CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP024520	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed5, complete sequence	0 crisprs	NA	0
NZ_CP024518	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed3, complete sequence	0 crisprs	NA	0
NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	0 crisprs	NA	2
NZ_CP024516	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed1, complete sequence	0 crisprs	csa3,RT	2
NZ_CP024519	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed4, complete sequence	0 crisprs	NA	0
NZ_CP024515	Klebsiella pneumoniae strain KSB1_10J chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,WYL	7

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1728 : 64482

uncultured_Caudovirales_phage(27.78%)

integrase,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001515717.1\|1728_2469_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_032430723.1\|3612_4560_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	2.3e-12	30.6
WP_071527918.1\|4586_4898_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004182026.1\|4962_5886_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	7.1e-176	98.7
WP_004197688.1\|6558_6816_-	hypothetical protein	NA	NA	NA	NA
WP_080895248.1\|7435_8872_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152070.1\|9854_11132_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_004178088.1\|11194_13192_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_085955172.1\|14231_15439_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
WP_004178091.1\|16867_17299_-	silver-binding protein SilE	NA	NA	NA	NA
WP_003032875.1\|17549_19025_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_001572351.1\|19017_19698_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_000475512.1\|19887_21273_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|21301_21655_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_004098959.1\|21768_23061_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_004098958.1\|23071_26218_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_000758228.1\|26304_26745_+	hypothetical protein	NA	NA	NA	NA
WP_023317528.1\|26871_29325_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	9.9e-84	35.5
WP_000843497.1\|29365_29563_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004182013.1\|29596_30334_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|30622_31072_-	copper resistance protein	NA	NA	NA	NA
WP_000925242.1\|31305_33123_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|33122_34019_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|34058_34439_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_004118344.1\|34443_35373_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|35427_36108_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_004152084.1\|36104_37505_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_004152085.1\|37721_38156_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_024623170.1\|38387_38567_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004196769.1\|40309_40819_+	major intrinsic family protein	NA	NA	NA	NA
WP_004196778.1\|40868_41366_-	N-acetyltransferase	NA	NA	NA	NA
WP_004152092.1\|41697_42024_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085921126.1\|42023_42734_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
WP_004182005.1\|42742_43288_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004152095.1\|43363_43726_+	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_004152096.1\|45622_46159_+	N-acetyltransferase	NA	NA	NA	NA
WP_004152097.1\|46191_46617_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
WP_004152098.1\|46629_47919_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_004152099.1\|47966_49718_-	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_004152100.1\|49735_50098_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004152101.1\|50147_50498_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_019725036.1\|50855_51104_+	hypothetical protein	NA	NA	NA	NA
WP_015065504.1\|51100_51673_+	hypothetical protein	NA	NA	NA	NA
WP_009310053.1\|51703_52198_+	hypothetical protein	NA	NA	NA	NA
WP_015065502.1\|52241_52610_+	hypothetical protein	NA	NA	NA	NA
WP_019725040.1\|52643_52847_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_019725034.1\|52860_53091_+	hypothetical protein	NA	NA	NA	NA
WP_019725033.1\|53134_53329_-	hypothetical protein	NA	NA	NA	NA
WP_003026799.1\|53535_53802_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_003026803.1\|53789_54272_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077253535.1\|54479_55826_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004143398.1\|55874_56270_+	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_004152113.1\|57759_58722_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_009483782.1\|58708_59458_-	diguanylate cyclase	NA	NA	NA	NA
WP_004152115.1\|59695_59893_-	hypothetical protein	NA	NA	NA	NA
WP_004152116.1\|59892_62688_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152117.1\|62811_63381_-	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152118.1\|63415_63697_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004118208.1\|63940_64204_-	hypothetical protein	NA	NA	NA	NA
WP_004118209.1\|64218_64482_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

76984 : 162949

Escherichia_phage(33.33%)

transposase,integrase

attL 142244:142303|attR 155895:157955

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072143344.1\|76984_77953_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.0e-173	91.6
WP_000427619.1\|78226_79231_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_004118832.1\|81190_82924_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_004118225.1\|82931_83879_-	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004152278.1\|83923_85528_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118227.1\|85540_86461_-	ABC transporter permease	NA	NA	NA	NA
WP_004118228.1\|86460_87309_-	ABC transporter permease	NA	NA	NA	NA
WP_004118229.1\|87305_87899_-	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004118840.1\|87895_89023_-	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118231.1\|89307_89475_-\|integrase	integrase	NA	NA	NA	NA
WP_004197062.1\|90577_91099_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004197067.1\|91095_92049_+	fec operon regulator FecR	NA	NA	NA	NA
WP_032430169.1\|92141_94466_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_023157913.1\|94510_95413_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004118243.1\|95409_96408_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118246.1\|96404_97361_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004152282.1\|97361_98129_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004118251.1\|98227_98521_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_071785586.1\|98851_99094_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000427619.1\|99391_100396_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_004152286.1\|100982_102065_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_029498501.1\|102186_105261_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.6
WP_023158026.1\|105312_106566_+	lactose permease	NA	NA	NA	NA
WP_003846919.1\|106622_106793_+	hypothetical protein	NA	NA	NA	NA
WP_058350821.1\|107532_107787_-	hypothetical protein	NA	NA	NA	NA
WP_004197675.1\|108811_110455_-	alpha-D-glucose phosphate-specific phosphoglucomutase	A0A1X9I671	Streptococcus_phage	1.5e-22	25.0
WP_023157975.1\|110568_113016_-	glycogen phosphorylase	A0A140XAG6	Dickeya_phage	6.1e-25	69.2
WP_009653212.1\|113034_114468_-	glycogen synthase GlgA	NA	NA	NA	NA
WP_004099051.1\|114556_115840_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_004099052.1\|115969_118162_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
WP_040147694.1\|118579_119482_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.5e-167	99.0
WP_019706030.1\|121194_122199_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|125177_125882_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011977766.1\|126902_127238_-	C2H2-type zinc finger protein	NA	NA	NA	NA
WP_001568067.1\|127410_127692_+	hypothetical protein	NA	NA	NA	NA
WP_000176305.1\|127745_128357_+	DUF2913 family protein	NA	NA	NA	NA
WP_001445937.1\|128541_129498_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|129878_130583_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000427619.1\|132181_133186_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000954592.1\|133367_133544_-	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_001043260.1\|133873_134689_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_001082319.1\|134749_135553_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|135552_136389_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001120891.1\|136360_136900_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000027057.1\|137109_137970_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001235713.1\|138152_138710_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000608644.1\|139273_140536_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|140791_141667_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|141713_142046_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
142244:142303	attL	NA	NA	NA	NA
WP_001067855.1\|144924_145629_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001288432.1\|145947_147381_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|147414_148629_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|148889_149654_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|149796_150063_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|150283_150757_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|150912_151926_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|152471_153176_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_157771845.1\|153209_153830_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.8e-120	100.0
WP_004186977.1\|156017_156722_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	99.6
WP_004186977.1\|158231_158936_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	99.6
155895:157955	attR	NA	NA	NA	NA
WP_099755843.1\|158972_159515_-	chlorite dismutase	NA	NA	NA	NA
WP_001348195.1\|159538_159913_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001515734.1\|159977_160541_-\|transposase	transposase	NA	NA	NA	NA
WP_000046891.1\|160783_161119_+	thermonuclease family protein	G8DH70	Emiliania_huxleyi_virus	2.8e-05	35.7
WP_001067855.1\|162244_162949_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024515_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024515_1

2056418-2056523

Orphan

Consensus_repeat	Method
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024515_1

>merge|NZ_CP024515|1|2056418-2056523|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAGAACAGGTGGCTGAGAGTGCAGGAATGTGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAG

>NZ_CP024515|1|1|2056418-2056523|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAG	AACAGGTGGCTGAGAGTGCAGGAATG
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024515.1\|WP_002910105.1\|2061096_2061999_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_CP024515.1\|WP_002910198.1\|2043715_2044366_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP024515.1\|WP_004148754.1\|2068390_2070025_+\|oligopeptide-ABC-transporter-substrate-binding-protein-OppA	unknown	unknown	gnl\|CDD\|185059
NZ_CP024515.1\|WP_004152249.1\|2055920_2056364_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP024515.1\|WP_002910191.1\|2053532_2054243_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_CP024515.1\|WP_002910095.1\|2067005_2067653_+\|YchE-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236850
NZ_CP024515.1\|WP_002910108.1\|2058893_2059796_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP024515.1\|WP_002910109.1\|2058322_2058781_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
NZ_CP024515.1\|WP_002910201.1\|2042336_2043719_+\|YchO/YchP-family-invasin	unknown	unknown	gnl\|CDD\|236661
NZ_CP024515.1\|WP_002910100.1\|2063089_2063707_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP024515.1\|WP_004175566.1\|2044376_2046155_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
NZ_CP024515.1\|WP_002910193.1\|2052000_2053536_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_CP024515.1\|WP_002910189.1\|2054242_2054920_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_CP024515.1\|WP_004189443.1\|2048260_2052004_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP024515.1\|WP_002910097.1\|2063853_2066529_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP024515.1\|WP_002910103.1\|2062120_2062528_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
NZ_CP024515.1\|WP_004175568.1\|2046466_2047855_+\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_CP024515.1\|WP_040148354.1\|2054916_2055813_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP024515.1\|WP_002910107.1\|2059885_2060899_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_CP024515.1\|WP_004151854.1\|2057437_2058280_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676

Protein	Function_ID	Function_description	E-value
NZ_CP024515.1\|WP_002910105.1\|2061096_2061999_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_CP024515.1\|WP_002910198.1\|2043715_2044366_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
NZ_CP024515.1\|WP_004148754.1\|2068390_2070025_+\|oligopeptide-ABC-transporter-substrate-binding-protein-OppA	gnl\|CDD\|185059	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional.	0
NZ_CP024515.1\|WP_004152249.1\|2055920_2056364_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.05574e-32
NZ_CP024515.1\|WP_002910191.1\|2053532_2054243_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
NZ_CP024515.1\|WP_002910095.1\|2067005_2067653_+\|YchE-family-NAAT-transporter	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	5.03226e-138
NZ_CP024515.1\|WP_002910108.1\|2058893_2059796_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_CP024515.1\|WP_002910109.1\|2058322_2058781_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	7.51559e-107
NZ_CP024515.1\|WP_002910201.1\|2042336_2043719_+\|YchO/YchP-family-invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
NZ_CP024515.1\|WP_002910100.1\|2063089_2063707_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.66434e-117
NZ_CP024515.1\|WP_004175566.1\|2044376_2046155_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
NZ_CP024515.1\|WP_002910193.1\|2052000_2053536_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_CP024515.1\|WP_002910189.1\|2054242_2054920_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
NZ_CP024515.1\|WP_004189443.1\|2048260_2052004_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP024515.1\|WP_002910097.1\|2063853_2066529_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP024515.1\|WP_002910103.1\|2062120_2062528_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79
NZ_CP024515.1\|WP_004175568.1\|2046466_2047855_+\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_CP024515.1\|WP_040148354.1\|2054916_2055813_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.06701e-15
NZ_CP024515.1\|WP_002910107.1\|2059885_2060899_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_CP024515.1\|WP_004151854.1\|2057437_2058280_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176

>NZ_CP024515.1|WP_004152249.1|2055920_2056364_+|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>NZ_CP024515.1|WP_040148354.1|2054916_2055813_-|DMT-family-transporter
MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVKWGWLLLAFGGLVILLSSELTPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFNHALSAVQLLGGMLILFAAAGNNLGWGEKKPRRGGVSEQSRAS
>NZ_CP024515.1|WP_002910189.1|2054242_2054920_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>NZ_CP024515.1|WP_002910191.1|2053532_2054243_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>NZ_CP024515.1|WP_002910193.1|2052000_2053536_+|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>NZ_CP024515.1|WP_004189443.1|2048260_2052004_+|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>NZ_CP024515.1|WP_004175568.1|2046466_2047855_+|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>NZ_CP024515.1|WP_004175566.1|2044376_2046155_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ
>NZ_CP024515.1|WP_002910198.1|2043715_2044366_-|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>NZ_CP024515.1|WP_002910201.1|2042336_2043719_+|YchO/YchP-family-invasin
MPVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTSVSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDGWSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
>NZ_CP024515.1|WP_004151854.1|2057437_2058280_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>NZ_CP024515.1|WP_002910109.1|2058322_2058781_-|YchJ-family-protein
MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>NZ_CP024515.1|WP_002910108.1|2058893_2059796_+|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>NZ_CP024515.1|WP_002910107.1|2059885_2060899_+|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRIHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>NZ_CP024515.1|WP_002910105.1|2061096_2061999_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>NZ_CP024515.1|WP_002910103.1|2062120_2062528_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>NZ_CP024515.1|WP_002910100.1|2063089_2063707_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFDDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCRKHYKEALSVGSLTKVQNQHRPC
>NZ_CP024515.1|WP_002910097.1|2063853_2066529_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>NZ_CP024515.1|WP_002910095.1|2067005_2067653_+|YchE-family-NAAT-transporter
MTQSLFDFSAYFKFFIGLFALVNPVGIIPVFISMTSYQPAAVRNKTNLTANLSVAIILLTSLFLGDGILQIFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSWVHLVGFSLAIAVFALCCWGIFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKALFPGLLS
>NZ_CP024515.1|WP_004148754.1|2068390_2070025_+|oligopeptide-ABC-transporter-substrate-binding-protein-OppA
MTIITKKRLIAAGVLSALIAGNMAMAADVPAGVQLAEKQTLVRNSGAEPQSLDPNKIEGVPEANISRDLFEGLLNTSPKDGHPIPGVAESWDNKDFKVWTFHLRKDAKWSNGEPVTAQDFVYSWQRLVDPKTASPYASYPQYGHIVNVDEIIDGKKAPSELGVKAIDDHTLEVTLSEPVPYFYKLLVNPAMSPVYKPAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVMERNPHYWDNAKTVINTVTWLPTSSEVTYVNRYRSGELDMTYNQLPIELFQKLKKEIPNELHVDPYLCTYYYEINNQKAPFTDVRVRTALKLGLDRDIIANKVKGQGDLPAYGYTPPYTDGAKLSEPEWFTWSQEKRNEEAKKLLAEAGYSADKPLTFNLLYNTSDLHKKLAIAAASLWRKNLGIDVKLVNQEWKTFLDTRHQGTYDVARAGWCADYNEPTSFLNTMLSDSSMNTAHYKSPAFDKIMAESVKASDEAQRTAAYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPMDNVYTKDLYVIKH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1317208 : 1326645

Morganella_phage(57.14%)

integrase

attL 1306472:1306485|attR 1324671:1324684

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1306472:1306485	attL	NA	NA	NA	NA
WP_029602776.1\|1317208_1318477_+\|integrase	site-specific integrase	A0A1W6JPG6	Morganella_phage	3.3e-147	60.8
WP_004866318.1\|1318484_1319438_+	hypothetical protein	NA	NA	NA	NA
WP_004866314.1\|1319564_1319783_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004866312.1\|1319782_1320217_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	8.3e-26	50.0
WP_004866309.1\|1320230_1321040_+	hypothetical protein	A0A0R6PJV6	Moraxella_phage	1.3e-29	53.8
WP_004866306.1\|1321071_1321644_+	hypothetical protein	A0A1W6JPH8	Morganella_phage	8.0e-53	59.0
WP_004866303.1\|1321643_1321823_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_004866300.1\|1321819_1322779_+	ash family protein	A0A291AWU3	Escherichia_phage	3.8e-07	44.3
WP_004866297.1\|1322775_1323036_+	hypothetical protein	NA	NA	NA	NA
WP_004866294.1\|1323032_1323245_+	hypothetical protein	NA	NA	NA	NA
WP_004866292.1\|1323241_1323868_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.2e-24	34.2
WP_004866290.1\|1323882_1326645_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.3e-294	57.4
1324671:1324684	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1672908 : 1679830

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1672908_1673772_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_040147198.1\|1673782_1674571_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-26	37.2
WP_002912636.1\|1674813_1675707_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_040147196.1\|1675952_1677314_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1677632_1678355_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004149058.1\|1678351_1679830_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

1754916 : 1767543

Salmonella_phage(22.22%)

integrase

attL 1746671:1746685|attR 1763216:1763230

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1746671:1746685	attL	NA	NA	NA	NA
WP_004180492.1\|1754916_1757019_+	elongation factor G	E4ZFJ7	Streptococcus_phage	2.2e-63	27.9
WP_040147817.1\|1757235_1758666_-	exodeoxyribonuclease I	NA	NA	NA	NA
WP_040147819.1\|1758840_1760022_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	4.0e-200	83.5
WP_077255481.1\|1760002_1760194_-	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.1e-18	73.8
WP_040147822.1\|1760204_1761611_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	2.5e-209	72.8
WP_040147824.1\|1761651_1762263_+	hypothetical protein	NA	NA	NA	NA
WP_157769347.1\|1762282_1762435_+	hypothetical protein	NA	NA	NA	NA
WP_040147826.1\|1762431_1762728_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	2.1e-25	65.9
WP_040147827.1\|1762727_1762949_-	hypothetical protein	K7PLX1	Enterobacteria_phage	3.4e-20	74.6
WP_040147829.1\|1763033_1763261_-	ANR family transcriptional regulator	NA	NA	NA	NA
1763216:1763230	attR	NA	NA	NA	NA
WP_040147830.1\|1763266_1765333_-	DNA polymerase	Q775A3	Bordetella_phage	1.4e-267	66.7
WP_040147870.1\|1765401_1766886_-	hypothetical protein	Q38324	Lactococcus_phage	3.5e-31	30.1
WP_040147832.1\|1766994_1767543_-	DUF2815 family protein	Q775A5	Bordetella_phage	7.9e-66	64.8

DBSCAN-SWA_4

2662583 : 2669013

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001620097.1\|2662583_2663672_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|2663758_2664019_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2664316_2665177_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2665197_2665959_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_040146162.1\|2666220_2667123_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	4.5e-159	99.3
WP_040146164.1\|2667134_2668400_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.2e-231	98.8
WP_002210516.1\|2668392_2669013_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

2950353 : 2999331

Klebsiella_phage(28.26%)

terminase,tail,integrase,holin

attL 2954390:2954404|attR 3004396:3004410

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040146350.1\|2950353_2951901_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	3.5e-50	87.0
WP_040146353.1\|2951977_2955046_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.2
2954390:2954404	attL	NA	NA	NA	NA
WP_004152651.1\|2955042_2955423_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
WP_057201003.1\|2955432_2955915_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	5.0e-80	93.8
WP_004152649.1\|2956095_2956560_-	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-58	67.8
WP_004152648.1\|2956874_2957210_-	hypothetical protein	NA	NA	NA	NA
WP_040146355.1\|2957293_2960182_-\|tail	tail protein	A0A2H4J107	uncultured_Caudovirales_phage	1.5e-99	32.2
WP_077255779.1\|2960255_2960738_-	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	5.8e-20	51.0
WP_004217333.1\|2960734_2961091_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
WP_077255493.1\|2961167_2961374_-	hypothetical protein	NA	NA	NA	NA
WP_004226994.1\|2961511_2961994_-	hypothetical protein	NA	NA	NA	NA
WP_040146360.1\|2962047_2963220_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	1.2e-23	27.0
WP_004190640.1\|2963243_2963636_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_004217343.1\|2963632_2964184_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-28	39.9
WP_004217344.1\|2964185_2964569_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
WP_040146362.1\|2964555_2964789_-	hypothetical protein	A0A1V0E8A3	Vibrio_phage	9.9e-10	49.2
WP_040146365.1\|2964790_2965201_-	hypothetical protein	A0A0H5AUF0	Pseudomonas_phage	1.7e-09	39.0
WP_040146367.1\|2965204_2965516_-	hypothetical protein	NA	NA	NA	NA
WP_004184463.1\|2965559_2966696_-	hypothetical protein	G8C7P7	Escherichia_phage	2.8e-158	76.5
WP_012967904.1\|2966783_2967548_-	hypothetical protein	G8C7P6	Escherichia_phage	1.5e-75	59.1
WP_040146369.1\|2967654_2968767_-	phage Mu F like family protein	I6PD76	Cronobacter_phage	5.8e-108	53.6
WP_040146371.1\|2968750_2970175_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.4e-193	71.5
WP_040146373.1\|2970179_2971484_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.7e-146	60.0
WP_040146376.1\|2971461_2972466_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	2.9e-34	43.3
WP_004184480.1\|2973024_2973270_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	97.5
WP_040146378.1\|2974477_2974678_-	hypothetical protein	A0A1L6Z528	Klebsiella_phage	2.9e-18	73.3
WP_040146380.1\|2975055_2975235_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.0e-22	92.7
WP_040146381.1\|2975185_2975461_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	1.4e-07	92.1
WP_040146383.1\|2975457_2975805_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.7e-37	74.8
WP_040146384.1\|2975801_2976341_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	8.2e-100	97.2
WP_024176410.1\|2976337_2976637_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-39	83.8
WP_012967891.1\|2977758_2978385_-	YagU family protein	NA	NA	NA	NA
WP_040146385.1\|2978638_2979454_-	molecular chaperone	A0A286N2Q2	Klebsiella_phage	4.7e-107	73.3
WP_040146387.1\|2979450_2979747_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.2e-36	74.0
WP_040146390.1\|2979955_2980555_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	2.9e-90	79.4
WP_040146392.1\|2980612_2980834_-	hypothetical protein	NA	NA	NA	NA
WP_040146395.1\|2980912_2981146_-	DinI-like family protein	K7PM44	Enterobacteria_phage	8.3e-25	68.8
WP_077255780.1\|2981702_2982461_-	RloB domain-containing protein	NA	NA	NA	NA
WP_040146400.1\|2982411_2983677_-	ATP-binding protein	V9QJ85	Oenococcus_phage	3.9e-07	29.3
WP_040146402.1\|2984122_2984326_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	2.1e-24	81.8
WP_040146404.1\|2984322_2984691_-	DUF977 family protein	H6WRX9	Salmonella_phage	8.3e-11	43.0
WP_039103883.1\|2984698_2985448_-	ATP-binding protein	S4TNF5	Salmonella_phage	3.5e-117	81.5
WP_040146481.1\|2985450_2986290_-	hypothetical protein	Q8HA96	Salmonella_phage	1.4e-24	54.0
WP_040146410.1\|2986355_2987150_-	ParB/RepB/Spo0J family partition protein	C7BGF1	Burkholderia_phage	3.4e-62	50.6
WP_004184526.1\|2987279_2987816_-	hypothetical protein	K7PJT7	Enterobacteria_phage	3.0e-62	70.4
WP_071526640.1\|2987818_2988082_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_048230998.1\|2988178_2988535_+	hypothetical protein	NA	NA	NA	NA
WP_040146412.1\|2988963_2989155_+	DUF1482 family protein	NA	NA	NA	NA
WP_012967861.1\|2989163_2989319_+	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	1.2e-14	75.0
WP_040146414.1\|2989456_2992495_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	8.3e-290	57.4
WP_032436020.1\|2992507_2993509_+	enterohemolysin	H6WRX0	Salmonella_phage	1.1e-118	59.6
WP_040146418.1\|2993543_2993897_+	hypothetical protein	NA	NA	NA	NA
WP_040146420.1\|2993889_2994501_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.8e-39	76.3
WP_040146422.1\|2994497_2994806_+	hypothetical protein	I6PD68	Cronobacter_phage	9.3e-24	55.9
WP_004892750.1\|2994813_2995053_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
WP_004892753.1\|2995273_2996461_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	4.2e-120	52.2
WP_004151901.1\|2996637_2997528_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_004140266.1\|2997527_2998520_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_040146427.1\|2998521_2999331_+	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	2.1e-14	33.2
3004396:3004410	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3109882 : 3197533

Klebsiella_phage(43.18%)

capsid,portal,tail,head,terminase,tRNA,integrase

attL 3136697:3136711|attR 3195344:3195358

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004892876.1\|3109882_3110383_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002901080.1\|3110499_3110946_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_002901073.1\|3110929_3111721_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004148041.1\|3111822_3113007_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140471.1\|3113038_3113731_-	CTP synthase	NA	NA	NA	NA
WP_004190885.1\|3113876_3114386_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004150779.1\|3114372_3114729_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_004179368.1\|3114718_3114958_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_040147651.1\|3115258_3116272_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.9e-12	33.8
WP_004150782.1\|3116329_3116431_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_004213093.1\|3116430_3116505_+	protein YoaJ	NA	NA	NA	NA
WP_004140488.1\|3116622_3116748_+	hypothetical protein	NA	NA	NA	NA
WP_004140489.1\|3116807_3117071_-	DUF2534 family protein	NA	NA	NA	NA
WP_004150783.1\|3117201_3117840_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004148038.1\|3117929_3118844_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150784.1\|3119505_3120549_-	type II asparaginase	NA	NA	NA	NA
WP_004140494.1\|3120851_3122060_+	HD domain-containing protein	NA	NA	NA	NA
WP_019705575.1\|3122133_3123918_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150788.1\|3123924_3124815_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004140497.1\|3124935_3126444_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150790.1\|3126754_3127441_-	EAL domain-containing protein	NA	NA	NA	NA
WP_153236426.1\|3127890_3128079_+	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3128057_3128690_-	DNA-binding protein	NA	NA	NA	NA
WP_004140506.1\|3129256_3129454_+	hypothetical protein	NA	NA	NA	NA
WP_004183659.1\|3129568_3130579_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140511.1\|3130575_3131982_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140512.1\|3132037_3132925_-	manganese catalase family protein	NA	NA	NA	NA
WP_004140514.1\|3132941_3133448_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004148027.1\|3133474_3133969_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150795.1\|3134059_3134245_-	general stress protein	NA	NA	NA	NA
WP_004176552.1\|3134867_3136061_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004140530.1\|3136173_3136401_+	DUF1272 domain-containing protein	NA	NA	NA	NA
3136697:3136711	attL	NA	NA	NA	NA
WP_004150797.1\|3136850_3137174_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004150798.1\|3137166_3137559_+	amino acid-binding protein	NA	NA	NA	NA
WP_040147647.1\|3137555_3138269_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004892953.1\|3138541_3138694_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_049115092.1\|3139343_3140036_-	EAL domain-containing protein	NA	NA	NA	NA
WP_032430712.1\|3140391_3141450_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.1e-14	31.1
WP_099743305.1\|3141872_3143297_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	2.3e-96	54.0
WP_099743307.1\|3143359_3156067_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.7
WP_057201155.1\|3156129_3156723_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	2.3e-79	76.6
WP_025368256.1\|3156749_3157172_-	hypothetical protein	J9Q806	Salmonella_phage	2.9e-28	49.3
WP_025368257.1\|3157213_3157924_-	peptidase P60	Q6UAW4	Klebsiella_phage	8.5e-137	90.7
WP_017899000.1\|3157925_3158681_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.9
WP_017898999.1\|3158677_3159016_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.4e-57	88.4
WP_040153917.1\|3159015_3162372_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.3
WP_014228914.1\|3162604_3162970_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_014228913.1\|3163027_3163489_-\|tail	major tail shaft subunit	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_017898997.1\|3163520_3163922_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
WP_017880258.1\|3163918_3164308_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
WP_014228910.1\|3164288_3164627_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
WP_023316689.1\|3164623_3164941_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.6e-45	89.8
WP_014907814.1\|3164921_3165182_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.5e-22	63.9
WP_017898995.1\|3165240_3166527_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	2.0e-216	89.5
WP_017898994.1\|3166604_3167525_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	4.8e-148	87.9
WP_025368259.1\|3167561_3168821_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	9.5e-224	90.5
WP_017898992.1\|3168820_3169000_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_012542167.1\|3168993_3170715_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.1e-190	57.4
WP_012542168.1\|3170714_3171149_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_023316687.1\|3171397_3171829_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.1e-41	62.7
WP_064793022.1\|3171825_3172149_-	hypothetical protein	NA	NA	NA	NA
WP_032440987.1\|3172100_3172463_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	5.2e-58	83.3
WP_032440986.1\|3172624_3172846_-	hypothetical protein	NA	NA	NA	NA
WP_017898986.1\|3174223_3174574_-	hypothetical protein	R9TPM9	Aeromonas_phage	1.8e-10	39.8
WP_032439908.1\|3174570_3175068_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	9.0e-77	82.7
WP_023289178.1\|3175045_3175315_-	hypothetical protein	K7P6H9	Enterobacteria_phage	4.2e-36	85.9
WP_077264777.1\|3176329_3176773_+	hypothetical protein	NA	NA	NA	NA
WP_032440985.1\|3176774_3177644_+	hypothetical protein	NA	NA	NA	NA
WP_023316683.1\|3177672_3178017_-	hypothetical protein	A0A0P0ZCW0	Stx2-converting_phage	1.8e-55	85.0
WP_023316682.1\|3178029_3179061_-	DUF968 domain-containing protein	S5MW46	Escherichia_phage	1.2e-96	49.6
WP_099743309.1\|3179260_3179653_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
WP_099743311.1\|3179693_3179984_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
WP_048297249.1\|3179995_3180229_-	DinI family protein	K7PM44	Enterobacteria_phage	2.6e-26	73.7
WP_099743354.1\|3181369_3182275_-	hypothetical protein	NA	NA	NA	NA
WP_099743312.1\|3182298_3182901_-	hypothetical protein	NA	NA	NA	NA
WP_099743314.1\|3182911_3183673_-	TIGR04255 family protein	NA	NA	NA	NA
WP_099743316.1\|3183881_3184229_-	hypothetical protein	NA	NA	NA	NA
WP_099743317.1\|3184225_3184873_-	morphogenetic protein	M1F3E2	Salmonella_phage	5.7e-63	54.6
WP_072383098.1\|3184865_3185210_-	hypothetical protein	NA	NA	NA	NA
WP_032709977.1\|3185212_3185464_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_099743319.1\|3185513_3185978_-	replication protein	A0A0U2JGJ0	Escherichia_phage	5.3e-63	71.5
WP_077273825.1\|3185970_3186975_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	2.1e-32	40.9
WP_094354843.1\|3187034_3187589_-	hypothetical protein	NA	NA	NA	NA
WP_071561166.1\|3187591_3187816_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
WP_099743321.1\|3187905_3188334_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.2e-37	58.0
WP_040234937.1\|3188663_3188978_-	hypothetical protein	NA	NA	NA	NA
WP_032735208.1\|3189368_3189563_+	DUF1482 family protein	NA	NA	NA	NA
WP_014228879.1\|3189605_3189950_+	transcriptional regulator	NA	NA	NA	NA
WP_099743322.1\|3190091_3192230_+	exonuclease	S4TNL0	Salmonella_phage	3.3e-99	42.3
WP_012542206.1\|3192282_3192528_+	excisionase	NA	NA	NA	NA
WP_017898966.1\|3192508_3193636_+\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	3.3e-119	58.4
WP_004150800.1\|3193753_3195004_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_040147613.1\|3195244_3195895_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3195344:3195358	attR	NA	NA	NA	NA
WP_040147612.1\|3195911_3196370_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3196426_3197533_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_7

3442286 : 3451760

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004209699.1\|3442286_3444008_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3444052_3444754_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3445107_3445326_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3445456_3447736_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3447766_3448084_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3448409_3448631_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3448707_3450648_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3450644_3451760_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP024517

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7982 : 18728

Salmonella_phage(40.0%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099745222.1\|7982_8303_+	hypothetical protein	J9Q750	Salmonella_phage	2.5e-27	50.0
WP_099745223.1\|8382_8697_+	hypothetical protein	NA	NA	NA	NA
WP_099745224.1\|8819_9056_+	hypothetical protein	S5MQM0	Escherichia_phage	1.0e-22	76.7
WP_099745225.1\|9236_9455_+	hypothetical protein	R9TRD3	Aeromonas_phage	3.7e-19	65.2
WP_099745226.1\|9548_10046_+	hypothetical protein	A0A076G835	Escherichia_phage	5.0e-27	56.2
WP_099745227.1\|10042_10231_+	hypothetical protein	NA	NA	NA	NA
WP_099745231.1\|12226_12442_+	hypothetical protein	NA	NA	NA	NA
WP_099745232.1\|12488_12992_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.6e-25	67.5
WP_099745339.1\|13022_13538_+	DUF262 domain-containing protein	A0A2H4FWH2	Salmonella_phage	1.7e-65	68.2
WP_099745233.1\|13534_14422_+	hypothetical protein	A0A248SKW5	Klebsiella_phage	1.3e-20	54.4
WP_099745340.1\|14421_14616_+	hypothetical protein	NA	NA	NA	NA
WP_157769349.1\|14917_15091_+	hypothetical protein	NA	NA	NA	NA
WP_004197207.1\|15174_15447_+	hypothetical protein	I7B2L9	Escherichia_phage	1.5e-12	48.9
WP_099745234.1\|15727_16015_+	hypothetical protein	NA	NA	NA	NA
WP_004197199.1\|16471_16996_+	hypothetical protein	NA	NA	NA	NA
WP_004197222.1\|17059_17827_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	3.5e-43	62.7
WP_099745235.1\|18278_18728_+\|tail	phage tail protein	A0A1I9KFG8	Aeromonas_phage	1.3e-18	42.9

DBSCAN-SWA_2

188828 : 196811

Burkholderia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099745319.1\|188828_189407_+	HNH endonuclease	W0LI46	Edwardsiella_phage	1.2e-40	56.2
WP_032719502.1\|189397_189712_-	hypothetical protein	NA	NA	NA	NA
WP_099745320.1\|189836_190415_+	DNA-binding protein	Q1MVE8	Enterobacteria_phage	3.2e-57	55.3
WP_032719501.1\|190430_190790_-	hypothetical protein	NA	NA	NA	NA
WP_099745321.1\|191020_191458_+	hypothetical protein	NA	NA	NA	NA
WP_099745323.1\|191716_191977_+	hypothetical protein	A0A0M3LSW2	Mannheimia_phage	4.5e-11	45.9
WP_099745324.1\|192009_192444_+	hypothetical protein	NA	NA	NA	NA
WP_032719495.1\|192528_192858_+	hypothetical protein	A0A060D1I0	Salmonella_phage	4.3e-11	62.2
WP_099745325.1\|192929_194345_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.5e-105	51.1
WP_099745326.1\|194436_195639_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	38.6
WP_099745327.1\|196217_196466_+	hypothetical protein	NA	NA	NA	NA
WP_099745328.1\|196493_196811_+	DUF3846 domain-containing protein	A0A2H4P7A4	Pseudomonas_phage	3.0e-09	46.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024516

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP024517

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection