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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024576 Acinetobacter baumannii strain AbPK1 chromosome, complete genome 3 crisprs csa3,cas3,DEDDh,WYL,RT 1 0 9 0
NZ_CP024577 Acinetobacter baumannii strain AbPK1 plasmid pAbPK1a, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024578 Acinetobacter baumannii strain AbPK1 plasmid pAbPK1b, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP024576
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024576_1 460711-460905 Unclear NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024576_2 2564680-2564877 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024576_3 2765703-2765788 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP024576_1 1.2|460792|39|NZ_CP024576|CRT 460792-460830 39 NZ_CP024576.1 460879-460917 1 0.974

1. spacer 1.2|460792|39|NZ_CP024576|CRT matches to position: 460879-460917, mismatch: 1, identity: 0.974

gagttcaactcagatcgtccacgtcgtgaaggtggtttt	CRISPR spacer
gagttcaactcagatcgtccacgccgtgaaggtggtttt	Protospacer
***********************.***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1174727 : 1215505 52 Pseudomonas_phage(21.88%) transposase,plate,capsid,head,integrase,tail attL 1169278:1169294|attR 1218844:1218860
DBSCAN-SWA_2 1240688 : 1296039 74 Acinetobacter_phage(90.32%) tail,capsid,transposase,terminase NA
DBSCAN-SWA_3 1300338 : 1308271 8 Acinetobacter_phage(85.71%) transposase NA
DBSCAN-SWA_4 1375151 : 1397802 36 Acinetobacter_phage(70.97%) capsid,terminase NA
DBSCAN-SWA_5 1406961 : 1419583 13 Acinetobacter_phage(30.0%) NA NA
DBSCAN-SWA_6 1566472 : 1648152 117 Acinetobacter_phage(90.62%) integrase,capsid,transposase,terminase attL 1559446:1559460|attR 1645831:1645845
DBSCAN-SWA_7 2527207 : 2567067 52 Acinetobacter_phage(40.0%) transposase,terminase,head,capsid,integrase,tail,portal,protease attL 2532246:2532267|attR 2567204:2567225
DBSCAN-SWA_8 3053010 : 3076384 29 Acinetobacter_phage(66.67%) integrase,transposase attL 3047627:3047642|attR 3087185:3087200
DBSCAN-SWA_9 3749860 : 3799996 47 Staphylococcus_phage(16.67%) integrase,tRNA,transposase attL 3785975:3785989|attR 3802071:3802085
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP024578
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9069 : 17610 9 Escherichia_phage(14.29%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage