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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024574 Klebsiella pneumoniae strain INF274 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024571 Klebsiella pneumoniae strain INF274 plasmid unnamed1, complete sequence 0 crisprs DEDDh 0 0 2 0
NZ_CP024570 Klebsiella pneumoniae strain INF274 chromosome, complete genome 1 crisprs csa3,cas3,RT,DEDDh,DinG,WYL 0 0 7 0
NZ_CP024573 Klebsiella pneumoniae strain INF274 plasmid unnamed3, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP024575 Klebsiella pneumoniae strain INF274 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024572 Klebsiella pneumoniae strain INF274 plasmid unnamed2, complete sequence 0 crisprs csa3,RT 0 0 1 0

Results visualization

1. NZ_CP024570
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024570_1 4446141-4446235 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 453139 : 525129 72 uncultured_Caudovirales_phage(55.0%) transposase,capsid,protease,tail,head,tRNA,portal,terminase,integrase attL 470747:470764|attR 488048:488065
DBSCAN-SWA_2 1642430 : 1685215 42 Escherichia_phage(21.05%) protease,integrase,transposase attL 1669702:1669761|attR 1675613:1676270
DBSCAN-SWA_3 1718148 : 1756614 56 uncultured_Caudovirales_phage(34.04%) terminase,integrase attL 1716229:1716243|attR 1725169:1725183
DBSCAN-SWA_4 1984820 : 1995707 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_5 2665142 : 2726215 55 Microcystis_phage(20.0%) protease,transposase,tRNA,plate NA
DBSCAN-SWA_6 3428932 : 3523544 94 Salmonella_phage(57.63%) transposase,capsid,protease,tail,head,tRNA,portal,terminase,lysis,plate,integrase attL 3486119:3486137|attR 3523619:3523637
DBSCAN-SWA_7 4175798 : 4187452 13 Enterobacteria_phage(70.0%) integrase attL 4176248:4176262|attR 4199305:4199319
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP024573
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6364 : 68704 54 Escherichia_phage(46.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP024571
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 24187 : 66066 49 Escherichia_phage(35.71%) transposase NA
DBSCAN-SWA_2 110090 : 183446 75 Escherichia_phage(14.29%) transposase,integrase attL 121682:121703|attR 163699:163720
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP024572
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1727 : 64517 59 uncultured_Caudovirales_phage(27.78%) transposase,integrase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage