024260 Escherichia coli strain F5656C1 chromosome, complete genome 11 crisprs c2c9_V-U4,WYL,RT,DEDDh,DinG,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas1,cas2 0 16 11 0
NZ_CP024261 Escherichia coli strain F5656C1 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024262 Escherichia coli strain F5656C1 plasmid unnamed2, complete sequence 0 crisprs RT 0 0 7 0

Results visualization

1. NZ_CP024260
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_1 480230-480353 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_2 1123045-1123136 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_3 1267218-1267301 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_4 1401829-1401973 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_5 1653947-1654043 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_6 1785206-1785350 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_7 1818539-1818682 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_8 3670543-3670794 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_9 4066047-4066727 Unclear I-E
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_10 4092619-4092891 TypeI-E I-E
4 spacers
cas2,cas1,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024260_11 4606852-4606969 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024260_2 2.1|1123071|40|NZ_CP024260|CRISPRCasFinder 1123071-1123110 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP024260_10 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT 4092831-4092862 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 1 0.969
NZ_CP024260_1 1.1|480273|38|NZ_CP024260|CRISPRCasFinder 480273-480310 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229407-229464 3 0.948
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239901-239958 3 0.948
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230813-230870 3 0.948
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211783-211840 3 0.948
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3605 3 0.906
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3598 3 0.906
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21074 3 0.906
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229205-229262 4 0.931
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239699-239756 4 0.931
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230611-230668 4 0.931
NZ_CP024260_7 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder 1818582-1818639 58 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211581-211638 4 0.931
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 KY653119 Morganella phage IME1369_02, complete genome 18217-18248 5 0.844
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 853777-853804 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 1901081-1901108 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 1904748-1904775 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 CP047139 Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence 66537-66564 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 1877471-1877498 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 82411-82438 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 86659-86686 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 80558-80585 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 110102-110129 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 86659-86686 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 82445-82472 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 110102-110129 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 83124-83151 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 83124-83151 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 102115-102142 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 110112-110139 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 110131-110158 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 110102-110129 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 102113-102140 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 82423-82450 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 82423-82450 7 0.75
NZ_CP024260_9 9.6|4066380|28|NZ_CP024260|PILER-CR 4066380-4066407 28 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 82421-82448 7 0.75
NZ_CP024260_10 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT 4092831-4092862 32 MK455769 Aeromonas phage MJG, complete genome 10369-10400 7 0.781
NZ_CP024260_9 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT 4066198-4066229 32 NC_041912 Aquamicrobium phage P14, complete genome 25099-25130 8 0.75
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 822257-822288 8 0.75
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 CP037991 Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence 265054-265085 8 0.75
NZ_CP024260_9 9.20|4066667|32|NZ_CP024260|CRISPRCasFinder 4066667-4066698 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP024260_10 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT 4092709-4092740 32 NZ_CP013415 Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence 218852-218883 8 0.75
NZ_CP024260_9 9.3|4066197|33|NZ_CP024260|PILER-CR 4066197-4066229 33 NC_041912 Aquamicrobium phage P14, complete genome 25098-25130 9 0.727
NZ_CP024260_9 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT 4066137-4066168 32 KU686197 Synechococcus phage S-CAM3 isolate 0808SB25, complete genome 123678-123709 9 0.719
NZ_CP024260_9 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT 4066137-4066168 32 KU686199 Synechococcus phage S-CAM3 isolate 1010CC42, complete genome 123684-123715 9 0.719
NZ_CP024260_9 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT 4066137-4066168 32 KU686198 Synechococcus phage S-CAM3 isolate 0910TB04, complete genome 123668-123699 9 0.719
NZ_CP024260_9 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT 4066198-4066229 32 NZ_CP011506 Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence 33839-33870 9 0.719
NZ_CP024260_9 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT 4066259-4066290 32 KC821604 Cellulophaga phage phiST, complete genome 62088-62119 9 0.719
NZ_CP024260_9 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT 4066259-4066290 32 KC821621 Cellulophaga phage phi19:2, complete genome 62096-62127 9 0.719
NZ_CP024260_9 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT 4066259-4066290 32 HQ634192 Cellulophaga phage phiST genomic sequence 16808-16839 9 0.719
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_021623 Borrelia hermsii strain HS1 plasmid lp174, complete sequence 4388-4419 9 0.719
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NZ_CP014350 Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence 4514-4545 9 0.719
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 MK250029 Prevotella phage Lak-C1, complete genome 109932-109963 9 0.719
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 MK250016 Prevotella phage Lak-A1, complete genome 149385-149416 9 0.719
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 MK250019 Prevotella phage Lak-A2, complete genome 72432-72463 9 0.719
NZ_CP024260_10 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT 4092709-4092740 32 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 208455-208486 9 0.719
NZ_CP024260_10 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT 4092831-4092862 32 NC_047954 Pseudomonas phage Njord, complete genome 11435-11466 9 0.719
NZ_CP024260_6 6.1|1785249|59|NZ_CP024260|CRISPRCasFinder 1785249-1785307 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
NZ_CP024260_9 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT 4066198-4066229 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 398736-398767 10 0.688
NZ_CP024260_9 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT 4066198-4066229 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2728156-2728187 10 0.688
NZ_CP024260_9 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT 4066259-4066290 32 KT997872 Uncultured Mediterranean phage uvDeep-CGR2-AD8-C175, complete genome 10204-10235 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NZ_CP041068 Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence 15222-15253 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 CP041516 Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence 38867-38898 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_019506 Clostridium phage phiCP13O, complete genome 20539-20570 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_019508 Clostridium phage phiCP34O, complete genome 20153-20184 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 JF767208 Clostridium phage phi13O, complete genome 20539-20570 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 GQ443085 Clostridium phage CP26F, complete genome 20369-20400 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 JF767210 Clostridium phage phi9O, complete genome 20774-20805 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 JF767209 Clostridium phage phi34O, complete genome 20153-20184 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_011318 Clostridium phage 39-O, complete genome 19873-19904 10 0.688
NZ_CP024260_9 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder 4066423-4066454 32 NC_019496 Clostridium phage phiCP26F, complete genome 20369-20400 10 0.688
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 MF158039 Shigella phage Sf12, complete genome 4975-5006 10 0.688
NZ_CP024260_9 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder 4066545-4066576 32 MF158042 Shigella phage Sd1, complete genome 938-969 10 0.688
NZ_CP024260_10 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT 4092709-4092740 32 NZ_CP041349 Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence 27173-27204 10 0.688
NZ_CP024260_10 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT 4092709-4092740 32 NZ_CP041350 Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence 149091-149122 10 0.688
NZ_CP024260_10 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT 4092709-4092740 32 NZ_CP004365 Komagataeibacter xylinus E25 plasmid pGX5, complete sequence 172655-172686 10 0.688
NZ_CP024260_10 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT 4092831-4092862 32 NC_047894 Pseudomonas phage uligo, complete genome 11353-11384 10 0.688
NZ_CP024260_6 6.1|1785249|59|NZ_CP024260|CRISPRCasFinder 1785249-1785307 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
NZ_CP024260_9 9.9|4066558|33|NZ_CP024260|PILER-CR 4066558-4066590 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
NZ_CP024260_9 9.23|4066544|33|NZ_CP024260|CRT 4066544-4066576 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667

1. spacer 2.1|1123071|40|NZ_CP024260|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

3. spacer 1.1|480273|38|NZ_CP024260|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

4. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

5. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

6. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

7. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 3, identity: 0.948

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttt	Protospacer
 .**************.*****************************************

8. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

9. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

10. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

11. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

12. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

13. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

14. spacer 7.1|1818582|58|NZ_CP024260|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 4, identity: 0.931

tgcgcgtcttatcaggtctacaaattcccgcgccatccgtaggccggataaggcgttt	CRISPR spacer
aacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttc	Protospacer
 .**************.****************************************.

15. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

16. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

17. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

18. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

19. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

20. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

21. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

22. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

23. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

24. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggtgggcgagtccgtgtttgcggg	Protospacer
******.***.************   . 

25. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

26. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

27. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

28. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

29. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

30. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

31. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

32. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

33. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

34. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

35. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

36. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

37. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

38. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

39. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

40. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

41. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

42. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

43. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

44. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

45. spacer 9.6|4066380|28|NZ_CP024260|PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcggcgggtgagtccgtgttttatac	CRISPR spacer
gcgcggcgggcgagcccgtgtttgccgg	Protospacer
**********.***.********  .. 

46. spacer 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   * 

47. spacer 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NC_041912 (Aquamicrobium phage P14, complete genome) position: , mismatch: 8, identity: 0.75

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
tcatcatgattcccgaggacgtgctgtccctg	Protospacer
  *********** ** ********* * * .

48. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 8, identity: 0.75

ccatgactataaaagcttatattttgataaat	CRISPR spacer
gcaggacaataaaagcttatatttggggatag	Protospacer
 ** *** **************** *. * * 

49. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccatga-ctataaaagcttatattttgataaat	CRISPR spacer
-aataatctataaaaccttatatttttatatta	Protospacer
  **.* ******** ********** ***   

50. spacer 9.20|4066667|32|NZ_CP024260|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **  

51. spacer 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

52. spacer 9.3|4066197|33|NZ_CP024260|PILER-CR matches to NC_041912 (Aquamicrobium phage P14, complete genome) position: , mismatch: 9, identity: 0.727

ggaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
ttcatcatgattcccgaggacgtgctgtccctg	Protospacer
   *********** ** ********* * * .

53. spacer 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

54. spacer 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

55. spacer 9.13|4066137|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 9, identity: 0.719

tcactgtatacccaactattggagatcatgta	CRISPR spacer
caactgtatacgaaactattggagacccagat	Protospacer
. *********  ************.*  *  

56. spacer 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NZ_CP011506 (Burkholderia pyrrocinia strain DSM 10685 plasmid p2327, complete sequence) position: , mismatch: 9, identity: 0.719

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
ctgtccggattccggacgttgtgctggcgccg	Protospacer
  .**  *********** .********** .

57. spacer 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KC821604 (Cellulophaga phage phiST, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

58. spacer 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KC821621 (Cellulophaga phage phi19:2, complete genome) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

59. spacer 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT matches to HQ634192 (Cellulophaga phage phiST genomic sequence) position: , mismatch: 9, identity: 0.719

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
catcaacaaaatattgatgatcaaaattcatt	Protospacer
*..*.    ***********.*** *******

60. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * **** 

61. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * **** 

62. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

63. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

64. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*  

65. spacer 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************    

66. spacer 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.    

67. spacer 6.1|1785249|59|NZ_CP024260|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

68. spacer 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gcgaggacattccggccgccgtgctggcgcgc	Protospacer
* .  .  ******* ** ************ 

69. spacer 9.14|4066198|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatcatgattccggacgacgtgctggcgcga	CRISPR spacer
gggcgatgattccggccgaggtgctggccatc	Protospacer
*... ********** *** ********    

70. spacer 9.15|4066259|32|NZ_CP024260|CRISPRCasFinder,CRT matches to KT997872 (Uncultured Mediterranean phage uvDeep-CGR2-AD8-C175, complete genome) position: , mismatch: 10, identity: 0.688

cgccgcattaatattgatgaccaatattcatt	CRISPR spacer
gttagcattaatattgttgtccaatataccag	Protospacer
  . ************ ** ******* *   

71. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** ********** 

72. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** ********** 

73. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_019506 (Clostridium phage phiCP13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

74. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_019508 (Clostridium phage phiCP34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

75. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to JF767208 (Clostridium phage phi13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

76. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to GQ443085 (Clostridium phage CP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

77. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to JF767210 (Clostridium phage phi9O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

78. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to JF767209 (Clostridium phage phi34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

79. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_011318 (Clostridium phage 39-O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

80. spacer 9.16|4066423|32|NZ_CP024260|CRISPRCasFinder matches to NC_019496 (Clostridium phage phiCP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************  

81. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   .. 

82. spacer 9.18|4066545|32|NZ_CP024260|CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   .. 

83. spacer 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*  

84. spacer 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*  

85. spacer 10.2|4092709|32|NZ_CP024260|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*  

86. spacer 10.4|4092831|32|NZ_CP024260|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .    

87. spacer 6.1|1785249|59|NZ_CP024260|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*  

88. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   .. 

89. spacer 9.9|4066558|33|NZ_CP024260|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   .. 

90. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   .. 

91. spacer 9.23|4066544|33|NZ_CP024260|CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 271 : 9712 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_2 571194 : 588931 16 Salmonella_phage(28.57%) transposase NA
DBSCAN-SWA_3 970080 : 1007843 46 Escherichia_phage(28.57%) integrase,portal,terminase,tail,holin,tRNA attL 978272:978286|attR 1007945:1007959
DBSCAN-SWA_4 1386901 : 1394747 7 Enterobacteria_phage(66.67%) lysis NA
DBSCAN-SWA_5 1598091 : 1650798 49 Enterobacteria_phage(47.83%) integrase,lysis,protease,transposase,tRNA attL 1587314:1587373|attR 1659247:1660014
DBSCAN-SWA_6 1880930 : 1891806 11 Vibrio_phage(33.33%) integrase attL 1878474:1878489|attR 1901220:1901235
DBSCAN-SWA_7 2322324 : 2336182 14 Enterobacteria_phage(66.67%) integrase,transposase attL 2321932:2321945|attR 2327236:2327249
DBSCAN-SWA_8 2421074 : 2488383 59 Stx2-converting_phage(18.75%) protease,integrase,tRNA,transposase attL 2432101:2432118|attR 2485082:2485099
DBSCAN-SWA_9 3854054 : 3862643 8 Stx2-converting_phage(42.86%) integrase,transposase attL 3851669:3851685|attR 3862847:3862863
DBSCAN-SWA_10 4100255 : 4108194 7 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_11 4484388 : 4531686 58 Enterobacteria_phage(81.58%) head,integrase,terminase,tail,capsid,transposase,holin,plate,tRNA attL 4490311:4490330|attR 4516486:4516505
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP024262
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 49544 50 Escherichia_phage(25.0%) transposase,protease NA
DBSCAN-SWA_2 52565 : 54074 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_3 57632 : 63850 8 Escherichia_phage(40.0%) transposase NA
DBSCAN-SWA_4 81235 : 84945 2 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_5 99604 : 102414 2 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_6 107936 : 108743 1 Macacine_betaherpesvirus(100.0%) integrase attL 105324:105339|attR 116815:116830
DBSCAN-SWA_7 116581 : 118894 3 Stx2-converting_phage(100.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage