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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024533 Klebsiella pneumoniae strain INF157 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024532 Klebsiella pneumoniae strain INF157 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024529 Klebsiella pneumoniae strain INF157 plasmid unnamed1, complete sequence 0 crisprs DEDDh 0 0 3 0
NZ_CP024530 Klebsiella pneumoniae strain INF157 plasmid unnamed2, complete sequence 0 crisprs csa3,RT 0 0 1 0
NZ_CP024528 Klebsiella pneumoniae strain INF157 chromosome, complete genome 1 crisprs csa3,cas3,DEDDh,DinG,RT,WYL 0 0 6 0
NZ_CP024531 Klebsiella pneumoniae strain INF157 plasmid unnamed3, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP024534 Klebsiella pneumoniae strain INF157 plasmid unnamed6, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP024531
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6364 : 67876 53 Escherichia_phage(44.83%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP024529
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 24187 : 50033 33 Escherichia_phage(38.46%) transposase NA
DBSCAN-SWA_2 111477 : 132108 18 Salmonella_phage(33.33%) transposase,integrase attL 114743:114756|attR 131371:131384
DBSCAN-SWA_3 135446 : 189343 57 Escherichia_phage(28.57%) transposase,integrase attL 136215:136274|attR 195227:195363

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP024528
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024528_1 4449916-4450010 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 452038 : 524028 72 uncultured_Caudovirales_phage(55.0%) protease,portal,capsid,terminase,transposase,tail,head,tRNA,integrase attL 469646:469663|attR 486947:486964
DBSCAN-SWA_2 1993991 : 2050258 50 Staphylococcus_phage(20.0%) protease,transposase,plate NA
DBSCAN-SWA_3 2724144 : 2735031 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_4 2963237 : 3055473 109 uncultured_Caudovirales_phage(26.56%) terminase,transposase,integrase attL 2953866:2953883|attR 3063913:3063930
DBSCAN-SWA_5 3432707 : 3527319 94 Salmonella_phage(57.63%) protease,lysis,portal,capsid,terminase,transposase,plate,head,tRNA,tail,integrase attL 3489894:3489912|attR 3527394:3527412
DBSCAN-SWA_6 4179573 : 4191227 13 Enterobacteria_phage(70.0%) integrase attL 4180023:4180037|attR 4203080:4203094

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP024530
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1727 : 64517 59 uncultured_Caudovirales_phage(27.78%) integrase,transposase,protease NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage