CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP024291	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed2, complete sequence	0 crisprs	NA	0	9
NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	1 crisprs	NA	1	0
NZ_CP024289	Escherichia coli O178:H19 strain 2012C-4431 chromosome, complete genome	8 crisprs	cas3,DEDDh,c2c9_V-U4,DinG,WYL,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	14	11
NZ_CP024292	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 13487

Cronobacter_phage(25.0%)

integrase

attL 9852:9864|attR 15449:15461

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028985386.1\|356_1718_-	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_099528461.1\|1769_2000_-	hypothetical protein	NA	NA	NA	NA
WP_001027048.1\|2964_3156_-	hypothetical protein	NA	NA	NA	NA
WP_000271710.1\|3155_3575_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_137538285.1\|3621_3924_-	antirestriction protein	NA	NA	NA	NA
WP_113441034.1\|4012_4255_-	DUF1472 domain-containing protein	NA	NA	NA	NA
WP_099528463.1\|4462_5590_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001104895.1\|5603_5825_-	hypothetical protein	NA	NA	NA	NA
WP_099528464.1\|5825_6509_-	DNA methylase	A0A2I7RE86	Vibrio_phage	5.6e-29	38.2
WP_032236829.1\|6585_6891_-	hypothetical protein	NA	NA	NA	NA
WP_001134299.1\|6894_7821_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000618108.1\|8072_8321_+	DinI-like family protein	Q2A098	Sodalis_phage	4.1e-14	46.7
WP_028985391.1\|8317_8755_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	4.9e-26	48.4
WP_001365565.1\|8754_9747_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	8.0e-101	59.5
WP_001365560.1\|9776_10025_+	DUF4113 domain-containing protein	F1C5A5	Cronobacter_phage	1.5e-19	59.0
9852:9864	attL	NA	NA	NA	NA
WP_000340836.1\|10029_10422_-	hypothetical protein	NA	NA	NA	NA
WP_001103695.1\|10426_11398_-	hypothetical protein	A0A222YXF2	Escherichia_phage	1.3e-66	42.9
WP_028985392.1\|11626_12271_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	2.5e-39	43.5
WP_000239527.1\|12264_12540_+	hypothetical protein	NA	NA	NA	NA
WP_000016958.1\|12677_13487_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.2e-54	97.3
15449:15461	attR	NA	NA	NA	NA

DBSCAN-SWA_2

18621 : 19599

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001369978.1\|18621_19599_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	9.4e-102	64.5

DBSCAN-SWA_3

22694 : 24815

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072094473.1\|22694_24815_-	enterohemolysin T1SS ABC transporter permease/ATPase EhxB	W8CYL7	Bacillus_phage	9.3e-46	30.4

DBSCAN-SWA_4

44254 : 51031

Macacine_betaherpesvirus(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077746874.1\|44254_44719_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	5.3e-47	61.5
WP_000203483.1\|44834_45146_-	hypothetical protein	NA	NA	NA	NA
WP_000264906.1\|45173_45365_-	hypothetical protein	NA	NA	NA	NA
WP_028985519.1\|45374_45740_-	hypothetical protein	NA	NA	NA	NA
WP_062896385.1\|45873_46083_+	hypothetical protein	NA	NA	NA	NA
WP_047091594.1\|46245_50148_-\|protease	serine protease autotransporter EspP	Q9LA58	Enterobacterial_phage	1.7e-239	40.5
WP_099528467.1\|50644_51031_-	thermonuclease	A0A0R6PHV6	Moraxella_phage	1.9e-10	33.9

DBSCAN-SWA_5

54307 : 59008

Yersinia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157774584.1\|54307_55690_+	autoagglutinating adhesin Saa	A0A2C9CZB7	Yersinia_phage	1.8e-05	34.9
WP_028985399.1\|56920_59008_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	6.8e-09	32.2

DBSCAN-SWA_6

66822 : 67569

Xanthomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028985403.1\|66822_67569_-	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	2.1e-05	32.1

DBSCAN-SWA_7

95016 : 95238

Erwinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278980.1\|95016_95238_-	conjugal transfer protein TraR	A0A218M4I6	Erwinia_phage	4.4e-07	41.7

DBSCAN-SWA_8

103267 : 104089

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028985438.1\|103267_104089_-	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	2.7e-46	39.2

DBSCAN-SWA_9

107734 : 110570

Emiliania_huxleyi_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050864290.1\|107734_109693_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	5.1e-22	27.3
WP_000005988.1\|109757_109991_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_000290783.1\|110048_110570_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	1.3e-46	73.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024290

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024290_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024290_1

33610-33729

Orphan

Consensus_repeat	Method
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024290_1

>merge|NZ_CP024290|1|33610-33729|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

>NZ_CP024290|1|1|33610-33729|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CTGTAATTTTCATGAAAGGTGGATGGCTGCGCAC
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024290.1\|WP_053919822.1\|28206_28752_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_001074384.1\|35687_36134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_000220561.1\|32224_32506_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP024290.1\|WP_000121743.1\|32495_32747_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484
NZ_CP024290.1\|WP_001178641.1\|30737_31286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_000167280.1\|29077_29350_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_024133577.1\|29582_29762_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_000435064.1\|34841_35684_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP024290.1\|WP_001025387.1\|31359_31875_-\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|99751
NZ_CP024290.1\|WP_001446884.1\|30459_30672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_000866654.1\|29804_30134_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024290.1\|WP_000008708.1\|30227_30470_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274805
NZ_CP024290.1\|WP_001352874.1\|33981_34821_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444

Protein	Function_ID	Function_description	E-value
NZ_CP024290.1\|WP_001025387.1\|31359_31875_-\|J-domain-containing-protein	gnl\|CDD\|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	2.01289e-12
NZ_CP024290.1\|WP_000220561.1\|32224_32506_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	2.37215e-20
NZ_CP024290.1\|WP_000121743.1\|32495_32747_-\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08
NZ_CP024290.1\|WP_000435064.1\|34841_35684_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	6.74541e-13
NZ_CP024290.1\|WP_000008708.1\|30227_30470_-\|hypothetical-protein	gnl\|CDD\|274805	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family. This model describes a family of predicted regulatory proteins with a conserved zinc finger/HTH architecture. The amino-terminal region contains a novel domain, featuring two CXXC motifs and occuring in a number of small bacterial proteins as well as in the present family. The carboxyl-terminal region consists of a helix-turn-helix domain, modeled by pfam01381. The predicted function is DNA binding and transcriptional regulation.	2.19388e-05
NZ_CP024290.1\|WP_001352874.1\|33981_34821_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	6.11873e-22

>NZ_CP024290.1|WP_000121743.1|32495_32747_-|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>NZ_CP024290.1|WP_000220561.1|32224_32506_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADMR
>NZ_CP024290.1|WP_001025387.1|31359_31875_-|J-domain-containing-protein
MNIQEALNIFGLSGDLTEKDIKAAYRKAALKYHPDRNPLGAELMKAVNAAFDFLMANIDKINQFQSTDENARYNYGEDLEKVLNTLSGLTGIVYEVIGNWVWISGETITHKETLKEIGCKWAAKKKQWFYRPEEHKSYWNREEHTIEEIRAKYGSTGQRRATGWQQVETRA
>NZ_CP024290.1|WP_001178641.1|30737_31286_-|hypothetical-protein
MQNDKFFERYQPVFEIVCRILGNGWRVNLLDDCQYRIKLTSPQYKNYSIHIRMEKGRLVIIGSVDSRSWRSPYHTCTVSPERNPVEIAADIEKKILTDAFENVEKAMEYERQLQKKREQTQILKGMLSRLIRLDSWHGTLTGFKVENGLDGNVSERGGGFEMVIRGLSVDQLIKVAGFIKQL
>NZ_CP024290.1|WP_001446884.1|30459_30672_-|hypothetical-protein
MSEDATRLFIELEKLMKVRSKEADKKTTKKVVFHKSFYYEEFCNVKDEIDDPILLQFYTDTIVKVLNHEF
>NZ_CP024290.1|WP_000008708.1|30227_30470_-|hypothetical-protein
MSFKPTPEEVKQARIKAGFTQQEAAKRFGFSLSAWQAKETSGKTSRGLAAGTYELLLLLADEHPDYQLVKREKNQNKETK
>NZ_CP024290.1|WP_000866654.1|29804_30134_-|hypothetical-protein
MKVLTFKNDTVSVGDVFVSSWGYEQTNVTFYQVLSVHGKKTVTVREIRANSEYTDSMVGFKTPVLNDFTGECFKRQIKDFGDELAIKIEDFETAYKTLPEEKHRFSSYY
>NZ_CP024290.1|WP_024133577.1|29582_29762_-|hypothetical-protein
MEREFSAKASLNRNIKFWLEQCGLSKERVIRCIDNWYDLAYPPSEQEKAKKEAIEKLIK
>NZ_CP024290.1|WP_000167280.1|29077_29350_-|hypothetical-protein
MTKSDFVSFVSGELRQGAVRFSLAFNSKGEIVLHWTNKAGIRVWRILSGNRGKKPSKANLERMSNFRRWLFDARQGMEGYTQQPEQSNLS
>NZ_CP024290.1|WP_053919822.1|28206_28752_-|hypothetical-protein
MKKVQFRIDENQHDDLLDCLKTLYPDEPALTVAKGMKLLANTLLKSKAGSKDMNTFFDNNDFIKTTMYLTGKQRADIERAANRHGWTLSRECRYRIQTTLENELDFFDQELLMMNRCRNSIDKIGRNFHYIIVNDQTRVLDKDGFYQDAERLTTEIFNLKNQFENYIMLCKGRTVSNKVEM
>NZ_CP024290.1|WP_001352874.1|33981_34821_+|replication-initiation-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTAQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVERVARRASKLRFSYKIDKESEGLDTRIPYGFRGA
>NZ_CP024290.1|WP_000435064.1|34841_35684_+|replication-initiation-protein
MEQIKLHKQGGAAVIIIPASMIENTGWEDGTLLEVLEINETLHIRRKTESGALATKACPSLFSSTMRHVNYDKIIRYNSGLNLLVNELSFSARRVFFICLYYYFENKLESDKSLLIRADKYAEFVGVERSVAYKQMKDAADFFSRNKNLITHCDYISNEGLLRVMFSSKTINYITAIDSRKYQVTELPLKSALSLQGRYSWPLYQLIKFSHLKSFTIGVDELKKEIGYIQNQKFSFFKRDGINIAIDEITERTDVKNIKCVNAERQGRRVSKVRFEIEMR
>NZ_CP024290.1|WP_001074384.1|35687_36134_+|hypothetical-protein
MAKIYQFPQGEERAKFRKEIARERKKRFAVKTGSTFVKWLGWGWFYLRLLAASVLHFIFVFVLAILGAFKWAVFWLGGILCVITWYHLDHQLWTPQNLTIPVITATWILGLLAEPLMELLNKTMPWHKLLVPEPADESTENSSEISQQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NZ_CP024290_1	1.1\|33653\|34\|NZ_CP024290\|CRISPRCasFinder	33653-33686	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

2. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

3. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

4. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

5. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

6. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

7. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

8. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

9. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

10. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

11. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

12. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

13. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

14. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

15. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

16. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

17. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

18. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

19. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

20. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

21. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

22. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

23. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

24. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

25. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

26. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

27. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

28. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

29. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

30. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

31. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

32. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

33. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

34. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

35. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

36. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

37. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

38. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

39. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

40. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

41. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

42. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

43. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

44. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

45. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

46. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

47. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

48. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

49. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

50. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

51. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

52. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

53. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

54. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

55. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

56. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

57. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

58. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

59. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

60. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

61. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

62. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

63. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

64. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

65. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

66. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

67. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

68. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

69. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

70. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

71. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

72. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

73. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

74. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

75. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

76. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

77. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

78. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

79. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

80. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

81. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

82. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

83. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

84. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

85. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

86. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

87. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

88. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

89. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

90. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

91. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

92. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

93. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

94. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

95. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

96. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

97. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

98. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

99. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

100. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

101. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

102. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

103. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

104. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

105. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

106. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

107. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

108. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

109. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

110. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

111. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

112. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

113. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

114. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

115. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

116. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

117. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

118. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

119. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

120. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

121. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

122. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

123. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

124. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

125. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

126. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

127. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

128. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

129. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

130. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

131. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

132. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

133. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

134. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

135. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

136. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

137. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

138. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

139. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

140. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

141. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

142. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

143. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

144. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

145. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

146. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

147. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

148. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

149. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

150. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

151. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

152. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

153. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

154. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

155. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

156. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

157. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

158. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

159. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

160. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

161. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

162. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

163. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

164. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

165. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

166. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

167. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtgattttcatgaaaggtggatggctgcgcac	Protospacer
****.*****************************

168. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

169. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

170. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

171. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

172. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

173. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

174. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

175. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

176. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

177. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

178. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

179. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

180. spacer 1.1|33653|34|NZ_CP024290|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgttcga	Protospacer
*****************************. *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP024289

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024289_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_1

1182618-1182741

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024289_1

>merge|NZ_CP024289|1|1182618-1182741|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP024289|1|1|1182618-1182741|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_001182363.1\|1188060_1189272_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP024289.1\|WP_000493947.1\|1185940_1186582_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP024289.1\|WP_000212657.1\|1182177_1182483_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP024289.1\|WP_001174942.1\|1184352_1185726_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP024289.1\|WP_000269501.1\|1189384_1190317_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP024289.1\|WP_000102278.1\|1191637_1191727_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP024289.1\|WP_000716922.1\|1180447_1182052_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP024289.1\|WP_000190982.1\|1190313_1191339_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP024289.1\|WP_001069997.1\|1178834_1179620_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP024289.1\|WP_001295403.1\|1172071_1173484_-\|pyruvate-kinase-I	unknown	unknown	gnl\|CDD\|181699
NZ_CP024289.1\|WP_000098911.1\|1186621_1187770_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP024289.1\|WP_000587560.1\|1179623_1180436_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP024289.1\|WP_000528342.1\|1174040_1174250_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP024289.1\|WP_001070230.1\|1174705_1175332_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP024289.1\|WP_001273517.1\|1175352_1177455_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP024289.1\|WP_000007283.1\|1193207_1193789_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP024289.1\|WP_001310861.1\|1178169_1178838_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP024289.1\|WP_000534291.1\|1183055_1184312_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP024289.1\|WP_000701040.1\|1191892_1193062_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP024289.1\|WP_096096082.1\|1177458_1178106_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_001182363.1\|1188060_1189272_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP024289.1\|WP_000493947.1\|1185940_1186582_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP024289.1\|WP_000212657.1\|1182177_1182483_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP024289.1\|WP_001174942.1\|1184352_1185726_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP024289.1\|WP_000269501.1\|1189384_1190317_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP024289.1\|WP_000716922.1\|1180447_1182052_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP024289.1\|WP_000190982.1\|1190313_1191339_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP024289.1\|WP_001069997.1\|1178834_1179620_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	5.33298e-163
NZ_CP024289.1\|WP_001295403.1\|1172071_1173484_-\|pyruvate-kinase-I	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP024289.1\|WP_000098911.1\|1186621_1187770_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP024289.1\|WP_000587560.1\|1179623_1180436_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	8.20825e-175
NZ_CP024289.1\|WP_000528342.1\|1174040_1174250_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP024289.1\|WP_001070230.1\|1174705_1175332_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP024289.1\|WP_001273517.1\|1175352_1177455_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP024289.1\|WP_000007283.1\|1193207_1193789_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP024289.1\|WP_001310861.1\|1178169_1178838_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	2.09652e-76
NZ_CP024289.1\|WP_000534291.1\|1183055_1184312_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP024289.1\|WP_000701040.1\|1191892_1193062_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP024289.1\|WP_096096082.1\|1177458_1178106_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.49191e-122

>NZ_CP024289.1|WP_000212657.1|1182177_1182483_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP024289.1|WP_000716922.1|1180447_1182052_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP024289.1|WP_000587560.1|1179623_1180436_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC
>NZ_CP024289.1|WP_001069997.1|1178834_1179620_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSVTDYGEKIYLYCKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP024289.1|WP_001310861.1|1178169_1178838_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP024289.1|WP_096096082.1|1177458_1178106_+|YdhW-family-putative-oxidoreductase-system-protein
MGEMNHRDEWPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSVAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP024289.1|WP_001273517.1|1175352_1177455_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_CP024289.1|WP_001070230.1|1174705_1175332_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP024289.1|WP_000528342.1|1174040_1174250_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP024289.1|WP_001295403.1|1172071_1173484_-|pyruvate-kinase-I
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP024289.1|WP_000534291.1|1183055_1184312_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP024289.1|WP_001174942.1|1184352_1185726_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>NZ_CP024289.1|WP_000493947.1|1185940_1186582_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP024289.1|WP_000098911.1|1186621_1187770_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP024289.1|WP_001182363.1|1188060_1189272_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP024289.1|WP_000269501.1|1189384_1190317_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP024289.1|WP_000190982.1|1190313_1191339_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP024289.1|WP_000102278.1|1191637_1191727_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP024289.1|WP_000701040.1|1191892_1193062_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP024289.1|WP_000007283.1|1193207_1193789_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_2

1792292-1792494

Orphan

Consensus_repeat	Method
TCTCCCCACTTTTACTCCCCACTTTTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP024289_2

>merge|NZ_CP024289|2|1792292-1792494|PILER-CR
TCCCCACTACTCCCCACTTTTGCTCCCCACTTTTTGAAATTACCCACCGTCTCCACACCTCTTTTTTTTGTGATTCTAACGTTATGTTTTTCAATATGTTTTTTACTCCCCACTTTTTTGGGTATATACAGGTGGGAAAGTGGGCAATTATGTTTCAATTTTGTTAAATTCCCCGCTCTCCCCACTTTTACTCCCCACTTTTT

>NZ_CP024289|2|1|1792292-1792494|PILER-CR
TCCCCACTACTCCCCACTTTTGCTCCCCACTTTTTG	AAATTACCCACCGTCTCCACACCTCTTTTTTTTGTGATTCTAACGTTATGTTTTTCAATATGTT
TTTTACTCCCCACTTTTTTGGGTATATACAGGTGGG	AAAGTGGGCAATTATGTTTCAATTTTGTTAAATTCCCCGCTCTCCCCACTTTTACTCC
CCACTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_028985837.1\|1788533_1788815_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_001297484.1\|1782410_1783517_+\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP024289.1\|WP_032307310.1\|1792039_1792291_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_001297479.1\|1783552_1784194_+\|high-frequency-lysogenization-protein-HflD	unknown	unknown	gnl\|CDD\|234690
NZ_CP024289.1\|WP_001403025.1\|1795842_1796148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_052904139.1\|1794652_1794892_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_001204973.1\|1794203_1794437_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000423729.1\|1784197_1785568_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP024289.1\|WP_000735412.1\|1786406_1787867_+\|two-component-system-sensor-histidine-kinase-PhoQ	unknown	unknown	gnl\|CDD\|182754
NZ_CP024289.1\|WP_001265481.1\|1785735_1786407_+\|two-component-system-response-regulator-PhoP	unknown	unknown	gnl\|CDD\|182755
NZ_CP024289.1\|WP_000609225.1\|1794881_1795094_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000103621.1\|1796653_1796833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000476089.1\|1781895_1782357_+\|phosphatase-NudJ	unknown	unknown	gnl\|CDD\|239647
NZ_CP024289.1\|WP_050867864.1\|1789072_1790962_-\|Clp-protease-ClpP	unknown	unknown	gnl\|CDD\|132927
NZ_CP024289.1\|WP_157774580.1\|1796205_1796433_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_157774579.1\|1795086_1795644_-\|host-cell-division-inhibitor-Icd-like-protein	unknown	unknown	gnl\|CDD\|371132
NZ_CP024289.1\|WP_000182306.1\|1796890_1797094_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_052904140.1\|1794438_1794660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000770163.1\|1793898_1794198_-\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
NZ_CP024289.1\|WP_032307311.1\|1791620_1792043_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_001297484.1\|1782410_1783517_+\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP024289.1\|WP_000476089.1\|1781895_1782357_+\|phosphatase-NudJ	gnl\|CDD\|239647	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	8.71517e-69
NZ_CP024289.1\|WP_050867864.1\|1789072_1790962_-\|Clp-protease-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	7.44721e-72
NZ_CP024289.1\|WP_001297479.1\|1783552_1784194_+\|high-frequency-lysogenization-protein-HflD	gnl\|CDD\|234690	PRK00218, PRK00218, lysogenization regulator HflD.	5.2566e-115
NZ_CP024289.1\|WP_157774579.1\|1795086_1795644_-\|host-cell-division-inhibitor-Icd-like-protein	gnl\|CDD\|371132	pfam10554, Phage_ASH, Ash protein family. This family was identified by Iyer and colleagues. It includes the Ash protein from bacteriophage P4.	7.34092e-07
NZ_CP024289.1\|WP_000770163.1\|1793898_1794198_-\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	1.79974e-21
NZ_CP024289.1\|WP_000423729.1\|1784197_1785568_+\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP024289.1\|WP_000735412.1\|1786406_1787867_+\|two-component-system-sensor-histidine-kinase-PhoQ	gnl\|CDD\|182754	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ.	0
NZ_CP024289.1\|WP_032307311.1\|1791620_1792043_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	1.9504e-24
NZ_CP024289.1\|WP_001265481.1\|1785735_1786407_+\|two-component-system-response-regulator-PhoP	gnl\|CDD\|182755	PRK10816, PRK10816, two-component system response regulator PhoP.	6.18954e-166

>NZ_CP024289.1|WP_032307310.1|1792039_1792291_-|hypothetical-protein
MNRKTRDKTAPKYKALDMTEHALKVAIRTIDRHAGEGYAKEHPDLISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVES
>NZ_CP024289.1|WP_032307311.1|1791620_1792043_-|single-stranded-DNA-binding-protein
MTAQIAAYGRLVDDPQVKQTSKGTPMTLVRMAVSLPCSQAQDGQATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGWQVIADSVISARTARPGGKKGQQGQATDALNRAKQQAGNDDPYGDNIPF
>NZ_CP024289.1|WP_050867864.1|1789072_1790962_-|Clp-protease-ClpP
MKTWFSIKAMADVVHVRIYDEIGGYGVKASALTDEINACGNASEIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGDHIVMPENAMMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFADEVIPAITAMARIESKRIGDFSNMPEKIKSMISQKTGSGEQERLNGIRELFGTFNGRYNDLAISCLADSECSVENARERLLLAMGKESTPTNKTTPANLYYAYTDNGNITGDAMRQGLNARLGHERAERGNPYAMMSLFDMAQASLTHRGISTGSYSTRSQIVNAAFTHSSSDFTDILAGGAEKSVLAGWEHSGETFRQWTKKGSLSNFREARRVGMNGFSTLNKVPEGAEYKYITTSDRGEPIALATYGNIFSITRQAIINDDLDQLSTVPMAMGRAASRTVGNLVNLVLTGNVKLSDGITLFDKKHSNLIEAGLTTPGLSAARHLMRTQKDKNGEVLNIAPKFLLVPAALEDRALQMINSTAPFGADKNSGIFNPYHKLLDIIVDPRLDDISEKQWYMLSAQGTDTIEVAYLDGNDEPYLEQQEGFIVDGVAWKVRIDAGVAALDYRGMVKSGGTDSL
>NZ_CP024289.1|WP_028985837.1|1788533_1788815_-|hypothetical-protein
MTEAEILGLIRRVAGISQQVDEQATQPDSMTADNYVRVVVEVMRGDGIQLNDVDMRNIRTRVLELLAYRRRVEMYREKEKITYHWKKPERLRR
>NZ_CP024289.1|WP_000735412.1|1786406_1787867_+|two-component-system-sensor-histidine-kinase-PhoQ
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
>NZ_CP024289.1|WP_001265481.1|1785735_1786407_+|two-component-system-response-regulator-PhoP
MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR
>NZ_CP024289.1|WP_000423729.1|1784197_1785568_+|adenylosuccinate-lyase
MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK
>NZ_CP024289.1|WP_001297479.1|1783552_1784194_+|high-frequency-lysogenization-protein-HflD
MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL
>NZ_CP024289.1|WP_001297484.1|1782410_1783517_+|tRNA-2-thiouridine(34)-synthase-MnmA
MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV
>NZ_CP024289.1|WP_000476089.1|1781895_1782357_+|phosphatase-NudJ
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILKASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI
>NZ_CP024289.1|WP_000770163.1|1793898_1794198_-|DUF4222-domain-containing-protein
MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVAGRCVTYRREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK
>NZ_CP024289.1|WP_001204973.1|1794203_1794437_-|hypothetical-protein
MRDIYHETTDRVFLALSHSENMMEILRIWLETLGDNERDKQKSRIATALITLLEPVINELQEIETLHDRYNEQHTGE
>NZ_CP024289.1|WP_052904140.1|1794438_1794660_-|hypothetical-protein
MRDDRFYSLKQEFSGVPDDAADALSSISEIMRVAFFFLCTDEHRDTGLNILDIAANYADFVTEAVLRKTTDGN
>NZ_CP024289.1|WP_052904139.1|1794652_1794892_-|hypothetical-protein
MHNKTTPDAAAEAIKTLMHALIDISVIADRAHKHATSETEYTGAFVPHSLAVMQFSADMALNEAKTILITDCENGGGYA
>NZ_CP024289.1|WP_000609225.1|1794881_1795094_-|hypothetical-protein
MINLSLTDLNRIQFREKFTGQLLVNVDKGRVVCNYHLPDEAIVATRESLQEITKRAGMINTNIQGMLYAQ
>NZ_CP024289.1|WP_157774579.1|1795086_1795644_-|host-cell-division-inhibitor-Icd-like-protein
MVAVNHIPHLVHTQTAFVWRFLALNIGEKKQLIASVENSYDSRAPHKTGVGISLLKTTEAHSTRPACFFVPHSHTLSMVGCTGAEQSAPVSSVSGKANPVQSATSEISLLRGGYLNHTEEAANMATTPALVHSQTAFIWRFIAFGASDHQIIHVTAWTEREARNRCPSGCVAVFAARIRQEVRHD
>NZ_CP024289.1|WP_001403025.1|1795842_1796148_+|hypothetical-protein
MSRSSVNNKSQQLNARFPHEVVSGIEASLQPGETKANFIVTAVRGEIARRQAEGSGENPLVSSLDALAQVEKLGIKAAEEIGQLVTVAREELQRRKTKEPE
>NZ_CP024289.1|WP_157774580.1|1796205_1796433_+|hypothetical-protein
MTNNTLSPIQDTQTQDDEIIRQRQSEACARLEEELTRTKIPPPAPHLVPPEKFALEDFVDKYPRRLKSGKNRPPG
>NZ_CP024289.1|WP_000103621.1|1796653_1796833_+|hypothetical-protein
MSTHKNERRGNPPFQFRLDPDLREKMEKAQQQDGDDSLAAWIKRIIRKELQQRGIEPKE
>NZ_CP024289.1|WP_000182306.1|1796890_1797094_+|hypothetical-protein
MTNKESTNTPSQKTNREHENMALEHESERFAPCAFVLDEFLKKYSRSERMKMAAQYGPNKQGNCPPA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_3

1964910-1965001

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024289_3

>merge|NZ_CP024289|3|1964910-1965001|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP024289|3|2|1964910-1965001|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_000535343.1\|1967840_1969100_-\|YccE-family-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP024289.1\|WP_001299828.1\|1954424_1958387_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP024289.1\|WP_001143120.1\|1966041_1966269_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP024289.1\|WP_001001196.1\|1962351_1962942_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP024289.1\|WP_000979516.1\|1954160_1954370_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000420615.1\|1969360_1970281_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP024289.1\|WP_001307102.1\|1958426_1959065_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP024289.1\|WP_096096029.1\|1971274_1973821_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP024289.1\|WP_001151437.1\|1965424_1966021_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP024289.1\|WP_001126780.1\|1961147_1961534_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP024289.1\|WP_000024561.1\|1970280_1970586_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP024289.1\|WP_001240629.1\|1963467_1964796_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP024289.1\|WP_001307100.1\|1960443_1961136_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP024289.1\|WP_001044340.1\|1966306_1967548_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP024289.1\|WP_001230242.1\|1973820_1974993_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP024289.1\|WP_099528383.1\|1961541_1962342_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP024289.1\|WP_000209869.1\|1970678_1971278_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP024289.1\|WP_001345642.1\|1959352_1960444_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP024289.1\|WP_001028095.1\|1962952_1963447_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP024289.1\|WP_001120112.1\|1975122_1975815_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_000535343.1\|1967840_1969100_-\|YccE-family-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
NZ_CP024289.1\|WP_001299828.1\|1954424_1958387_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP024289.1\|WP_001143120.1\|1966041_1966269_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP024289.1\|WP_001001196.1\|1962351_1962942_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.45614e-128
NZ_CP024289.1\|WP_001120112.1\|1975122_1975815_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	5.89892e-138
NZ_CP024289.1\|WP_000420615.1\|1969360_1970281_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP024289.1\|WP_001307102.1\|1958426_1959065_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	5.96431e-152
NZ_CP024289.1\|WP_096096029.1\|1971274_1973821_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP024289.1\|WP_001151437.1\|1965424_1966021_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP024289.1\|WP_001126780.1\|1961147_1961534_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP024289.1\|WP_000024561.1\|1970280_1970586_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	2.74017e-64
NZ_CP024289.1\|WP_001240629.1\|1963467_1964796_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP024289.1\|WP_001307100.1\|1960443_1961136_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	2.45431e-169
NZ_CP024289.1\|WP_001044340.1\|1966306_1967548_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP024289.1\|WP_001230242.1\|1973820_1974993_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP024289.1\|WP_099528383.1\|1961541_1962342_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	5.22349e-140
NZ_CP024289.1\|WP_000209869.1\|1970678_1971278_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	5.28244e-84
NZ_CP024289.1\|WP_001345642.1\|1959352_1960444_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP024289.1\|WP_001028095.1\|1962952_1963447_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106

>NZ_CP024289.1|WP_001240629.1|1963467_1964796_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPYERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP024289.1|WP_001028095.1|1962952_1963447_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP024289.1|WP_001001196.1|1962351_1962942_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTVEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL
>NZ_CP024289.1|WP_099528383.1|1961541_1962342_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIKHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP024289.1|WP_001126780.1|1961147_1961534_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP024289.1|WP_001307100.1|1960443_1961136_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
>NZ_CP024289.1|WP_001345642.1|1959352_1960444_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP024289.1|WP_001307102.1|1958426_1959065_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRTVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSSKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP024289.1|WP_001299828.1|1954424_1958387_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP024289.1|WP_000979516.1|1954160_1954370_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP024289.1|WP_001151437.1|1965424_1966021_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP024289.1|WP_001143120.1|1966041_1966269_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP024289.1|WP_001044340.1|1966306_1967548_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIATTVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPKDANGFCPMDKFDSVLNEAVK
>NZ_CP024289.1|WP_000535343.1|1967840_1969100_-|YccE-family-protein
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSIALFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRTLRTNDTQIYSGVSGGITYTIQYVQNVDIVRVSLPGRGSESITDFKGYYWYGFMEYIENITACDDVFSEYCLDDNENMSIQPARINTPGISDLDSGIDLSGISFIQRETNQALGLKSAPVDGDGYCLLRAILVLKEHDYSWALGSYKTQKEVYNEFIKMVDKKTIEALVDTAFNDLREDAKTLFGVDLQSDNKIQGVGSFMSWSFLFFKKEFIDSCLYDKKCILHLPEFIFNDNKTRLVLDSAPEKMINEVKNFLTALSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLINTGNHYDVYLPPELFAQAYKLRNKEMNAQLDYLNRYAI
>NZ_CP024289.1|WP_000420615.1|1969360_1970281_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP024289.1|WP_000024561.1|1970280_1970586_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVTHP
>NZ_CP024289.1|WP_000209869.1|1970678_1971278_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR
>NZ_CP024289.1|WP_096096029.1|1971274_1973821_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVICIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGQKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGAVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP024289.1|WP_001230242.1|1973820_1974993_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP024289.1|WP_001120112.1|1975122_1975815_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_4

2228487-2228632

Orphan

Consensus_repeat	Method
CGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024289_4

>merge|NZ_CP024289|4|2228487-2228632|CRISPRCasFinder
CGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATACGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG

>NZ_CP024289|4|3|2228487-2228632|CRISPRCasFinder
CGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	GATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATA
CGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_000891515.1\|2239501_2239651_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	unknown	unknown	gnl\|CDD\|371231
NZ_CP024289.1\|WP_000118840.1\|2222889_2224044_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP024289.1\|WP_000246805.1\|2222147_2222903_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP024289.1\|WP_000042533.1\|2218877_2220899_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP024289.1\|WP_000679972.1\|2233849_2234803_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_CP024289.1\|WP_000891685.1\|2236812_2237871_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP024289.1\|WP_000213425.1\|2235993_2236812_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP024289.1\|WP_096096099.1\|2231104_2232538_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP024289.1\|WP_000767389.1\|2226515_2226992_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP024289.1\|WP_001295301.1\|2216391_2217381_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP024289.1\|WP_001295302.1\|2217777_2218686_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP024289.1\|WP_000815435.1\|2234843_2235839_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP024289.1\|WP_000604034.1\|2237873_2238563_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP024289.1\|WP_001307065.1\|2225167_2226457_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP024289.1\|WP_000593949.1\|2228660_2230922_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_CP024289.1\|WP_001147439.1\|2239779_2240568_+\|molybdenum-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182640
NZ_CP024289.1\|WP_001091569.1\|2227143_2228427_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP024289.1\|WP_000044868.1\|2221477_2222155_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP024289.1\|WP_000101997.1\|2238562_2239336_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP024289.1\|WP_099528388.1\|2224040_2225081_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_000891515.1\|2239501_2239651_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
NZ_CP024289.1\|WP_000118840.1\|2222889_2224044_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP024289.1\|WP_000246805.1\|2222147_2222903_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.57982e-172
NZ_CP024289.1\|WP_000042533.1\|2218877_2220899_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP024289.1\|WP_000679972.1\|2233849_2234803_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
NZ_CP024289.1\|WP_000891685.1\|2236812_2237871_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP024289.1\|WP_000213425.1\|2235993_2236812_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP024289.1\|WP_096096099.1\|2231104_2232538_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP024289.1\|WP_000767389.1\|2226515_2226992_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
NZ_CP024289.1\|WP_001295301.1\|2216391_2217381_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP024289.1\|WP_001295302.1\|2217777_2218686_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
NZ_CP024289.1\|WP_000815435.1\|2234843_2235839_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_CP024289.1\|WP_000604034.1\|2237873_2238563_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
NZ_CP024289.1\|WP_001307065.1\|2225167_2226457_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP024289.1\|WP_000593949.1\|2228660_2230922_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_CP024289.1\|WP_001147439.1\|2239779_2240568_+\|molybdenum-dependent-transcriptional-regulator	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	0
NZ_CP024289.1\|WP_001091569.1\|2227143_2228427_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP024289.1\|WP_000044868.1\|2221477_2222155_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	7.09172e-110
NZ_CP024289.1\|WP_000101997.1\|2238562_2239336_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
NZ_CP024289.1\|WP_099528388.1\|2224040_2225081_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0

>NZ_CP024289.1|WP_001091569.1|2227143_2228427_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_CP024289.1|WP_000767389.1|2226515_2226992_+|kinase-inhibitor
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>NZ_CP024289.1|WP_001307065.1|2225167_2226457_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>NZ_CP024289.1|WP_099528388.1|2224040_2225081_-|biotin-synthase-BioB
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINILVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>NZ_CP024289.1|WP_000118840.1|2222889_2224044_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLARLLASPCPGQQLVVTEGVFSMDGDIAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>NZ_CP024289.1|WP_000246805.1|2222147_2222903_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAIAAAFGRAAALYEQHADLQRQSADVLLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>NZ_CP024289.1|WP_000044868.1|2221477_2222155_-|ATP-dependent-dethiobiotin-synthetase-BioD
MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGSEKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>NZ_CP024289.1|WP_000042533.1|2218877_2220899_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP024289.1|WP_001295302.1|2217777_2218686_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>NZ_CP024289.1|WP_001295301.1|2216391_2217381_-|GTP-3',8-cyclase-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>NZ_CP024289.1|WP_000593949.1|2228660_2230922_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIISAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYKIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_CP024289.1|WP_096096099.1|2231104_2232538_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTLLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>NZ_CP024289.1|WP_000679972.1|2233849_2234803_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>NZ_CP024289.1|WP_000815435.1|2234843_2235839_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>NZ_CP024289.1|WP_000213425.1|2235993_2236812_+|pyridoxal-phosphatase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>NZ_CP024289.1|WP_000891685.1|2236812_2237871_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELVIKPGLWLYAQIKSVSITA
>NZ_CP024289.1|WP_000604034.1|2237873_2238563_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>NZ_CP024289.1|WP_000101997.1|2238562_2239336_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFIIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK
>NZ_CP024289.1|WP_000891515.1|2239501_2239651_-|multidrug-efflux-pump-associated-protein,-AcrZ-family
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH
>NZ_CP024289.1|WP_001147439.1|2239779_2240568_+|molybdenum-dependent-transcriptional-regulator
MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_5

3073694-3073826

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP024289_5

>merge|NZ_CP024289|5|3073694-3073826|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTCCTCACCAATATTGAAAACATGGCGTAGCAAAAAGAAATTTTCAATATTGCTTTATGGATCACCAATATTGAAAG

>NZ_CP024289|5|2|3073694-3073826|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTC
CTCACCAATATTGAAAA	CATGGCGTAGCAAAAAGAAATTTTCAATATTGCTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_000600725.1\|3068227_3068758_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP024289.1\|WP_099528412.1\|3070539_3071826_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP024289.1\|WP_000203741.1\|3070255_3070543_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP024289.1\|WP_000377194.1\|3066372_3068235_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP024289.1\|WP_001126376.1\|3081968_3085190_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP024289.1\|WP_099528413.1\|3086811_3087633_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP024289.1\|WP_000624375.1\|3065701_3066181_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP024289.1\|WP_000597260.1\|3085207_3086356_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP024289.1\|WP_000333120.1\|3081312_3081708_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP024289.1\|WP_000347139.1\|3075621_3076764_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP024289.1\|WP_000998542.1\|3065501_3065681_-\|antitoxin	unknown	unknown	gnl\|CDD\|377822
NZ_CP024289.1\|WP_001091483.1\|3071876_3072818_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP024289.1\|WP_001307563.1\|3078183_3079737_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP024289.1\|WP_000692206.1\|3072832_3073603_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP024289.1\|WP_000787103.1\|3074076_3075591_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP024289.1\|WP_000349932.1\|3076892_3078110_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP024289.1\|WP_000004397.1\|3079845_3080631_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP024289.1\|WP_001183200.1\|3068865_3070197_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP024289.1\|WP_000122876.1\|3080636_3081227_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP024289.1\|WP_000796358.1\|3064300_3064900_+\|DUF4291-domain-containing-protein	unknown	unknown	gnl\|CDD\|379483

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_000600725.1\|3068227_3068758_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
NZ_CP024289.1\|WP_099528412.1\|3070539_3071826_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP024289.1\|WP_000203741.1\|3070255_3070543_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP024289.1\|WP_000377194.1\|3066372_3068235_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP024289.1\|WP_001126376.1\|3081968_3085190_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP024289.1\|WP_099528413.1\|3086811_3087633_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.96175e-141
NZ_CP024289.1\|WP_000624375.1\|3065701_3066181_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_CP024289.1\|WP_000597260.1\|3085207_3086356_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP024289.1\|WP_000333120.1\|3081312_3081708_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	2.96175e-74
NZ_CP024289.1\|WP_000347139.1\|3075621_3076764_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP024289.1\|WP_000998542.1\|3065501_3065681_-\|antitoxin	gnl\|CDD\|377822	pfam07362, CcdA, Post-segregation antitoxin CcdA. This family consists of several Enterobacterial post-segregation antitoxin CcdA proteins. The F plasmid-carried bacterial toxin, the CcdB protein, is known to act on DNA gyrase in two different ways. CcdB poisons the gyrase-DNA complex, blocking the passage of polymerases and leading to double-strand breakage of the DNA. Alternatively, in cells that overexpress CcdB, the A subunit of DNA gyrase (GyrA) has been found as an inactive complex with CcdB. Both poisoning and inactivation can be prevented and reversed in the presence of the F plasmid-encoded antidote, the CcdA protein.	2.2737e-08
NZ_CP024289.1\|WP_001091483.1\|3071876_3072818_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP024289.1\|WP_001307563.1\|3078183_3079737_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP024289.1\|WP_000692206.1\|3072832_3073603_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	2.43681e-170
NZ_CP024289.1\|WP_000787103.1\|3074076_3075591_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP024289.1\|WP_000349932.1\|3076892_3078110_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP024289.1\|WP_000004397.1\|3079845_3080631_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	4.82171e-178
NZ_CP024289.1\|WP_001183200.1\|3068865_3070197_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.17797e-59
NZ_CP024289.1\|WP_000122876.1\|3080636_3081227_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	2.12106e-142
NZ_CP024289.1\|WP_000796358.1\|3064300_3064900_+\|DUF4291-domain-containing-protein	gnl\|CDD\|379483	pfam14124, DUF4291, Domain of unknown function (DUF4291). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 190 and 214 amino acids in length. There are two conserved sequence motifs: VYQAY and RMTW.	2.03117e-92

>NZ_CP024289.1|WP_000692206.1|3072832_3073603_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAVDAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP024289.1|WP_001091483.1|3071876_3072818_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYASVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP024289.1|WP_099528412.1|3070539_3071826_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSLSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKQGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP024289.1|WP_000203741.1|3070255_3070543_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP024289.1|WP_001183200.1|3068865_3070197_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVVFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP024289.1|WP_000600725.1|3068227_3068758_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_CP024289.1|WP_000377194.1|3066372_3068235_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLVQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_CP024289.1|WP_000624375.1|3065701_3066181_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP024289.1|WP_000998542.1|3065501_3065681_-|antitoxin
MNDKTFDFTSERDFVSRAHCVGLNLQATLQWNEVNEDAISALNEFAEETGCFSDEYRKF
>NZ_CP024289.1|WP_000796358.1|3064300_3064900_+|DUF4291-domain-containing-protein
MADYFEIRADYNQHTITIYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSNWGLKKDQQHILAIRIKRTFFDTLLEQAVLTTPEAHVYPHAGIWETLFAQANVYVQWDPERSINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVRKCHNLLINGKTTQAKSFLPPEKIYPVSAAARKALGMKNS
>NZ_CP024289.1|WP_000787103.1|3074076_3075591_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP024289.1|WP_000347139.1|3075621_3076764_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFTECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP024289.1|WP_000349932.1|3076892_3078110_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP024289.1|WP_001307563.1|3078183_3079737_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVVNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP024289.1|WP_000004397.1|3079845_3080631_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP024289.1|WP_000122876.1|3080636_3081227_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP024289.1|WP_000333120.1|3081312_3081708_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP024289.1|WP_001126376.1|3081968_3085190_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP024289.1|WP_000597260.1|3085207_3086356_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP024289.1|WP_099528413.1|3086811_3087633_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPSTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_6

4562735-4562852

Orphan

Consensus_repeat	Method
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024289_6

>merge|NZ_CP024289|6|4562735-4562852|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGATGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

>NZ_CP024289|6|4|4562735-4562852|CRISPRCasFinder
TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	GTGCTCAACTTGTTGATGTTGTTGTGTTTTGTACCTGA
TGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_000104211.1\|4550989_4551928_+\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
NZ_CP024289.1\|WP_000633577.1\|4563112_4563814_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP024289.1\|WP_000719990.1\|4557944_4558334_+\|enamine/imine-deaminase	unknown	unknown	gnl\|CDD\|105214
NZ_CP024289.1\|WP_001297155.1\|4567177_4567660_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP024289.1\|WP_000531193.1\|4566121_4567108_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP024289.1\|WP_000861734.1\|4555636_4557931_+\|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase	unknown	unknown	gnl\|CDD\|153087
NZ_CP024289.1\|WP_001041010.1\|4563918_4564815_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NZ_CP024289.1\|WP_000401598.1\|4560044_4561376_+\|HAAAP-family-serine/threonine-permease	unknown	unknown	gnl\|CDD\|273283
NZ_CP024289.1\|WP_000785722.1\|4568044_4568449_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
NZ_CP024289.1\|WP_001198780.1\|4564865_4565222_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP024289.1\|WP_001352528.1\|4554394_4555603_+\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
NZ_CP024289.1\|WP_000548347.1\|4552026_4553016_+\|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB	unknown	unknown	gnl\|CDD\|236317
NZ_CP024289.1\|WP_000096086.1\|4567755_4568055_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
NZ_CP024289.1\|WP_000031415.1\|4568451_4568757_-\|DUF883-domain-containing-protein	unknown	unknown	gnl\|CDD\|226941
NZ_CP024289.1\|WP_000460519.1\|4561403_4562714_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
NZ_CP024289.1\|WP_001295544.1\|4562925_4563090_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000107720.1\|4553037_4554369_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
NZ_CP024289.1\|WP_000145820.1\|4550456_4550801_-\|DNA-binding-transcriptional-activator-TdcR	unknown	unknown	gnl\|CDD\|236909
NZ_CP024289.1\|WP_000384145.1\|4565463_4565829_-\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP024289.1\|WP_000622115.1\|4558405_4559770_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_000104211.1\|4550989_4551928_+\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
NZ_CP024289.1\|WP_000633577.1\|4563112_4563814_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.02982e-67
NZ_CP024289.1\|WP_000719990.1\|4557944_4558334_+\|enamine/imine-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
NZ_CP024289.1\|WP_001297155.1\|4567177_4567660_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.8408e-29
NZ_CP024289.1\|WP_000531193.1\|4566121_4567108_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP024289.1\|WP_000861734.1\|4555636_4557931_+\|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP024289.1\|WP_001041010.1\|4563918_4564815_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.2986e-51
NZ_CP024289.1\|WP_000401598.1\|4560044_4561376_+\|HAAAP-family-serine/threonine-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	2.53913e-167
NZ_CP024289.1\|WP_000785722.1\|4568044_4568449_-\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
NZ_CP024289.1\|WP_001198780.1\|4564865_4565222_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.64644e-35
NZ_CP024289.1\|WP_001352528.1\|4554394_4555603_+\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
NZ_CP024289.1\|WP_000548347.1\|4552026_4553016_+\|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
NZ_CP024289.1\|WP_000096086.1\|4567755_4568055_-\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
NZ_CP024289.1\|WP_000031415.1\|4568451_4568757_-\|DUF883-domain-containing-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	1.46625e-41
NZ_CP024289.1\|WP_000460519.1\|4561403_4562714_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
NZ_CP024289.1\|WP_000107720.1\|4553037_4554369_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
NZ_CP024289.1\|WP_000145820.1\|4550456_4550801_-\|DNA-binding-transcriptional-activator-TdcR	gnl\|CDD\|236909	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional.	3.36123e-66
NZ_CP024289.1\|WP_000384145.1\|4565463_4565829_-\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	3.68376e-42
NZ_CP024289.1\|WP_000622115.1\|4558405_4559770_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0

>NZ_CP024289.1|WP_000460519.1|4561403_4562714_+|serine-dehydratase-subunit-alpha-family-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>NZ_CP024289.1|WP_000401598.1|4560044_4561376_+|HAAAP-family-serine/threonine-permease
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
>NZ_CP024289.1|WP_000622115.1|4558405_4559770_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>NZ_CP024289.1|WP_000719990.1|4557944_4558334_+|enamine/imine-deaminase
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>NZ_CP024289.1|WP_000861734.1|4555636_4557931_+|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase
MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>NZ_CP024289.1|WP_001352528.1|4554394_4555603_+|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVVIDTEMNNRSNSFGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA
>NZ_CP024289.1|WP_000107720.1|4553037_4554369_+|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>NZ_CP024289.1|WP_000548347.1|4552026_4553016_+|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>NZ_CP024289.1|WP_000104211.1|4550989_4551928_+|transcriptional-regulator-TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG
>NZ_CP024289.1|WP_000145820.1|4550456_4550801_-|DNA-binding-transcriptional-activator-TdcR
MTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
>NZ_CP024289.1|WP_001295544.1|4562925_4563090_-|hypothetical-protein
MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>NZ_CP024289.1|WP_000633577.1|4563112_4563814_-|pirin-family-protein
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>NZ_CP024289.1|WP_001041010.1|4563918_4564815_+|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK
>NZ_CP024289.1|WP_001198780.1|4564865_4565222_-|DUF805-domain-containing-protein
MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEGNSGSNRYGNDPKFGSN
>NZ_CP024289.1|WP_000384145.1|4565463_4565829_-|DUF805-domain-containing-protein
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
>NZ_CP024289.1|WP_000531193.1|4566121_4567108_-|glutathione-S-transferase-family-protein
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYISLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>NZ_CP024289.1|WP_001297155.1|4567177_4567660_-|DoxX-family-protein
MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>NZ_CP024289.1|WP_000096086.1|4567755_4568055_-|hypothetical-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>NZ_CP024289.1|WP_000785722.1|4568044_4568449_-|hypothetical-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>NZ_CP024289.1|WP_000031415.1|4568451_4568757_-|DUF883-domain-containing-protein
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_7

5040463-5041101

Unclear

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

10 spacers

The CRISPR arrays of NZ_CP024289_7

>merge|NZ_CP024289|7|5040463-5041101|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCAGCACTGCGGGAAATATTGTTGCTGCTGAGTTCCCCGCGCTAGCGGGGATAAACCGGCGGTAATTGCGTTATTTTGGCTGTTTTCCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGTCGTCGGGTCCAACAGGGGTCGGTTGTTCGCCGAGTTCCCCGCGCCAGCGGGGATAAACCGGAGCTGATATTTTGATAACATCAACAGTTCAAGAGTTCCCCGCGCCAGCGGGGATAAACCGATCGCGGCTCGACCCGGAGGCTCTATCTTGAGGAGTTCCCCGCGCCAGCGGGGATAAACCGCGCAACATCGCCAGATTTGTCGTAGGAAAGCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCTGCTTTCGTTTTAGGCAAGCTGTCATCTGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGAAAAGGGCCGCATTGACGGCCCTGTGTTATCGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGGTGGCGGTGGTGCTGTAATTCACACCGGTAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCCTCCAGTACTGTGATGCGATCTTTAAGTCCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP024289|7|3|5040463-5041101|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCAGCACTGCGGGAAATATTGTTGCTGCT
GAGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTAATTGCGTTATTTTGGCTGTTTTCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTCGGGTCCAACAGGGGTCGGTTGTTCGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCTGATATTTTGATAACATCAACAGTTCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGCGGCTCGACCCGGAGGCTCTATCTTGAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAACATCGCCAGATTTGTCGTAGGAAAGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTTTCGTTTTAGGCAAGCTGTCATCTGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTCCAGTACTGTGATGCGATCTTTAAGTCC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP024289|7|5|5040463-5041101|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCAGCACTGCGGGAAATATTGTTGCTGCT
GAGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTAATTGCGTTATTTTGGCTGTTTTCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTCGGGTCCAACAGGGGTCGGTTGTTCGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCTGATATTTTGATAACATCAACAGTTCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGCGGCTCGACCCGGAGGCTCTATCTTGAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAACATCGCCAGATTTGTCGTAGGAAAGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTTTCGTTTTAGGCAAGCTGTCATCTGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTCCAGTACTGTGATGCGATCTTTAAGTCC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP024289|7|1|5040463-5041101|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCAGCACTGCGGGAAATATTGTTGCTGCT
GAGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGTAATTGCGTTATTTTGGCTGTTTTCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTCGGGTCCAACAGGGGTCGGTTGTTCGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCTGATATTTTGATAACATCAACAGTTCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGCGGCTCGACCCGGAGGCTCTATCTTGAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAACATCGCCAGATTTGTCGTAGGAAAGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTTTCGTTTTAGGCAAGCTGTCATCTGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTCCAGTACTGTGATGCGATCTTTAAGTCC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_001288227.1\|5039172_5039313_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024289.1\|WP_000046785.1\|5029869_5031171_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP024289.1\|WP_000059312.1\|5045695_5047150_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP024289.1\|WP_001299652.1\|5048558_5049338_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP024289.1\|WP_000109367.1\|5050934_5051195_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP024289.1\|WP_001199973.1\|5039451_5040123_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP024289.1\|WP_000226815.1\|5031218_5033453_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP024289.1\|WP_001071648.1\|5034184_5034976_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP024289.1\|WP_000021321.1\|5044840_5045626_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP024289.1\|WP_001130266.1\|5050342_5050918_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP024289.1\|WP_001098105.1\|5047243_5048581_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP024289.1\|WP_001164557.1\|5043244_5044522_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP024289.1\|WP_000581937.1\|5033530_5033779_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP024289.1\|WP_001501379.1\|5049334_5050195_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP024289.1\|WP_001307365.1\|5051185_5052457_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP024289.1\|WP_099528452.1\|5027056_5029813_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP024289.1\|WP_000036723.1\|5036928_5038227_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP024289.1\|WP_000254745.1\|5033778_5034114_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP024289.1\|WP_000210878.1\|5035203_5036841_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP024289.1\|WP_096095987.1\|5041739_5043218_-\|FGGY-family-carbohydrate-kinase	unknown	unknown	gnl\|CDD\|212662

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_001130266.1\|5050342_5050918_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP024289.1\|WP_000046785.1\|5029869_5031171_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP024289.1\|WP_000059312.1\|5045695_5047150_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
NZ_CP024289.1\|WP_001299652.1\|5048558_5049338_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP024289.1\|WP_000109367.1\|5050934_5051195_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	8.55479e-42
NZ_CP024289.1\|WP_001199973.1\|5039451_5040123_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP024289.1\|WP_000226815.1\|5031218_5033453_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP024289.1\|WP_001071648.1\|5034184_5034976_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP024289.1\|WP_000021321.1\|5044840_5045626_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP024289.1\|WP_001098105.1\|5047243_5048581_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP024289.1\|WP_001164557.1\|5043244_5044522_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	4.01972e-29
NZ_CP024289.1\|WP_000581937.1\|5033530_5033779_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP024289.1\|WP_001501379.1\|5049334_5050195_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	3.33557e-88
NZ_CP024289.1\|WP_001307365.1\|5051185_5052457_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	3.54709e-126
NZ_CP024289.1\|WP_099528452.1\|5027056_5029813_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP024289.1\|WP_000036723.1\|5036928_5038227_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP024289.1\|WP_000254745.1\|5033778_5034114_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
NZ_CP024289.1\|WP_000210878.1\|5035203_5036841_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP024289.1\|WP_096095987.1\|5041739_5043218_-\|FGGY-family-carbohydrate-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.00414e-107

>NZ_CP024289.1|WP_001199973.1|5039451_5040123_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP024289.1|WP_001288227.1|5039172_5039313_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>NZ_CP024289.1|WP_000036723.1|5036928_5038227_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP024289.1|WP_000210878.1|5035203_5036841_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP024289.1|WP_001071648.1|5034184_5034976_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP024289.1|WP_000254745.1|5033778_5034114_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP024289.1|WP_000581937.1|5033530_5033779_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP024289.1|WP_000226815.1|5031218_5033453_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP024289.1|WP_000046785.1|5029869_5031171_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPKLEALLPKVRACLGSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP024289.1|WP_099528452.1|5027056_5029813_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLLQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG
>NZ_CP024289.1|WP_096095987.1|5041739_5043218_-|FGGY-family-carbohydrate-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTLAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWTWSEDSAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP024289.1|WP_001164557.1|5043244_5044522_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQFSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP024289.1|WP_000021321.1|5044840_5045626_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP024289.1|WP_000059312.1|5045695_5047150_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP024289.1|WP_001098105.1|5047243_5048581_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP024289.1|WP_001299652.1|5048558_5049338_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP024289.1|WP_001501379.1|5049334_5050195_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRGLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP024289.1|WP_001130266.1|5050342_5050918_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP024289.1|WP_000109367.1|5050934_5051195_-|ferredoxin-family-protein
MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP024289.1|WP_001307365.1|5051185_5052457_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDILQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024289_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024289_8

5066802-5067196

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP024289_8

>merge|NZ_CP024289|8|5066802-5067196|PILER-CR,CRT,CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGACTATATATTTCCTCAACGAGTAATTTTGAATGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTACCGCCCCGCAGAGGCGCTGGCAGATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATGACCTGTCGCTAAAACTCGCCGCGTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGTTTGGTCCACCAAATGTTTGATGCTTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGGGTGTGATTCCGCATACCAAGCAGTAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACACCC

>NZ_CP024289|8|4|5066802-5067135|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTATATATTTCCTCAACGAGTAATTTTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP024289|8|2|5066802-5067196|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTATATATTTCCTCAACGAGTAATTTTGAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCACTGGATGCGATGATGGATATCACTTA
GAATTCCCCGCCCCTGCGGTAGAACACCC

>NZ_CP024289|8|6|5066804-5067135|CRISPRCasFinder
GTTCCCCGCGCCAGCGGGGATAAACCG	ACTATATATTTCCTCAACGAGTAATTTTGAATGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GGATGACCTGTCGCTAAAACTCGCCGCGTACAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TCCGTTTGGTCCACCAAATGTTTGATGCTTCAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGGGTGTGATTCCGCATACCAAGCAGTAAGA
GTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024289.1\|WP_001219251.1\|5073054_5073534_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP024289.1\|WP_000085051.1\|5064116_5064863_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP024289.1\|WP_001246104.1\|5071497_5071821_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP024289.1\|WP_000063176.1\|5066411_5066705_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP024289.1\|WP_000246138.1\|5072344_5073055_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP024289.1\|WP_099528454.1\|5065491_5066415_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP024289.1\|WP_001084084.1\|5060943_5062506_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP024289.1\|WP_000206443.1\|5063050_5064106_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP024289.1\|WP_000490402.1\|5067216_5068254_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP024289.1\|WP_000039843.1\|5056800_5057535_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP024289.1\|WP_000029329.1\|5062502_5063039_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP024289.1\|WP_000281446.1\|5064844_5065495_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP024289.1\|WP_001233946.1\|5058146_5060846_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP024289.1\|WP_000517476.1\|5072014_5072326_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP024289.1\|WP_001173673.1\|5070842_5071448_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP024289.1\|WP_001090345.1\|5069415_5070843_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP024289.1\|WP_000956460.1\|5057799_5057952_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP024289.1\|WP_000372105.1\|5068505_5069414_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
NZ_CP024289.1\|WP_001219251.1\|5073054_5073534_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	5.43405e-104
NZ_CP024289.1\|WP_000085051.1\|5064116_5064863_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.83917e-49
NZ_CP024289.1\|WP_001246104.1\|5071497_5071821_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP024289.1\|WP_000063176.1\|5066411_5066705_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP024289.1\|WP_000246138.1\|5072344_5073055_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP024289.1\|WP_099528454.1\|5065491_5066415_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.6261e-157
NZ_CP024289.1\|WP_001084084.1\|5060943_5062506_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP024289.1\|WP_000206443.1\|5063050_5064106_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.21697e-155
NZ_CP024289.1\|WP_000490402.1\|5067216_5068254_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP024289.1\|WP_000039843.1\|5056800_5057535_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138
NZ_CP024289.1\|WP_000029329.1\|5062502_5063039_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP024289.1\|WP_000281446.1\|5064844_5065495_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.0289e-91
NZ_CP024289.1\|WP_001233946.1\|5058146_5060846_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.73118e-178
NZ_CP024289.1\|WP_000517476.1\|5072014_5072326_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP024289.1\|WP_001173673.1\|5070842_5071448_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP024289.1\|WP_001090345.1\|5069415_5070843_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP024289.1\|WP_000956460.1\|5057799_5057952_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
NZ_CP024289.1\|WP_000372105.1\|5068505_5069414_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>NZ_CP024289.1|WP_000063176.1|5066411_5066705_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP024289.1|WP_099528454.1|5065491_5066415_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVTCIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP024289.1|WP_000281446.1|5064844_5065495_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELRTGQQLCFNLRANPTICKSGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP024289.1|WP_000085051.1|5064116_5064863_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP024289.1|WP_000206443.1|5063050_5064106_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWAMAEKGTEQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP024289.1|WP_000029329.1|5062502_5063039_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP024289.1|WP_001084084.1|5060943_5062506_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEVEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKMWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRFVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVNLERIMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP024289.1|WP_001233946.1|5058146_5060846_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGLQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQDPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP024289.1|WP_000956460.1|5057799_5057952_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP024289.1|WP_000039843.1|5056800_5057535_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>NZ_CP024289.1|WP_000490402.1|5067216_5068254_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP024289.1|WP_000372105.1|5068505_5069414_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNLEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP024289.1|WP_001090345.1|5069415_5070843_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARIDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP024289.1|WP_001173673.1|5070842_5071448_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP024289.1|WP_001246104.1|5071497_5071821_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP024289.1|WP_000517476.1|5072014_5072326_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP024289.1|WP_000246138.1|5072344_5073055_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP024289.1|WP_001219251.1|5073054_5073534_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVTLHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024289_3	3.1\|1964936\|40\|NZ_CP024289\|CRISPRCasFinder	1964936-1964975	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP024289_5	5.1\|3073711\|42\|NZ_CP024289\|PILER-CR	3073711-3073752	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	0	1.0
NZ_CP024289_5	5.2\|3073770\|40\|NZ_CP024289\|PILER-CR	3073770-3073809	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	1	0.975
NZ_CP024289_1	1.1\|1182661\|38\|NZ_CP024289\|CRISPRCasFinder	1182661-1182698	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP024289_8	8.6\|5067136\|32\|NZ_CP024289\|CRT	5067136-5067167	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	3	0.906
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP038598	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence	2052-2083	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP033827	Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence	693-724	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP029125	Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence	518-549	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	2812-2843	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP030192	Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence	1835-1866	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP039274	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence	118-149	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP016528	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence	53-84	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP030227	Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence	3124-3155	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NC_013090	Endophytic bacterium LOB-07 plasmid pLK39, complete sequence	53-84	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP030009	Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence	2572-2603	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP011606	Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence	3835-3866	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NZ_CP044113	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence	3639-3670	7	0.781
NZ_CP024289_8	8.6\|5067136\|32\|NZ_CP024289\|CRT	5067136-5067167	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
NZ_CP024289_7	7.8\|5040919\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040919-5040950	32	NC_019341	Pseudomonas syringae plasmid pNCPPB880-40, complete sequence	6612-6643	8	0.75
NZ_CP024289_7	7.9\|5040980\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040980-5041011	32	AB452989	Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds	1966-1997	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	MK448792	Streptococcus phage Javan521, complete genome	5596-5627	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	NC_009018	Streptococcus phage phi3396, complete genome	4847-4878	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	NC_004584	Streptococcus prophage 315.1, complete genome	5700-5731	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	MK448770	Streptococcus phage Javan477, complete genome	5596-5627	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	MK448978	Streptococcus phage Javan532, complete genome	5595-5626	8	0.75
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	MK448785	Streptococcus phage Javan507, complete genome	5595-5626	8	0.75
NZ_CP024289_8	8.2\|5066892\|32\|NZ_CP024289\|PILER-CR,CRT	5066892-5066923	32	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	532343-532374	8	0.75
NZ_CP024289_8	8.4\|5067014\|32\|NZ_CP024289\|PILER-CR,CRT	5067014-5067045	32	MK448454	Streptococcus satellite phage Javan361, complete genome	9192-9223	8	0.75
NZ_CP024289_8	8.6\|5067136\|32\|NZ_CP024289\|CRT	5067136-5067167	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
NZ_CP024289_7	7.1\|5040492\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040492-5040523	32	MN693946	Marine virus AFVG_250M886, complete genome	12073-12104	9	0.719
NZ_CP024289_7	7.1\|5040492\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040492-5040523	32	NZ_CP050444	Tolypothrix sp. PCC 7910 plasmid unnamed4, complete sequence	26943-26974	9	0.719
NZ_CP024289_7	7.4\|5040675\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040675-5040706	32	MN693437	Marine virus AFVG_25M476, complete genome	3051-3082	9	0.719
NZ_CP024289_7	7.6\|5040797\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040797-5040828	32	NC_019911	Yersinia phage phi80-18 complete genome	19449-19480	9	0.719
NZ_CP024289_7	7.6\|5040797\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040797-5040828	32	NC_047805	Yersinia phage fHe-Yen3-01, complete genome	20682-20713	9	0.719
NZ_CP024289_8	8.2\|5066892\|32\|NZ_CP024289\|PILER-CR,CRT	5066892-5066923	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35771	9	0.719
NZ_CP024289_8	8.6\|5067136\|32\|NZ_CP024289\|CRT	5067136-5067167	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	9	0.719
NZ_CP024289_8	8.8\|5066892\|34\|NZ_CP024289\|CRISPRCasFinder	5066892-5066925	34	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	35740-35773	9	0.735
NZ_CP024289_8	8.1\|5066831\|32\|NZ_CP024289\|PILER-CR,CRT	5066831-5066862	32	MK448679	Streptococcus phage Javan137, complete genome	5204-5235	10	0.688
NZ_CP024289_7	7.1\|5040492\|32\|NZ_CP024289\|PILER-CR,CRISPRCasFinder,CRT	5040492-5040523	32	NZ_CP011146	Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence	102721-102752	11	0.656

1. spacer 3.1|1964936|40|NZ_CP024289|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 5.1|3073711|42|NZ_CP024289|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
******************************************

3. spacer 5.2|3073770|40|NZ_CP024289|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagcaaaaagaaattttcaatattgctttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *****************************

4. spacer 1.1|1182661|38|NZ_CP024289|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 8.6|5067136|32|NZ_CP024289|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
*.*********************.*******.

6. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

7. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

8. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

9. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

10. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

11. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

12. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

13. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

14. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

15. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

16. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

17. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

18. spacer 8.6|5067136|32|NZ_CP024289|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgcactggatgcgatgatggat-atcactta	CRISPR spacer
ggcgcactggctgcgatgaaggacgatcaacc-	Protospacer
********** ******** ***. **** ..

19. spacer 7.8|5040919|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NC_019341 (Pseudomonas syringae plasmid pNCPPB880-40, complete sequence) position: , mismatch: 8, identity: 0.75

aaaagggccgcattgacggccctgtgttatcg	CRISPR spacer
aaaagggccgcattagcggcccttttaatttg	Protospacer
**************..******* *    *.*

20. spacer 7.9|5040980|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75

gggtggcggtggtgctgtaattcacaccggta	CRISPR spacer
ggcgcgtggtggtgctgttgttcacaccggcc	Protospacer
**   *.*********** .**********.

21. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

22. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

23. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

24. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

25. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

26. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 8, identity: 0.75

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
aatggatatttccacaacaagtaattttttag	Protospacer
* *. ******** ****.*********  *

27. spacer 8.2|5066892|32|NZ_CP024289|PILER-CR,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
catcatcctcccgcagatgcgctggccgatcc	Protospacer
  *.*.* .******** ******** *****

28. spacer 8.4|5067014|32|NZ_CP024289|PILER-CR,CRT matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75

tccgtttggtccaccaaatgtttgatgcttca	CRISPR spacer
tcttatcaatccaccaaatttttgattcttca	Protospacer
**.  *...********** ****** *****

29. spacer 8.6|5067136|32|NZ_CP024289|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcactggatgcgatgatggata---tcactta	CRISPR spacer
ggcgcactggaagcggtgatggaggggcgcac---	Protospacer
*********** ***.******* .    ***

30. spacer 7.1|5040492|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to MN693946 (Marine virus AFVG_250M886, complete genome) position: , mismatch: 9, identity: 0.719

ctggcagcactgcgggaaatattgttgctgct	CRISPR spacer
tcagcagcactgcgggaactatttttgtcgaa	Protospacer
...*************** **** ***..*

31. spacer 7.1|5040492|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050444 (Tolypothrix sp. PCC 7910 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcagcactgcgggaaatatt-gttgctgct	CRISPR spacer
ctggcagcactgctggaaacattagccagcgt-	Protospacer
************* *****.*** *... .*.

32. spacer 7.4|5040675|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to MN693437 (Marine virus AFVG_25M476, complete genome) position: , mismatch: 9, identity: 0.719

gagctgatattttgataacatcaacagttcaa	CRISPR spacer
aacaatagtttttgattacatcaacagatcaa	Protospacer
.*    *  ******* ********** ****

33. spacer 7.6|5040797|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NC_019911 (Yersinia phage phi80-18 complete genome) position: , mismatch: 9, identity: 0.719

cgcaacatcgccagatttgtcgtaggaaagca	CRISPR spacer
cgcaacatcgccatatatgtcgttaggtactc	Protospacer
************* ** ****** .*. * .

34. spacer 7.6|5040797|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NC_047805 (Yersinia phage fHe-Yen3-01, complete genome) position: , mismatch: 9, identity: 0.719

cgcaacatcgccagatttgtcgtaggaaagca	CRISPR spacer
cgcaacatcgccatatatgtcgttaggtactc	Protospacer
************* ** ****** .*. * .

35. spacer 8.2|5066892|32|NZ_CP024289|PILER-CR,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtttaccgccccgcagaggcgctggcagatcc	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgac	Protospacer
    ******.*** *************   *

36. spacer 8.6|5067136|32|NZ_CP024289|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcactggatgcgatgatggatatcactta	CRISPR spacer
ggcgcactggaaccgatgatggatgcgatgag	Protospacer
***********  ***********.. *.  .

37. spacer 8.8|5066892|34|NZ_CP024289|CRISPRCasFinder matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.735

gtttaccgccccgcagaggcgctggcag-atccgt	CRISPR spacer
cgagaccgcctcgccgaggcgctggcagcgaccg-	Protospacer
    ******.*** ************* . ***

38. spacer 8.1|5066831|32|NZ_CP024289|PILER-CR,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 10, identity: 0.688

actatatatttcctcaacgagtaattttgaat	CRISPR spacer
gatggatatttccacaacaagtaattttttgg	Protospacer
. *. ******** ****.*********  .

39. spacer 7.1|5040492|32|NZ_CP024289|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 11, identity: 0.656

ctggcagcactgcgggaaatattgttgctgct	CRISPR spacer
tacccagcacggcaggaaatattgttggaaaa	Protospacer
.   ****** **.*************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8931 : 16071

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278994.1\|8931_9570_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590392.1\|9566_10829_-	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
WP_000847985.1\|10825_11734_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001297141.1\|11929_12697_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
WP_001141330.1\|12747_13404_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	4.3e-50	46.7
WP_001272881.1\|13509_16071_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.4

DBSCAN-SWA_2

87540 : 95304

Escherichia_phage(66.67%)

transposase,integrase

attL 78720:78733|attR 95614:95627

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
78720:78733	attL	NA	NA	NA	NA
WP_085947771.1\|87540_88702_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
WP_000577254.1\|88854_90573_+	ATP-binding protein	A0A1B5FPD5	Escherichia_phage	3.2e-307	99.8
WP_000214990.1\|90574_92323_+	hypothetical protein	A0A1B5FPH1	Escherichia_phage	0.0e+00	99.8
WP_000448925.1\|92394_92811_-	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-72	100.0
WP_099528455.1\|92849_94079_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	7.6e-234	99.8
WP_000162574.1\|94821_95304_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
95614:95627	attR	NA	NA	NA	NA

DBSCAN-SWA_3

371213 : 415642

Enterobacteria_phage(50.0%)

holin,integrase,coat,lysis,tail,terminase

attL 368745:368761|attR 417652:417668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
368745:368761	attL	NA	NA	NA	NA
WP_000194515.1\|371213_372647_-	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	7.0e-29	25.4
WP_001274887.1\|372862_373777_+	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_001197023.1\|373848_375096_+	oligosaccharide MFS transporter	NA	NA	NA	NA
WP_001163428.1\|375625_375826_-	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
WP_072617401.1\|375950_376295_-	hypothetical protein	K7PJY7	Enterobacterial_phage	4.5e-59	98.2
WP_000545732.1\|376321_376489_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	4.9e-27	98.2
WP_069912920.1\|376546_377347_-	hypothetical protein	K7P7Q8	Enterobacteria_phage	3.7e-157	98.5
WP_000026225.1\|377405_377687_-	hypothetical protein	A0A0K2FIU9	Enterobacteria_phage	1.4e-50	98.9
WP_099528308.1\|377889_378303_-	ead/Ea22-like family protein	K7P6J7	Enterobacteria_phage	1.3e-33	44.1
WP_099528309.1\|378299_378881_-	hypothetical protein	E7C9P6	Salmonella_phage	3.9e-63	65.7
WP_001682200.1\|378877_379042_-	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	1.6e-22	98.1
WP_001111304.1\|379052_379349_-	DUF2856 family protein	A5VWB0	Enterobacteria_phage	7.8e-52	100.0
WP_000951325.1\|379372_379756_-	hypothetical protein	A0A2I6PID1	Escherichia_phage	3.8e-67	100.0
WP_000031367.1\|379755_380361_-	ERF family protein	K7P6W7	Enterobacteria_phage	4.1e-108	100.0
WP_001243355.1\|380617_380770_-	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_000972063.1\|380754_380889_-	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_000597940.1\|380972_381221_-	hypothetical protein	K7P6N6	Enterobacteria_phage	1.6e-37	100.0
WP_099528310.1\|381396_382020_-	hypothetical protein	K7PKU5	Enterobacteria_phage	1.7e-109	98.6
WP_000340008.1\|382031_382358_-	antitermination protein	A4KWR0	Enterobacteria_phage	2.7e-53	100.0
WP_000026554.1\|382834_383740_-	hypothetical protein	A4KWU2	Enterobacteria_phage	6.3e-177	100.0
WP_001274755.1\|383826_384540_-	LexA family transcriptional regulator	A4KWS8	Enterobacteria_phage	2.1e-127	100.0
WP_000437875.1\|384640_384841_+	hypothetical protein	A4KWT7	Enterobacteria_phage	4.3e-30	100.0
WP_000251073.1\|384959_385253_+	hypothetical protein	K7P6Y2	Enterobacteria_phage	2.8e-46	100.0
WP_000166207.1\|385285_385432_+	DUF2740 domain-containing protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_099528311.1\|385424_386285_+	replication protein	K7PL20	Enterobacteria_phage	2.5e-159	99.3
WP_001331794.1\|386392_388273_+	bifunctional DNA primase/helicase	K7PK08	Enterobacteria_phage	0.0e+00	100.0
WP_000807325.1\|388349_388556_+	hypothetical protein	K7P7Y0	Enterobacteria_phage	6.9e-31	97.1
WP_085455278.1\|388573_388894_+	hypothetical protein	A0A2I6PIG0	Escherichia_phage	1.3e-36	74.5
WP_016262211.1\|388898_389153_+	hypothetical protein	A0A2I6PIF4	Escherichia_phage	1.5e-40	100.0
WP_099528312.1\|389133_389574_+	recombination protein NinB	A0A2I6PIF6	Escherichia_phage	1.0e-79	97.9
WP_000113772.1\|389710_389887_+	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_001504515.1\|389889_390291_+	hypothetical protein	G9L690	Escherichia_phage	9.2e-72	98.5
WP_099528313.1\|390250_390460_+	protein ninF	G9L691	Escherichia_phage	4.5e-30	95.6
WP_040091916.1\|390452_391064_+	recombination protein NinG	A0A2D1GLP2	Escherichia_phage	1.0e-98	99.5
WP_099528314.1\|391060_391267_+	protein ninH	Q716C0	Shigella_phage	3.6e-32	98.5
WP_099528315.1\|391244_391916_+	serine/threonine protein phosphatase	Q716B9	Shigella_phage	6.6e-131	97.8
WP_099528316.1\|391906_392425_+	DUF1133 family protein	A5VW83	Enterobacteria_phage	9.4e-93	97.1
WP_000783734.1\|392885_393209_+\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_000229392.1\|393192_393669_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
WP_099528317.1\|393665_394133_+\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	1.8e-74	94.8
WP_001139682.1\|394120_394273_+	hypothetical protein	Q716B2	Shigella_phage	2.1e-21	100.0
WP_001016386.1\|394475_394994_+	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	3.2e-93	100.0
WP_000807823.1\|395288_395531_+	DUF2560 family protein	A0A0M4R322	Salmonella_phage	8.3e-36	98.8
WP_023241099.1\|395532_395712_+	hypothetical protein	A0A088CPS9	Enterobacteria_phage	3.2e-24	98.3
WP_000729922.1\|395735_396224_+	DNA-packaging protein gp3	A0A0M3ULC0	Salmonella_phage	5.0e-88	100.0
WP_000417851.1\|396201_397701_+\|terminase	terminase	A0A2D1GLW6	Escherichia_phage	4.8e-307	100.0
WP_023486193.1\|397701_399867_+	packaging glycoprotein	A0A2D1GLJ6	Escherichia_phage	0.0e+00	99.7
WP_099528318.1\|399880_400792_+	scaffolding protein	A0A2D1GLN7	Escherichia_phage	3.7e-161	99.7
WP_059332935.1\|400791_402087_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	6.1e-242	99.1
WP_023486190.1\|402404_402905_+	DNA stabilization, phage-associated	G8EYJ2	Enterobacteria_phage	4.6e-89	97.6
WP_052906985.1\|402905_404324_+	hypothetical protein	Q9AYZ4	Salmonella_phage	6.0e-275	99.2
WP_052906986.1\|404323_405172_+	hypothetical protein	Q716G6	Shigella_phage	7.3e-103	98.9
WP_001701171.1\|405171_405627_+	DUF2824 family protein	G5DA79	Enterobacteria_phage	4.4e-86	98.0
WP_099528319.1\|405629_406322_+	DNA transfer protein	G5DA80	Enterobacteria_phage	7.8e-111	99.1
WP_001701217.1\|406331_407720_+	DNA transfer protein gp20	A0A220NR03	Salmonella_phage	2.6e-150	64.9
WP_099528320.1\|407719_409717_+	DNA transfer protein	Q716G2	Shigella_phage	0.0e+00	98.6
WP_099528321.1\|409881_412020_+\|tail	phage tail protein	Q9AYY6	Salmonella_phage	4.8e-58	65.8
WP_099528322.1\|412058_413066_-	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	2.4e-12	27.5
WP_099528323.1\|413249_414398_-\|integrase	prophage integrase IntS	K7P7E1	Enterobacteria_phage	2.2e-219	99.0
WP_000368131.1\|414709_415642_-	transporter	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
417652:417668	attR	NA	NA	NA	NA

DBSCAN-SWA_4

655652 : 663961

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569327.1\|655652_656579_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8
WP_000783120.1\|656583_657315_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216961.1\|657295_657403_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|657462_658194_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|658415_660101_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_096844500.1\|660097_660817_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|660863_661334_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001295429.1\|661374_661836_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001326004.1\|661960_663961_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.8

DBSCAN-SWA_5

916141 : 977196

Escherichia_phage(44.83%)

holin,capsid,tRNA,integrase,lysis,tail,head,portal,terminase

attL 908647:908665|attR 945373:945391

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
908647:908665	attL	NA	NA	NA	NA
WP_001025326.1\|916141_917875_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001300190.1\|918090_918657_+	VOC family protein	NA	NA	NA	NA
WP_001185741.1\|918670_919417_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001214304.1\|919804_920905_+	cytochrome c	NA	NA	NA	NA
WP_000176841.1\|920929_923359_+	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
WP_000564742.1\|923523_924495_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000019588.1\|924491_925235_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000252980.1\|925275_925671_-	hypothetical protein	NA	NA	NA	NA
WP_096096185.1\|925723_926488_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.0e-72	99.2
WP_028985372.1\|926504_927791_-\|integrase	site-specific integrase	Q20GI2	Phage_258-320	1.6e-247	97.2
WP_001193437.1\|927824_928079_-	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
WP_032295370.1\|928097_928232_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	8.7e-19	88.6
WP_001367902.1\|928513_928885_-	hypothetical protein	Q8W655	Enterobacteria_phage	4.2e-63	95.9
WP_000720013.1\|928925_929753_-	hypothetical protein	Q8W654	Enterobacteria_phage	1.6e-131	99.6
WP_028985373.1\|930122_930695_-	hypothetical protein	Q8W653	Enterobacteria_phage	9.7e-75	67.6
WP_000553977.1\|930700_930883_-	hypothetical protein	Q8W652	Enterobacteria_phage	2.9e-09	52.7
WP_000147364.1\|931081_931282_-	hypothetical protein	NA	NA	NA	NA
WP_050457556.1\|931278_931752_-	helix-turn-helix domain-containing protein	A0A1B5FPB8	Escherichia_phage	6.0e-22	75.4
WP_028985374.1\|932135_932840_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	2.4e-67	53.2
WP_028985375.1\|932963_933209_+	helix-turn-helix domain-containing protein	A0A0N7C1T6	Escherichia_phage	2.2e-12	52.9
WP_000867913.1\|933279_933573_-	hypothetical protein	NA	NA	NA	NA
WP_096096184.1\|933692_934400_+	DNA-binding protein	Q8W645	Enterobacteria_phage	1.6e-114	88.5
WP_000794367.1\|934452_935277_+	transporter	Q8W644	Enterobacteria_phage	1.0e-157	99.6
WP_028985377.1\|935273_936125_+	hypothetical protein	Q8HA97	Salmonella_phage	4.8e-102	68.7
WP_000618002.1\|936121_936346_+	hypothetical protein	A0A1C9II64	Salmonella_phage	9.8e-15	52.1
WP_096096181.1\|936342_937254_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	3.9e-142	90.6
WP_028985379.1\|937273_938164_+	ATP-binding protein	Q8W641	Enterobacteria_phage	1.3e-81	62.9
WP_028985380.1\|938160_939561_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	1.2e-243	91.3
WP_001065352.1\|939557_939815_+	hypothetical protein	Q8W639	Enterobacteria_phage	1.2e-21	71.1
WP_050864163.1\|939866_940856_+	DUF968 domain-containing protein	S5MW46	Escherichia_phage	9.5e-195	99.4
WP_024213837.1\|940874_941309_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	5.3e-81	98.6
WP_000691354.1\|941815_942763_+	Shiga toxin Stx1 subunit A	Q777W4	Enterobacteria_phage	3.2e-171	100.0
WP_000752026.1\|942772_943042_+	Shiga toxin Stx1a subunit B	Q7AYI7	Enterobacteria_phage	1.6e-43	100.0
WP_099528339.1\|943545_945483_+	SASA family carbohydrate esterase	S5MDQ7	Escherichia_phage	0.0e+00	94.3
945373:945391	attR	NA	NA	NA	NA
WP_000142786.1\|945616_945796_+	DUF1378 family protein	A0A088CBQ0	Shigella_phage	3.2e-24	94.9
WP_001290210.1\|945836_946082_+	DUF826 domain-containing protein	A0A2R2Z348	Escherichia_phage	3.6e-18	100.0
WP_000284506.1\|946159_946375_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_096096232.1\|946378_946963_+	hypothetical protein	Q08JA0	Stx2-converting_phage	3.8e-50	83.3
WP_001063217.1\|946942_947263_-	hypothetical protein	NA	NA	NA	NA
WP_096096231.1\|947388_947922_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.6e-100	96.6
WP_001056888.1\|948196_948769_+	hypothetical protein	A0A088CD55	Shigella_phage	9.0e-97	88.4
WP_032295774.1\|948768_948918_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.0e-11	77.6
WP_032295775.1\|948920_949358_+\|lysis	lysis protein	A0A0P0ZFH2	Escherichia_phage	1.8e-68	97.2
WP_028985600.1\|949560_950103_+	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	4.1e-99	99.4
WP_000867498.1\|950771_951317_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	9.6e-80	83.3
WP_099528340.1\|951291_953217_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.1
WP_000198155.1\|953213_953420_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	8.4e-29	97.1
WP_001365551.1\|953416_955018_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.1e-308	98.5
WP_001702225.1\|954998_956318_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.2e-232	98.4
WP_001299443.1\|956327_956660_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
WP_096096245.1\|956714_957740_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.0e-191	98.8
WP_028985614.1\|957781_958180_+	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	5.7e-58	93.2
WP_028985615.1\|958191_958545_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.1e-52	86.3
WP_028985616.1\|958560_959136_+\|tail	tail protein	A0A2R9YJK4	Escherichia_phage	1.9e-49	57.8
WP_000683074.1\|959132_959528_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.2e-57	80.9
WP_099528341.1\|959535_960285_+\|tail	phage tail protein	S5M7Q5	Escherichia_phage	4.8e-130	94.0
WP_001299690.1\|960300_960732_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_071532372.1\|960758_961172_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.3e-41	82.8
WP_099528342.1\|961152_963732_+\|tail	phage tail tape measure protein	S5MBY3	Escherichia_phage	0.0e+00	86.1
WP_000847280.1\|963728_964058_+\|tail	phage tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
WP_001365876.1\|964057_964756_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.4e-131	98.3
WP_099528343.1\|964766_965510_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	1.3e-148	97.6
WP_072121435.1\|965455_966088_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.3e-100	90.5
WP_000078853.1\|970805_970946_+	Hok/Gef family protein	S5M7Q0	Escherichia_phage	2.9e-17	95.7
WP_062893928.1\|971091_972804_+\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.2e-67	51.0
WP_000438829.1\|972813_973026_+	hypothetical protein	NA	NA	NA	NA
WP_001373129.1\|973037_973712_+	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	3.3e-114	90.1
WP_001217534.1\|973981_974230_-	DinI-like family protein	S5MQI1	Escherichia_phage	8.0e-34	87.8
WP_000891610.1\|974547_975114_-	hydrolase	NA	NA	NA	NA
WP_001258662.1\|975423_977196_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_6

1268496 : 1321900

Escherichia_phage(52.73%)

holin,tail,portal,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000041534.1\|1268496_1270923_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.7e-214	49.1
WP_001295396.1\|1271121_1271427_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001321287.1\|1271534_1272245_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138581.1\|1272247_1272808_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705197.1\|1272842_1273184_-	DUF1283 family protein	NA	NA	NA	NA
WP_000598292.1\|1273318_1273645_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_001295394.1\|1273850_1275065_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836079.1\|1275076_1276096_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	9.7e-17	25.9
WP_072094462.1\|1276153_1276261_+	transporter	NA	NA	NA	NA
WP_028985839.1\|1276289_1277564_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	6.2e-154	61.5
WP_001368608.1\|1277599_1277836_-	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_096991160.1\|1277921_1280393_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.4e-53	54.9
WP_096991161.1\|1280488_1280677_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450222.1\|1280673_1280862_-	cell division inhibitor	NA	NA	NA	NA
WP_000389971.1\|1281409_1281595_+	hypothetical protein	NA	NA	NA	NA
WP_077637644.1\|1281675_1281933_-	hypothetical protein	I6PDF6	Cronobacter_phage	1.4e-09	84.2
WP_000380310.1\|1282088_1282241_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	5.1e-07	53.2
WP_024173670.1\|1282505_1283222_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	2.2e-55	45.4
WP_000471550.1\|1283271_1283487_+	hypothetical protein	NA	NA	NA	NA
WP_000693935.1\|1283483_1283921_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.5e-27	53.0
WP_052920214.1\|1284007_1285018_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	1.5e-171	89.1
WP_001379651.1\|1285049_1285472_+	replication protein	A0A0U2JGJ0	Escherichia_phage	5.7e-72	90.0
WP_052920211.1\|1285505_1286231_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.8e-86	70.1
WP_001151139.1\|1286246_1286654_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.2e-33	59.4
WP_029374881.1\|1286650_1286950_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	4.8e-49	94.9
WP_001373171.1\|1286978_1287134_+	hypothetical protein	NA	NA	NA	NA
WP_000991478.1\|1287130_1287442_+	hypothetical protein	A0A222YY67	Escherichia_phage	6.5e-49	79.6
WP_000829416.1\|1287571_1287790_+	hypothetical protein	H6WZG0	Escherichia_phage	1.2e-06	70.3
WP_000651125.1\|1287779_1288175_+	hypothetical protein	A0A193GYM6	Enterobacter_phage	1.6e-36	60.5
WP_024173669.1\|1288408_1288621_+	Hok/Gef family protein	A0A0P0ZAX5	Stx2-converting_phage	1.6e-14	64.3
WP_001341173.1\|1288787_1289060_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.9e-12	50.8
WP_099528354.1\|1289061_1290111_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	5.9e-110	54.6
WP_000904149.1\|1290123_1290483_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.3e-36	61.7
WP_001367730.1\|1290491_1291022_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.0e-71	71.4
WP_000917741.1\|1291264_1291462_+	hypothetical protein	A0A0P0ZDH6	Stx2-converting_phage	8.0e-29	100.0
WP_099528355.1\|1291613_1292672_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	3.9e-194	93.5
WP_000649753.1\|1293054_1294014_+	Shiga toxin Stx2c subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
WP_000738072.1\|1294025_1294295_+	Shiga toxin Stx2a subunit B	Q6DWN4	Enterobacteria_phage	1.2e-43	100.0
WP_099528356.1\|1294806_1296753_+	DUF1737 domain-containing protein	S5MDQ7	Escherichia_phage	0.0e+00	98.6
WP_000143458.1\|1296890_1297070_+	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_001290230.1\|1297110_1297356_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
WP_000284510.1\|1297433_1297649_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_001457151.1\|1297652_1298138_+	hypothetical protein	NA	NA	NA	NA
WP_001092868.1\|1298649_1299183_+	lysozyme	G9L6J6	Escherichia_phage	1.1e-99	95.5
WP_012816791.1\|1299701_1299887_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000373411.1\|1300361_1300838_+	DUF1441 family protein	S5MQK0	Escherichia_phage	1.9e-84	100.0
WP_099528357.1\|1300834_1302958_+\|terminase	phage terminase large subunit family protein	S5MDQ1	Escherichia_phage	0.0e+00	98.9
WP_000102416.1\|1302954_1303167_+	hypothetical protein	S5MBY8	Escherichia_phage	8.6e-29	97.1
WP_000974567.1\|1303166_1304669_+\|portal	phage portal protein	Q8VNN6	Enterobacteria_phage	1.2e-289	99.8
WP_122993599.1\|1304658_1306638_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.2
WP_001097065.1\|1306725_1307052_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001281349.1\|1307044_1307326_+	hypothetical protein	Q8VNN4	Enterobacteria_phage	1.0e-45	97.8
WP_047082262.1\|1307328_1307952_+\|tail	tail protein	Q8VNN3	Enterobacteria_phage	7.5e-105	99.0
WP_000682716.1\|1307964_1308363_+\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000235128.1\|1308370_1309120_+\|tail	phage tail protein	S5M7Q5	Escherichia_phage	3.6e-130	94.4
WP_000479054.1\|1309136_1309559_+\|tail	phage minor tail protein G	S5MQJ3	Escherichia_phage	5.1e-73	100.0
WP_000532075.1\|1309585_1309894_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	3.0e-54	99.0
WP_052920606.1\|1309937_1312568_+\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	92.6
WP_000847280.1\|1312564_1312894_+\|tail	phage tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
WP_001373202.1\|1312893_1313592_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.2e-130	97.4
WP_062867322.1\|1313602_1314346_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	5.0e-148	97.2
WP_072121435.1\|1314291_1314924_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.3e-100	90.5
WP_099528358.1\|1315163_1318850_+	DUF1983 domain-containing protein	S5MW25	Escherichia_phage	0.0e+00	87.9
WP_000078853.1\|1319048_1319189_+	Hok/Gef family protein	S5M7Q0	Escherichia_phage	2.9e-17	95.7
WP_099528359.1\|1319333_1320992_+\|tail	phage tail protein	S5MDN9	Escherichia_phage	5.9e-72	53.4
WP_000438830.1\|1321001_1321214_+	hypothetical protein	NA	NA	NA	NA
WP_001367883.1\|1321225_1321900_+	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.3e-113	89.2

DBSCAN-SWA_7

1613415 : 1679505

Escherichia_phage(29.79%)

holin,capsid,integrase,tail,head,protease,portal,terminase

attL 1627194:1627221|attR 1679657:1679684

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000422045.1\|1613415_1614465_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
WP_000559280.1\|1614684_1615443_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.5e-06	25.0
WP_001278904.1\|1615439_1616030_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_001291216.1\|1616069_1616942_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001295575.1\|1617042_1617663_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001285661.1\|1617659_1618541_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001700591.1\|1618678_1618723_+	trp operon leader peptide	NA	NA	NA	NA
WP_099528370.1\|1618814_1620377_+	anthranilate synthase component I	NA	NA	NA	NA
WP_000763511.1\|1620376_1621972_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_099528458.1\|1621975_1623334_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.5e-36	40.7
WP_000209520.1\|1623345_1624539_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000443056.1\|1624538_1625345_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000807651.1\|1625725_1625905_+	general stress protein	NA	NA	NA	NA
WP_001056491.1\|1625990_1626491_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_001079509.1\|1626536_1627043_+	ferritin-like domain-containing protein	NA	NA	NA	NA
1627194:1627221	attL	NA	NA	NA	NA
WP_001049908.1\|1628657_1629329_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	2.8e-105	83.0
WP_099528371.1\|1629397_1630666_-\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.6e-53	97.3
WP_060612545.1\|1630815_1631439_-	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	2.6e-65	59.9
WP_072121435.1\|1636035_1636668_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.3e-100	90.5
WP_099528343.1\|1636613_1637357_-\|tail	phage tail protein	S5MQI8	Escherichia_phage	1.3e-148	97.6
WP_001499019.1\|1637367_1638066_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	2.1e-132	98.7
WP_000343411.1\|1638065_1638407_-\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	6.9e-52	82.3
WP_000212883.1\|1638399_1641642_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	87.7
WP_122993267.1\|1641689_1641899_-	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	98.6
WP_000710952.1\|1641994_1642369_-\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	4.6e-65	100.0
WP_001275448.1\|1642383_1643100_-\|tail	major tail protein	A0A0P0ZDV1	Stx2-converting_phage	2.3e-126	99.2
WP_000133383.1\|1643166_1643511_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	4.2e-57	99.1
WP_000573358.1\|1643507_1643954_-	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	2.0e-75	99.3
WP_001029274.1\|1643950_1644301_-\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	6.0e-59	99.1
WP_060612395.1\|1644310_1644637_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	2.0e-53	99.1
WP_096096223.1\|1644633_1647219_-\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	97.0
WP_001063099.1\|1647164_1647386_-	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000172990.1\|1647430_1649368_-\|capsid	phage major capsid protein	Q6H9U8	Enterobacteria_phage	0.0e+00	99.7
WP_001376400.1\|1649431_1651093_-\|terminase	terminase large subunit	A0A0P0ZEI4	Stx2-converting_phage	0.0e+00	99.8
WP_000958387.1\|1651089_1651653_-\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
WP_000829192.1\|1651943_1652309_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.6e-62	96.7
WP_000095744.1\|1652350_1652551_+	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000828070.1\|1652682_1653009_-	TonB family protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
WP_053294045.1\|1653353_1653578_-	hypothetical protein	NA	NA	NA	NA
WP_071974579.1\|1653642_1653849_-	hypothetical protein	H6WRZ6	Salmonella_phage	4.6e-11	63.2
WP_072095843.1\|1654217_1654400_-	hypothetical protein	NA	NA	NA	NA
WP_053294111.1\|1654556_1655090_-	lysozyme	G9L6J6	Escherichia_phage	1.9e-101	97.7
WP_096096241.1\|1655094_1655310_-\|holin	holin	G9L6J5	Escherichia_phage	5.9e-33	98.6
WP_096096240.1\|1655387_1655633_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	1.5e-16	98.8
WP_062855780.1\|1655673_1655853_-	DUF1378 family protein	A0A0P0ZCJ7	Stx2-converting_phage	1.2e-23	93.2
WP_099528372.1\|1655987_1657952_-	SASA family carbohydrate esterase	A0A0P0ZBH7	Stx2-converting_phage	1.2e-297	79.4
WP_096096235.1\|1659816_1660542_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099528373.1\|1661237_1661666_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_000917733.1\|1663355_1663553_-	hypothetical protein	S5MQK8	Escherichia_phage	6.8e-28	96.9
WP_096695884.1\|1663726_1664440_-	hypothetical protein	NA	NA	NA	NA
WP_096695882.1\|1664693_1665359_-	antiterminator	I6PDF8	Cronobacter_phage	1.3e-59	51.6
WP_000904135.1\|1665351_1665714_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.0e-34	61.9
WP_001365882.1\|1665726_1666776_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	8.5e-109	54.0
WP_032347855.1\|1666777_1667047_-	hypothetical protein	I6PCV7	Cronobacter_phage	3.6e-11	50.8
WP_052327139.1\|1667100_1667328_-	hypothetical protein	NA	NA	NA	NA
WP_000042395.1\|1667916_1668234_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000882662.1\|1668336_1668549_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	2.5e-28	95.7
WP_000211993.1\|1668763_1669315_-	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	5.5e-43	53.3
WP_000215512.1\|1669666_1669852_-	hypothetical protein	NA	NA	NA	NA
WP_097338867.1\|1669911_1670673_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.4e-75	62.3
WP_099528375.1\|1670702_1671443_-	ATP-binding protein	A0A088CBP4	Shigella_phage	2.3e-113	82.7
WP_033811891.1\|1671449_1672439_-	phage O protein family	U5P0A0	Shigella_phage	3.9e-55	61.2
WP_000705131.1\|1672419_1672941_-	hypothetical protein	NA	NA	NA	NA
WP_000476991.1\|1672924_1673152_-	transcriptional regulator	NA	NA	NA	NA
WP_001003380.1\|1673229_1673637_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	5.5e-24	45.4
WP_000380317.1\|1673826_1673979_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	5.1e-07	53.2
WP_001365839.1\|1673990_1674359_+	hypothetical protein	NA	NA	NA	NA
WP_000450222.1\|1675143_1675332_+	cell division inhibitor	NA	NA	NA	NA
WP_000092839.1\|1675328_1675517_+	DUF1482 family protein	NA	NA	NA	NA
WP_000034483.1\|1675612_1678084_+	exonuclease	A0A192Y6E0	Salmonella_phage	2.0e-55	56.6
WP_000113183.1\|1678148_1678397_+	excisionase	NA	NA	NA	NA
WP_000113693.1\|1678374_1679505_+\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	4.0e-104	51.4
1679657:1679684	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1782410 : 1849807

Escherichia_phage(45.61%)

holin,tRNA,integrase,tail,portal,protease,terminase

attL 1809537:1809553|attR 1858041:1858057

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297484.1\|1782410_1783517_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001297479.1\|1783552_1784194_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000423729.1\|1784197_1785568_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
WP_001265481.1\|1785735_1786407_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000735412.1\|1786406_1787867_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_028985837.1\|1788533_1788815_-	hypothetical protein	NA	NA	NA	NA
WP_050867864.1\|1789072_1790962_-\|protease	Clp protease ClpP	Q8VNN5	Enterobacteria_phage	1.2e-182	51.5
WP_032307311.1\|1791620_1792043_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_032307310.1\|1792039_1792291_-	hypothetical protein	NA	NA	NA	NA
WP_047090986.1\|1792492_1793902_-	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.1e-114	59.8
WP_000770163.1\|1793898_1794198_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001204973.1\|1794203_1794437_-	hypothetical protein	NA	NA	NA	NA
WP_052904140.1\|1794438_1794660_-	hypothetical protein	NA	NA	NA	NA
WP_052904139.1\|1794652_1794892_-	hypothetical protein	NA	NA	NA	NA
WP_000609225.1\|1794881_1795094_-	hypothetical protein	NA	NA	NA	NA
WP_157774579.1\|1795086_1795644_-	host cell division inhibitor Icd-like protein	Q8SBF3	Shigella_phage	6.0e-13	40.0
WP_001403025.1\|1795842_1796148_+	hypothetical protein	NA	NA	NA	NA
WP_157774580.1\|1796205_1796433_+	hypothetical protein	NA	NA	NA	NA
WP_000103621.1\|1796653_1796833_+	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.5e-10	58.6
WP_000182306.1\|1796890_1797094_+	hypothetical protein	NA	NA	NA	NA
WP_000953271.1\|1797337_1797526_-	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	5.9e-13	64.2
WP_096970353.1\|1797900_1799130_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	8.9e-134	56.1
WP_001295435.1\|1799378_1800500_+	cupin domain-containing protein	NA	NA	NA	NA
WP_099528378.1\|1800645_1801875_-	peptidase T	NA	NA	NA	NA
WP_000531601.1\|1802124_1803261_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
WP_000799399.1\|1803244_1804108_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_022581964.1\|1804273_1804603_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001373129.1\|1804766_1805441_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	3.3e-114	90.1
WP_000438830.1\|1805452_1805665_-	hypothetical protein	NA	NA	NA	NA
WP_047082338.1\|1805674_1807378_-\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.1e-70	52.0
WP_000078855.1\|1807522_1807663_-	Hok/Gef family protein	S5M7Q0	Escherichia_phage	8.5e-17	93.5
WP_099528379.1\|1807861_1811548_-	DUF1983 domain-containing protein	S5MW25	Escherichia_phage	0.0e+00	88.3
1809537:1809553	attL	NA	NA	NA	NA
WP_072121435.1\|1811787_1812420_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.3e-100	90.5
WP_062867322.1\|1812365_1813109_-\|tail	phage tail protein	S5MQI8	Escherichia_phage	5.0e-148	97.2
WP_001365876.1\|1813119_1813818_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.4e-131	98.3
WP_000847280.1\|1813817_1814147_-\|tail	phage tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
WP_064506725.1\|1814143_1816750_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	77.1
WP_047081971.1\|1816739_1817144_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	4.5e-42	77.5
WP_032330778.1\|1817170_1817602_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.5e-40	65.7
WP_000235129.1\|1817621_1818371_-\|tail	phage tail protein	S5M7Q5	Escherichia_phage	2.1e-130	94.4
WP_000682716.1\|1818378_1818777_-\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_047082262.1\|1818789_1819413_-\|tail	tail protein	Q8VNN3	Enterobacteria_phage	7.5e-105	99.0
WP_001281349.1\|1819415_1819697_-	hypothetical protein	Q8VNN4	Enterobacteria_phage	1.0e-45	97.8
WP_001097065.1\|1819689_1820016_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001114424.1\|1820103_1822128_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
WP_062865652.1\|1822072_1823575_-\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	9.1e-290	99.6
WP_157774581.1\|1823574_1823787_-	hypothetical protein	S5MBY8	Escherichia_phage	1.1e-28	97.1
WP_001077608.1\|1823783_1825907_-\|terminase	phage terminase large subunit family protein	S5MDQ1	Escherichia_phage	0.0e+00	99.0
WP_000373398.1\|1825903_1826380_-	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	1.8e-82	98.7
WP_012816791.1\|1826854_1827040_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001092868.1\|1827558_1828092_-	lysozyme	G9L6J6	Escherichia_phage	1.1e-99	95.5
WP_001457151.1\|1828603_1829089_-	hypothetical protein	NA	NA	NA	NA
WP_000284510.1\|1829092_1829308_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_001290230.1\|1829385_1829631_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
WP_000143458.1\|1829671_1829851_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_062865884.1\|1830001_1831948_-	DUF1737 domain-containing protein	S5MDQ7	Escherichia_phage	0.0e+00	97.8
WP_000738080.1\|1832460_1832730_-	Shiga toxin Stx2c subunit B	Q5TJL5	Enterobacteria_phage	2.1e-43	100.0
WP_001365055.1\|1832741_1833701_-	Shiga toxin Stx2d subunit A	Q6DWN9	Enterobacteria_phage	1.6e-175	100.0
WP_099528381.1\|1834083_1835142_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.9e-193	93.2
WP_000917741.1\|1835293_1835491_-	hypothetical protein	A0A0P0ZDH6	Stx2-converting_phage	8.0e-29	100.0
WP_001367730.1\|1835733_1836264_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.0e-71	71.4
WP_000904149.1\|1836272_1836632_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.3e-36	61.7
WP_099528382.1\|1836644_1837694_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.6e-110	54.9
WP_001341173.1\|1837695_1837968_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.9e-12	50.8
WP_047082286.1\|1838134_1838347_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	7.9e-14	62.9
WP_001224668.1\|1838890_1839073_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.6e-26	95.0
WP_072095369.1\|1839220_1839526_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	5.8e-50	93.1
WP_000017341.1\|1839522_1839840_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.4e-35	75.0
WP_047082289.1\|1839836_1840553_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	8.7e-73	62.1
WP_001379651.1\|1840586_1841009_-	replication protein	A0A0U2JGJ0	Escherichia_phage	5.7e-72	90.0
WP_028985607.1\|1841040_1842072_-	phage replisome organiser	A0A0U2RT81	Escherichia_phage	9.9e-86	69.5
WP_000693925.1\|1842140_1842566_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000887454.1\|1842549_1842822_-	hypothetical protein	H6WRX5	Salmonella_phage	8.5e-13	50.0
WP_000986593.1\|1842930_1843332_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	1.6e-12	53.0
WP_044705396.1\|1843359_1843551_+	hypothetical protein	NA	NA	NA	NA
WP_032351442.1\|1843550_1843838_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_047082292.1\|1844112_1844265_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	4.3e-06	51.1
WP_122993601.1\|1844420_1844678_+	hypothetical protein	I6PDF6	Cronobacter_phage	1.4e-09	84.2
WP_000389971.1\|1844758_1844944_-	hypothetical protein	NA	NA	NA	NA
WP_044808604.1\|1845490_1845679_+	cell division inhibitor	NA	NA	NA	NA
WP_000092782.1\|1845675_1845864_+	DUF1482 family protein	NA	NA	NA	NA
WP_062865829.1\|1845959_1848389_+	exonuclease	A0A192Y6E0	Salmonella_phage	3.6e-54	55.5
WP_000003742.1\|1848450_1848720_+	excisionase	NA	NA	NA	NA
WP_047082091.1\|1848688_1849807_+\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	1.9e-82	43.6
1858041:1858057	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2446074 : 2502158

Enterobacteria_phage(62.07%)

capsid,integrase,lysis,transposase,head,tail,protease,portal,terminase

attL 2454555:2454601|attR 2502172:2502218

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004021921.1\|2446074_2447211_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_001402085.1\|2447479_2449717_+	phage adsorption protein NrfB	NA	NA	NA	NA
WP_000662373.1\|2449703_2452676_+	phage receptor	NA	NA	NA	NA
WP_001224567.1\|2452676_2453567_+	DUF4434 family protein	NA	NA	NA	NA
WP_001177469.1\|2453749_2454511_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
2454555:2454601	attL	NA	NA	NA	NA
WP_001201825.1\|2455023_2455977_+\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_001226378.1\|2456163_2457648_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000937502.1\|2457831_2458137_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
WP_000239874.1\|2458193_2458862_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_120795384.1\|2459227_2459341_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|2459409_2459643_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086514.1\|2459959_2460550_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	7.3e-25	38.8
WP_000885616.1\|2460647_2461223_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
WP_000279163.1\|2461222_2464183_-	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	4.0e-55	53.7
WP_001233071.1\|2464247_2464847_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	4.4e-110	98.5
WP_061091987.1\|2464917_2468331_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	97.6
WP_000090891.1\|2468391_2469024_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_000194780.1\|2468960_2469704_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_001152626.1\|2469709_2470408_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	5.1e-134	99.6
WP_000847379.1\|2470407_2470737_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001774776.1\|2470733_2473313_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.5
WP_000459457.1\|2473305_2473740_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000479193.1\|2473721_2474144_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-60	85.7
WP_001378767.1\|2474159_2474900_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.8e-129	97.2
WP_000683142.1\|2474907_2475303_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	99.2
WP_000975110.1\|2475299_2475878_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.0e-79	97.4
WP_000752994.1\|2475889_2476243_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
WP_000158880.1\|2476254_2476650_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.2e-57	93.9
WP_000063221.1\|2476691_2477717_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.1e-189	97.9
WP_001378764.1\|2477772_2478105_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.2e-54	97.3
WP_032253652.1\|2478114_2479434_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.6e-234	98.9
WP_001369921.1\|2479414_2481016_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.9e-309	98.9
WP_000198149.1\|2481012_2481219_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027283.1\|2481215_2483141_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_063082806.1\|2483115_2483661_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.0e-94	98.3
WP_001415975.1\|2484049_2484244_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	4.3e-27	96.9
WP_000738423.1\|2484603_2484897_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001228695.1\|2484987_2485170_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001135277.1\|2485386_2485884_-	lysozyme	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_000839596.1\|2485883_2486099_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_000737266.1\|2486687_2487785_+	porin	Q1MVN1	Enterobacteria_phage	2.2e-155	76.5
WP_001204791.1\|2487974_2488358_-	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.4e-55	83.3
WP_000971068.1\|2488443_2488584_-	YlcG family protein	K7PHH3	Enterobacteria_phage	5.5e-08	67.4
WP_001099700.1\|2488580_2488943_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	96.5
WP_001570806.1\|2488939_2489230_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_000224914.1\|2489222_2489393_-	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
WP_001053009.1\|2489392_2489848_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	9.2e-60	66.9
WP_072142085.1\|2489844_2489946_-	hypothetical protein	NA	NA	NA	NA
WP_000825400.1\|2490038_2490491_-	hypothetical protein	NA	NA	NA	NA
WP_000720581.1\|2490487_2491048_-	hypothetical protein	NA	NA	NA	NA
WP_000145917.1\|2491533_2491827_-	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_001734999.1\|2491823_2492525_-	replication P family protein	A0A0K2FIT1	Enterobacteria_phage	1.2e-127	97.4
WP_016232481.1\|2492521_2493451_-	replication protein	M1FN81	Enterobacteria_phage	1.6e-111	67.6
WP_001182866.1\|2493537_2494077_-	hypothetical protein	K7PJT7	Enterobacteria_phage	6.8e-62	67.0
WP_000184665.1\|2494107_2494335_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	3.8e-22	69.0
WP_001295669.1\|2494445_2495138_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.5e-109	86.1
WP_000414677.1\|2495219_2495693_+	hypothetical protein	K7PLT9	Enterobacteria_phage	1.3e-53	61.6
WP_001288169.1\|2495689_2496622_+	hypothetical protein	K7PGT0	Enterobacteria_phage	2.8e-87	54.4
WP_000233576.1\|2497106_2497313_+	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000995441.1\|2497388_2497685_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	99.0
WP_001430684.1\|2497690_2498476_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	1.1e-148	99.6
WP_000186833.1\|2498472_2499153_+	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
WP_000682294.1\|2499149_2499311_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	7.7e-22	96.0
WP_000129285.1\|2499303_2499861_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-61	62.3
WP_001386642.1\|2499871_2500153_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000763385.1\|2500251_2500470_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_000488407.1\|2500517_2500796_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000446905.1\|2500767_2501139_+	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	2.1e-46	81.0
WP_001299447.1\|2500994_2502158_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.4e-199	86.3
2502172:2502218	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2845146 : 2864969

uncultured_Caudovirales_phage(50.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157774583.1\|2845146_2846247_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_033882877.1\|2846246_2847383_-\|transposase	ISAs1-like element ISEc1 family transposase	NA	NA	NA	NA
WP_000786991.1\|2847782_2848040_-	hypothetical protein	NA	NA	NA	NA
WP_099528405.1\|2848041_2852562_-	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.1e-22	46.5
WP_000103319.1\|2852637_2854779_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.1e-25	25.0
WP_001142958.1\|2854988_2855507_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000037397.1\|2856203_2856704_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_000123970.1\|2856738_2856963_+	hypothetical protein	NA	NA	NA	NA
WP_000056978.1\|2857013_2858489_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000611742.1\|2858495_2858909_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000393844.1\|2858912_2860763_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_001492738.1\|2860726_2861809_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001113725.1\|2861833_2863114_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_001080149.1\|2863110_2863635_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000246437.1\|2863637_2864969_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_11

3504858 : 3552759

Escherichia_phage(46.67%)

holin,tRNA,integrase,lysis,tail,portal,protease,terminase

attL 3495155:3495169|attR 3550052:3550066

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3495155:3495169	attL	NA	NA	NA	NA
WP_000543828.1\|3504858_3505896_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_000332264.1\|3505984_3507082_+\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	4.3e-212	100.0
WP_001217557.1\|3507143_3507392_+	DinI family protein	S5MQI1	Escherichia_phage	8.3e-39	100.0
WP_001373129.1\|3507661_3508336_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	3.3e-114	90.1
WP_000438829.1\|3508347_3508560_-	hypothetical protein	NA	NA	NA	NA
WP_099528419.1\|3508569_3510228_-\|tail	phage tail protein	S5MDN9	Escherichia_phage	5.9e-72	53.4
WP_000078855.1\|3510371_3510512_-	Hok/Gef family protein	S5M7Q0	Escherichia_phage	8.5e-17	93.5
WP_047091035.1\|3510710_3514397_-	DUF1983 domain-containing protein	S5MW25	Escherichia_phage	0.0e+00	88.0
WP_136754566.1\|3514637_3515270_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	3.7e-99	89.0
WP_047091036.1\|3515215_3515959_-\|tail	phage tail protein	S5MQI8	Escherichia_phage	1.7e-148	98.0
WP_001365876.1\|3515969_3516668_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.4e-131	98.3
WP_000847298.1\|3516667_3516997_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_047087056.1\|3516993_3519639_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.2
WP_000532074.1\|3519682_3519991_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	7.8e-55	100.0
WP_000479054.1\|3520017_3520440_-\|tail	phage minor tail protein G	S5MQJ3	Escherichia_phage	5.1e-73	100.0
WP_000174601.1\|3520455_3521205_-\|tail	phage tail protein	S5M7Q5	Escherichia_phage	4.7e-138	99.6
WP_000682704.1\|3521212_3521611_-	hypothetical protein	S5MW30	Escherichia_phage	2.7e-71	100.0
WP_000974964.1\|3521620_3522247_-	hypothetical protein	S5MBY4	Escherichia_phage	7.8e-102	100.0
WP_001281344.1\|3522249_3522531_-	hypothetical protein	S5MDP9	Escherichia_phage	7.2e-47	100.0
WP_001097058.1\|3522523_3522850_-	DUF2190 family protein	S5MQJ5	Escherichia_phage	6.1e-50	100.0
WP_001114418.1\|3522937_3524962_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	100.0
WP_000974564.1\|3524906_3526409_-\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
WP_000102415.1\|3526408_3526621_-	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_047087055.1\|3526617_3528741_-\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	99.6
WP_000348565.1\|3528737_3529214_-	DUF1441 family protein	Q9EYD0	Enterobacteria_phage	2.1e-83	100.0
WP_032307093.1\|3529666_3530134_-\|lysis	lysis protein	Q7AYI6	Enterobacteria_phage	4.8e-64	86.5
WP_032307092.1\|3530130_3530664_-	lysozyme	Q6H9V6	Enterobacteria_phage	6.9e-99	93.8
WP_000406285.1\|3530788_3531076_+	hypothetical protein	I6S632	Salmonella_phage	1.4e-21	55.8
WP_001371270.1\|3531080_3531308_-	DUF1327 domain-containing protein	Q5G8W5	Enterobacteria_phage	4.6e-12	50.7
WP_032307095.1\|3531335_3531893_-	hypothetical protein	Q08JA0	Stx2-converting_phage	8.9e-49	81.7
WP_000284506.1\|3531896_3532112_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001290230.1\|3532189_3532435_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
WP_000143458.1\|3532475_3532655_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_047086944.1\|3532804_3534751_-	DUF1737 domain-containing protein	Q9EYC8	Enterobacteria_phage	0.0e+00	96.5
WP_000738072.1\|3535263_3535533_-	Shiga toxin Stx2a subunit B	Q6DWN4	Enterobacteria_phage	1.2e-43	100.0
WP_032360617.1\|3535544_3536504_-	Shiga toxin Stx2 subunit A	Q776Q3	Enterobacteria_phage	2.1e-175	99.7
WP_000483502.1\|3536886_3537945_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.0e-206	98.9
WP_000917735.1\|3538096_3538294_-	hypothetical protein	S5MQK8	Escherichia_phage	1.8e-28	98.5
WP_001204806.1\|3538509_3538890_-	antitermination protein Q	S5M7R9	Escherichia_phage	4.9e-67	100.0
WP_001202275.1\|3538907_3539897_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	98.8
WP_001061404.1\|3539904_3540702_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	5.2e-151	100.0
WP_000767113.1\|3540721_3541111_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_000210167.1\|3541107_3541434_-	LexA family transcriptional regulator	S5FXP5	Shigella_phage	2.7e-53	99.1
WP_001355692.1\|3541430_3542084_-	phage N-6-adenine-methyltransferase	A0A0P0ZCC0	Stx2-converting_phage	1.1e-127	100.0
WP_032307264.1\|3542178_3542997_-	helix-turn-helix domain-containing protein	A0A0P0ZCQ6	Stx2-converting_phage	1.1e-119	98.5
WP_032307262.1\|3542993_3543218_-	hypothetical protein	A5LH70	Enterobacteria_phage	3.1e-37	97.3
WP_032307261.1\|3543214_3544366_-	peptidase	A0A0P0ZE80	Stx2-converting_phage	2.6e-212	98.4
WP_000515856.1\|3544362_3544914_-	hypothetical protein	A0A0P0ZE62	Stx2-converting_phage	3.4e-101	100.0
WP_001191670.1\|3544906_3545167_-	helix-turn-helix transcriptional regulator	A0A0P0ZCZ7	Stx2-converting_phage	1.6e-40	100.0
WP_001020631.1\|3545264_3545957_+	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	1.4e-120	95.7
WP_000135680.1\|3546735_3547098_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000081287.1\|3547163_3547988_+	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
WP_000008232.1\|3548115_3548652_+	5'-deoxynucleotidase	S5MW55	Escherichia_phage	7.4e-101	100.0
WP_001242733.1\|3548642_3549005_+	phage protein	S5MC15	Escherichia_phage	1.6e-67	100.0
WP_000111288.1\|3549001_3549205_+	hypothetical protein	K7PLX1	Enterobacteria_phage	4.7e-32	100.0
WP_000476212.1\|3549197_3549437_+	hypothetical protein	S5MQM0	Escherichia_phage	4.4e-37	100.0
WP_001289980.1\|3549433_3549988_+	ead/Ea22-like family protein	S5M7T0	Escherichia_phage	1.8e-102	100.0
WP_001014290.1\|3549989_3550181_+	hypothetical protein	K7PKJ7	Enterobacteria_phage	3.3e-27	98.4
3550052:3550066	attR	NA	NA	NA	NA
WP_001094869.1\|3550183_3550918_+	DUF551 domain-containing protein	S5MC19	Escherichia_phage	2.2e-140	100.0
WP_001061345.1\|3550917_3551490_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.4e-110	100.0
WP_001093917.1\|3551526_3551808_+	hypothetical protein	K7PGU0	Enterobacteria_phage	2.8e-43	96.8
WP_000956557.1\|3552225_3552759_-	hypothetical protein	K7PKJ4	Enterobacteria_phage	1.1e-99	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024291

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024290

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP024289

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection