CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024591	Porphyromonas gingivalis strain KCOM 2802 chromosome, complete genome	6 crisprs	Csx27,RT,PD-DExK,DEDDh,cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas6,cas5,cas8b4,cas7b,cas3,cas4,cas13b,Csx28	1	6	167	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024591_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_1

209107-209472

TypeVI-B2,TypeVI-B1

VI-B1

Consensus_repeat	Method
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CRISPRCasFinder
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	CRT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	PILER-CR

5 spacers

cas13b,Csx27

The CRISPR arrays of NZ_CP024591_1

>merge|NZ_CP024591|1|209107-209472|CRISPRCasFinder,CRT,PILER-CR
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACTAAATAAAGGCGTGTTGCGACAAATAAAATGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACGCATGCTCTTCAAACAAGATGGACGTAACAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACACCAAGACTTAATCAAAGAAATAACGAGAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACGGAAAGGTACTTACACTACCTCGGGAACAAGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAACTGATTTACAATAGATTTAACTATTATATGGGTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>NZ_CP024591|1|1|209107-209472|CRISPRCasFinder
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TAAATAAAGGCGTGTTGCGACAAATAAAAT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCATGCTCTTCAAACAAGATGGACGTAACA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	ACCAAGACTTAATCAAAGAAATAACGAGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GGAAAGGTACTTACACTACCTCGGGAACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TGATTTACAATAGATTTAACTATTATATGG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>NZ_CP024591|1|1|209107-209472|CRT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TAAATAAAGGCGTGTTGCGACAAATAAAAT
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCATGCTCTTCAAACAAGATGGACGTAACA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	ACCAAGACTTAATCAAAGAAATAACGAGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GGAAAGGTACTTACACTACCTCGGGAACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TGATTTACAATAGATTTAACTATTATATGG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

>NZ_CP024591|1|1|209173-209472|PILER-CR
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GCATGCTCTTCAAACAAGATGGACGTAACA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	ACCAAGACTTAATCAAAGAAATAACGAGAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	GGAAAGGTACTTACACTACCTCGGGAACAA
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	TGATTTACAATAGATTTAACTATTATATGG
GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_099777251.1\|203460_204471_-\|cobalamin-biosynthesis-protein-CobD	unknown	unknown	gnl\|CDD\|377002
NZ_CP024591.1\|WP_088223831.1\|209479_212887_-\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NZ_CP024591.1\|WP_099777951.1\|215781_216522_+\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP024591.1\|WP_099777258.1\|221434_222028_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275301
NZ_CP024591.1\|WP_021663192.1\|206977_207544_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP024591.1\|WP_004584295.1\|217891_218476_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224473
NZ_CP024591.1\|WP_004584372.1\|202533_202986_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224108
NZ_CP024591.1\|WP_005873459.1\|222047_222467_-\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_CP024591.1\|WP_099777252.1\|204484_205492_-\|threonine-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|273466
NZ_CP024591.1\|WP_005873518.1\|212883_213600_-\|hypothetical-protein	Csx27	-	unknown
NZ_CP024591.1\|WP_099777253.1\|205484_206981_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
NZ_CP024591.1\|WP_004584294.1\|218586_219060_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP024591.1\|WP_099777254.1\|207566_208886_-\|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
NZ_CP024591.1\|WP_004584373.1\|201494_202550_+\|glycosyltransferase-family-9-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP024591.1\|WP_005873633.1\|198942_200091_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
NZ_CP024591.1\|WP_099777255.1\|214589_215462_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP024591.1\|WP_099777257.1\|219394_221413_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP024591.1\|WP_099777256.1\|216518_217886_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|224062
NZ_CP024591.1\|WP_099777250.1\|200805_201411_+\|DUF4254-domain-containing-protein	unknown	unknown	gnl\|CDD\|379447
NZ_CP024591.1\|WP_043900827.1\|200229_200646_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_099777251.1\|203460_204471_-\|cobalamin-biosynthesis-protein-CobD	gnl\|CDD\|377002	pfam03186, CobD_Cbib, CobD/Cbib protein. This family includes CobD proteins from a number of bacteria, in Salmonella this protein is called Cbib. Salmonella CobD is a different protein. This protein is involved in cobalamin biosynthesis and is probably an enzyme responsible for the conversion of adenosylcobyric acid to adenosylcobinamide or adenosylcobinamide phosphate.	2.39234e-121
NZ_CP024591.1\|WP_088223831.1\|209479_212887_-\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
NZ_CP024591.1\|WP_099777951.1\|215781_216522_+\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	3.036e-46
NZ_CP024591.1\|WP_099777258.1\|221434_222028_-\|radical-SAM-protein	gnl\|CDD\|275301	TIGR04508, queE_Cx14CxxC, 7-carboxy-7-deazaguanine synthase, Cx14CxxC type. In the pathway of 7-cyano-7-deazaquanine (preQ0) biosynthesis, the radical SAM enzyme QueE is quite variable. This model describes a variant form in which the three-Cys motif that binds the signature 4Fe-4S cluster takes the form Cx14CxxC, as in Burkholderia multivorans ATCC 17616. The crystal structure is known.	1.74077e-45
NZ_CP024591.1\|WP_021663192.1\|206977_207544_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	4.01688e-77
NZ_CP024591.1\|WP_004584372.1\|202533_202986_+\|hypothetical-protein	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.04037e-10
NZ_CP024591.1\|WP_005873459.1\|222047_222467_-\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	1.13255e-25
NZ_CP024591.1\|WP_099777252.1\|204484_205492_-\|threonine-phosphate-decarboxylase	gnl\|CDD\|273466	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see pfamAM:pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	1.20539e-115
NZ_CP024591.1\|WP_004584295.1\|217891_218476_+\|hypothetical-protein	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	4.89926e-18
NZ_CP024591.1\|WP_099777253.1\|205484_206981_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
NZ_CP024591.1\|WP_004584294.1\|218586_219060_-\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	4.83078e-11
NZ_CP024591.1\|WP_099777254.1\|207566_208886_-\|cobyrinate-a,c-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	5.83296e-178
NZ_CP024591.1\|WP_004584373.1\|201494_202550_+\|glycosyltransferase-family-9-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.34696e-44
NZ_CP024591.1\|WP_005873633.1\|198942_200091_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	5.43351e-180
NZ_CP024591.1\|WP_099777257.1\|219394_221413_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	6.11493e-31
NZ_CP024591.1\|WP_099777256.1\|216518_217886_+\|lactate-utilization-protein	gnl\|CDD\|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	9.47494e-138
NZ_CP024591.1\|WP_099777250.1\|200805_201411_+\|DUF4254-domain-containing-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	1.62811e-83
NZ_CP024591.1\|WP_099777255.1\|214589_215462_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.15622e-58

>NZ_CP024591.1|WP_099777254.1|207566_208886_-|cobyrinate-a,c-diamide-synthase
MSVPIKRSHLLISAASSGGGKTTFTLGLLRLLRRRGLKVQPFKCGPDYIDPKYHRLACGTETVNLDAFMMSREHIARLYDRYGCEADVSIVEGVMGLFDGYDRMTGSSALLAENLRIPVLLLIHAGSTAYSVAPILYGFKHFRPGVAPVGVVFNKVGSASHYRYLEEAAADAGVASLGYLPKMKDLEVPSRHLGLSVEDLARYDYLPDRVADAIEKYVDVERLLGLMASDVDPVIEEESFTESSLHGRKCIAMADDEAFNFTYRENIRRLESRGRVVRFSPLRDNRLPDDCDFLYLPGGYPEFYLPALSANASMKQSVRDYIESGGHALAECGGMMYLCDTIRGMDGRDYPMCGVLSEAATMEGMRLHLGYRRMVYKGKELRGHEFHYSSTIGSTPSVAQQYNVRGEAVETPLYRYKNLLAGYTHLYWGEHDDLWTWFD
>NZ_CP024591.1|WP_021663192.1|206977_207544_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MIYTKTGDKGTTGIFGGERVPKDDVRVEAYGTMDELNAAIGMIRTFLPEEDERQTVLYDIQMRMMAAMSIVATPAGKREQNPNHFPEEAAADCEAFIDRLLGETADNGYFILPGGTPLSAHLQLARTIARRVERRLWTLHRSDEVPDAILKWMNRLSDLFFVMARHEMQQQGWSEEKWHRFAYKRKKK
>NZ_CP024591.1|WP_099777253.1|205484_206981_-|cobyric-acid-synthase
MTEGGKLRPIMFVGTGSDVGKSIIATGFCRIFRQDGYHPAPFKAQNMALNSFVTPEGLEIGRAQAVQAEAAGIPCHTDMNPVLLKPSSDHTSQIVLNGRPIGNRDAYEYFRREGRDELRTEVYAAFDRLASRFGPVVMEGAGSISELNLRDTDIVNMPMAIHAGACVILVADIDRGGVFASVYGSIMLLSAEERKYVRGIMINKFRGDLRLFDEGKKILEELCGIPVVGVIPYYKDIHIEEEDSVALSVKQYAAGQGRVNVAVVLLRYLSNYTDFNVLERDPRVHLYYTNNTEELRKADIIILPGSKSTLADLYELRRNGAAQAIVQAHRDGTTVLGICGGFQLMGMEVCDPDHIEGDIERLPGLGLLPVTTVMTGEKVTRRTAFRFLDHTDECEGYEIHMGRTMPVEGAASSPLNRLSDGTEDGYFVDATCMGTYVHGILDNPAVIDYLLSPYADKMEERKSFDYVRYKDEQYDKLADHLRRYADVPLIYQLMKDDD
>NZ_CP024591.1|WP_099777252.1|204484_205492_-|threonine-phosphate-decarboxylase
MIKGHGDDLYRHGPIRANFSSNVYNATERQGLLDHLHKRLDSIGSYPEPEPYSLEKGLADYHGIAADSISVTSGATEAIYLIAQAFRGSSSAVVVPTFSEYADACRLHGHGVDFISKPEEASSRYDMVWLCNPNNPTGRVWKASELYRIVRECPSTIFIVDQSYEYFSIAEVLDTKEAVSLPNLLLLHSLTKRFAIPGLRLGYLTAHASLTERIRVCRMPWSVNALAIAAGEYLVQQGFPTSIPLAELHAETERLRTAIGSMAGYEVEPTDTHFMLVRCRHHSAADLKAVLADQYGLLIRDASNFEGLDTHCIRIATQTREQNDWLIDALRSISF
>NZ_CP024591.1|WP_099777251.1|203460_204471_-|cobalamin-biosynthesis-protein-CobD
MQGSVLILLLFLLPLLLGWLADYFLGDPLSLPHPIVGFGRMIAFGEKRLNKGNYRKVKGAFMSVFYIVAVFLLTLLILLGLVFVCVYTILLDDFFRIAVAFAVASLILAIGIFFCLAGTTLIREVRMVFEAVDRSLEEGRKQVTRIVGRDTAALSAQEVRTAALETLSENLSDGVVAPMFWYMWLGLPGMMAYKMINTLDSMIGYKTARYFLFGRIAAKIDDVANYIPARLTAWLMILVSGKLHLFSFVRRYGRQHASPNSGYPEAALAGILNCRFGGTHDYFGESISKPYIGYNERELATADMQIAIRINRRVELVMLLLTFVVSWITSSLFLFA
>NZ_CP024591.1|WP_004584372.1|202533_202986_+|hypothetical-protein
MKLRINKLISDAGLGSRREAEKYITEGRVKINGRIARLTDLVCEKDIVLLDDIDIPIKDLIREEISLRKYEERLAPSASNQGRQDEKRKNPRPKQHKEVPSQRNAGKPRSESRIRNRWEEGDEDDFDFDTGRGFRKGNRKNDSSVKKFRH
>NZ_CP024591.1|WP_004584373.1|201494_202550_+|glycosyltransferase-family-9-protein
MARYLIVRLSAIGDVAMTIPVLYAVAKAYPQHSFTLLTQPFLTSLLINPPNNLEGMGIDIKHEESSLVGLLTYIGRLKDEQFDYVIDLHNVIRSKIIRFYLRFFGVKGFSLKKPRLQLRQLTAKPPKKPTRLPSVIERYAQVFHKAGLEIHPPYPILLNDSGHISTELPIVEIGSGHHLIGIAPFAGHEAKTYPPEKMHEVVRTLAERDDVQIFLFGGKGKEKNILEQWADESPRIVSVAGLLSLPEELSLIHALRCMVSMDSANMHFASLVGTRVISIWCATHPAAGFLGYGQRIEDCIGADLDCRPCSVFGNKPCFRKDYACRTQIEPQLIINKIVSTLTDLNSDETEN
>NZ_CP024591.1|WP_099777250.1|200805_201411_+|DUF4254-domain-containing-protein
MTISKLCNRIFAEAIQAYNVTDSVDAPCNNPYRPQTIEHYLFLKNWIDNAQWHLEDIIRDPNIDPADALVIKRRIDKSNQDRTDLVELIDSYFLDTYKDVKVLPDATINTESPAWAIDRLSILKLKIHNMRLATERPDADDAHRAKCQEKLRVLIEQDADLCTAIDQLVDDIAAGRKYMKVYKQMKMYNDPSLNPILLGKR
>NZ_CP024591.1|WP_043900827.1|200229_200646_+|hypothetical-protein
MRKIVVTALMGIGLLVGTTVNAQTQKKVETAKTEQTVKKQECTHHHDKACDAKKAGESCKDKAKDAKDCCKDKAKDANAKDCSKDKSKDCKKSDCHKSEKGECKSKHGHKSCEGKGKDKAEAGNCPHAKKHEKATDKQ
>NZ_CP024591.1|WP_005873633.1|198942_200091_+|iron-containing-alcohol-dehydrogenase
MNNFKFKNPTELIFGQGMIKELPKRVPAGVPVLVTFGSGSVRYNGVYRAVKDALEGYDLVEFWGIESNPKIETLRKAIAMGKEHNCQFVLAVGGGSVIDGSKLIAAAIPYEGDAWELVLKGYSRDTILPLGTVLTIPATGSEMNSGAIISREETKEKLVFRGNFPVFSILDPEVTFSLPPYQIACGLADSFVHVIEQYITTPGQSRLMDRWAESIMLTLKEIAPLIRENPHSYDLMADFMLCATMALNGFIAMGVTQDWATHMIGHEITALTGLTHGHTLAIVLPGTLRTLGHDHKREKMLQYAERIWDIKEGTEEERIDAAIARTEEFFRELGLKTRLEEMHIGSDVIKEIERRFIERGVSYGEALDVDGPMARRILEACR
>NZ_CP024591.1|WP_088223831.1|209479_212887_-|hypothetical-protein
MNTVPASENKGQSRTVEDDPQYFGLYLNLARENLIEVESHVRIKFGKKKLNEESLKQSLLCDHLLSVDRWTKVYGHSRRYLPFLHYFDPDSQIEKDHDSKTGVDPDSAQRLIRELYSLLDFLRNDFSHNRLDGTTFEHLEVSPDISSFITGTYSLACGRAQSRFADFFKPDDFVLAKNRKEQLISVADGKECLTVSGLAFFICLFLDREQASGMLSRIRGFKRTDENWARAVHETFCDLCIRHPHDRLESSNTKEALLLDMLNELNRCPRILYDMLPEEERAQFLPALDENSMNNLSENSLNEESRLLWDGSSDWAEALTKRIRHQDRFPYLMLRFIEEMDLLKGIRFRVDLGEIELDSYSKKVGRNGEYDRTITDHALAFGKLSDFQNEEEVSRMISGEASYPVRFSLFAPRYAIYDNKIGYCHTSDPVYPKSKTGEKRALSNPQSMGFISVHDLRKLLLMELLCEGSFSRMQSGFLRKANRILDETAEGKLQFSALFPEMRHRFIPPQNPKSKDRREKAETTLEKYKQEIKGRKDKLNSQLLSAFDMNQRQLPSRLLDEWMNIRPASHSVKLRTYVKQLNEDCRLRLRKFRKDGDGKARAIPLVGEMATFLSQDIVRMIISEETKKLITSAYYNEMQRSLAQYAGEENRRQFRAIVAELHLLDPSSGHPFLSATMETAHRYTEDFYKCYLEKKREWLAKTFYRPEQDENTKRRISVFFVPDGEARKLLPLLIRRRMKEQNDLQDWIRNKQAHPIDLPSHLFDSKIMELLKVKDGKKKWNEAFKDWWSTKYPDGMQPFYGLRRELNIHGKSVSYIPSDGKKFADCYTHLMEKTVQDKKRELRTAGKPVPPDLAADIKRSFHRAVNEREFMLRLVQEDDRLMLMAINKMMTDREEDILPGLKNIDSILDEENQFSLAVHAKVLEKEGEGGDNSLSLVPATIEIKSKRKDWSKYIRYRYDRRVPGLMSHFPEHKATLDEVKTLLGEYDRCRIKIFDWAFALEGAIMSDRDLKPYLHESSSREGKSGEHSTLVKMLVEKKGCLTPDESQYLILIRNKAAHNQFPCAAEMPLIYRDVSAKVGSIEGSSAKDLPEGSSLVDSLWKKYEMIIRKILPILDPENRFFGKLLNNMSQPINDL
>NZ_CP024591.1|WP_005873518.1|212883_213600_-|hypothetical-protein
MEKFSLYDFLAIILPGIAFIVVFRIIFSSLHLSLPVDIPLGLESTIVYALICGAVLYVLSFSLVKLFPRLFGLYRHVADLYQKMKALHPIMNDTLNRQAERWGLGKIYLSEEEFCQSEEKEKIRMLQSDFYDRMWYRLDFRGKLGSAKSFQCYYFFFRHSFWGLVLISLILLSYKLLAYIPACDMEDIGWREYSDIAVPIMILSALFVFLAQWFRIKMVEKMYWTFYISLIEQENSNL
>NZ_CP024591.1|WP_099777255.1|214589_215462_+|phosphoserine-phosphatase-SerB
MNGDYRIYIMAARADLLHVAAVCRAVEAIGARVVQFVREADTYDPCVRLSVAYKRAKSLLIKALMPMARTYPIMLGIRREDTPVGRIGLVAFDLDSTLVRTEIMNELATAHGCLDEMGELTEAAMSGREEFPDNFSRRVSMLRGLPLAKLEELSASLPIVEGLSSLMRKFKEQGIRSAIISGGFRLYSHNIKERYGFDYICTSEAEVKDGLLTGRLSGTIVDAKVKAEFLRSLAKELSLTPAEIVAVGDGANDVPMLDFSAGSIIFNSSAHPPSMPQLRIEAILQFMGCR
>NZ_CP024591.1|WP_099777951.1|215781_216522_+|(Fe-S)-binding-protein
MKVGLFIPCYVNAVYPEVGIATYKLLKSLDIDVDYPMDQTCCGQPMANAGFEQKAQKLALRFEELFESYDVVVGPSASCVAFVKENYDHILRPTGHVCKSAAKVRDICEFLHDDLKITSLPSRFAHKVSLHNSCHGVRELHLSIPSEVHRPYLNKVRRLLEMVQGIEVFEPKRIDECCGFGGMYSVEEPEVSTCMGHDKVLDHISTGAEYITGPDSSCLMHMQGVIDREKLPIKTIHAVEILAANL
>NZ_CP024591.1|WP_099777256.1|216518_217886_+|lactate-utilization-protein
MSTKHSEAAARFLENKAGAKWHDETLWMVRHKRDIQRDTVPEWEDLRQLVHDIKRYNVTHLDELLLRFEENARRNGVIVHWAKDAKEHNEILYGILRDHGVKKFVKSKSMLTEECHLNEYLIEKGINVIETDLGERILQLMEEPPSHIVMPAIHIKREAVSDLFHDKLGTEKGNYDPTYLTRAARKSLREDFISADAAMTGGNFAVASTGEVVVCTNEGNADMGMACQKLNICSFGLEKLVPDLDAVGVFTRLLARSGTGQPSTTYTAHYRKPHEGGELHYIIVDNGRTDIIENEEHVKTLNCIRCGACMNTCPVYRRSGGYSYTYFIPGPIGINLGMLKDPRRYSDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDLDHLGRASQEKKLMSAGMKYLMDSPWRFNTALKMAPMANSLPRFLLYNGLNAWGKGRELPRFASTSFNNWWKKNIKK
>NZ_CP024591.1|WP_004584295.1|217891_218476_+|hypothetical-protein
MDSRQIILDRIKQHTKQREPKPEMNFTPITYPDKVARFIEISRAVGGDAIELQPGQDINEVIRAAYPDAKRIGSALPYIHIATYKPDEVENPGDMNGTDLAVIEGEIGVCENGCVWVDQTIQKRAMFFISEYLVIVLDKTKLVHNMHEAYKRVAEIDSQSPYSCFISGPSKTADIEQSLVIGAHGARGAIVILK
>NZ_CP024591.1|WP_004584294.1|218586_219060_-|PaaI-family-thioesterase
MDKKSFQEYYATGFSHCYGCGTSNEHGLHVKSYWAEEHPDETVAYFRPDSHHTGGFPGFVYGGLIAAILDCHGNGTAAAAGYRFQSRPMDSEPNLRYVTANLNLNYRRPTPMGVDLELRAHIKEVTDRKVLMELSLIAEGQVTVEGSMLSVLLPEKK
>NZ_CP024591.1|WP_099777257.1|219394_221413_-|OmpA-family-protein
MYSGHHKIHYPFLILLVCLAFAACKSVKLKDAEKAHDRQEYTKAADMYNTLYRRTRRKQVEMKAYTAFRSGENYRAAGRQAKALRGYLNARRYGYPDSVVLLRLAQTYQQGGNYKEAEVLFRGYLEAYPKSYFAAIGLEGCLFARQQKEYPTRYRIRRAAEWNSARGDFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDSVSGGINTPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIMRDSLRMAAHPSMSASGDYLYFVSNIGGSYGGKDIYRVKVSDRSYGSPENLGPDINTPGDEMFPFIDGDSTLFFASDGHAGLGGLDIFKATLDSTGRWHVVNMGQPVNSSADDFGLAVEPKGKNKEEALPDNGVKGVFCSNRGDARGWPHLFHFELPAIYTEIQGYVMDREENPIAGATVRIVGERGPVGQGFVTTRDDGSYKMSVQGDTRYVMLAGASGYLNQYVELKTDTAKQSETYYVDFFLASREKAEGLQNIFYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADRKGPDAYNLGLSDRRAKSVVDYLTSRGIAADRLTWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEEQQSVCDQLNRRTEFRVIEEELR
>NZ_CP024591.1|WP_099777258.1|221434_222028_-|radical-SAM-protein
MLVNEIFHSLQGEGANTGRAAVFVRLAGCNLACPYCDTDFAQGKKMSLEEIARSIEHYPTRFLIWTGGEPTLQLTEEAMAYFHRLGYYQAIETNGTRPVPKGIDYISCSPKPEAIGKLKENFPDGVGEFRFPLGSDTPLPPPIDELPTAQHYLVSPIFAGDDAMEPDPSAITRCVEFVKAFPAWRLSIQMHKLIHIP
>NZ_CP024591.1|WP_005873459.1|222047_222467_-|6-carboxytetrahydropterin-synthase
MITAERYHDISMGHRVVGHDHKCRHLHGHNYRIHFICSAPALDSIGRVVDFGVIKELLCQWLEDHWDHKMMLWEQDPLLPALRATVPDDLVAVPFNPTAENMAVYLTEVVGPMQLAGTGVTLIGCRVDETRKCSASYTL

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Crispr_ID: NZ_CP024591_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_2

1479961-1480662

TypeIII

Consensus_repeat	Method
ATGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	PILER-CR
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CRT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	PILER-CR

9 spacers

cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

The CRISPR arrays of NZ_CP024591_2

>merge|NZ_CP024591|2|1479961-1480662|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGCAATTTACAGATGTTGCTATGTGGATGAGGCTTAAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGGGAAAGGAAGGAGTTCTCAGAAAAAAAGAAAGAATGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGACATAGAGGGTATAAATATAATATCTGAGTTTATCGTCCTGAAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGGATGACCCTAACAGCAGCGCTTGATGAAAAGAACAGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTGTTAGAACGCAAGGTTTGGACAGAACAGGTTATTGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTGCAGGAGACGAGTATGAAAAGAATGATGAATTGTTGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTGATTGTATTGTAGCATATAAAGTTTATATGCATTTGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTTTAAAGGATTTGATGCGTCAAAATCTTGGTCTTATGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGCTAGTTAGAGCTCAATTGAAGAGTTCTGAAGATTTCGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>NZ_CP024591|2|2|1479961-1480142|PILER-CR
TGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGC	AATTTACAGATGTTGCTATGTGGATGAGGCTTA
AGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGG	GAAAGGAAGGAGTTCTCAGAAAAAAAGAAAGAA
TGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGACATAGAGGGTATAAATATAATATCTGAGTTTATCGTCCTGAAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGGATGACCCTAACAGCAGCGCTTGATGAAAAGAACAGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGTTAGAACGCAAGGTTTGGACAGAACAGGTTATTGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGCAGGAGACGAGTATGAAAAGAATGATGAATTGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGATTGTATTGTAGCATATAAAGTTTATATGCATTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TTTAAAGGATTTGATGCGTCAAAATCTTGGTCTTAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CTAGTTAGAGCTCAATTGAAGAGTTCTGAAGATTTC


>NZ_CP024591|2|2|1479962-1480662|CRISPRCasFinder
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CAATTTACAGATGTTGCTATGTGGATGAGGCTTAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	GGAAAGGAAGGAGTTCTCAGAAAAAAAGAAAGAAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	ACATAGAGGGTATAAATATAATATCTGAGTTTATCGTCCTGAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	GATGACCCTAACAGCAGCGCTTGATGAAAAGAACAGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGTTAGAACGCAAGGTTTGGACAGAACAGGTTATTGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGCAGGAGACGAGTATGAAAAGAATGATGAATTGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGATTGTATTGTAGCATATAAAGTTTATATGCATTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TTTAAAGGATTTGATGCGTCAAAATCTTGGTCTTAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CTAGTTAGAGCTCAATTGAAGAGTTCTGAAGATTTC
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>NZ_CP024591|2|2|1479962-1480662|CRT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CAATTTACAGATGTTGCTATGTGGATGAGGCTTAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	GGAAAGGAAGGAGTTCTCAGAAAAAAAGAAAGAAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	ACATAGAGGGTATAAATATAATATCTGAGTTTATCGTCCTGAA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	GATGACCCTAACAGCAGCGCTTGATGAAAAGAACAGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGTTAGAACGCAAGGTTTGGACAGAACAGGTTATTGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGCAGGAGACGAGTATGAAAAGAATGATGAATTGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGATTGTATTGTAGCATATAAAGTTTATATGCATTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TTTAAAGGATTTGATGCGTCAAAATCTTGGTCTTAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CTAGTTAGAGCTCAATTGAAGAGTTCTGAAGATTTC
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

>NZ_CP024591|2|3|1480260-1480662|PILER-CR
	AATTTACAGATGTTGCTATGTGGATGAGGCTTA
AGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGG	GAAAGGAAGGAGTTCTCAGAAAAAAAGAAAGAA
TGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGACATAGAGGGTATAAATATAATATCTGAGTTTATCGTCCTGAAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGGATGACCCTAACAGCAGCGCTTGATGAAAAGAACAGAGTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGTTAGAACGCAAGGTTTGGACAGAACAGGTTATTGA
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGCAGGAGACGAGTATGAAAAGAATGATGAATTGTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TGATTGTATTGTAGCATATAAAGTTTATATGCATTT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	TTTAAAGGATTTGATGCGTCAAAATCTTGGTCTTAT
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	CTAGTTAGAGCTCAATTGAAGAGTTCTGAAGATTTC
GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_077070659.1\|1485756_1486458_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|187813
NZ_CP024591.1\|WP_077492688.1\|1490772_1491024_-\|hypothetical-protein	cmr1gr7	mkCas0102_cmr1gr7_CAS-III-B	unknown
NZ_CP024591.1\|WP_005874415.1\|1469014_1469692_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP024591.1\|WP_012458659.1\|1475215_1475851_-\|DUF4294-domain-containing-protein	unknown	unknown	gnl\|CDD\|379485
NZ_CP024591.1\|WP_130267025.1\|1476048_1476195_+\|DUF1661-domain-containing-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777704.1\|1481371_1484467_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NZ_CP024591.1\|WP_099777700.1\|1472212_1474726_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NZ_CP024591.1\|WP_099777295.1\|1477587_1478673_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_004583676.1\|1470706_1472179_+\|NADPH-dependent-glutamate-synthase	unknown	unknown	gnl\|CDD\|237200
NZ_CP024591.1\|WP_099777709.1\|1489317_1490766_-\|hypothetical-protein	cmr1gr7	mkCas0086_cmr1gr7_CAS-III-B	unknown
NZ_CP024591.1\|WP_021662404.1\|1469892_1470684_+\|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	unknown	unknown	gnl\|CDD\|235747
NZ_CP024591.1\|WP_099777705.1\|1484528_1485323_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP024591.1\|WP_099777708.1\|1487723_1489325_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cls000742_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP024591.1\|WP_004583674.1\|1474752_1475148_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176856
NZ_CP024591.1\|WP_099777707.1\|1486471_1487722_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09656_cmr3gr5_CAS-III-B	gnl\|CDD\|273855
NZ_CP024591.1\|WP_099777703.1\|1479456_1479624_-\|DUF1661-domain-containing-protein	unknown	unknown	gnl\|CDD\|285160
NZ_CP024591.1\|WP_099777702.1\|1478636_1479392_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_099777706.1\|1485319_1485760_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	mkCas0098_cmr5gr11_CAS-III-B	unknown
NZ_CP024591.1\|WP_099777710.1\|1491025_1492609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_005874926.1\|1481061_1481352_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_077070659.1\|1485756_1486458_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|187813	cd09682, Cmr4_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	2.88398e-85
NZ_CP024591.1\|WP_005874415.1\|1469014_1469692_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	1.06065e-138
NZ_CP024591.1\|WP_012458659.1\|1475215_1475851_-\|DUF4294-domain-containing-protein	gnl\|CDD\|379485	pfam14127, DUF4294, Domain of unknown function (DUF4294). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 192 and 226 amino acids in length.	1.08192e-71
NZ_CP024591.1\|WP_099777704.1\|1481371_1484467_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.90351e-68
NZ_CP024591.1\|WP_099777700.1\|1472212_1474726_+\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	1.78665e-137
NZ_CP024591.1\|WP_099777295.1\|1477587_1478673_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.45453e-23
NZ_CP024591.1\|WP_004583676.1\|1470706_1472179_+\|NADPH-dependent-glutamate-synthase	gnl\|CDD\|237200	PRK12778, PRK12778, bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase.	0
NZ_CP024591.1\|WP_021662404.1\|1469892_1470684_+\|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	gnl\|CDD\|235747	PRK06222, PRK06222, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein.	2.55582e-165
NZ_CP024591.1\|WP_099777705.1\|1484528_1485323_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	6.2442e-61
NZ_CP024591.1\|WP_099777708.1\|1487723_1489325_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	4.582e-80
NZ_CP024591.1\|WP_004583674.1\|1474752_1475148_-\|hypothetical-protein	gnl\|CDD\|176856	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Micromonospora echinospora CalC, human Aha1, and related proteins. Proteins in this group belong to the SRPBCC domain superfamily of proteins, which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM), by a self sacrificing mechanism which results in inactivation of both CalC and the highly reactive diradical enediyne species. MeCalC can also inactivate two other enediynes, shishijimicin and namenamicin. A crucial Gly of the MeCalC CLM resistance mechanism is not conserved in this subgroup. This family also includes the C-terminal, Bet v1-like domain of Aha1, one of several co-chaperones, which regulate the dimeric chaperone Hsp90. Aha1 promotes dimerization of the N-terminal domains of Hsp90, and stimulates its low intrinsic ATPase activity, and may regulate the dwell time of Hsp90 with client proteins. Aha1 can act as either a positive or negative regulator of chaperone-dependent activation, depending on the client protein, but the mechanisms by which these opposing functions are achieved are unclear. Aha1 is upregulated in a number of tumor lines co-incident with the activation of several signaling kinases.	6.69829e-07
NZ_CP024591.1\|WP_099777707.1\|1486471_1487722_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|273855	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family is found in at least ten different archaeal and bacterial species as part of the CRISPR RAMP modulue but is not a member of the RAMP superfamily itself. A typical example is TM1793 from Thermotoga maritima.	1.24757e-74
NZ_CP024591.1\|WP_099777703.1\|1479456_1479624_-\|DUF1661-domain-containing-protein	gnl\|CDD\|285160	pfam07877, DUF1661, Protein of unknown function (DUF1661). This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.	4.29793e-08
NZ_CP024591.1\|WP_099777702.1\|1478636_1479392_-\|hypothetical-protein	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	3.78137e-23
NZ_CP024591.1\|WP_005874926.1\|1481061_1481352_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.2336e-16

>NZ_CP024591.1|WP_099777703.1|1479456_1479624_-|DUF1661-domain-containing-protein
MVREVKNYRATAKKFSRRFSRKHAPQSEHFRSVNFGEADLSARDLYTAISVYFVC
>NZ_CP024591.1|WP_099777702.1|1478636_1479392_-|hypothetical-protein
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVERLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGSITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWRPLHGDWRIFCLLIHCIIGSYFVYLSIKNSIIFLPWHTNPRIPMSM
>NZ_CP024591.1|WP_099777295.1|1477587_1478673_-|IS5-family-transposase
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVDTLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEAEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIALLQGANIPQGTVVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAISPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSLG
>NZ_CP024591.1|WP_130267025.1|1476048_1476195_+|DUF1661-domain-containing-protein
MGPKFSCYAFLKTWLEKIFVLVREEKNSRATAKKKSRVFSGKRDPEFR
>NZ_CP024591.1|WP_012458659.1|1475215_1475851_-|DUF4294-domain-containing-protein
MYKRALFLLFLSGVQLLILGQLYAQEPRLGIPDSMLRHGTVVTMEQGDTVYDIALPQVWVKHKKYKSRQLTPQERQELWRLIRDVKRTLPYAKMIAATLIETYEYMETMPDEKSRQKHLKRMEKEMKQQYMPEMKRLTLRQGKLLIKLIDRQCAQSSYQLLKAFLGGWKAGWWNLFARFYGASLKTRYEPDKNPEDALTERIVLLVEEKRI
>NZ_CP024591.1|WP_004583674.1|1474752_1475148_-|hypothetical-protein
MEKNKLQLEYVFDRVSTRSLWRYLSTPDGLSEWFAYDVRLEDNGDFYFQWDKNSGEKASVLEQREGERIRFQWHREQDQNACFEFVIHHSELTGGKSLEVIDYIAPEEVADMEHFWNNLISRLRLSLGAPE
>NZ_CP024591.1|WP_099777700.1|1472212_1474726_+|primosomal-protein-N'
MRYAEVLIPLALEGSFHYRLAEGLAEKAIVGMRCVVPFGAKRYYTGIIIGLSDKRPNLQISFKEVLFLPDDKPSVTASQLSLWQWLSAYYICTQGEVLRAALPAALLPESHTVIYYNTDFEADSRLSRDEEELLDILESAKGRTYTLDTLQKAVGKRAIRAFTSLVERGAIRLEEEVKSRYKPKSEVFVCLAEPFRTEKTFASLLDSLHRAPKQSALLLHWAELITEHSLPYSSPIPQRLLAESDPHATVTLSALKKKGIFLSESVTHSVMYSAGGGEYRLWKQPQEEEKAIQSEESSTDSAVSASLPQKPLSLLYTHDFRRKEKQLLEWTEEVVRSGGQVLYLSPEANKRGGSDTLSTRLAERLGSCLLSYHAFESDAKRVEVWNRLAATEYPCVVLGVRSALFLPFRRLRLIIVDEEQEYLYKQQDPAPRFHTRQVAARLGRIHDCPVVLASATPSAEVLHQVRHKACELITWPDDRVRPRFDLEVIDMGKMRRQRQVGAGELLSFPLVSAIEETIRQKKMAVVLQNRRGFAPYIICSSCGEKLRCIHCDVSLTYHKHSGMLVCHYCGYSRPLPRICPSCKRASGVGEPSSLQPVGYGAERIEEELKRRFPTVSILRMDSDMAMSRTKMDEALARLEAKEVDILVGTQLIKGQVYNEHVGLVAVTQLDSILGFPDFRAYERAYQLLYQLMLRSGASRLYVQTNNPANSFSDLLREGDYKAFIGKQLEERQMLFFPPFSRLIRIEFRAGEESLVEQIASDYAASLAAHLPEQSLSPVLVPPISRLRNAFIRELLLRLPLSSSVSATRNILDTIRTTLQTRTQEYKRVRILFDVDPL
>NZ_CP024591.1|WP_004583676.1|1470706_1472179_+|NADPH-dependent-glutamate-synthase
MTTEELIRLRRSEPWREELRNALKNKERMSRPRAEMPELDPLYRSSKINEEVNRGLSREAAMAEASRCLDCPQPSCMEGCPVSINIPTFIKQIEVGDILAAASTLRETSSLPAVCGRVCPQEKQCESRCIYTKMNKPAVAIGFLERFAADYEREQGALKVPEMAPRNGIKVAVIGSGPAGLSFSGDMAKLGYDVTVFEALHEIGGVLKYGIPEFRLPNSIVDSEINLLEEMGVRFETNTIVGRTIAYDDLHEAGFRGVFVGSGAGLPNFMNIPGENLVGVMSSNEYLTRVNLMHASQADSDTPVFKGKNVAVIGGGNTAMDSVRTAKRLGAERAMIVYRRSEEEMPARLEEVKHAKEEGIEFLTLHNPIEYIGNERGRVTAMRLQKMELGEPDAGGRRRPVAITGAIEEIPVDEVIVSIGVSPNPLVPRTISGLEVTSKGTIVVNESNQTALPDVFAGGDIVRGGATVILAMGDGRKAAAAMHEYLKAES
>NZ_CP024591.1|WP_021662404.1|1469892_1470684_+|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein
MNKIVSKEYFSANVIKLEVEAPRIAKSRRAGHFVIIRVGEKGERIPLTIAQADIKRGTITLVVQAVGKSSKKLAELEVGDYITDVVGPLGQSTHIEKVGTVVCAGGGVGVAPLLPIVEAFHKAGNRVIVVLAARTKDLVILEEQMRANSDEVIIMTDDGSYGTKGLVTDGVESIIKRETVDLCVTIGPAVMMKFVSLLTKRYEIPTIASLNTIMVDGTGMCGACRISVGGQTKFVCVDGPEFDAHQVDFDEMIMRLGAYREME
>NZ_CP024591.1|WP_005874415.1|1469014_1469692_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRIDIITVLPEMIENTLNCSIIGRAQERGLLELKLHQLRDYSTDKWKRVDDYPFGGEPGMVMQIEPIDRIITELKTQREYDEVIFTSPDGERFDQPMANELSLLSNLIVLCGHYKGIDYRIREHLITREISIGDYVLTGGELAAAVMTDAIARLIPGVLNDAGSALSDTFQDNLLAPPVYTRPAEYKGWRVPDILLSGHEANIAKWRLEQAVERTKRLRPDLIKD
>NZ_CP024591.1|WP_005874926.1|1481061_1481352_-|CRISPR-associated-endonuclease-Cas2
MNDKKLLVAYDISSNRRRRKVARILEQCGIRINKSVFICSLRELTMDKLVEAVTSQTAKRDKVFFLPLCQHCYTAAWMSGHPTLPKSRRKRKSIVV
>NZ_CP024591.1|WP_099777704.1|1481371_1484467_-|CRISPR-associated-endonuclease-Cas1
MPLSTDSLPIFLSDFTAYHFSVRFRAERAIAFERKWYFMPRFALGNALKNSKRNAYLYGQIFKPQEEDADESKGSGNTSRLIIRADKPSRKSLEAGEAMDLYITVVTRDPLLVRDFLSFLPEWQAYNFFRENDLTYDSYRLYNPTTEKYESGLRVEDAALTVDFFSRQAIRWGEILSVRFLSPASIKVDQILSAEIPYSRLMNRLSRRLYELYTQYLSGGETSVERYIFPDHDGLIYSQISMPRKATIKENRQYDMSGILGQLFYRVPYDPVAALMLSMAHWVHIGNHTIVGNGQIESTPGNDTLYRKWLSSLAADRDLPMAETERQDLLEALRICSYIPQPYHSVNIPKGDGSYRQLHIPSAVDLHLQRSLAGILYPITESLSIAQSYAYRKGKGAVAAVRRVQHLLDSLDENHTVVRCDIDNFFDSIPVPSLLQKVQRTTEDPLLTRMLSLWMKSGVVDRKQQYARASSGIPQGSPLAPLLSNLYLEDTDRYIAGHITTEFIRYADDLLLFLPEKVDPLNALQDLSEHLKYRKGLKLNRDFVVSSIKSSFSFLGITFCADGSRSMSRDKKEGLKRKITLALHRDTENFSALSETIHGMEQYYRKLLEKVDIEAIDEVAATVYATYIASLPTSEARKSAKDNLLRLGFLSSETAKQTLREAMRQTEVSSADNFPIKKESEILREQQKRQLQERGEIFDLVVTEPGAFIGISRNHVLVRKYGKTICKQPAAQIEQISIISDGVSLSSNVTKYCRKKNIRVIFYNATGQAYASLNGMNTILPSVMEAQMRLSEEKKREFILTLIKNKVRNQGKLLRYYHKYYRHDKELKEPLSNAIAELKQLEGIPIAEGSSLADFRQHAMLHEARCAQVYWRAFALLVHRSGHEFEGREHKGAEGLVNQMLNYGYAILRSYVMKTIDLWQLNPNIGILHSTQDNKPALCFDLMEQYRAFVVDRSILALLAKGEDVGQNNKGLLDMPTRSRIISKINERWFATEYYRSGEKLFSDIMKLQTKDVRAFCCGKVKRIKFYTPKW
>NZ_CP024591.1|WP_099777705.1|1484528_1485323_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MNFGYWYYREYFDTINLDSKDIVTNFSTFNKGKNDKLIKGATLPPCDKENDIKDVTGFELKTCYPGLLCGVGYHHEINKPADEKGKKVEGDKEDDAPEVYNLGMYFDYTSGLPVIPGSSIKGMLRSAIEEWDFLADYKPQEKNTPPASLSDKKVLHEEIIKTVFEGKGLSIYDRDIFLDAIPIKADNKLFGEDYITHHPTPLQNPNPVRFLRVNPGVTYQFRFILRNNDNGLKADFKEDLFKAIICTFGLGAKTNVGYGQFVEH
>NZ_CP024591.1|WP_099777706.1|1485319_1485760_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MNKKTIQDLIPKAMQAIEGVGIVGKDKKFKKVHEGYINALGPNIVQSGLLPTLIFYNKDERALWLRALYYMAVDGEEKMTDESSTAIIRLIIGKEGGRIENLKPKAKEWERKILEYAVALKLALRTFVAEEPETSNTEQQQEGGAQ
>NZ_CP024591.1|WP_077070659.1|1485756_1486458_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MKTAAYMIHCLTNMHVGKGDATYEVVDKCVQRDVTTGMPCIYSSSLKGALRQFFSKQGFAELNYVFGKDQSRDKKNNGNEKNEEEHSVGNFTFFQANLLAYPVQTTQEGATYILKTNKTLQDPIKELAKLLSAPSNIEDLLPEGIEKDLSNEALEQLPVIARNQLDNGESKNLWYEEVVPAESRFVFFVSYDDEEIFAKFDKIIQEGVIQIGANGSIGYGFCKIANVTNPFKK
>NZ_CP024591.1|WP_099777707.1|1486471_1487722_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MSTYLIKLTPLDKFFFGQKKTFGDDNANYFVYSSHFPQQTTLLGLLRYQLLQIAGEEVFKDNKIQDEHKAGELIGKQSFSPFVKDKLQFGIIQSLSPVFIIDKKKDEGKEEYFLPVGKRFQKEEEDLYELLHLSCKEGCPPIFDEYKPKKGLASCWLSSNGTTLLNEEDFFTKDERIGIRKDYEGATNDDAFFCQRYYRFNNFKKVVEDEEAKVCKQPPVREHDFCFATVLETEGEIEHKKLNEKIVYLGGERQPFLMEISEEKKASDLTIESSTFTAETYYKSLFKTFKLNIESSTLTSDEKHYTVVLLSDAMIEPEHLEGVKFASTEVKDFACLLTHVGTRKFYNKKKKREEQNLEKDETVLSHQHELYARGSVFYFDTEEQANQFCEDLEKVPNFHTIGYNHAIIIEPTKTKK
>NZ_CP024591.1|WP_099777708.1|1487723_1489325_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MSNEIYTAITIGPIGKTLAKARSVKSFWTASYLFSWIMRKLLEKLPKENFEILSPYRAGKDVLGEISKKVGLFPDRLFAKGELEEKEFKRIKREIFGELAEKFKNAFQDEKDDIARKIDTESDQKRKRELEEIKSRYSNAASKGEDIRKYLENYLSISSITVELSSDCSILEQLNKYLDTQEVFNKASTQTEEDYMEMFIEAPNNPFLKAYSQDRAFPSTSEIAVSGWEQNPPKDANGEVDYSKLTSKTGFRNCYKYLAVIRADGDGFGTYIKNLNVNKENELTRFTKSFFEFSVEVANELIQKTKAIPVYIGGDDLFLFAPVLEGNVEKDVFNLIKEIDDLFIQKEIGEGLSMSYGVSIFYYKSPMSEAIDIADSMLRKAKEEKEEKEKKKDTVAISIQKHSGQKIEFLLPCKHSTDKCKQETGLYKKATELIRAFKEDDSMLNSLIYWIEDMYETIFTDEVTLYQERINAVFDNFFDEEIHKENEVFFDLLKKFIHSMHHSEDTPRKLKDKKKLLHGILRYCQFVTAKKEK
>NZ_CP024591.1|WP_099777709.1|1489317_1490766_-|hypothetical-protein
MYKLEFELEQHTPIIHFQARDAGATLRASEVKPKLDKFVLTQIGKGFVNDPKANEEEYYKEGKKHLQNKDAEARRVYEEEKKKGNKGAKLELCLIPGQEGALNYKLSFKLSPDAKVQYFLPMSSNPKEIDKLKSLAQEKLGVQEVEMLPLTSYFANEDKAKSEPNIKHGDTPDQIKNKKRIFEENWQKVQLATFVNTPVEGVIRFQNAGLREEVNNLITNFFMLHNFGARQSKGFGSFIISLRDGKEEEDYFDTGCACYGYSFYIPAKTLEEALRKINYFYRSLRSGFNEYRGKNEIFYAKSGMHFYATKHNFEWDKKSIKGMLFDRDKDLEGKMKKEELFAFRDLLGLSSNERWQSYKTTITKECRNKKGEKFDRIKSPIQFKPICYSKYDYIVFFDLFPEKSGIPQLKGGKVVVKSSRHKGAVLELKIQEDIDLYNVFNEIFSELNFESQVGEYDSLTDAKEIFETMKDIYEQLNKNCHE
>NZ_CP024591.1|WP_077492688.1|1490772_1491024_-|hypothetical-protein
MEIETLILLCFVVVATATIIVVAIIWSYKLKIKKEELRDKTLVELERERTKDLNKWQSFSESLLETNKGLMEVYCKDNTKQKA
>NZ_CP024591.1|WP_099777710.1|1491025_1492609_-|hypothetical-protein
MEAETYSRHIFIFPFQWDYIEKRGYASYNERTDIKKFDKLFSAVSPLKRQYFEIGASEERYNEYTYFHPFARRALFGTKENPSVYYYELSDTQGTYNISVKIDGVSTTYSLQLEKIAVSVFDTGVGTVAYFLRNDKHTSFEDILRINDSGRRIYPQYMAKGNRLKAKDSFLADRIYGSLGVLDFDDDFRQFEEDISHTNIFLPPDHIRQVFGYNKMDRTEDDGCQKFVFHQESERKDIIRISPVMDDRMFFITYYHSPYYAKKLRSKPKNFRRKREYNIYEEGRFGDLWFRYIFGDGGDKTVANTSVQREDVRRTTYARWSGSGTLFGLTKDSLVGISDWYLIGDHITTMYYQMATLSLVQRSTILRFSNEIASITQLILDEKTKRKTEKQVKELYGNYIRFLNETYFREVTPQIQGIEMYDMLQSNMNIEKDAKALDEEMGELFNYTTLEEQGVLNKTANLYLPITLLVGFLGINTFVEKGCITRFFNIGDPCPSTWGLLGGDIITLIVFVICLYFPIRHYFKYRK

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Crispr_ID: NZ_CP024591_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_3

1584254-1584945

Unclear

Consensus_repeat	Method
ATTTCAATTGCACCATACAGGAATTAAAAC	PILER-CR
ATTTCAATTGCACCATACAGGAATTAAAAC	CRISPRCasFinder
ATTTCAATTGCACCATACAGGAATTAAAAC	CRT

10 spacers

cas2,cas1,cas4,cas3,cas7b,cas8b4,cas5,cas6

The CRISPR arrays of NZ_CP024591_3

>merge|NZ_CP024591|3|1584254-1584945|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATTGCACCATACAGGAATTAAAACCACTGAATAGAATCCCCGCCCGCTCTTTGTGCATGTATTTCAATTGCACCATACAGGAATTAAAACCAAGAAACACCCTGACGTGGAGATAGTAGGGCATAAATTTCAATTGCACCATACAGGAATTAAAACCTGTAAACGCCCTGTTGGACGTCACGGCGGAGAAGCATTTCAATTGCACCATACAGGAATTAAAACCCCCTTCCTTAAAGTATTCTCCTCGATTTCGTTGTAGATTTCAATTGCACCATACAGGAATTAAAACGAGGCCGTTTGTTTCAGCATCGAGGGTTAATATTACAATTTCAATTGCACCATACAGGAATTAAAACTTATAACGCTCAAAAGGTTTAGATGGGTTTATTCCAAATTTCAATTGCACCATACAGGAATTAAAACTTTCTCCAAGAAACCCTTATATGAGTCGGTCACATCTATTTCAATTGCACCATACAGGAATTAAAACGCCTTAATCATAACTCCTACAATTGATTTCTTCATATTTCAATTGCACCATACAGGAATTAAAACTAAATGACCGAAAATGAGGAATTTTCTTCTCCTCAATTTCAATTGCACCATACAGGAATTAAAACTCAAGGAGTAAAACTGATAATTTTCTGGGAGCTTGAATTTCAATTGCACCATACAGGAATTAAAAC

>NZ_CP024591|3|4|1584254-1584945|PILER-CR
ATTTCAATTGCACCATACAGGAATTAAAAC	CACTGAATAGAATCCCCGCCCGCTCTTTGTGCATGT
ATTTCAATTGCACCATACAGGAATTAAAAC	CAAGAAACACCCTGACGTGGAGATAGTAGGGCATAA
ATTTCAATTGCACCATACAGGAATTAAAAC	CTGTAAACGCCCTGTTGGACGTCACGGCGGAGAAGC
ATTTCAATTGCACCATACAGGAATTAAAAC	CCCCTTCCTTAAAGTATTCTCCTCGATTTCGTTGTAG
ATTTCAATTGCACCATACAGGAATTAAAAC	GAGGCCGTTTGTTTCAGCATCGAGGGTTAATATTACA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTATAACGCTCAAAAGGTTTAGATGGGTTTATTCCAA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTTCTCCAAGAAACCCTTATATGAGTCGGTCACATCT
ATTTCAATTGCACCATACAGGAATTAAAAC	GCCTTAATCATAACTCCTACAATTGATTTCTTCAT
ATTTCAATTGCACCATACAGGAATTAAAAC	TAAATGACCGAAAATGAGGAATTTTCTTCTCCTCA
ATTTCAATTGCACCATACAGGAATTAAAAC	TCAAGGAGTAAAACTGATAATTTTCTGGGAGCTTGA
ATTTCAATTGCACCATACAGGAATTAAAAC

>NZ_CP024591|3|3|1584254-1584945|CRISPRCasFinder
ATTTCAATTGCACCATACAGGAATTAAAAC	CACTGAATAGAATCCCCGCCCGCTCTTTGTGCATGT
ATTTCAATTGCACCATACAGGAATTAAAAC	CAAGAAACACCCTGACGTGGAGATAGTAGGGCATAA
ATTTCAATTGCACCATACAGGAATTAAAAC	CTGTAAACGCCCTGTTGGACGTCACGGCGGAGAAGC
ATTTCAATTGCACCATACAGGAATTAAAAC	CCCCTTCCTTAAAGTATTCTCCTCGATTTCGTTGTAG
ATTTCAATTGCACCATACAGGAATTAAAAC	GAGGCCGTTTGTTTCAGCATCGAGGGTTAATATTACA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTATAACGCTCAAAAGGTTTAGATGGGTTTATTCCAA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTTCTCCAAGAAACCCTTATATGAGTCGGTCACATCT
ATTTCAATTGCACCATACAGGAATTAAAAC	GCCTTAATCATAACTCCTACAATTGATTTCTTCAT
ATTTCAATTGCACCATACAGGAATTAAAAC	TAAATGACCGAAAATGAGGAATTTTCTTCTCCTCA
ATTTCAATTGCACCATACAGGAATTAAAAC	TCAAGGAGTAAAACTGATAATTTTCTGGGAGCTTGA
ATTTCAATTGCACCATACAGGAATTAAAAC

>NZ_CP024591|3|3|1584254-1584945|CRT
ATTTCAATTGCACCATACAGGAATTAAAAC	CACTGAATAGAATCCCCGCCCGCTCTTTGTGCATGT
ATTTCAATTGCACCATACAGGAATTAAAAC	CAAGAAACACCCTGACGTGGAGATAGTAGGGCATAA
ATTTCAATTGCACCATACAGGAATTAAAAC	CTGTAAACGCCCTGTTGGACGTCACGGCGGAGAAGC
ATTTCAATTGCACCATACAGGAATTAAAAC	CCCCTTCCTTAAAGTATTCTCCTCGATTTCGTTGTAG
ATTTCAATTGCACCATACAGGAATTAAAAC	GAGGCCGTTTGTTTCAGCATCGAGGGTTAATATTACA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTATAACGCTCAAAAGGTTTAGATGGGTTTATTCCAA
ATTTCAATTGCACCATACAGGAATTAAAAC	TTTCTCCAAGAAACCCTTATATGAGTCGGTCACATCT
ATTTCAATTGCACCATACAGGAATTAAAAC	GCCTTAATCATAACTCCTACAATTGATTTCTTCAT
ATTTCAATTGCACCATACAGGAATTAAAAC	TAAATGACCGAAAATGAGGAATTTTCTTCTCCTCA
ATTTCAATTGCACCATACAGGAATTAAAAC	TCAAGGAGTAAAACTGATAATTTTCTGGGAGCTTGA
ATTTCAATTGCACCATACAGGAATTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_099777740.1\|1582727_1583744_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP024591.1\|WP_077070312.1\|1596005_1599488_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|369506
NZ_CP024591.1\|WP_099777750.1\|1595206_1596013_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|334323
NZ_CP024591.1\|WP_099777747.1\|1591800_1592886_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_099777745.1\|1588183_1590187_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965
NZ_CP024591.1\|WP_005874865.1\|1579877_1582199_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP024591.1\|WP_099777746.1\|1590552_1591605_-\|hemagglutinin	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777748.1\|1593483_1594743_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NZ_CP024591.1\|WP_099777738.1\|1574541_1575627_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_005874855.1\|1577361_1578861_+\|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2	cas8b4	cd09715_cas8b4_CAS-I-B	gnl\|CDD\|132526
NZ_CP024591.1\|WP_077083262.1\|1599512_1600934_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP024591.1\|WP_099777739.1\|1575959_1576625_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP024591.1\|WP_143733962.1\|1586872_1586980_-\|DUF1661-domain-containing-protein	unknown	unknown	gnl\|CDD\|285160
NZ_CP024591.1\|WP_005874854.1\|1578871_1579888_+\|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1	cas7b	cd09717_cas7b_CAS-I-B	gnl\|CDD\|132528
NZ_CP024591.1\|WP_099777741.1\|1583743_1584007_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP024591.1\|WP_099777744.1\|1587563_1588154_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_157766540.1\|1574301_1574517_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_088442945.1\|1582218_1582731_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP024591.1\|WP_013815299.1\|1576621_1577365_+\|type-I-PGING-CRISPR-associated-protein-Cas5p	cas5	cd09716_cas5_CAS-I-B	gnl\|CDD\|132527
NZ_CP024591.1\|WP_099777749.1\|1594764_1595214_+\|phospholipase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_099777740.1\|1582727_1583744_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.62825e-164
NZ_CP024591.1\|WP_099777750.1\|1595206_1596013_+\|metal-ABC-transporter-permease	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	1.37891e-50
NZ_CP024591.1\|WP_099777748.1\|1593483_1594743_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	1.01529e-83
NZ_CP024591.1\|WP_099777745.1\|1588183_1590187_+\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	0.00123818
NZ_CP024591.1\|WP_005874865.1\|1579877_1582199_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.86657e-160
NZ_CP024591.1\|WP_099777738.1\|1574541_1575627_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.65966e-23
NZ_CP024591.1\|WP_005874855.1\|1577361_1578861_+\|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2	gnl\|CDD\|132526	TIGR03487, cas_csp2, CRISPR-associated protein Cas8c/Csp2, subtype PGING. Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pging (Porphyromonas gingivalis) subtype.	0
NZ_CP024591.1\|WP_077083262.1\|1599512_1600934_+\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	2.87049e-12
NZ_CP024591.1\|WP_099777739.1\|1575959_1576625_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.72872e-36
NZ_CP024591.1\|WP_143733962.1\|1586872_1586980_-\|DUF1661-domain-containing-protein	gnl\|CDD\|285160	pfam07877, DUF1661, Protein of unknown function (DUF1661). This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.	0.000710542
NZ_CP024591.1\|WP_005874854.1\|1578871_1579888_+\|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1	gnl\|CDD\|132528	TIGR03489, cas_csp1, CRISPR-associated protein Cas7/Csp1, subtype PGING. Members of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.	0
NZ_CP024591.1\|WP_099777741.1\|1583743_1584007_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.07151e-31
NZ_CP024591.1\|WP_099777747.1\|1591800_1592886_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	2.00945e-23
NZ_CP024591.1\|WP_088442945.1\|1582218_1582731_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.12593e-68
NZ_CP024591.1\|WP_013815299.1\|1576621_1577365_+\|type-I-PGING-CRISPR-associated-protein-Cas5p	gnl\|CDD\|132527	TIGR03488, cas_Cas5p, CRISPR-associated protein Cas5, subtype PGING. CC Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pgingi (Porphyromonas gingivalis) subtype, but shows some sequence similarity to genes of the Cas5 type (see TIGR02593).	4.70758e-157
NZ_CP024591.1\|WP_077070312.1\|1596005_1599488_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|369506	pfam07767, Nop53, Nop53 (60S ribosomal biogenesis). This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumor suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins.	1.71181e-08

>NZ_CP024591.1|WP_099777741.1|1583743_1584007_+|CRISPR-associated-endonuclease-Cas2
MYIILVYDIGEKRVGKMLKLCRKYLNWIQNSVFEGEISEVKLLELKSRAAGIMEKEEDSLIIFSSRQERWLEKEIIGKEHSATDIFL
>NZ_CP024591.1|WP_099777740.1|1582727_1583744_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNPGELSRKDNTIRFVPIQEGENGQEQAGQARYIPIEGISDFYVFGSLRANSSLYNFLGSNDIAVHFFDYYENYTGSFMPRDFLLSGKMLLAQASAYKNKKKRLFLARKFIEGAASNMQKNLAYYNNRGKDMQPMMELIDKYSLRLEETTTIEALMGIEGNIRQAYYDAFNLIIDPFEMGVRSKQPPQNEVNALISFGNMMCYTLCLKAIHQSQLNPTISFLHTPGERRYSLCLDISEVFKPILVDRTIFKVMNKRIIQAKHFDKQLNKCILNPSGKKLFVQAFEERLSETIRHRKLNRSVSFRHLVKLECYKIAKDILGIEEYQPFKMYW
>NZ_CP024591.1|WP_088442945.1|1582218_1582731_+|CRISPR-associated-protein-Cas4
MNTISGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGIKIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVSGATGILEYPTLRKKEEVILSDVDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
>NZ_CP024591.1|WP_005874865.1|1579877_1582199_+|CRISPR-associated-helicase/endonuclease-Cas3
MINKESPILAKPSGITLDVHAENVIQEGALLLKGLGCTKEKYFQTTAKQIVQRVELACKYHDIGKRNKIWQDACKKDYKAYLIWKKIHPNKSFEDYTIECREEAGKFLRQTHVRHEFYSIKGLLNNNPPPNNNPPYWLKIAIAAHHRKLSMKHEERWLSSDEDICSVWKDIRRLSNYFFDDRNSVLSDIAIKQYEFAGPRSLLQLADHRASAKEESKCIPDPIAFSYTFPEKWEKRPVQKLVEKHWRDELLLVRAPTGAGKTDAALLWASHQIKHRKADRLIIAMPTRFTTNALALSVSSTLSSTGLYHSSAWTQNFSSKIDNGEIALEQARYYHNQARLLQTPITVCTIDHLLSSLTLCDEEHQTITFALANACLVIDEADFYDQFTQANILVLLEVLKYWKVPILLMSASLPDNIVQEYRKIGYDIKHILEDTSDIERARFSLIEKRDVSEISQMQDLLQLCLDRGSAIIFANTVDRAQAYYQWFLENGHEEEVILYHSRYTETDKIEKEAQLLLRLGRSAWDNDRANGVAILTQIGEMSVNISADIMISDLCPIDRLTQRCGRLCRFSRKIGDLYIIRPMREGNLFPAPYYQNVGPSQKLEPNDALIQTDELLEKGMYSAANLVQLLNKVYANQTVFSTEASRNADRLREMFKANWLINPIEYLDEEIGSTNFWRARNIMPRCRIYIKRPLQSFRNYSDFRRWETDVAIDIPIYVIKKAMRMSDTVCSQVKVCIGKNDYTLIVINAKCYNNVRGLFFSESVLEEPNFEFL
>NZ_CP024591.1|WP_005874854.1|1578871_1579888_+|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1
METKKIAGVLVTMVAPFENHMANGGEKLFGNASSIKRRPDGRVYVSGQMQRHVLFSAIDRLNHLDKAKGTTFVSNGDGITNLIEIDLRADLGGFMHTNKGDYSDRRIAPLSVTPATALDTSSVGRDLLVRIRFDKSSDAKNQALATREYSEQDKMNMNFFLDITSVGVSKSFVYKDGLNLGTKYFKHITDDEKKRRVKLFLEATRIMNDYANQARNAVCGEPEKVLIVFDDRLSRKACRYYTVGEKEQANIIKELDQYQVKYFVGDDASDYSVADAYRDAMNYLDKATLVDFAEGEEIMTFAEAFECKEKEPQEKKSKKGKDKATSAQNLFAEQQDDQ
>NZ_CP024591.1|WP_005874855.1|1577361_1578861_+|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2
MNTNHYYIRYGCAITLYDNHVSERERLTPKELRFSIEKAVSSFRIQAQEPFSPGSKARFSFVKRKDGNTKNGIFLSPHIVTKDMHAQKVWTKASKFLEIDYLGKDNEREGLLKKDNVSMSNIPISGEYLTFGEKDTGRGSAKISVEEQTYGLITTLTPLKPALQVGKDNFCIIPDIPLNQMVDFIALFDKMQITHLSGEAMLGNIDNKGIPHRPKIFRGNFPNSPKSDRMGAIALLGAIGEFAKHAEFSTLAQKVLDSLKGSTLYLITYGNAIPFTFHHYIIDLAKEGKLHSIVDSLFYSRLYKKEKRVYGDTDYDRFDFFTNRFLQSFNKAAFDDFFSSRVEYPNQIKILFQMFFTKMEKLKTDVIASAQILGSWLNQVAYFAAKEEADSRISPGNIFEEKAKFLVMMESSIYAAKRGDALIAQILILAGRLSKNEAPKEALLFMEKTITGEIDLSVAKNLLIAYMRIRREEKQRDLNSVKNDDAIPSDINIDDLTNT
>NZ_CP024591.1|WP_013815299.1|1576621_1577365_+|type-I-PGING-CRISPR-associated-protein-Cas5p
MKYNMKNIDLSILGKDPDLSASIKLHIEPHAPISMVSELPGSYYKALLYPDKHILCGLFENVLGWHFSRKDREIITKEIKNIRKKAKKGYIPPTIRSIFIPLLSDFFELDSVRIVSTDSPFFYNDLWKRAFRRKDAGKIHFGGTQNIDYTLVMDKFRFMCENERALETEEKTDQKEEKFLRENIDRISFFYTTPTNREYLFFEGNYECVIKMDPQLVDLLSKTLPQQNMGYLGNSEGWVTLYLEEKS
>NZ_CP024591.1|WP_099777739.1|1575959_1576625_+|CRISPR-associated-endoribonuclease-Cas6
MRIELSIKADDSLVSFSHQHLLVGTLQKWLGENDMHGKSISYSFSRLNGGKLVSELNSILFADWANMFVSAHDPELIRRMLAGIRQDPEMFKSLCVREVTVIEDPDMTDREIFFPASPILLKRWREDNGFDHIVYTDEAANALLTENLCKKLQAVGIDDPTATASFVPDQGKAKVMLIDYRGVKNKASWCPIRIIGNAETKLFAWNAGIGNSTGIGFGAIK
>NZ_CP024591.1|WP_099777738.1|1574541_1575627_-|IS5-family-transposase
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVERLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>NZ_CP024591.1|WP_157766540.1|1574301_1574517_-|hypothetical-protein
MQVAPQRGDLQLLSLLTATPFTRSFYAKNSSSLHLLILQRSHTVMLWHKERGYGEGEFPFVTASRHAEGEI
>NZ_CP024591.1|WP_143733962.1|1586872_1586980_-|DUF1661-domain-containing-protein
MAREFFTSRTKTKKFPRHVFQSVDSLLQRVRYPLL
>NZ_CP024591.1|WP_099777744.1|1587563_1588154_+|hypothetical-protein
MKRTLVFLFLTAVLALRAEAQSAPEQSETKDFIFSPQKEMVYVAIGYPAGIGLPSLDNYNVEGASASFAVGYERGVKQLAEGLLLSIYAELDWAAFRSVSDKRSLPFSDDSVQDRFRFLAGAGVHKRLNPNIELYARGAVGASFFPENNGSSSRELKGGFNVSLRVGLSCSLRDNFAVFIDTGTSDIVRGGLALMW
>NZ_CP024591.1|WP_099777745.1|1588183_1590187_+|hypothetical-protein
MKPLLTVVCAILLSLPLGGQTVVPEWDEYIAEQIESGALGEDEGAEFLERWMVQKQHPLDINTLTREDLEQFPFLNEFQIRRFLLYRRAHPEGFDSIWVLNEIAGWDRRTCLLLWPMLTVQKRSEPAVASFREILSYARHDVSVHTDAILQRQEGYRPDSRHPYRGDPWGGGLRWSYAMGNRFSLGLTASKDRGEPAFDKRRKGFDSYSAHFFMEGKGAVRAVALGDYRIGMGYGLLVNQASFMGMAYAYPRGGTTLRRAFTYAEDNFMRGAATALAQGRWALTAFYSRKGIDATVTEDGAIKAIYHTGLHRTDAEIARRNAATMTTAGTSVSYTDDRLRLTFNLLHLHWGGLRLLRAVGTQGIASLTDLERFSLVSADYSYLFGQGEAELFGEFAGAANGAVGTINGLRYTHPVGGSYMLVGRYIPADYWSYYRGAFARHSRPGNEWGVMGRAAWELPSAWTVRAFADYYGSFVPRFGRKEKTEALYWMFEGEKRLSALSWSCRIRGTGDKRYRRSLAVRLRGRYVFDERWRLMASLQWSRSNSFDGQQQVWQAPTGGKSFALRADYSGGKLLRVCSMDAVAFDTDSFADRLYEAVHNPRHHYSSAFFYGRGVRLGVFVRIAPLPHVEIESRTDHLLRRDTDTIGSAGELICGQARTHLFMTVRYR
>NZ_CP024591.1|WP_099777746.1|1590552_1591605_-|hemagglutinin
MTVENLRLQRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRIDREQLVYVPEDELPKPKKKKKPASSTGTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>NZ_CP024591.1|WP_099777747.1|1591800_1592886_-|IS5-family-transposase
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVERLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGRIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>NZ_CP024591.1|WP_099777748.1|1593483_1594743_+|3-phosphoshikimate-1-carboxyvinyltransferase
MKRLHCTFNPKSQTVDVSLRLPPSKSEWIRLLLLRAMSGEVLAPLEGDAPTDVRTVHRILTSDISDEVNVRDAGTAMRFLTAYMARFASRPVRMYGTERMCARPIRPLVEALRSLGADVIYERVEDFPPLLIRPAAMRGGTVCVDAGVSSQFVSALLLIAPTLRGGLSIKLENREVSAPYTDMTCRLLTAFGIEVERSEDSITVGERPFAAPTEWYPSADWSAAGYIYNMVAVGELSGSVSLPDLLPPEESMQADSRAAALFGRLGVVTEKTDSGITLSYSPVRCTDDFGTEDVRDCPDLVPTLAVCCLLKRVPFCLTGVGHLKLKECDRLAAICTEARKLGYVVRSDKDALLWDGERCTPEELPVIRVYDDHRMAMAFAAAAVLSKKGVMIEDAGVVGKSFPGFFSVSRLLGFDGEEI
>NZ_CP024591.1|WP_099777749.1|1594764_1595214_+|phospholipase
MSNILILIIGVLVLGLVAALTEIRHSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEFEEILSTLQEEEVPSWIRSLQMRQIQMPISIKEQALFIVSEHRIQHKHRHDD
>NZ_CP024591.1|WP_099777750.1|1595206_1596013_+|metal-ABC-transporter-permease
MIEALQYGFFRNAIAGSLLTAIVCGLLGSYVVARRMVFVSGGITHASFGGIGMGLYLGINPFLSAAVFAVLSALGVQGVTRAGLLREDSAIAAFWSLGMALGTLFIALTPGYSTGLSSFLFGNILLVSHTDLLLLALMALVMIAVFVFGYRTILYTAFDPDFASTRGIRVHLVEMLMSVAVAVGIVLSIRLVGIMLLMSLLTLPQSIMNLFTSRFSSILFGSVILAALAAFTGLWGSYSLGIPSGAFIILVLAALFLLAKTIKSFVHA
>NZ_CP024591.1|WP_077070312.1|1596005_1599488_+|tetratricopeptide-repeat-protein
MRSHRFLYLLVFYLLIPVAVVFGMLSCSTSKNTAASRFYHNFTTRYNVFYNGQNAYNDAYDRLLESHTEGYSEEIFLDPITAQSGQEKAKEGGAFDQAIVKGRKAIHLHSIRTKPERKQGWQSDPKAVAFQNKREYNRFLHNAWMLVGKSQFYNADFLQAQATFSYIARLYSNEPIIRDEARLWQVRCYSEMGWLHEGERLLERIPKDLPHVDRRGLYSLAVAERSILSGDKRAAIPYLQQAARQEKNKRQRARMYYLLGQLLQENNRPEEARKAYSKVLRASPPFALDFAARIRKMELEGERNPRTVAARLERMAKKGKYKDVLDQIFYAAGNIYMDIPDTLAAIKTYTTGIEKSTARGADFALCQIRLGDIYMQRKQYLKAQPCFSAAAGVLNRLNPDYKRVAELSSRLDELVGHAKVVHEQDSLLALAAMPEEQRLAIIDSVINAYAIAEKKRLEEEEMAKLQQSQELFNAESEGFAPSAGGKTQNPPPGMQMGGASGEFYFYNPQLIAQGKAAFERKWGKRVLEDDWRRRRKQANFDIPTDDSSTAEETDETQPGTLMTEEELQAAAADSATSNPLNREYYLAQLPMTEDAKEAAGKLIAEGLLGMGAVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRALILQYYPEDNLAKALSNPDYLKELAAMDRRQNELYGQAFDSYLKGVVGSVRKSRNECRERFPLSELAPKFDFLNALCYVLESDSKGFTSALKQLVKDYPKADVTELASSMLTELLRGRSIVQGGYTGIDWDIRWGSSDTDSISPDSLPPFVKPKSFERTRLILLAPAGTLNKNRVLFALASFNFSRYTEQTLEIVQSTVGAFDQWLMTSLPTPRMGWQYIKDAFAPNGFMSAMGESSLLFPISESNYQLLVKGKSIGQYMTFLAKEEVPETAFVLDRWQQMTGRAQAVGKEDEDIEPAGTPAPIVSDKNEAEDTARDSTSGTDRKPLVSIKPHKDSIMTATPITFDIDREQILSGAKPVAADSSAADTISDAAALPSLKQQEGKDVSVEQIQRLAKERAQNEKDEKKALEKAKREKERDRKRELKAREKEREKARRDKLKDQRLKQKEREQKLKEKERERKEKLRQRERERKARAKEREQKKKAGQNKSGGGPQ
>NZ_CP024591.1|WP_077083262.1|1599512_1600934_+|alpha/beta-hydrolase
MKHKVIIIIYVVVLLMTTMSCKSQKFAGDWSGRIPRGNGSLALVVHLKQTGNTWQGTMDSPDQQAFGIPLSSVTVVGDSLSIAVQDLLLSYKGKLKNDSIEGEFRQGRFGTMMSLYRGLDAAKPYRPQTPVPPFPYDVTDVKILHKTGGFTIAGTLTAPKDANKTKGTVILISGSGLQDRDETIFGHKPFAVLADQLTRHGYAVLRCDDRGFGESAGDASQATTDTLAGDIESELAYLRQHYPRLTDKVFLIGHSEGGIIAPMVARRVGGIAGLVLVGAPSVKGAEILLSQNAAMDEFATGQPQSQAKRAALEELIRQATAPGDSSDIRTRIESYCRSNASVLFPQAMTDEMKEQGIKLMTEQLSNPWMRHFLTYDPAPLLDVTSGEGSHPLPPTMAIYGGRDKQVLHEVNMSKMKSLLGIETGNTTNKVVYLPEVNHIMQPAEFGTPDEYAFLNRTVDTELMEIVCSFLDSL

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Crispr_ID: NZ_CP024591_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_4

1586498-1586609

Unclear

Consensus_repeat	Method
CTCACTATACATACACAGTCCGTAAGGCTATTAAGACAC	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas3,cas7b,cas8b4,cas5,cas6

The CRISPR arrays of NZ_CP024591_4

>merge|NZ_CP024591|4|1586498-1586609|CRISPRCasFinder
CTCACTATACATACACAGTCCGTAAGGCTATTAAGACACCAATGCCAGTTTTATTAGACGTATTCATTGATTTCTCACTATACATACACAGTCCGTAAGGCTATTAAGACAC

>NZ_CP024591|4|4|1586498-1586609|CRISPRCasFinder
CTCACTATACATACACAGTCCGTAAGGCTATTAAGACAC	CAATGCCAGTTTTATTAGACGTATTCATTGATTT
CTCACTATACATACACAGTCCGTAAGGCTATTAAGACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_099777740.1\|1582727_1583744_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP024591.1\|WP_077070312.1\|1596005_1599488_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|369506
NZ_CP024591.1\|WP_099777750.1\|1595206_1596013_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|334323
NZ_CP024591.1\|WP_099777747.1\|1591800_1592886_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_099777745.1\|1588183_1590187_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378965
NZ_CP024591.1\|WP_005874865.1\|1579877_1582199_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP024591.1\|WP_099777746.1\|1590552_1591605_-\|hemagglutinin	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777748.1\|1593483_1594743_+\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NZ_CP024591.1\|WP_099777738.1\|1574541_1575627_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_CP024591.1\|WP_005874855.1\|1577361_1578861_+\|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2	cas8b4	cd09715_cas8b4_CAS-I-B	gnl\|CDD\|132526
NZ_CP024591.1\|WP_077083262.1\|1599512_1600934_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP024591.1\|WP_099777739.1\|1575959_1576625_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP024591.1\|WP_143733962.1\|1586872_1586980_-\|DUF1661-domain-containing-protein	unknown	unknown	gnl\|CDD\|285160
NZ_CP024591.1\|WP_005874854.1\|1578871_1579888_+\|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1	cas7b	cd09717_cas7b_CAS-I-B	gnl\|CDD\|132528
NZ_CP024591.1\|WP_099777741.1\|1583743_1584007_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP024591.1\|WP_099777744.1\|1587563_1588154_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_157766540.1\|1574301_1574517_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_088442945.1\|1582218_1582731_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP024591.1\|WP_013815299.1\|1576621_1577365_+\|type-I-PGING-CRISPR-associated-protein-Cas5p	cas5	cd09716_cas5_CAS-I-B	gnl\|CDD\|132527
NZ_CP024591.1\|WP_099777749.1\|1594764_1595214_+\|phospholipase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_099777740.1\|1582727_1583744_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.62825e-164
NZ_CP024591.1\|WP_099777750.1\|1595206_1596013_+\|metal-ABC-transporter-permease	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	1.37891e-50
NZ_CP024591.1\|WP_099777748.1\|1593483_1594743_+\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	1.01529e-83
NZ_CP024591.1\|WP_099777745.1\|1588183_1590187_+\|hypothetical-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	0.00123818
NZ_CP024591.1\|WP_005874865.1\|1579877_1582199_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.86657e-160
NZ_CP024591.1\|WP_099777738.1\|1574541_1575627_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	1.65966e-23
NZ_CP024591.1\|WP_005874855.1\|1577361_1578861_+\|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2	gnl\|CDD\|132526	TIGR03487, cas_csp2, CRISPR-associated protein Cas8c/Csp2, subtype PGING. Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pging (Porphyromonas gingivalis) subtype.	0
NZ_CP024591.1\|WP_077083262.1\|1599512_1600934_+\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	2.87049e-12
NZ_CP024591.1\|WP_099777739.1\|1575959_1576625_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.72872e-36
NZ_CP024591.1\|WP_143733962.1\|1586872_1586980_-\|DUF1661-domain-containing-protein	gnl\|CDD\|285160	pfam07877, DUF1661, Protein of unknown function (DUF1661). This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.	0.000710542
NZ_CP024591.1\|WP_005874854.1\|1578871_1579888_+\|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1	gnl\|CDD\|132528	TIGR03489, cas_csp1, CRISPR-associated protein Cas7/Csp1, subtype PGING. Members of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.	0
NZ_CP024591.1\|WP_099777741.1\|1583743_1584007_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.07151e-31
NZ_CP024591.1\|WP_099777747.1\|1591800_1592886_-\|IS5-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	2.00945e-23
NZ_CP024591.1\|WP_088442945.1\|1582218_1582731_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.12593e-68
NZ_CP024591.1\|WP_013815299.1\|1576621_1577365_+\|type-I-PGING-CRISPR-associated-protein-Cas5p	gnl\|CDD\|132527	TIGR03488, cas_Cas5p, CRISPR-associated protein Cas5, subtype PGING. CC Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pgingi (Porphyromonas gingivalis) subtype, but shows some sequence similarity to genes of the Cas5 type (see TIGR02593).	4.70758e-157
NZ_CP024591.1\|WP_077070312.1\|1596005_1599488_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|369506	pfam07767, Nop53, Nop53 (60S ribosomal biogenesis). This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumor suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins.	1.71181e-08

>NZ_CP024591.1|WP_099777741.1|1583743_1584007_+|CRISPR-associated-endonuclease-Cas2
MYIILVYDIGEKRVGKMLKLCRKYLNWIQNSVFEGEISEVKLLELKSRAAGIMEKEEDSLIIFSSRQERWLEKEIIGKEHSATDIFL
>NZ_CP024591.1|WP_099777740.1|1582727_1583744_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNPGELSRKDNTIRFVPIQEGENGQEQAGQARYIPIEGISDFYVFGSLRANSSLYNFLGSNDIAVHFFDYYENYTGSFMPRDFLLSGKMLLAQASAYKNKKKRLFLARKFIEGAASNMQKNLAYYNNRGKDMQPMMELIDKYSLRLEETTTIEALMGIEGNIRQAYYDAFNLIIDPFEMGVRSKQPPQNEVNALISFGNMMCYTLCLKAIHQSQLNPTISFLHTPGERRYSLCLDISEVFKPILVDRTIFKVMNKRIIQAKHFDKQLNKCILNPSGKKLFVQAFEERLSETIRHRKLNRSVSFRHLVKLECYKIAKDILGIEEYQPFKMYW
>NZ_CP024591.1|WP_088442945.1|1582218_1582731_+|CRISPR-associated-protein-Cas4
MNTISGTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPERYQELELDGIKIDFYDAKNRVVHEVKKSNKISPAHRLQLLYYLYVLERNGVSGATGILEYPTLRKKEEVILSDVDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCFSGEEQ
>NZ_CP024591.1|WP_005874865.1|1579877_1582199_+|CRISPR-associated-helicase/endonuclease-Cas3
MINKESPILAKPSGITLDVHAENVIQEGALLLKGLGCTKEKYFQTTAKQIVQRVELACKYHDIGKRNKIWQDACKKDYKAYLIWKKIHPNKSFEDYTIECREEAGKFLRQTHVRHEFYSIKGLLNNNPPPNNNPPYWLKIAIAAHHRKLSMKHEERWLSSDEDICSVWKDIRRLSNYFFDDRNSVLSDIAIKQYEFAGPRSLLQLADHRASAKEESKCIPDPIAFSYTFPEKWEKRPVQKLVEKHWRDELLLVRAPTGAGKTDAALLWASHQIKHRKADRLIIAMPTRFTTNALALSVSSTLSSTGLYHSSAWTQNFSSKIDNGEIALEQARYYHNQARLLQTPITVCTIDHLLSSLTLCDEEHQTITFALANACLVIDEADFYDQFTQANILVLLEVLKYWKVPILLMSASLPDNIVQEYRKIGYDIKHILEDTSDIERARFSLIEKRDVSEISQMQDLLQLCLDRGSAIIFANTVDRAQAYYQWFLENGHEEEVILYHSRYTETDKIEKEAQLLLRLGRSAWDNDRANGVAILTQIGEMSVNISADIMISDLCPIDRLTQRCGRLCRFSRKIGDLYIIRPMREGNLFPAPYYQNVGPSQKLEPNDALIQTDELLEKGMYSAANLVQLLNKVYANQTVFSTEASRNADRLREMFKANWLINPIEYLDEEIGSTNFWRARNIMPRCRIYIKRPLQSFRNYSDFRRWETDVAIDIPIYVIKKAMRMSDTVCSQVKVCIGKNDYTLIVINAKCYNNVRGLFFSESVLEEPNFEFL
>NZ_CP024591.1|WP_005874854.1|1578871_1579888_+|type-I-PGING-CRISPR-associated-protein-Cas7/Csp1
METKKIAGVLVTMVAPFENHMANGGEKLFGNASSIKRRPDGRVYVSGQMQRHVLFSAIDRLNHLDKAKGTTFVSNGDGITNLIEIDLRADLGGFMHTNKGDYSDRRIAPLSVTPATALDTSSVGRDLLVRIRFDKSSDAKNQALATREYSEQDKMNMNFFLDITSVGVSKSFVYKDGLNLGTKYFKHITDDEKKRRVKLFLEATRIMNDYANQARNAVCGEPEKVLIVFDDRLSRKACRYYTVGEKEQANIIKELDQYQVKYFVGDDASDYSVADAYRDAMNYLDKATLVDFAEGEEIMTFAEAFECKEKEPQEKKSKKGKDKATSAQNLFAEQQDDQ
>NZ_CP024591.1|WP_005874855.1|1577361_1578861_+|type-I-PGING-CRISPR-associated-protein-Cas8c/Csp2
MNTNHYYIRYGCAITLYDNHVSERERLTPKELRFSIEKAVSSFRIQAQEPFSPGSKARFSFVKRKDGNTKNGIFLSPHIVTKDMHAQKVWTKASKFLEIDYLGKDNEREGLLKKDNVSMSNIPISGEYLTFGEKDTGRGSAKISVEEQTYGLITTLTPLKPALQVGKDNFCIIPDIPLNQMVDFIALFDKMQITHLSGEAMLGNIDNKGIPHRPKIFRGNFPNSPKSDRMGAIALLGAIGEFAKHAEFSTLAQKVLDSLKGSTLYLITYGNAIPFTFHHYIIDLAKEGKLHSIVDSLFYSRLYKKEKRVYGDTDYDRFDFFTNRFLQSFNKAAFDDFFSSRVEYPNQIKILFQMFFTKMEKLKTDVIASAQILGSWLNQVAYFAAKEEADSRISPGNIFEEKAKFLVMMESSIYAAKRGDALIAQILILAGRLSKNEAPKEALLFMEKTITGEIDLSVAKNLLIAYMRIRREEKQRDLNSVKNDDAIPSDINIDDLTNT
>NZ_CP024591.1|WP_013815299.1|1576621_1577365_+|type-I-PGING-CRISPR-associated-protein-Cas5p
MKYNMKNIDLSILGKDPDLSASIKLHIEPHAPISMVSELPGSYYKALLYPDKHILCGLFENVLGWHFSRKDREIITKEIKNIRKKAKKGYIPPTIRSIFIPLLSDFFELDSVRIVSTDSPFFYNDLWKRAFRRKDAGKIHFGGTQNIDYTLVMDKFRFMCENERALETEEKTDQKEEKFLRENIDRISFFYTTPTNREYLFFEGNYECVIKMDPQLVDLLSKTLPQQNMGYLGNSEGWVTLYLEEKS
>NZ_CP024591.1|WP_099777739.1|1575959_1576625_+|CRISPR-associated-endoribonuclease-Cas6
MRIELSIKADDSLVSFSHQHLLVGTLQKWLGENDMHGKSISYSFSRLNGGKLVSELNSILFADWANMFVSAHDPELIRRMLAGIRQDPEMFKSLCVREVTVIEDPDMTDREIFFPASPILLKRWREDNGFDHIVYTDEAANALLTENLCKKLQAVGIDDPTATASFVPDQGKAKVMLIDYRGVKNKASWCPIRIIGNAETKLFAWNAGIGNSTGIGFGAIK
>NZ_CP024591.1|WP_099777738.1|1574541_1575627_-|IS5-family-transposase
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVERLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGPIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>NZ_CP024591.1|WP_157766540.1|1574301_1574517_-|hypothetical-protein
MQVAPQRGDLQLLSLLTATPFTRSFYAKNSSSLHLLILQRSHTVMLWHKERGYGEGEFPFVTASRHAEGEI
>NZ_CP024591.1|WP_143733962.1|1586872_1586980_-|DUF1661-domain-containing-protein
MAREFFTSRTKTKKFPRHVFQSVDSLLQRVRYPLL
>NZ_CP024591.1|WP_099777744.1|1587563_1588154_+|hypothetical-protein
MKRTLVFLFLTAVLALRAEAQSAPEQSETKDFIFSPQKEMVYVAIGYPAGIGLPSLDNYNVEGASASFAVGYERGVKQLAEGLLLSIYAELDWAAFRSVSDKRSLPFSDDSVQDRFRFLAGAGVHKRLNPNIELYARGAVGASFFPENNGSSSRELKGGFNVSLRVGLSCSLRDNFAVFIDTGTSDIVRGGLALMW
>NZ_CP024591.1|WP_099777745.1|1588183_1590187_+|hypothetical-protein
MKPLLTVVCAILLSLPLGGQTVVPEWDEYIAEQIESGALGEDEGAEFLERWMVQKQHPLDINTLTREDLEQFPFLNEFQIRRFLLYRRAHPEGFDSIWVLNEIAGWDRRTCLLLWPMLTVQKRSEPAVASFREILSYARHDVSVHTDAILQRQEGYRPDSRHPYRGDPWGGGLRWSYAMGNRFSLGLTASKDRGEPAFDKRRKGFDSYSAHFFMEGKGAVRAVALGDYRIGMGYGLLVNQASFMGMAYAYPRGGTTLRRAFTYAEDNFMRGAATALAQGRWALTAFYSRKGIDATVTEDGAIKAIYHTGLHRTDAEIARRNAATMTTAGTSVSYTDDRLRLTFNLLHLHWGGLRLLRAVGTQGIASLTDLERFSLVSADYSYLFGQGEAELFGEFAGAANGAVGTINGLRYTHPVGGSYMLVGRYIPADYWSYYRGAFARHSRPGNEWGVMGRAAWELPSAWTVRAFADYYGSFVPRFGRKEKTEALYWMFEGEKRLSALSWSCRIRGTGDKRYRRSLAVRLRGRYVFDERWRLMASLQWSRSNSFDGQQQVWQAPTGGKSFALRADYSGGKLLRVCSMDAVAFDTDSFADRLYEAVHNPRHHYSSAFFYGRGVRLGVFVRIAPLPHVEIESRTDHLLRRDTDTIGSAGELICGQARTHLFMTVRYR
>NZ_CP024591.1|WP_099777746.1|1590552_1591605_-|hemagglutinin
MTVENLRLQRLQNLEHYRFAKNVLTLCRTANIAKLNPKLPELEKAIEMEDLALNPPVANELTPQVIALDEERDRAYQALMSRVRSYAFDEDSQLRNAAARIEDVAARYGNVIRMNYDKETAAIENFLTDLKGENIRPLVTKLGVTALVDRLEKNNKAFADFFLRRLSTDQRGKYDVKALRAETDRTLVAVVRRMDSIDDMEPSPEIRALIELYNRLVANRRALLARRASYGEAAVEKRRAEIAEMLRPLLARIVEEKKTAVFAGRTLGTGKNRHYLITFVAENGDEEDRWYRIDREQLVYVPEDELPKPKKKKKPASSTGTPSEPPVLPDPSQGGSSSGGGEQGSTGGGL
>NZ_CP024591.1|WP_099777747.1|1591800_1592886_-|IS5-family-transposase
MAYQSKNTDEHVTFADALLSKRYRKAQNDFLNQVERLIDWRPIRTLINKKYTKRQNAIGAPAYDVILLFKMLLLETWYNLSDCALEERINDSITFSRFLGLKMEEVSPDHSTISRFRSALTELGLMDKLLAQFNKQLSRHHISVREGVLVDASLVETPHKPNGTITIEVADDREDNRSEEEKEAEEDYQKQVVRQRKGTDEEARWVYKQKRYHYGYKKHCLTNVQGIVQKVITTAANRSDTKEFIPLLQGANIPQGTAVLADKGYACGENRSYLQTHHLQDGIMHKAQRNRALTEEEKQRNKAIGRIRSTIERTFGSIRRWFHGGRCRYRGLAKTHTQNILESIAFNLYRTPGIIMSSSVG
>NZ_CP024591.1|WP_099777748.1|1593483_1594743_+|3-phosphoshikimate-1-carboxyvinyltransferase
MKRLHCTFNPKSQTVDVSLRLPPSKSEWIRLLLLRAMSGEVLAPLEGDAPTDVRTVHRILTSDISDEVNVRDAGTAMRFLTAYMARFASRPVRMYGTERMCARPIRPLVEALRSLGADVIYERVEDFPPLLIRPAAMRGGTVCVDAGVSSQFVSALLLIAPTLRGGLSIKLENREVSAPYTDMTCRLLTAFGIEVERSEDSITVGERPFAAPTEWYPSADWSAAGYIYNMVAVGELSGSVSLPDLLPPEESMQADSRAAALFGRLGVVTEKTDSGITLSYSPVRCTDDFGTEDVRDCPDLVPTLAVCCLLKRVPFCLTGVGHLKLKECDRLAAICTEARKLGYVVRSDKDALLWDGERCTPEELPVIRVYDDHRMAMAFAAAAVLSKKGVMIEDAGVVGKSFPGFFSVSRLLGFDGEEI
>NZ_CP024591.1|WP_099777749.1|1594764_1595214_+|phospholipase
MSNILILIIGVLVLGLVAALTEIRHSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEFEEILSTLQEEEVPSWIRSLQMRQIQMPISIKEQALFIVSEHRIQHKHRHDD
>NZ_CP024591.1|WP_099777750.1|1595206_1596013_+|metal-ABC-transporter-permease
MIEALQYGFFRNAIAGSLLTAIVCGLLGSYVVARRMVFVSGGITHASFGGIGMGLYLGINPFLSAAVFAVLSALGVQGVTRAGLLREDSAIAAFWSLGMALGTLFIALTPGYSTGLSSFLFGNILLVSHTDLLLLALMALVMIAVFVFGYRTILYTAFDPDFASTRGIRVHLVEMLMSVAVAVGIVLSIRLVGIMLLMSLLTLPQSIMNLFTSRFSSILFGSVILAALAAFTGLWGSYSLGIPSGAFIILVLAALFLLAKTIKSFVHA
>NZ_CP024591.1|WP_077070312.1|1596005_1599488_+|tetratricopeptide-repeat-protein
MRSHRFLYLLVFYLLIPVAVVFGMLSCSTSKNTAASRFYHNFTTRYNVFYNGQNAYNDAYDRLLESHTEGYSEEIFLDPITAQSGQEKAKEGGAFDQAIVKGRKAIHLHSIRTKPERKQGWQSDPKAVAFQNKREYNRFLHNAWMLVGKSQFYNADFLQAQATFSYIARLYSNEPIIRDEARLWQVRCYSEMGWLHEGERLLERIPKDLPHVDRRGLYSLAVAERSILSGDKRAAIPYLQQAARQEKNKRQRARMYYLLGQLLQENNRPEEARKAYSKVLRASPPFALDFAARIRKMELEGERNPRTVAARLERMAKKGKYKDVLDQIFYAAGNIYMDIPDTLAAIKTYTTGIEKSTARGADFALCQIRLGDIYMQRKQYLKAQPCFSAAAGVLNRLNPDYKRVAELSSRLDELVGHAKVVHEQDSLLALAAMPEEQRLAIIDSVINAYAIAEKKRLEEEEMAKLQQSQELFNAESEGFAPSAGGKTQNPPPGMQMGGASGEFYFYNPQLIAQGKAAFERKWGKRVLEDDWRRRRKQANFDIPTDDSSTAEETDETQPGTLMTEEELQAAAADSATSNPLNREYYLAQLPMTEDAKEAAGKLIAEGLLGMGAVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRALILQYYPEDNLAKALSNPDYLKELAAMDRRQNELYGQAFDSYLKGVVGSVRKSRNECRERFPLSELAPKFDFLNALCYVLESDSKGFTSALKQLVKDYPKADVTELASSMLTELLRGRSIVQGGYTGIDWDIRWGSSDTDSISPDSLPPFVKPKSFERTRLILLAPAGTLNKNRVLFALASFNFSRYTEQTLEIVQSTVGAFDQWLMTSLPTPRMGWQYIKDAFAPNGFMSAMGESSLLFPISESNYQLLVKGKSIGQYMTFLAKEEVPETAFVLDRWQQMTGRAQAVGKEDEDIEPAGTPAPIVSDKNEAEDTARDSTSGTDRKPLVSIKPHKDSIMTATPITFDIDREQILSGAKPVAADSSAADTISDAAALPSLKQQEGKDVSVEQIQRLAKERAQNEKDEKKALEKAKREKERDRKRELKAREKEREKARRDKLKDQRLKQKEREQKLKEKERERKEKLRQRERERKARAKEREQKKKAGQNKSGGGPQ
>NZ_CP024591.1|WP_077083262.1|1599512_1600934_+|alpha/beta-hydrolase
MKHKVIIIIYVVVLLMTTMSCKSQKFAGDWSGRIPRGNGSLALVVHLKQTGNTWQGTMDSPDQQAFGIPLSSVTVVGDSLSIAVQDLLLSYKGKLKNDSIEGEFRQGRFGTMMSLYRGLDAAKPYRPQTPVPPFPYDVTDVKILHKTGGFTIAGTLTAPKDANKTKGTVILISGSGLQDRDETIFGHKPFAVLADQLTRHGYAVLRCDDRGFGESAGDASQATTDTLAGDIESELAYLRQHYPRLTDKVFLIGHSEGGIIAPMVARRVGGIAGLVLVGAPSVKGAEILLSQNAAMDEFATGQPQSQAKRAALEELIRQATAPGDSSDIRTRIESYCRSNASVLFPQAMTDEMKEQGIKLMTEQLSNPWMRHFLTYDPAPLLDVTSGEGSHPLPPTMAIYGGRDKQVLHEVNMSKMKSLLGIETGNTTNKVVYLPEVNHIMQPAEFGTPDEYAFLNRTVDTELMEIVCSFLDSL

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Crispr_ID: NZ_CP024591_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_5

1826715-1827146

TypeVI-B2,TypeVI-B1

VI-B2

Consensus_repeat	Method
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	PILER-CR
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CRISPRCasFinder
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CRT

6 spacers

Csx28,cas13b,cas3

The CRISPR arrays of NZ_CP024591_5

>merge|NZ_CP024591|5|1826715-1827146|PILER-CR,CRISPRCasFinder,CRT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAACTTTTCACTTTTTCTTCTATTCCATCCATCTGTTGGATCTACCCTCTATTCGAAGGGTACACACAACCAGAGGTCTTGGTCAATGATTTCCTTTACTGTTGGATCTACCCTCTATTCGAAGGGTACACACAACTCTCTGTGAGGACGGCAGCGCAGAGCGTATGTTGGATCTACCCTCTATTCGAAGGGTACACACAACTGTTTAGATTGTCTGAAATTACTTCTACGGGTTGGATCTACCCTCTATTCGAAGGGTACACACAACTGTTTCGTTGTAGTCTTCATCGAAGTAACGGTTGGATCTACCCTCTATTCGAAGGGTACACACAACTGTTTCGTTGTAGTCTTCATCGAAGTAACGGTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>NZ_CP024591|5|5|1826715-1827146|PILER-CR
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TTTTCACTTTTTCTTCTATTCCATCCATCT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CAGAGGTCTTGGTCAATGATTTCCTTTACT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TCTCTGTGAGGACGGCAGCGCAGAGCGTAT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTAGATTGTCTGAAATTACTTCTACGG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>NZ_CP024591|5|5|1826715-1827146|CRISPRCasFinder
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TTTTCACTTTTTCTTCTATTCCATCCATCT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CAGAGGTCTTGGTCAATGATTTCCTTTACT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TCTCTGTGAGGACGGCAGCGCAGAGCGTAT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTAGATTGTCTGAAATTACTTCTACGG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

>NZ_CP024591|5|4|1826715-1827146|CRT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TTTTCACTTTTTCTTCTATTCCATCCATCT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	CAGAGGTCTTGGTCAATGATTTCCTTTACT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TCTCTGTGAGGACGGCAGCGCAGAGCGTAT
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTAGATTGTCTGAAATTACTTCTACGG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TGTTTCGTTGTAGTCTTCATCGAAGTAACG
GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_099777810.1\|1833173_1835270_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP024591.1\|WP_099777803.1\|1820818_1821721_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NZ_CP024591.1\|WP_143740089.1\|1839757_1839850_+\|DUF1661-domain-containing-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099778026.1\|1838153_1839596_+\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234
NZ_CP024591.1\|WP_005873786.1\|1827959_1829159_-\|methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|168478
NZ_CP024591.1\|WP_021676670.1\|1818887_1819796_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP024591.1\|WP_099777802.1\|1816683_1818660_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP024591.1\|WP_021676678.1\|1831487_1832093_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP024591.1\|WP_099777809.1\|1832102_1833131_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_CP024591.1\|WP_043890086.1\|1813518_1814421_-\|glutamate-formimidoyltransferase	unknown	unknown	gnl\|CDD\|226169
NZ_CP024591.1\|WP_012458422.1\|1815489_1816008_-\|DUF4496-domain-containing-protein	unknown	unknown	gnl\|CDD\|273496
NZ_CP024591.1\|WP_099777808.1\|1830793_1831387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_021664576.1\|1825959_1826505_+\|hypothetical-protein	Csx28	-	unknown
NZ_CP024591.1\|WP_099777805.1\|1822595_1825955_+\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NZ_CP024591.1\|WP_021663085.1\|1835269_1836040_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319829
NZ_CP024591.1\|WP_012458423.1\|1814461_1815457_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777811.1\|1836134_1837589_-\|internalin	unknown	unknown	gnl\|CDD\|380191
NZ_CP024591.1\|WP_061156468.1\|1819806_1820766_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP024591.1\|WP_099777807.1\|1829321_1830791_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|277318
NZ_CP024591.1\|WP_053444418.1\|1821740_1822307_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_099777807.1\|1829321_1830791_-\|metallophosphoesterase-family-protein	gnl\|CDD\|277318	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.04552e-14
NZ_CP024591.1\|WP_099777803.1\|1820818_1821721_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	8.98674e-126
NZ_CP024591.1\|WP_099778026.1\|1838153_1839596_+\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	2.09589e-91
NZ_CP024591.1\|WP_005873786.1\|1827959_1829159_-\|methionine-gamma-lyase	gnl\|CDD\|168478	PRK06234, PRK06234, methionine gamma-lyase; Provisional.	0
NZ_CP024591.1\|WP_021676670.1\|1818887_1819796_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.38413e-12
NZ_CP024591.1\|WP_099777802.1\|1816683_1818660_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP024591.1\|WP_021676678.1\|1831487_1832093_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	7.38277e-99
NZ_CP024591.1\|WP_043890086.1\|1813518_1814421_-\|glutamate-formimidoyltransferase	gnl\|CDD\|226169	COG3643, COG3643, Glutamate formiminotransferase [Amino acid transport and metabolism].	1.54603e-150
NZ_CP024591.1\|WP_012458422.1\|1815489_1816008_-\|DUF4496-domain-containing-protein	gnl\|CDD\|273496	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe. [DNA metabolism, Chromosome-associated proteins].	1.34591e-52
NZ_CP024591.1\|WP_099777810.1\|1833173_1835270_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP024591.1\|WP_099777805.1\|1822595_1825955_+\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
NZ_CP024591.1\|WP_021663085.1\|1835269_1836040_+\|HAD-hydrolase-like-protein	gnl\|CDD\|319829	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.94834e-37
NZ_CP024591.1\|WP_061156468.1\|1819806_1820766_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.84622e-96
NZ_CP024591.1\|WP_099777809.1\|1832102_1833131_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP024591.1\|WP_099777811.1\|1836134_1837589_-\|internalin	gnl\|CDD\|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	1.54502e-35

>NZ_CP024591.1|WP_021664576.1|1825959_1826505_+|hypothetical-protein
MMTMTICWTPICVQLIKLSGIFIAAYLAYRYAVHKLSKESIENIERCKYQAVLEAHRSFYKLLRFTTDTENADSILVWQKAKGGGAKTYYFRPACIRGFLSELTDEFYKNGNGIFLSKEIISRIFEYRSIVYGLLLSERQNSDERVVMNKPETAERMISIHQELTQTVREAIALKKRTLNF
>NZ_CP024591.1|WP_099777805.1|1822595_1825955_+|hypothetical-protein
MTEQNERPYNGTYYTLEDKHFWAAFFNLARHNAYITLTHIDRQLAYSKADITNDEDILFFKGQWKNLDNDLERKARLRSLILKHFSFLEGAAYGKKLFESQSSGNKSSKKKELTKKEKEELQANALSLDNLKSILFDFLQKLKDFRNYYSHYRHPESSELPLFDGNMLQRLYNVFDVSVQRVKRDHEHNDKVDPHRHFNHLVRKGKKDRYGNNDNPFFKHHFVDREGTVTEAGLLFFVSLFLEKRDAIWMQKKIRGFKGGTETYQQMTNEVFCRSRISLPKLKLESLRTDDWMLLDMLNELVRCPKSLYDRLREEDRARFRVPVDILSDEDDTDGTEEDPFKNTLVRHQDRFPYFALRYFDLKKVFTSLRFHIDLGTYHFAIYKKNIGEQPEDRHLTRNLYGFGRIQDFAEEHRPEEWKRLVRDLDYFETGDKPYITQTTPHYHIEKGKIGLRFVPEGQHLWPSPEVGATRTGRSKYAQDKRFTAEAFLSVHELMPMMFYYFLLREKYSDEASAERVQGRIKRVIEDVYAVYDAFARDEINTRDELDACLADKGIRRGHLPRQMIAILSQEHKDMEEKVRKKLQEMIADTDHRLDMLDRQTDRKIRIGRKNAGLPKSGVIADWLVRDMMRFQPVAKDTSGKPLNNSKANSTEYRMLQRALALFGGEKERLTPYFRQMNLTGGNNPHPFLHETRWESHTNILSFYRSYLKARKAFLQSIGRSDRVENHRFLLLKEPKTDRQTLVAGWKGEFHLPRGIFTEAVRDCLIEMGYDEVGSYKEVGFMAKAVPLYFERACKDRVQPFYDYPFNVGNSLKPKKGRFLSKEKRAEEWESGKERFRLAKLKKEILEAKEHPYHDFKSWQKFERELRLVKNQDIITWMICRDLMEENKVEGLDTGTLYLKDIRTDVQEQGSLNVLNHVKPMRLPVVVYRADSRGHVHKEEAPLATVYIEERDTKLLKQGNFKSFVKDRRLNGLFSFVDTGGLAMEQYPISKLRVEYELAKYQTARVCAFEQTLELEESLLTRYPHLPDKNFRKMLESWSDPLLDKWPDLHRKVRLLIAVRNAFSHNQYPMYDEAVFSPIRKYDPSSLDAIEERMGLNIAHRLSEEVKQAKEMVERIIQV
>NZ_CP024591.1|WP_053444418.1|1821740_1822307_-|hypothetical-protein
MVFNFLIVSDEVEDFRREIAIDSEATFLDLQNAILDSVGYSHSELTSFFLCDEDWHKGQEITLMEMDTASDEDSYVMENTRLEEFIEDEHQRLVFEFDLMTERYFFIEVMDIVPGKSLSEPKLLTSEGLPPQQSSLDDLMDPAIPTKQARGLDLEEDFFGDSEYNEDEIDREGFEGFDEITPDLSDNY
>NZ_CP024591.1|WP_099777803.1|1820818_1821721_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
METQDHTLYVLLGPTGVGKTDLSLDIAERLGSPIISADSRQIFRELPIGTAAPTPEQRARVPHLFVGTHSVRDYYSAGMYELEVLEALKELFRKYRGVLLTGGSMMYIDAVCRGIDDIPDPFPEVREELYARYAAEGLDGILAQLRLLDPDYYATVDRRNYKRVIHGLEICLSTGRPFSSFHRHEAKERPFRIVKIGLYREREELCRRIDARVLEMMEQGLEEEARAVYPLRHLNALNTVGYKEMFEYFDGSIDRAEAVRRIQRNSRVYARKQMTWFRRDSMIRWFHPEADKGTVLTLVT
>NZ_CP024591.1|WP_061156468.1|1819806_1820766_-|glycosyltransferase-family-2-protein
MDVNTTYTKELSIIVPIYNEERELPELVRRLSAAAASITEDYELIFVNDGSSDGSMELLRSLCKGDDRFFYINLSRNFGHQIAVSAGLDHVRGKATVIIDGDLQDPPELIPELYAKYREGYEVVYAQRKHREGETWFKKATAKGFYRTMRKITSIDMPLDTGDFRLIDRKIVQCLREMPEQNKFLRGQIAWMGFRQTGVQFDRDERKYGQTNYPLRKMLALAIDGITGFSSRPLEWVAQLGAWVSLLSLFVIVYALISHFLLDKTVSGWTSVIVSSMFLGGVQLICLGVIGTYISKINKNIVARPLYLVAESNIAADER
>NZ_CP024591.1|WP_021676670.1|1818887_1819796_+|DMT-family-transporter
MTSSRLYGLAVGILSSATFGLIPLFTLPVSAKGASFELILFYRFFFAAIAIGILHRLSGGSFKVSRADIGPLVLLGFLYAGTALFLFHGYGYMASGVATTIHFLYPLFVTALMLLFFGERLSPVPLTAIFIALIGVGLLMGLTGGGDRVGLTGFVIVAISALCYALYIVFVNRSRVRIMPGRRLTFYVFVAAAGFCLINVLVRQGEVAPLPDAASWGNILLLALVPTVISNLALVVAVRNIGSTLTSALGAMEPLTSVLVGVWVFDEVLGASAIVGMGCILIAVGLIVFSEPLELMLRRRRR
>NZ_CP024591.1|WP_099777802.1|1816683_1818660_+|transcription-termination-factor-Rho
MQKYTIVDLNEKAEAELAAIAGELGIANAGSMPKQELIYKILDEQAISVAGVRKEKQKTTEDRHTERRKPGRPRKNAEEEAPESEDVAAAPAEPNDEEAQAKRKRGRPRKAAEEIAEETREDVQQLVALAAAEETNATEKESAGRKPAAKTSTASPAKAPAKALPRPAETTPRVAPSPPSTTPVSEPAKDDAKPETPAPPPAIESITTTPAAGAVDEGGARRLVFRHKNSSSVLDQVLPYSSPQPPQRPKPAGAPVGSSPIRQRQPAGVPTPRREPQQSLYNFDGILECMGVLEIMPDGYGFLRSSDYNYLSSPDDVYVSQQQIKHNGLKTGDVVAGTIRPPREGEKYFPFVQLRSVNGRSPEEIRDRVPFDHLTPLFPEEKFTLEAPGIRAVNDKISVRVVDLFAPIGKGQRGLIVSQPKTGKTMLLKDIANAIAANHPEVYMIVLLIDERPEEVTDMARSVNAEVIASTFDEPAERHVKIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNIENGGSLTILATALTDTGSKMDEVIFEEFKGTGNMELQLDRRLSNKRIFPAVDIMSSSTRRDDLLQDETTLNRMWILRKYLSDMNPVEAMEFVRKQLENTHTNMEFLASMSN
>NZ_CP024591.1|WP_012458422.1|1815489_1816008_-|DUF4496-domain-containing-protein
MSLKYVIKKSVAKIGPKAGQTIYYAQPAAQDSVTFHSLCKRIAEESALTSADVKGILDRLVNILSEELPNGKTVRIGELGSFRLSFGSKQLDDPKNFSVDQIQKHRLVFIPSAELKSIPARGKLRPGSSALAFDYERVEPQPKKKPGTGDNQTPSPSTPGGGGGQGGTGGGL
>NZ_CP024591.1|WP_012458423.1|1814461_1815457_-|hypothetical-protein
MFRISRLGIVLLVSLIACNLSKAQNTTKDLINLSIKYLEQNDSTAFRKTYQDIFMQYVTEALCAPFDKAIQDRDQTYIQARLDSLTSDPEEDAFTYHLLSKPEYQAFYYTLPRWEVYKSWIDSVERNPHADMRNEIWQIQREDQGIRILWLRLPNETGDNIRKKVRDEILLVDRQNTERAIHIIDTFGEWPGANRLGCSADQTLWLCIQHADQRPEVATRYLPMLQKAVEEKRTDPMHYAYLVDRIRMHECKEQIYGTQTYHVKEENGNKFFFVIPIEDIDHVDERRAGIGMDPLSDYVNSMGYDWDIRQYKKDLPKIWKYYRHSCKKKKN
>NZ_CP024591.1|WP_043890086.1|1813518_1814421_-|glutamate-formimidoyltransferase
MALSRIMECVPNFSEGRDREKIEKIVNPFRTREGVKLLNYSNDEDHNRLVVTVVGEPEPLREAVLEAVGIAVELIDLTKHTGQHPRMGAVDVIPFIPIKNVTAEDADALAKEVGRTIGEKYGVPVFLYEKSATAPHRENLAKIRKGEFEGMAEKIHEADWHPDFGPADRHPTAGTVAVGARMPLVAYNVNLNTNDLSIADAIAKKVRFLGGGLRFCKAMGVELTDRGIVQVSMNLTDFTKTAVYRAHEMVRMEAARYGVSVVGSEVIGLVPMQALIDCAEYYLGIENFSMDQILESRIME
>NZ_CP024591.1|WP_005873786.1|1827959_1829159_-|methionine-gamma-lyase
MKKEDLMRSGFATRAIHGGAIENAFGCLATPIYQTSTFVFDTAEQGGRRFAGEEDGYIYTRLGNPNCTQVEEKLAMLEGGEAAASASSGIGAISSAIWVCVKAGDHIVAGKTLYGCTFAFLTHGLSRYGVEVTLVDTRHPEEVEAAIRPNTKLVYLETPANPNMYLTDIKAVCDIAHKHEGVRVMVDNTYCTPYICRPLELGADIVVHSATKYLNGHGDVIAGFVVGKEDYIKEVKLVGVKDLTGANMSPFDAYLISRGMKTLQIRMEQHCRNAQTVAEFLEKHPAVEAVYFPGLPSFPQYELAKKQMALPGAMIAFEVKGGCEAGKKLMNNLHLCSLAVSLGDTETLIQHPASMTHSPYTPEERAASDISEGLVRLSVGLENVEDIIADLKHGLDSLI
>NZ_CP024591.1|WP_099777807.1|1829321_1830791_-|metallophosphoesterase-family-protein
MQKKRSNPYYKVSRRKFSKRNSGRRYSRKRRRNGRRRGLMISLLLLVALGIWIAKRYRAWFVSPAEVAYTVPHTIDRLTLTPGEDFLTQRTVSWRCDTLPQDSWLDYRSPDGADADTLLISLPAEGKEVLTRAGRNYYYHAKINGLKPGRTYTYRVKTGEQTSPWYRFSIPDSSAATDFIYIGDVQDPGNGGSQALLQRLRTLHPNPDFLALGGDQIEGPTDFYWEVWHRVIGDWTASTPVIAATGNHEYIKGLKRQLDPRWVPQYNYPANGPKGFERRSYYIDFPHMRLIVMDTNDIQWPASVFNHRTWLKNALETTVQPWKVVMFHHGVYSVRQGRMNPIIRYGFRSILEEGGADLVLQGHDHAYSRITTKTESGTKTTPVYIISSASPKHYRNGFSEQHDRIGSGLYLYQTIHVTQGEIRYRSTTFDNRPYDDLHLKKQGGRTTVKDNAEDWKEIFAFDNFADSKKGRKKRADYRQAAQERAAGHR
>NZ_CP024591.1|WP_099777808.1|1830793_1831387_-|hypothetical-protein
MNKSLIILIYTLVWVLLIVLQSLALESANPGTPSFWNTPSAYYSVWIVDAYIIALYYINYFLIAPFMIKRHLFRPYIVLSLALGGIGMLLPVVFHHAWQWTIPGTSEGQMPLYGEGFIASIAAIAVGLSVRGVREWVRLARRNTNLEIALKNKSIAYNRAEARLRSLEQPVSFHNPGTGAKAENAPSSTPVSPQTNE
>NZ_CP024591.1|WP_021676678.1|1831487_1832093_+|YihA-family-ribosome-biogenesis-GTP-binding-protein
MEIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILSREQLSSLFVLIDCRHEPQKIDLEFLQWLGENGIPFSIVFTKADKLSFSRLKENTEAYKQKLLETWEELPPVFITSSEKKTGKEELLDYIDSINQELATK
>NZ_CP024591.1|WP_099777809.1|1832102_1833131_+|UDP-glucose-4-epimerase-GalE
MKQKILVTGGTGYIGSHTTVELQQAGYRVVSVDNFSNSNAAVLDGIARITGVRPDFYEADCNDTEAMERVFTAHPDIAGVIHFAASKAVGESVQKPLLYYRNNILSLLNILELMERFGTRGIVFSSSCTVYGQPEVLPVTEEAPIQEALSPYGNTKQINEEIIRDAIHAGAGYKAILLRYFNPIGAHPTAHIGELPNGVPQNLIPYLTQTAAGIRAELSVFGDDYDTPDGSCIRDYIYVVDLAKAHVAAIERMLNEEKASDSLEIFNIGTGRGVSVLELIRTFERVTGVAVPHRIVGRRKGDIEQVWAEPKKANEVLGWKALESLEDTLLSAWRWQQRLSEK
>NZ_CP024591.1|WP_099777810.1|1833173_1835270_+|ATP-dependent-DNA-helicase-RecG
MDILSTKITYLTGVGPKRAEVLKEEIEVRTYLDLLHYFPFRYVDRSRFYAIREIRSDMPYIQLRGVLRNFSEVGEGRRKRLTATFSDGTGSIELVWFKGIKYIRDKLQEGRRYIVFGKPVFFASGYNIAHPEIDAEEKAERVAGGLTPIYHTTERMKSMGLGSKQLQQLLYVLLNQVSATLTETLPPYILSSYGFVSYQEAIRQIHFPQGVAQLEAARTRLKFEELFYVQLHLIGSKLERKARFQGIVFAQVGALFNTFYKEHLPFELTGAQKKVVREIRQDTLSGHQMNRLVQGDVGSGKTLVALLSMLLALDNGCQACLMAPTEILARQHHHTLSELLRSLGIEVGLLIGSCTARQRERLLPRLADGSLSIVVGTHALLEQGVSFRRLGMAVIDEQHRFGVQQRARLWEKNLDTLPHILIMSATPIPRTLAMTLYGDLDISIIDELPPGRKSIQTLHHFDNDMAPVFRFLRSQLAAGRQVYVVYPMIEGSETTDLKNLEDGFELFSSIFPDEGVTMVHGKMKAKEKEARMADFVSGRSRILLATTVIEVGVNVPNATVMVVENADRFGLSQLHQLRGRVGRGGEQSYCILITGTKTGEDSRRRIQVMVETNDGFEIAEEDMRLRGFGDLEGTRQSGRQISLRIANPARDTELIALSRSIAEQLLERDPELRHPDNQMLALRLNKLFPKEEDWSVIS
>NZ_CP024591.1|WP_021663085.1|1835269_1836040_+|HAD-hydrolase-like-protein
MEKKESMDYNNITEALQAFRTEKAYRHAPLRSCFFDMDGVLFDSMPAHARSWVEAAGECGIAAEPLDFYRWEGQKGSDTIKILFERGYGRLPTEKEIADMYGRKSQLFALYNSGSVIDDAPALVSDVCDRGLRIMLVTGSSQTDILQRLQRSYGDNFSPVNMVTGADVHRGKPHPEPYLKALECVGMSPPEAFVVENAPLGVRAAVDAGIFTIAVNTGCLPDADLWDAGASLVLPSMAVLRSLLGELLTASLSSSA
>NZ_CP024591.1|WP_099777811.1|1836134_1837589_-|internalin
MKRKPLFSALVILSGFFGSVHPASAQKVPAPVDGERIIMELNEADVECTIKIEAEDGYANDIWADLNGNGKYDSGERLDSGEFRDVEFRQTKAIVYGKMAKFLFRGSSAGDYGATFIDISNCTGLTAFDCFANLLTELDLSKANGLTFVNCGKNQLTKLDLPANADIETLNCSKNKITSLNLSTYTKLKELYVGDNGLTALDLSANTLLEELVYSNNEVTTINLSANTNLKSLYCINNKMTGLDVAANKELKILHCNNNQLTALNLSANTKLTTLSFFNNELTNIDLSDNTALEWLFCNGNKLTKLDVSANANLIALQCSNNQLTALDLSKTPKLTTLNCYSNRIKDTAMRALIESLPTITEGEGRFVPYNDDEGGEEENVCTTEHVEMAKAKNWKVLTSWGEPFPGITALISIEGESEYSVYAQDGILYLSGMEQGLPVQVYTVGGSMMYSSVASGSAMEIQLPRGAAYVVRIGSHAIKTAMP
>NZ_CP024591.1|WP_099778026.1|1838153_1839596_+|exo-alpha-sialidase
MRRTLVKVALSESLPPGAKQIRIGFSLPKETEEKVTALYLLVSDSLAVRDLPDYKGRVSYDSFPISKEDRTTALSADSVAGRRFFYLAADIGPVASFSRSDTLTARVEEVAVDGRPLPLKELSPASRHLYRGYEALFVPGDGGSRNYRIPAILKTANGTLIAMADRRKYNQTDLPEDIDIVMRRSTDGGKSWSDPRIIVQGEGRNHGFGDVALVQTQAGKLLMILVGGVGLWQSTPDRPQRTYISESRDEGLTWSPPRDITHFIFGKDCADPGRSRWLASFCASGQGLVLPSGRITFVAAIRESGQEYVLNNYVLYSDDEGNTWQLSDCAYRRGDEAKLSLMPDGRVLMSVRNQGRQESRQRFFALSSDDGLTWERAKQFEGIHDPGCNGAMLQVKRNGRDQVLHSLPLGPDGRRDGAVYLFDHVSGRWSAPVVVNSGSSAYSDMTLLADGTIGYFVEEGDEISLVFIRFVLDDLFDVRQ
>NZ_CP024591.1|WP_143740089.1|1839757_1839850_+|DUF1661-domain-containing-protein
MVRNFFTSRAKAKKFTRHVFPNCKHENSGT

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Crispr_ID: NZ_CP024591_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024591_6

2030178-2030324

Orphan

Consensus_repeat	Method
AGTATAAAGGGTGGGGGCTTTATAGTATAAAGGGTAGAGGGTTTACAGTATAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024591_6

>merge|NZ_CP024591|6|2030178-2030324|CRISPRCasFinder
AGTATCAAGGGAAAAGACTTCATAGTATAAAGGGTGGGGGCTTTATAGTATAAAGGGTAGAGGGTTTACAGTATAAAGCATGGAGGCTTTATAGTATAAAGGGCAGAGGGTTTACAGTATAAAGGGTGGGGGCTTTATAGTATAAAG

>NZ_CP024591|6|6|2030178-2030324|CRISPRCasFinder
AGTATCAAGGGAAAAGACTTCATAGTATAAAGGGTGGGGGCTTTATAGTATAAAG	GGTAGAGGGTTTACAGTATAAAGCATGGAGGCTTTAT
AGTATAAAGGGCAGAGGGTTTACAGTATAAAGGGTGGGGGCTTTATAGTATAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024591.1\|WP_143733533.1\|2023787_2023952_-\|DUF1661-domain-containing-protein	unknown	unknown	gnl\|CDD\|285160
NZ_CP024591.1\|WP_012458267.1\|2028538_2029999_+\|aminoacyl-histidine-dipeptidase	unknown	unknown	gnl\|CDD\|349885
NZ_CP024591.1\|WP_004585071.1\|2022876_2023725_-\|VanW-family-protein	unknown	unknown	gnl\|CDD\|377286
NZ_CP024591.1\|WP_004584360.1\|2038706_2038988_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_005873441.1\|2032293_2033355_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP024591.1\|WP_004584359.1\|2039000_2039591_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777858.1\|2020823_2022767_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
NZ_CP024591.1\|WP_130267264.1\|2036923_2037136_+\|DUF1661-domain-containing-protein	unknown	unknown	gnl\|CDD\|285160
NZ_CP024591.1\|WP_004585076.1\|2028242_2028458_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099778041.1\|2030870_2032259_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP024591.1\|WP_054190956.1\|2014393_2016277_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223112
NZ_CP024591.1\|WP_099777859.1\|2024926_2027410_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|372685
NZ_CP024591.1\|WP_097561152.1\|2017402_2020630_+\|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit	unknown	unknown	gnl\|CDD\|273581
NZ_CP024591.1\|WP_049782968.1\|2037959_2038082_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_099777860.1\|2033351_2036501_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP024591.1\|WP_004584361.1\|2038476_2038695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_004585082.1\|2036485_2036785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024591.1\|WP_004585075.1\|2027590_2028211_-\|OmpH-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|214922
NZ_CP024591.1\|WP_005875090.1\|2016310_2017384_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP024591.1\|WP_013815838.1\|2038254_2038464_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024591.1\|WP_004585071.1\|2022876_2023725_-\|VanW-family-protein	gnl\|CDD\|377286	pfam04294, VanW, VanW like protein. Family members include vancomycin resistance protein W (VanW). Genes encoding members of this family have been found in vancomycin resistance gene clusters vanB and vanG. The function of VanW is unknown.	1.45821e-58
NZ_CP024591.1\|WP_012458267.1\|2028538_2029999_+\|aminoacyl-histidine-dipeptidase	gnl\|CDD\|349885	cd03890, M20_pepD, M20 Peptidase D has specificity for beta-alanyl-L-histidine dipeptide. Peptidase M20 family, Peptidase D (PepD, Xaa-His dipeptidase; X-His dipeptidase; aminoacylhistidine dipeptidase; dipeptidase D; Beta-alanyl-histidine dipeptidase; pepD g.p. (Escherichia coli); EC 3.4.13.3) subfamily. PepD is a cytoplasmic enzyme family characterized by its unusual specificity for the dipeptides beta-alanyl-L-histidine (L-carnosine or beta-Ala-His) and gamma-aminobutyryl histidine (L-homocarnosine or gamma-amino-butyl-His). Homocarnosine has been suggested as a precursor for the neurotransmitter gamma-aminobutyric acid (GABA), acting as a GABA reservoir, and may mediate anti-seizure effects of GABAergic therapies. It has also been reported that glucose metabolism could be influenced by L-carnosine. PepD also includes a lid domain that forms a homodimer; however, the physiological function of this extra domain remains unclear.	0
NZ_CP024591.1\|WP_005873441.1\|2032293_2033355_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.72515e-67
NZ_CP024591.1\|WP_099777858.1\|2020823_2022767_-\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NZ_CP024591.1\|WP_130267264.1\|2036923_2037136_+\|DUF1661-domain-containing-protein	gnl\|CDD\|285160	pfam07877, DUF1661, Protein of unknown function (DUF1661). This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.	0.000575195
NZ_CP024591.1\|WP_143733533.1\|2023787_2023952_-\|DUF1661-domain-containing-protein	gnl\|CDD\|285160	pfam07877, DUF1661, Protein of unknown function (DUF1661). This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.	0.000192763
NZ_CP024591.1\|WP_099778041.1\|2030870_2032259_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.74128e-45
NZ_CP024591.1\|WP_054190956.1\|2014393_2016277_+\|amidophosphoribosyltransferase	gnl\|CDD\|223112	COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism].	4.5655e-43
NZ_CP024591.1\|WP_099777859.1\|2024926_2027410_+\|TonB-dependent-receptor	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	7.62909e-16
NZ_CP024591.1\|WP_097561152.1\|2017402_2020630_+\|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit	gnl\|CDD\|273581	TIGR01369, Carbamoyl-phosphate_synthase_large_chain, carbamoyl-phosphate synthase, large subunit. Carbamoyl-phosphate synthase (CPSase) catalyzes the first committed step in pyrimidine, arginine, and urea biosynthesis. In general, it is a glutamine-dependent enzyme, EC 6.3.5.5, termed CPSase II in eukaryotes. An exception is the mammalian mitochondrial urea-cycle form, CPSase I, in which the glutamine amidotransferase domain active site Cys on the small subunit has been lost, and the enzyme is ammonia-dependent. In both CPSase I and the closely related, glutamine-dependent CPSase III (allosterically activated by acetyl-glutamate) demonstrated in some other vertebrates, the small and large chain regions are fused in a single polypeptide chain. This model represents the large chain of glutamine-hydrolysing carbamoyl-phosphate synthases, or the corresponding regions of larger, multifunctional proteins, as found in all domains of life, and CPSase I forms are considered exceptions within the family. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	0
NZ_CP024591.1\|WP_099777860.1\|2033351_2036501_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP024591.1\|WP_004585075.1\|2027590_2028211_-\|OmpH-family-outer-membrane-protein	gnl\|CDD\|214922	smart00935, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	6.42549e-18
NZ_CP024591.1\|WP_005875090.1\|2016310_2017384_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0

>NZ_CP024591.1|WP_012458267.1|2028538_2029999_+|aminoacyl-histidine-dipeptidase
MNITDLKPTKVWKFFHEITQVPRPSKKEEKILAYLVKFAEDRNLKYRTDEVGNLVIEKPATPGYEHLETVILQSHMDMVCEKNADKVHDFENDPIRTIIDGEWLHADGTTLGADNGIGCAAELAILDSDDIEHGPIECLFTMDEETGMTGAMNLKPGFFNGKILLNLDSEDEGELFIGCAGGMGTMAEFAYEKREATDDYLYFEVKVSGLKGGHSGGEIHIGLGNANKILTRYLYALEHELDWKLCSFQGGNLHNAIPREAHAVIGLKADQKERARVILNELAAAVEDELKRVDPGVKLEMKSVGKPAYRIDCDTKRRLVRALYACPHGVYGMSHDIEGLVETSSNLASVKMKEDDKIYVETSQRSSTSSLISDIANTVASVFELAGAKISFRDPYPGWKPNPDSPILKAASESYERIFGRKPAIKAIHAGLECGLFLDKYPYLDMVSFGPTLRDVHSPVEKIEIKTVQLWWDHLVDMLKHIPAAK
>NZ_CP024591.1|WP_004585076.1|2028242_2028458_-|hypothetical-protein
MTTIFLASLLLVGLAFVLLGIRVFFCRGGKFPQTHVGSNKAMQDRGIGCHTAQHFEAQHHRNLEDRIKELE
>NZ_CP024591.1|WP_004585075.1|2027590_2028211_-|OmpH-family-outer-membrane-protein
MKQIHYVIEAVLAVAIIILFIMMPRSSASKAKTTNHKAEQAAATLPIAFVRMDSLASQYEYFRDMNKQLAAEAEQNQRTLATKMAAMQKAAEDFQRRLRTNAFTSEDAARVEQEKILKMQEEGQRLELSMTQALANKQAEANEKMYRIVREQVSEMNKDGKYRYILTNVGLENLLYADSTLDITDDVVKFLNDHYRKEIKGKTTAE
>NZ_CP024591.1|WP_099777859.1|2024926_2027410_+|TonB-dependent-receptor
MKEAIPRKNKHIKLNGIYRLSFILLCCLLCSQAAMAQSVRVSGYVLDRGEKPIPFAGVKVRGTGTGATTNLKGYYEFRMKATTDSITIEFSSMGYQGVSRSFPSLTKDTRLNVRLAEAEMELSSVTVQATKRRLNTMERVNTRDIRVNAGPTGGVESLISTYAGVTQNNELSSQYSVRGGSYDENMVYVNGVEVYRPLLVRSAQQEGLSFVNPDLTQSVQFSAGGFTADYGDKMSSVLDIRYKQPQEKEGAVLLGMLQSSAYYGSSAGAFSQITGVRYKSAKSLLGTTDTKAEYDPIYADGQTFMTYRFSPKLSVSFLGNISQTCYKFVPQTRETSFGTLSDAKKLKIFFDGQEQDRFLTYFGAFSMNFVPDDKQRHTVTLSAFNSNERETYDIQGEYFLNDVQLGADGIASMASGSENSNGLGIGRNHEHARNRLSYRVLNIGYRGEIKLNEKHRLQAGVSAQMEKIADHISEWERRDSVGYNLPHSETVLLMYNNLYADTQMKGTRLSAFVQDRFNFSMGGGTFSLIPGIRASWWSFNKELLVSPRISMGYSPESNPALVLRAAAGLYYQAPFYKELRQTHKDAEGNNVVVLNEKIRSQGAFHILAGADYTFEMGGRKYKFTAEAYYKSLFNINPYIIENVKIRYLGENIGSGYAAGIDLKLFGELVPGVDSWLTASIIKARQKLDGYGSLPLMNAPTYNFSFFLQEYVPGNKRITATLRAALSGGLPQLNPSKGLSSPAFTAPAYKRVDLGVMYKWLDPDDSFAGRSKWLMGVKGAYIGADLFNLFDMTNVNSYYWVSDAYQQQYAVPNYLTRRQFNLRLLVEF
>NZ_CP024591.1|WP_143733533.1|2023787_2023952_-|DUF1661-domain-containing-protein
MVREVKNSRAKTRKNSFDFFQFYEPQSERLRCVNFQPMVCIDRTKSESFAHLSA
>NZ_CP024591.1|WP_004585071.1|2022876_2023725_-|VanW-family-protein
MIRIIQPIIRSERRRKLGREYFILHRKLSDCFSSIKWALPAKGDNSHGCSYPVMEHRSLIMRRLKDVDMYLQENKRTNLRLAISKLHGMIIRPGETFSVWRHVGRPTARKGYLEGLVLSQGKIGKGVGGGLCQLGNLFFWMFAHTPLSIIERHRHSFDVFPDINRSIPFGAGATLSYNYIDLRVRNNTPHTYRLELWLDDTHLNGRISSDTEQTDRYRIEETDHRIEHQSWGGYTRHNKLVRIVTRADGSEYTEPFVENHAIMMYNPLLSPPQNGASTSFQR
>NZ_CP024591.1|WP_099777858.1|2020823_2022767_-|NAD(+)-synthase
MRYGFMKVAAAVPFVKVADCEYNIERIDRMVHEADTKGVEIMTFPELSITGYSCGDLFFQPFLQERANEALCRLVEQTANTTVMVIVGMPLRVEEKLFNSAVVFQQGKILGAIPKTYLPNYREFQEARWFSPAHTLQYSTISIGQHSVPIGRNLIFKCGTVGVGIEICEDMWTPFTPGTRLCLYGAEVIFNLSSSNENAGKHSYLRSLISGLSSQGICAYVYASSGYGESSTDIVFTGKAFIAEAGEIVEEMERFRYEERMIISDIDVSRIQTERLINSSFKAAVTFHTHDEKFNQLPFKLRSRQESLPMTRRVDRNPFMPEDKDRKERSREMINIQVCGLMQRLLHMGAEHAVIGISGGLDSALALIVCAQAFDRLDLPRKNIIAVTMPGFGTSDRTYRNAFALMEAIGVTIKEIDIKEACLRHFEAIGHNPEVQDTTFENTQARERTQILMNLANIYNAPVIGTGDLSELALGWVTYNGDHMSMYAVNAGIAKTTVQILVDHIAHSGWLDEAASAVLLDIVRTPISPELKPVGQDGNISQKTEDLVGPYELHDFFIYHFLHNEYKPSKIYYLAGVAFKEIYTKAEIKKWMMVFFRRFFAQQYKRNCMPDGPKVSCISLSPRGAWRMASDASSALWLDEIAKFETD
>NZ_CP024591.1|WP_097561152.1|2017402_2020630_+|carbamoyl-phosphate-synthase-(glutamine-hydrolyzing)-large-subunit
MIDKSKIKKVLLLGSGALKIGEAGEFDYSGSQALKAIREEGIRTVLVNPNIATVQTSEGIADEIYFLPVTPYFVEKVIEKERPDGILLAFGGQTALNCGVELYRSGVLEKYGVEVLGTPVQAIMDTEDRELFVRKLDEINVKTIQSQAVESVEEARKAARELGYPVIIRAAYALGGLGSGFCDDEDELNILCEKAFSFSPQVLVEKSLKGWKEVEYEVVRDRFDNCITVCNMENFDPLGIHTGESIVIAPSQTLTNSEYHKLRELAIRIIRHIGIVGECNVQYALDPDSEDYRVIEVNARLSRSSALASKATGYPLAFVAAKLGLGYGLFDLKNSVTQTTSAFFEPALDYVVCKIPRWDLGKFHGVSRQLGSSMKSVGEVMAIGRTFEEAIQKGLRMIGQGMHGFVENKELVIPNIDKALNEPTDRRIFVISKAFRQGYTVDKIHELTKIDRWFLEKLYGIVTLAEEMEEFDKLEDLSPALLAEAKLRGFSDFQVARAVLKPDATSMESATNQVRAMRKELGILPVVKRIDTLAAEYPAHTNYLYLTYSGDRHDVVYENDKRSVVVLGSGAYRIGSSVEFDWCGVNALATIRKEGYRSVMINYNPETVSTDYDISDRLYFDELTFERVMDILELENPHGVIVSTGGQIPNNLAVRLDEQHVPILGTSAQSIDNAEDRHKFSAMLDKLGIDQPRWQELSSMDDIDGFVAEVGYPVLVRPSYVLSGAAMNVCSNDEELHRFLELAANVSKQHPVVVSQFIEHAKEVEMDAVARDGEIIAYAISEHIEFAGVHSGDATIQFPAQKLYVETVRRIKRISREIAKALKISGPFNIQFLAKGNDIKVIECNLRASRSFPFVSKVLKINFIELATRIMLGLPVEKPNKSEFDLDYVGIKASQFSFTRLQKADPVLGVDMTSTGEVGCIADDTDEAVLKSMLSVGYRIPQKSVLLSTGGYKQKVDMLDATTMLAAKGYKIYATEGTHNFLRENGIESTKVFWPSENGQPQALELLHNREIELVVNINKNLTAGELTNGYKLRRAAIDLNIPLVTNARLASAFITAFCKHSPEDIRIKSWAEYK
>NZ_CP024591.1|WP_005875090.1|2016310_2017384_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MREQRKATLILDDGSRFEGYSFGCERAVAGEVVFNTAMTGYVESLTDPSYRGQIMVMTYPLVGNYGVPMKAAEPNGVSCFMESDRIHMEGIVVSDYSHSYSHWNAVESLGDWLKREQVFGLTGIDTRALAKHLREHGSMKGKIILEGGEDIGFADPYTVNQVAEASCREVIVYGTGSKKVVLVDCGVKDNIIRSLLREDITLYRVPWDYDFHRIAYDGLFISNGPGDPNMCSVTVEHIRRAVAGDKPICGICMGNQLLAKAAGASIFKLKYGHRSHNQPVREVGTNKCYITSQNHGFAVDPASLGSDWEELYINLNDGTNEGIRHKSKPFFSAQFHPEACGGPVDTMFIFDEFLKNL
>NZ_CP024591.1|WP_054190956.1|2014393_2016277_+|amidophosphoribosyltransferase
MEPLKHECGIAMVRLRKPLSYYHDKYGTWMYGLNKLYLLMEKQHNRGQEGAGLAVVKLNSRPGEEYLFRERALGANAISEIFDSVHKDFQAYSREELGDAEFAASQIPYAGECYMGHLRYSTTGKSGLTFVHPMIRRSNWRAKCLSICGNFNLTNVDGIFDEITSVGQHPRNMSDTHILLEQIGHRLDREVERLFRIGKEQNLKGMDITHFIEERIDLSNVLKKCSPFWDGGYVMCGLTGSGESYAVRDPWGIRPAFYYIDDEIVVTASERPVIQTVMNLSAEAVRELMPGEAIFVNSKGEPRIERILETKNYQACSFERIYFSRGSDQDIYRERKALGYLLSERILRAIDYDISYTVFSFIPNTAEVAYYGMLEGIDHYLDECKIREIRENPNMSEAKLREILGRKVRSEKVAIKDIKLRTFITEGNSRNDLAAHVYDITYGTVRAGVDNLVVIDDSIVRGTTLRQSIIGIMDRLQPKKIVIVSSSPQIRYPDYYGIDMRKMREFVAFRSAVALLQERGMEQVLHDAYAKALELRKLSSGQEVENVVKTIYKPFTAEEISAKMVELLKPEGVRAKVEIVYQSLEGLHQAIPNHPGDWYFSGDYPTPGGAHLVNEAFISYMEEDYGK
>NZ_CP024591.1|WP_099778041.1|2030870_2032259_+|TolC-family-protein
MNRFSNHWPCILVGLVLWFVSASRTVAQNASETTVSYDTDTAVLSEADVLRIALSENATVKVADMDVRKQEYARRAARADLFPKVDLNGVYSHTLKKQVLYIDMPGFSSSEGIEMGRTHNTQGGVNVSMPLVSAQLWKSIAMTGEQLDLALEKARSSRIDLVAEVKKAYLSVLLAEDSYGVFKRSYDNALANYKNISDKFDRGLVAEYDKIRANVQVRNIEPNLLQAQNSVALALWQLKVLMSMEVETPIRLSGSLSDYKEQVYTGYFAADTLISNNSSLRQLDIQRRLAVSADKLNKYSFLPTLNLGGQYTYSLNSNDFKFWGEGQRWTPFSTISLSLNIPIFNGGKRLYNVKQSALSIRQIDLQRRHIEQSIRMGIKNQNDRLRTCMQRFVASEEAVRSAEKGYQIAEKRYQTGEGTLVELNDADVALLQARLNYNQAIFDFMTAKAELDKMNGMGIPEQ
>NZ_CP024591.1|WP_005873441.1|2032293_2033355_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MINMKRSNTLGSAILLIVLPFLILTSCNGKKESRPSAADSAAMAAKLVETTIVKTDTLNEVLSFTATVRAEVTNNITPQMGNRIVRLTAEVGDRVGRGQVLAELDRSQLTQAKVQLENTRTNFQRMDELYKIGGIAKQQWDALKTQLDVAETTYNNLLENTVLRSPISGVITARNYDSGDMASPTKPIYVVEQIAPVKLRIDVSEQYFSRLKKGMPATITVDALQGQTFEGKISLVYPAVDASTHTIGVEIQIANRDQLLRPGMYARVNLDFGHKSAVMVEDLAVVKQVGSGEFFVFVVENGKAVRRMVKVGARQNDSYEIIEGLNVGETVVTAGMNNLMDGQSVRIKEQSKL
>NZ_CP024591.1|WP_099777860.1|2033351_2036501_+|efflux-RND-transporter-permease-subunit
MSIYESAVKKPVTTILIFVAIAIFGLFSLSRLSIDLYPKIETSNIMVVTSYAGASASDIENNVTKVLENTLNGVSNLKHITSKSRENASVITLQFNEGVDIEVATNDVRDKLDAVSNFLPDDVNKPMIFKFGTDDIPITMLSVQAKESTMALSKILEDKVTNALARLDGVGAVSIMGTVKREIQVYCDPAKLEAYNLTVEAVSQIISAENKNVPAGLIDLGNKTSSIRIQGEFADARQLNQIVVASVGGRNVYLSDVARVEDTHAENEQESYNNNVRGAMIMINKQSGANSVAISRAVRDALPEIQASLPSDVKLGTIFDTSDNIVNTINSLRDTIAITFVIVILVVLFFLGRWRATFIIGLTIPISLVASFIYLMATGNTLNIISLSSLSIAIGMVVDDAIVVLENVTTHIERGSYPKQAAIHGTNEVGISVIASTLTMLAVFLPLTMIQGLTGILFRQLGWIVSIIMIISTVAALSLTPMLCSQLLQRDKKQGRLQQKLFVPIERFLDSVDRAYERFLNWTVRHRTVTIVSAFIIFAASLMMTPLLKTEFFPQSDNGYIQIQAEYPVGTGVNLPRAFALRMIDSWEKEIPEIDRTSFSVGQAEASSMFAAMQDNGTNIITFHIGLTGRNERKRSMNEVADQIRTMLDDYPEIHSYKVTPGGSGGGMGGQPTVNLDIYGYDFNKTGDLAERFSRLMKEDARCAQATISRKDYVPEYQFVFDRTKLAENGLNSTTAAMFLRNRVNGRVASTYREEGDEYDIRVRLAPEFRRSLRDMENILIYTPQGKGVRLGELGKVEELYTPPTIERKDRQRVVIVASTAVKGAALSDLVEVAKEKIAQLEIPDGIDYKISGTYEDQQKTFADLSTLMLLIVILVYIVMAAQFESLVDPFVIMFSIPFAFTGVIVGLIITNTTFSAMSFIGLIMLMGIVVKNGIVLIDYTRLCRERGMGILSAVVQAGRSRLRPVLMTTLTTILGMVPMAIGIGEGSELWQPMGVTVAWGLSVSTLITLIIVPTVYAVFASNGMKRQRRLLAKKYAKKENKSRVWNRK
>NZ_CP024591.1|WP_004585082.1|2036485_2036785_+|hypothetical-protein
MEQKMIFITYNQAYHDIIIRLLSRYNLRGYTYWETVRGCGSDTGEPHLGTHAWPTLNGALMVVCSSEKMKTIMDALRILDAATPDQGLRAFVWNIEQTI
>NZ_CP024591.1|WP_130267264.1|2036923_2037136_+|DUF1661-domain-containing-protein
MSHKTWCENFSLLVWEAKNSRATTKKFSRHFFQRYCCPVKFLQLLTIRKHLQAFIREKYHMGEFQMPYTV
>NZ_CP024591.1|WP_049782968.1|2037959_2038082_+|hypothetical-protein
MFVVSGKGSSGLSRTKKVGAASRLGDNLHTSISLQVVFSP
>NZ_CP024591.1|WP_013815838.1|2038254_2038464_+|hypothetical-protein
MKPRYKISIWVALTLAGSLLWGGSVWLWLAGLCAGKFLIRLLLTITLAIAVYILAYALIIGTILWILIS
>NZ_CP024591.1|WP_004584361.1|2038476_2038695_+|hypothetical-protein
MKRRSKTIAQQCRYYEVDNIFEYMVSVYLNGNISAFRELYKELNRKDRKEFILYLFSEVEPIHIQEIILATI
>NZ_CP024591.1|WP_004584360.1|2038706_2038988_+|hypothetical-protein
MEAFRFYQDRKVTCWERTHFEVTAENYEEAVAIVKSWQGEDVLCFEDNEKVIIMDDETLYETSESLSVKENGGKPTIEVFADNGEDIINNTTL
>NZ_CP024591.1|WP_004584359.1|2039000_2039591_+|hypothetical-protein
MRTAIRTYEVYNLHELTREAQAKAHSHWAEHFNYGWDEENRKTLQAFEQIFNIKVDRWSYDNYSYWYRFTSHYSEEEDNLKGVRLLKYLVNNHWNDLYIPKTIWGHNYKRKRKSRVFVTNDCVLTGYCMDYEILKPIYDFLKAPDDTTLYELMDRCLNGFFKACRDDMEYQLSEEAFAESCEANNYEFLSSGTLFN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024591_6	6.1\|2030233\|37\|NZ_CP024591\|CRISPRCasFinder	2030233-2030269	37	NZ_CP024591.1	2030325-2030361	2	0.946

1. spacer 6.1|2030233|37|NZ_CP024591|CRISPRCasFinder matches to position: 2030325-2030361, mismatch: 2, identity: 0.946

ggtagagggtttacagtataaagcatggaggctttat	CRISPR spacer
ggtagagggtttacggtataaagtatggaggctttat	Protospacer
**************.********.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	85038-85067	5	0.833
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MT786458	Staphylococcus phage vB_SauH_SAP1, complete genome	20525-20554	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MG557618	Staphylococcus phage HSA30, complete genome	123762-123791	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MT080601	UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome	5660-5689	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MT080585	UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome	22566-22595	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	JX080302	Staphylococcus phage 676Z, complete genome	24659-24688	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	KY779849	Staphylococcus phage qdsa002, complete genome	29022-29051	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MF001365	Staphylococcus phage SA3, partial genome	141323-141352	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MH159197	Staphylococcus phage VB_SavM_JYL01, complete genome	139892-139921	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MN304941	Staphylococcus phage vB_SauH_IME522, complete genome	13750-13779	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MK250904	Staphylococcus phage VB-SavM-JYL02, complete genome	138464-138493	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MT080591	UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome	19102-19131	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NC_025416	Staphylococcus phage MCE-2014, complete genome	25935-25964	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	KM216423	Staphylococcus phage P108, complete genome	104515-104544	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NC_028765	Staphylococcus phage phiIPLA-RODI, complete genome	18041-18070	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MT080589	UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome	17770-17799	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NC_019448	Staphylococcus phage GH15, complete genome	24896-24925	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MN693686	Marine virus AFVG_250M1168, complete genome	2888-2917	6	0.8
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	MN694344	Marine virus AFVG_250M1167, complete genome	41562-41591	6	0.8
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	79431-79460	6	0.8
NZ_CP024591_5	5.2\|1826817\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826817-1826846	30	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	611979-612008	6	0.8
NZ_CP024591_1	1.4\|209341\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209341-209370	30	MN693020	Marine virus AFVG_117M64, complete genome	42513-42542	7	0.767
NZ_CP024591_1	1.4\|209341\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209341-209370	30	MN693542	Marine virus AFVG_25M165, complete genome	17601-17630	7	0.767
NZ_CP024591_1	1.4\|209341\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209341-209370	30	MN693056	Marine virus AFVG_25M10, complete genome	17255-17284	7	0.767
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	429921-429950	7	0.767
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	NC_010181	Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence	18050-18079	7	0.767
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	50548-50577	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	MK448555	Streptococcus satellite phage Javan592, complete genome	533-562	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	MK448547	Streptococcus satellite phage Javan572, complete genome	533-562	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	MK448389	Streptococcus satellite phage Javan260, complete genome	533-562	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	MK448535	Streptococcus satellite phage Javan550, complete genome	533-562	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	NZ_CP033939	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence	31500-31529	8	0.733
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	91800-91829	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	AP014086	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C3-MedDCM-OCT-S45-C97, * SEQUENCING IN PROGRESS *	15504-15533	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_KP119165	Escherichia coli strain QT598 plasmid pEC598, complete sequence	13452-13481	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP038794	Escherichia coli strain PF9285 plasmid pDW54_3, complete sequence	2549-2578	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_LN824137	Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_D_Kpneumoniae_MS6671	3728-3757	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NC_010904	Escherichia coli plasmid pColG, complete sequence	1518-1547	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP022454	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-4, complete sequence	4777-4806	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP022454	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-4, complete sequence	13598-13627	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP051718	Escherichia coli strain SCU-118 plasmid pSCU-118-2, complete sequence	2223-2252	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP024434	Klebsiella pneumoniae strain DA48896 plasmid p48896_5, complete sequence	3728-3757	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP050369	Klebsiella pneumoniae strain 47733 plasmid p47733S, complete sequence	78-107	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP050738	Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-4, complete sequence	2918-2947	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NZ_CP050743	Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-4, complete sequence	1378-1407	8	0.733
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	NZ_CP007544	Synechocystis sp. PCC 6714 plasmid pSYLB, complete sequence	57828-57857	8	0.733
NZ_CP024591_5	5.1\|1826751\|30\|NZ_CP024591\|PILER-CR,CRISPRCasFinder,CRT	1826751-1826780	30	MN693940	Marine virus AFVG_250M588, complete genome	10411-10440	8	0.733
NZ_CP024591_1	1.5\|209407\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209407-209436	30	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	103647-103676	9	0.7
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	70858-70887	10	0.667
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	53815-53844	10	0.667
NZ_CP024591_1	1.3\|209275\|30\|NZ_CP024591\|CRISPRCasFinder,CRT,PILER-CR	209275-209304	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	39418-39447	10	0.667
NZ_CP024591_4	4.1\|1586537\|34\|NZ_CP024591\|CRISPRCasFinder	1586537-1586570	34	NZ_CP017451	Klebsiella sp. LTGPAF-6F plasmid unnamed1, complete sequence	163849-163882	10	0.706
NZ_CP024591_4	4.1\|1586537\|34\|NZ_CP024591\|CRISPRCasFinder	1586537-1586570	34	NZ_CP020902	Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence	157397-157430	10	0.706
NZ_CP024591_4	4.1\|1586537\|34\|NZ_CP024591\|CRISPRCasFinder	1586537-1586570	34	NZ_CP021881	Escherichia coli strain AR_0137 plasmid tig00001145_pilon, complete sequence	26629-26662	10	0.706

1. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

ttttcactttttcttctattccatccatct	CRISPR spacer
tgtatactttttcctctattccatacatct	Protospacer
* * .********.********** *****

2. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MT786458 (Staphylococcus phage vB_SauH_SAP1, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

3. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MG557618 (Staphylococcus phage HSA30, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

4. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MT080601 (UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

5. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MT080585 (UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

6. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to JX080302 (Staphylococcus phage 676Z, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

7. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to KY779849 (Staphylococcus phage qdsa002, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

8. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MF001365 (Staphylococcus phage SA3, partial genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

9. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MH159197 (Staphylococcus phage VB_SavM_JYL01, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

10. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN304941 (Staphylococcus phage vB_SauH_IME522, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

11. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MK250904 (Staphylococcus phage VB-SavM-JYL02, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

12. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MT080591 (UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

13. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_025416 (Staphylococcus phage MCE-2014, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

14. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to KM216423 (Staphylococcus phage P108, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

15. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_028765 (Staphylococcus phage phiIPLA-RODI, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

16. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MT080589 (UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

17. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_019448 (Staphylococcus phage GH15, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgatttacaataggtttaacttttaaagca	Protospacer
*************.******* *** *  .

18. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN693686 (Marine virus AFVG_250M1168, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgattaacaatagatttaacttttggattc	Protospacer
***** *************** **. **

19. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN694344 (Marine virus AFVG_250M1167, complete genome) position: , mismatch: 6, identity: 0.8

tgatttacaatagatttaactattatatgg	CRISPR spacer
tgattaacaatagatttaacttttggattc	Protospacer
***** *************** **. **

20. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 6, identity: 0.8

ttttcactttttcttctattccatccatct	CRISPR spacer
ttttcaatttttcttctattccgtcatttg	Protospacer
****** ***************.**  *.

21. spacer 5.2|1826817|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cagaggtcttggtcaatgatttcctttact	CRISPR spacer
ccgaggtcttggtcaatgaggtccttgatg	Protospacer
* *****************  ***** *.

22. spacer 1.4|209341|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN693020 (Marine virus AFVG_117M64, complete genome) position: , mismatch: 7, identity: 0.767

ggaaaggtacttacactacctcgggaacaa	CRISPR spacer
gttaaatggctaacactacctcgggaacaa	Protospacer
*  **.  .** ******************

23. spacer 1.4|209341|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN693542 (Marine virus AFVG_25M165, complete genome) position: , mismatch: 7, identity: 0.767

ggaaaggtacttacactacctcgggaacaa	CRISPR spacer
gttaaatggctaacactacctcgggaacaa	Protospacer
*  **.  .** ******************

24. spacer 1.4|209341|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MN693056 (Marine virus AFVG_25M10, complete genome) position: , mismatch: 7, identity: 0.767

ggaaaggtacttacactacctcgggaacaa	CRISPR spacer
gttaaatggctaacactacctcgggaacaa	Protospacer
*  **.  .** ******************

25. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 7, identity: 0.767

ttttcactttttcttctattccatccatct	CRISPR spacer
tttttactttttcttctattcattgaaatt	Protospacer
****.****************  *  * .*

26. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NC_010181 (Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence) position: , mismatch: 7, identity: 0.767

ttttcactttttcttctattccatccatct	CRISPR spacer
ctttcactttttcttctcatccatatcttt	Protospacer
.****************  ***** . *.*

27. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
gggagtctttaatcaaagaaataacaagaa	Protospacer
.  *.  .*****************.****

28. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MK448555 (Streptococcus satellite phage Javan592, complete genome) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tataagacataatcaaagaaataactgaat	Protospacer
  .***** **************** ..*

29. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MK448547 (Streptococcus satellite phage Javan572, complete genome) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tataagacataatcaaagaaataactgaat	Protospacer
  .***** **************** ..*

30. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MK448389 (Streptococcus satellite phage Javan260, complete genome) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tataagacataatcaaagaaataactgaat	Protospacer
  .***** **************** ..*

31. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to MK448535 (Streptococcus satellite phage Javan550, complete genome) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tataagacataatcaaagaaataactgaat	Protospacer
  .***** **************** ..*

32. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033939 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-2, complete sequence) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
ggcatgacttaatcaaagaaatcactcaat	Protospacer
. ** ***************** **  .*

33. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tgcaagacttaatccaagaaaaaacagcag	Protospacer
  ************ ****** ***.. *.

34. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to AP014086 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C3-MedDCM-OCT-S45-C97, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
agatttaaaatagatttaactataactaaa	Protospacer
 ****** *************** *.  ..

35. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP119165 (Escherichia coli strain QT598 plasmid pEC598, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
aagatatcaatagatttaaatattatattg	Protospacer
 .. *  ************ ******** *

36. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038794 (Escherichia coli strain PF9285 plasmid pDW54_3, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

37. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN824137 (Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_D_Kpneumoniae_MS6671) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

38. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_010904 (Escherichia coli plasmid pColG, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

39. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022454 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-4, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

40. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022454 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-4, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

41. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051718 (Escherichia coli strain SCU-118 plasmid pSCU-118-2, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

42. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024434 (Klebsiella pneumoniae strain DA48896 plasmid p48896_5, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

43. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050369 (Klebsiella pneumoniae strain 47733 plasmid p47733S, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

44. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050738 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-4, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

45. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050743 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-4, complete sequence) position: , mismatch: 8, identity: 0.733

tgatttacaatagatttaactattatatgg	CRISPR spacer
tctatagaaatagatttaagtattatatgt	Protospacer
*   * . *********** *********

46. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007544 (Synechocystis sp. PCC 6714 plasmid pSYLB, complete sequence) position: , mismatch: 8, identity: 0.733

ttttcactttttcttctattccatccatct	CRISPR spacer
tcgccactttttcttctattccttctgcca	Protospacer
*. .****************** **...*

47. spacer 5.1|1826751|30|NZ_CP024591|PILER-CR,CRISPRCasFinder,CRT matches to MN693940 (Marine virus AFVG_250M588, complete genome) position: , mismatch: 8, identity: 0.733

ttttcactttttcttctattccatccatct	CRISPR spacer
gtacagatttttcttctatttcatctatct	Protospacer
 * . . *************.****.****

48. spacer 1.5|209407|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 9, identity: 0.7

tgatttacaatagatttaactattatatgg	CRISPR spacer
acatttccaatagatttaacttttaggata	Protospacer
  **** ************** *** .  .

49. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tgaaagacttaatcaaagaattaaacttgg	Protospacer
   ***************** ***    ..

50. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tgaaagacttaatcaaagaattaaacttgg	Protospacer
   ***************** ***    ..

51. spacer 1.3|209275|30|NZ_CP024591|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

accaagacttaatcaaagaaataacgagaa	CRISPR spacer
tgaaagacttaatcaaagaattaaacttgg	Protospacer
   ***************** ***    ..

52. spacer 4.1|1586537|34|NZ_CP024591|CRISPRCasFinder matches to NZ_CP017451 (Klebsiella sp. LTGPAF-6F plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

caatgccagttttattagacgtattcattgattt	CRISPR spacer
ttagctagggtttattagatgtattcattaattt	Protospacer
. *  . .* *********.*********.****

53. spacer 4.1|1586537|34|NZ_CP024591|CRISPRCasFinder matches to NZ_CP020902 (Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence) position: , mismatch: 10, identity: 0.706

caatgccagttttattagacgtattcattgattt	CRISPR spacer
ttagctagggtttattagatgtattcattaattt	Protospacer
. *  . .* *********.*********.****

54. spacer 4.1|1586537|34|NZ_CP024591|CRISPRCasFinder matches to NZ_CP021881 (Escherichia coli strain AR_0137 plasmid tig00001145_pilon, complete sequence) position: , mismatch: 10, identity: 0.706

caatgccagttttattagacgtattcattgattt	CRISPR spacer
ttagctagggtttattagatgtattcattaattt	Protospacer
. *  . .* *********.*********.****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 18951

Clostridium_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023847415.1\|549_1056_-	histidinol-phosphate aminotransferase	NA	NA	NA	NA
WP_013816326.1\|1080_1296_-	hypothetical protein	NA	NA	NA	NA
WP_004585684.1\|1592_2159_-	elongation factor P	NA	NA	NA	NA
WP_013816700.1\|2608_3838_+	ornithine--oxo-acid transaminase	NA	NA	NA	NA
WP_021662400.1\|3844_4774_+	amidinotransferase	NA	NA	NA	NA
WP_077082952.1\|4850_6482_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_023847614.1\|16030_18427_+	anaerobic ribonucleoside triphosphate reductase	A0A0A8WEK0	Clostridium_phage	7.0e-183	43.8
WP_004584586.1\|18459_18951_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A1W5P0X3	Cronobacter_phage	1.9e-26	42.7

DBSCAN-SWA_2

22318 : 24328

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777193.1\|22318_24328_+	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	1.9e-104	35.6

DBSCAN-SWA_3

30959 : 41650

Tupanvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021664986.1\|30959_33590_-\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	1.6e-95	42.2
WP_099777195.1\|33961_34675_+	hypothetical protein	NA	NA	NA	NA
WP_099777197.1\|36199_37786_-	replicative DNA helicase	A0A0F7L6J1	uncultured_marine_virus	3.2e-91	43.7
WP_013815980.1\|37820_39608_-	elongation factor 4	A0A2K9L6L3	Tupanvirus	3.1e-26	45.5
WP_004584509.1\|40184_40820_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004584508.1\|40903_41650_+	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.2e-17	31.2

DBSCAN-SWA_4

49772 : 53844

Ralstonia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777200.1\|49772_50858_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.2e-19	27.1
WP_077492371.1\|51260_51965_-	peptidylprolyl isomerase	A0A076FI46	Aureococcus_anophage	7.1e-11	27.7
WP_099777202.1\|51972_53844_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.8e-54	30.9

DBSCAN-SWA_5

64400 : 71809

Acinetobacter_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777206.1\|64400_66188_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	5.6e-129	40.6
WP_099777207.1\|66236_67784_-	DUF4301 family protein	NA	NA	NA	NA
WP_099777208.1\|68094_69466_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-09	24.8
WP_004583505.1\|69886_71809_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.9e-140	48.8

DBSCAN-SWA_6

79185 : 81673

Emiliania_huxleyi_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777213.1\|79185_80334_-	8-amino-7-oxononanoate synthase	V5LQ39	Emiliania_huxleyi_virus	3.7e-33	29.0
WP_099777214.1\|80719_81673_-	D-2-hydroxyacid dehydrogenase	M1NSB9	Streptococcus_phage	7.1e-22	28.5

DBSCAN-SWA_7

86954 : 88472

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043876435.1\|86954_88472_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.2e-63	36.8

DBSCAN-SWA_8

94853 : 98361

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777219.1\|94853_96608_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-30	26.0
WP_099777220.1\|96654_98361_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-46	30.2

DBSCAN-SWA_9

129632 : 134286

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777230.1\|129632_130676_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	G3MA01	Bacillus_virus	1.7e-16	25.7
WP_053444140.1\|130766_131363_+	DUF4827 domain-containing protein	NA	NA	NA	NA
WP_099777231.1\|131416_132805_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	3.6e-14	23.1
WP_004584431.1\|132849_134286_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.0e-64	34.3

DBSCAN-SWA_10

146259 : 147564

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777947.1\|146259_147564_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.2e-82	40.4

DBSCAN-SWA_11

153176 : 171979

Enterococcus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458103.1\|153176_154067_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.3e-29	33.0
WP_054191144.1\|154360_155707_+	MATE family efflux transporter	NA	NA	NA	NA
WP_004584414.1\|156486_159078_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	6.7e-115	34.3
WP_004584413.1\|159297_159858_+	flavin reductase	NA	NA	NA	NA
WP_004584409.1\|160124_161534_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	2.6e-89	39.3
WP_099777239.1\|161565_162885_-	pseudouridine synthase	NA	NA	NA	NA
WP_099777240.1\|162985_164329_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.6e-144	57.1
WP_004584406.1\|164463_165027_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_005873656.1\|165049_165700_-	hypothetical protein	NA	NA	NA	NA
WP_021678584.1\|165724_166912_-	hypothetical protein	Q9KX94	Enterobacteria_phage	6.3e-60	38.0
WP_004584403.1\|167251_167719_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077070727.1\|167765_169148_+	exodeoxyribonuclease VII large subunit	M1NLU2	Moumouvirus	9.4e-15	32.2
WP_013815882.1\|169426_171979_+	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	A0A0A0UZT5	uncultured_virus	2.8e-89	40.2

DBSCAN-SWA_12

175458 : 179838

Catovirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088492671.1\|175458_178089_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.2e-154	38.9
WP_157766516.1\|178140_178263_-	lipoprotein	NA	NA	NA	NA
WP_157766517.1\|178339_178570_+	hypothetical protein	NA	NA	NA	NA
WP_004584394.1\|178896_179838_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-67	48.4

DBSCAN-SWA_13

185523 : 186648

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777949.1\|185523_186648_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2P1ELT3	Moumouvirus	4.6e-36	34.5

DBSCAN-SWA_14

191372 : 192707

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777246.1\|191372_192707_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	3.3e-81	40.6

DBSCAN-SWA_15

221434 : 222467

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777258.1\|221434_222028_-	radical SAM protein	A0A2H4GY30	Pseudomonas_phage	9.3e-20	32.4
WP_005873459.1\|222047_222467_-	6-carboxytetrahydropterin synthase	A0A0S0MVM4	Pseudomonas_phage	2.4e-46	62.7

DBSCAN-SWA_16

229152 : 230343

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458167.1\|229152_230343_-	N-acetylmuramoyl-L-alanine amidase	U5PTK7	Bacillus_virus	6.2e-23	35.5

DBSCAN-SWA_17

240416 : 251408

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777266.1\|240416_242714_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	4.4e-118	38.5
WP_054190941.1\|242713_244093_-	SWIM zinc finger family protein	NA	NA	NA	NA
WP_099777267.1\|244118_247022_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	9.8e-248	47.6
WP_099777268.1\|247092_248466_-	gliding motility-associated C-terminal domain-containing protein	NA	NA	NA	NA
WP_099777269.1\|248560_249295_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.0e-28	35.4
WP_004584269.1\|249313_250060_-	ABC transporter permease	NA	NA	NA	NA
WP_099777270.1\|250436_251408_+	hypothetical protein	A0A0F7L6E4	uncultured_marine_virus	1.6e-08	59.6

DBSCAN-SWA_18

259533 : 260667

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777277.1\|259533_260667_+	ABC transporter ATP-binding protein	A4JWM1	Burkholderia_virus	5.0e-107	53.7

DBSCAN-SWA_19

269312 : 270401

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777954.1\|269312_270401_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	6.9e-21	28.1

DBSCAN-SWA_20

278677 : 281404

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023846895.1\|278677_281404_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.1e-86	36.0

DBSCAN-SWA_21

289146 : 289974

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013815760.1\|289146_289974_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-13	27.3

DBSCAN-SWA_22

304486 : 309302

Tupanvirus(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584228.1\|304486_306448_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	8.4e-126	37.6
WP_099777293.1\|306551_307157_+	translation initiation factor IF-3	A0A1C3S7H2	Escherichia_phage	2.3e-10	34.8
WP_004584226.1\|307233_307431_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004584225.1\|307543_307891_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_099777295.1\|308216_309302_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.9e-19	27.8

DBSCAN-SWA_23

320159 : 322143

Mollivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777299.1\|320159_321101_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.2e-26	28.2
WP_005875412.1\|321150_322143_-	PhoH family protein	W8D063	Erwinia_phage	5.5e-49	50.0

DBSCAN-SWA_24

330801 : 332283

Tupanvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584188.1\|330801_332283_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	3.7e-94	37.3

DBSCAN-SWA_25

341401 : 361244

Tunisvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012457944.1\|341401_341836_-	dUTP diphosphatase	V9SFR6	Tunisvirus	2.3e-44	61.3
WP_004584178.1\|341892_343638_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
WP_004584177.1\|343811_344318_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.1e-25	44.9
WP_004584176.1\|344318_344699_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_099777307.1\|344866_345874_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_077082663.1\|345892_346669_-	AMP nucleosidase	NA	NA	NA	NA
WP_004584173.1\|346737_347211_+	type I restriction enzyme HsdR N-terminal domain-containing protein	NA	NA	NA	NA
WP_004584172.1\|347213_348191_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-22	29.8
WP_012457949.1\|348177_349506_+	ABC transporter permease	NA	NA	NA	NA
WP_099777309.1\|349951_352708_+	calcium-translocating P-type ATPase, PMCA-type	M1I547	Acanthocystis_turfacea_Chlorella_virus	2.2e-100	31.3
WP_021664086.1\|352707_353430_+	DUF5020 family protein	NA	NA	NA	NA
WP_005875205.1\|353450_354752_+	NCS2 family permease	NA	NA	NA	NA
WP_099777310.1\|354780_355605_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_099777311.1\|355583_357488_+	YgiQ family radical SAM protein	M1QSD9	Pseudomonas_phage	2.7e-44	39.0
WP_021665074.1\|357695_359855_-	elongation factor G	NA	NA	NA	NA
WP_099777312.1\|360098_361244_-	DNA polymerase III subunit delta'	A0A2H4IBD4	Erwinia_phage	1.1e-08	25.1

DBSCAN-SWA_26

365619 : 369554

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584156.1\|365619_366234_+	thymidine kinase	G3MBK1	Bacillus_virus	2.6e-33	44.8
WP_021661699.1\|366230_367046_+	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA
WP_099777315.1\|367084_367420_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_099777316.1\|367447_368671_+	ABC transporter permease	NA	NA	NA	NA
WP_004584152.1\|368816_369554_+	polyprenol monophosphomannose synthase	A0A0N7A8R9	Sulfolobus_monocaudavirus	8.5e-23	34.5

DBSCAN-SWA_27

386480 : 392685

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584130.1\|386480_387272_+	patatin-like phospholipase family protein	M1I2P3	Paramecium_bursaria_Chlorella_virus	1.1e-07	28.8
WP_099777324.1\|387268_388963_+	alpha-amylase	NA	NA	NA	NA
WP_099777325.1\|389478_392685_-	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	8.6e-128	31.3

DBSCAN-SWA_28

406193 : 407216

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584116.1\|406193_407216_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.7e-115	65.6

DBSCAN-SWA_29

420562 : 423056

unidentified_phage(100.0%)

integrase

attL 412464:412477|attR 424417:424430

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
412464:412477	attL	NA	NA	NA	NA
WP_088439442.1\|420562_421783_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	9.8e-24	31.1
WP_088439440.1\|421787_423056_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.6e-24	37.8
424417:424430	attR	NA	NA	NA	NA

DBSCAN-SWA_30

426485 : 444854

Bacillus_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777339.1\|426485_428699_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.3e-34	28.6
WP_004343809.1\|428771_429752_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.3e-31	34.0
WP_004342663.1\|429945_430764_+	nitroreductase	NA	NA	NA	NA
WP_004342665.1\|430868_431669_-	23S ribosomal RNA methyltransferase Erm	E4ZFQ0	Streptococcus_phage	1.1e-15	28.4
WP_099777340.1\|432344_438047_-	DUF2958 domain-containing protein	A0A248SL14	Klebsiella_phage	3.0e-91	31.0
WP_099777341.1\|438052_440146_-	type IA DNA topoisomerase	A0A076FM50	Aureococcus_anophage	1.3e-12	23.0
WP_099777342.1\|440234_441644_-	DUF3945 domain-containing protein	NA	NA	NA	NA
WP_099777343.1\|442153_443239_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	7.6e-20	28.1
WP_004585382.1\|443843_444854_+	grasp-with-spasm system ATP-grasp peptide maturase	S5VKI3	Leptospira_phage	7.3e-17	29.8

DBSCAN-SWA_31

448556 : 450770

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021665034.1\|448556_450770_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.4e-31	27.4

DBSCAN-SWA_32

458480 : 460148

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043894640.1\|458480_460148_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.1e-140	51.6

DBSCAN-SWA_33

478887 : 479349

Klebsiella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777360.1\|478887_479349_-	PH domain-containing protein	A0A2H5BNL9	Klebsiella_phage	2.0e-09	31.1

DBSCAN-SWA_34

485940 : 488523

Cellulophaga_phage(50.0%)

integrase

attL 476199:476212|attR 487496:487509

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
476199:476212	attL	NA	NA	NA	NA
WP_099777363.1\|485940_487233_+\|integrase	site-specific integrase	R9ZY34	Cellulophaga_phage	4.1e-20	24.5
WP_099777364.1\|487245_488523_+	DUF1016 family protein	Q9JMP5	Wolbachia_phage	8.5e-71	36.8
487496:487509	attR	NA	NA	NA	NA

DBSCAN-SWA_35

492331 : 492664

Wolbachia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777366.1\|492331_492664_+	DUF1016 family protein	Q9JMP5	Wolbachia_phage	1.2e-13	39.0

DBSCAN-SWA_36

516203 : 519686

Erysipelothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777378.1\|516203_517553_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-31	26.3
WP_004585338.1\|518234_519686_+	HD domain-containing protein	A0A2I2MPB1	Mycobacterium_phage	1.2e-31	28.8

DBSCAN-SWA_37

522765 : 525543

Staphylococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777380.1\|522765_525543_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.2e-207	43.5

DBSCAN-SWA_38

554020 : 567316

Caulobacter_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777398.1\|554020_558007_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.7e-45	32.0
WP_099777969.1\|558157_558631_+	SAM-dependent methyltransferase	A0A0N7IRF6	Acinetobacter_phage	7.3e-52	59.1
WP_099777399.1\|558649_558946_+	hypothetical protein	NA	NA	NA	NA
WP_099777400.1\|558945_559566_+	hypothetical protein	H2BDG4	Pseudomonas_virus	2.1e-06	23.5
WP_099777401.1\|559571_559841_+	hypothetical protein	NA	NA	NA	NA
WP_099777402.1\|560449_560923_+	hypothetical protein	NA	NA	NA	NA
WP_099777403.1\|560988_561378_+	hypothetical protein	NA	NA	NA	NA
WP_099777404.1\|561435_562386_+	S49 family peptidase	NA	NA	NA	NA
WP_099777970.1\|562404_564402_+	hypothetical protein	H7BUS6	unidentified_phage	7.7e-34	24.3
WP_099777405.1\|564458_565115_+	hypothetical protein	NA	NA	NA	NA
WP_099777406.1\|565114_565576_+	hypothetical protein	NA	NA	NA	NA
WP_143738765.1\|565719_566043_+	hypothetical protein	NA	NA	NA	NA
WP_099777407.1\|566020_567316_+	site-specific DNA-methyltransferase	E4ZFL4	Streptococcus_phage	2.9e-74	42.5

DBSCAN-SWA_39

576633 : 580530

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777412.1\|576633_580530_+	hypothetical protein	H7BUR2	unidentified_phage	4.8e-56	25.2

DBSCAN-SWA_40

587769 : 592389

Phage_DP-2017a(33.33%)

integrase

attL 582373:582387|attR 598641:598655

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
582373:582387	attL	NA	NA	NA	NA
WP_099777417.1\|587769_588342_+	N-acetylmuramoyl-L-alanine amidase	A0A1Q1PVL9	Phage_DP-2017a	2.8e-13	32.3
WP_099777418.1\|588362_588686_+	hypothetical protein	NA	NA	NA	NA
WP_023847663.1\|588762_589068_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155243198.1\|589246_589405_+	hypothetical protein	NA	NA	NA	NA
WP_157766522.1\|589451_589670_+	hypothetical protein	NA	NA	NA	NA
WP_099777420.1\|589686_590580_+\|integrase	tyrosine-type recombinase/integrase	S0A5Q5	Cellulophaga_phage	2.2e-17	26.7
WP_039442062.1\|590669_590801_+	hypothetical protein	NA	NA	NA	NA
WP_099777972.1\|590852_591101_+	DUF5053 domain-containing protein	NA	NA	NA	NA
WP_099777421.1\|591231_592389_-\|integrase	site-specific integrase	H7BUS0	unidentified_phage	2.9e-70	35.9
598641:598655	attR	NA	NA	NA	NA

DBSCAN-SWA_41

605266 : 606638

Shigella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777208.1\|605266_606638_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-09	24.8

DBSCAN-SWA_42

611395 : 616544

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777428.1\|611395_613483_+	M3 family metallopeptidase	A0A1V0SID3	Klosneuvirus	5.2e-25	22.1
WP_005875043.1\|613579_614227_+	hypothetical protein	NA	NA	NA	NA
WP_099777429.1\|614277_615630_+	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_099777974.1\|615737_616544_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BUR2	Microcystis_phage	3.6e-35	43.9

DBSCAN-SWA_43

620069 : 622436

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039439117.1\|620069_622436_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	2.2e-141	38.9

DBSCAN-SWA_44

637030 : 638767

Klosneuvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777436.1\|637030_638767_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	1.7e-90	37.6

DBSCAN-SWA_45

644255 : 647216

Aeropyrum_pernix_spindle-shaped_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023846950.1\|644255_645401_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	2.9e-25	31.6
WP_004585466.1\|645527_646466_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_099777440.1\|646517_647216_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-29	32.5

DBSCAN-SWA_46

652708 : 662323

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777978.1\|652708_654343_-	site-specific DNA-methyltransferase	A0A220NUF4	Escherichia_phage	1.0e-76	40.4
WP_099777443.1\|654494_654947_-	hypothetical protein	NA	NA	NA	NA
WP_099777444.1\|655018_657916_-	DEAD/DEAH box helicase	A0A2H4J643	uncultured_Caudovirales_phage	1.7e-212	43.4
WP_088492784.1\|657940_658150_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023846945.1\|658507_659710_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_077085417.1\|659743_662323_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.9e-109	33.8

DBSCAN-SWA_47

672249 : 673776

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777450.1\|672249_673776_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-54	41.6

DBSCAN-SWA_48

683271 : 684351

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777454.1\|683271_684351_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	7.1e-18	27.3

DBSCAN-SWA_49

696974 : 698783

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021661544.1\|696974_698783_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	6.1e-46	39.1

DBSCAN-SWA_50

707267 : 707753

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012457864.1\|707267_707753_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.9e-28	42.9

DBSCAN-SWA_51

718250 : 721538

Phage_TP(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010956336.1\|718250_719495_+	hypothetical protein	Q6DW11	Phage_TP	1.2e-16	24.7
WP_004585363.1\|719550_719970_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_021680175.1\|720054_720825_+	peroxide stress protein YaaA	NA	NA	NA	NA
WP_021663573.1\|720962_721538_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.3e-39	39.7

DBSCAN-SWA_52

726341 : 728282

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021663215.1\|726341_728282_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	8.3e-09	28.2

DBSCAN-SWA_53

736517 : 739917

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005874689.1\|736517_737582_-	dTDP-glucose 4,6-dehydratase	A0A1D8EQC0	Escherichia_phage	7.3e-84	48.6
WP_099777473.1\|737588_738446_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.6e-36	36.8
WP_005874594.1\|738442_739033_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.4e-44	52.8
WP_004584094.1\|739047_739917_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.1e-104	63.2

DBSCAN-SWA_54

751406 : 752492

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777476.1\|751406_752492_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.3e-19	28.1

DBSCAN-SWA_55

773273 : 776687

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777485.1\|773273_776687_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	1.2e-156	30.5

DBSCAN-SWA_56

780895 : 786298

Ugandan_cassava_brown_streak_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023847148.1\|780895_781480_+	non-canonical purine NTP diphosphatase	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	2.8e-13	31.0
WP_039416951.1\|781467_783798_+	hypothetical protein	NA	NA	NA	NA
WP_099777486.1\|783849_785253_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	7.7e-57	31.5
WP_021664191.1\|785575_786298_-	ion transporter	V9LYM7	Vibrio_phage	1.2e-05	35.6

DBSCAN-SWA_57

798401 : 806505

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777490.1\|798401_800609_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	9.8e-91	33.3
WP_004584027.1\|800616_801120_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_099777491.1\|801110_802445_+	MATE family efflux transporter	NA	NA	NA	NA
WP_099777492.1\|802600_803716_+	AhpC/TSA family protein	A0A1J0GW78	Streptomyces_phage	3.8e-06	30.4
WP_088492411.1\|803919_806505_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	6.0e-71	41.8

DBSCAN-SWA_58

817447 : 820144

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777498.1\|817447_820144_+	DNA gyrase/topoisomerase IV subunit A	A0A0H3UZ54	Geobacillus_virus	9.7e-40	30.1

DBSCAN-SWA_59

845371 : 846031

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005875129.1\|845371_846031_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-31	41.3

DBSCAN-SWA_60

859275 : 860883

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005873499.1\|859275_860883_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	3.9e-129	49.3

DBSCAN-SWA_61

864058 : 864760

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583974.1\|864058_864760_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.6e-25	31.2

DBSCAN-SWA_62

875296 : 875956

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021677028.1\|875296_875956_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-37	42.0

DBSCAN-SWA_63

886729 : 888694

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058018697.1\|886729_888694_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.7e-139	44.7

DBSCAN-SWA_64

893725 : 895085

Shigella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777520.1\|893725_895085_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.1e-11	26.1

DBSCAN-SWA_65

905664 : 920014

Bacillus_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777526.1\|905664_907515_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.9e-56	31.7
WP_099777527.1\|907548_909060_+	GH3 auxin-responsive promoter family protein	NA	NA	NA	NA
WP_099777528.1\|909112_911308_+	ribonuclease R	Q0GXV6	Lactococcus_phage	4.7e-61	31.9
WP_088223874.1\|911499_911805_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_005874497.1\|911985_912240_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_004583938.1\|912655_913681_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.3e-65	40.9
WP_012457475.1\|913680_914163_+	CinA family protein	B5TK85	Pseudomonas_phage	2.7e-17	38.5
WP_013815509.1\|914196_915615_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_099777529.1\|915624_916488_+	hypothetical protein	NA	NA	NA	NA
WP_004583934.1\|916521_917013_+	nucleoside deaminase	S4VYZ2	Pandoravirus	9.1e-21	36.0
WP_099777530.1\|917208_917712_-	thiol peroxidase	NA	NA	NA	NA
WP_099777531.1\|917793_918444_-	O-methyltransferase	NA	NA	NA	NA
WP_097626771.1\|918544_918970_-	3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_099777532.1\|919087_920014_+	tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	9.7e-32	29.5

DBSCAN-SWA_66

926725 : 927544

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777535.1\|926725_927544_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	7.9e-54	45.6

DBSCAN-SWA_67

932867 : 946015

Tenacibaculum_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583918.1\|932867_933377_+	redoxin domain-containing protein	A0A1B4XX21	Tenacibaculum_phage	7.0e-08	50.0
WP_099777539.1\|933834_934920_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	3.4e-20	28.4
WP_061156828.1\|935336_935933_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_099777540.1\|935969_937298_-	gliding motility-associated protein GldE	NA	NA	NA	NA
WP_004583915.1\|937315_937786_-	single-stranded DNA-binding protein	A0A0P0I829	Klebsiella_phage	1.9e-20	49.5
WP_005874484.1\|937836_938763_-	hydrogen peroxide-inducible genes activator	NA	NA	NA	NA
WP_005874493.1\|938835_939600_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.1e-36	31.7
WP_097530120.1\|939656_940742_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_021678787.1\|940746_942540_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	6.6e-45	26.6
WP_005874491.1\|942711_942912_+	hypothetical protein	NA	NA	NA	NA
WP_004583909.1\|943635_944703_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_012457449.1\|944722_946015_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	5.2e-68	38.7

DBSCAN-SWA_68

949816 : 955546

Cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005874167.1\|949816_950569_-	Fe-S cluster assembly ATPase SufC	A0A285PWH2	Cedratvirus	4.2e-09	31.7
WP_004583905.1\|950608_952054_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_005874174.1\|952087_952579_-	CvpA family protein	NA	NA	NA	NA
WP_012457447.1\|952606_955546_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	4.6e-19	23.9

DBSCAN-SWA_69

963174 : 977347

Streptococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021662654.1\|963174_963876_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.8e-45	46.2
WP_004583890.1\|963920_964775_+	hypothetical protein	NA	NA	NA	NA
WP_080998249.1\|964924_965740_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_021661800.1\|966684_967353_-	uracil-DNA glycosylase	J9QYL4	Leporid_alphaherpesvirus	7.7e-47	44.3
WP_099777543.1\|967386_968907_-	hypothetical protein	NA	NA	NA	NA
WP_099777544.1\|968978_970580_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	7.8e-21	27.2
WP_005874491.1\|970820_971021_+	hypothetical protein	NA	NA	NA	NA
WP_004583881.1\|971400_972024_+	hypothetical protein	NA	NA	NA	NA
WP_099777546.1\|972845_975311_+	PKD domain-containing protein	A0A1V0SLL0	Klosneuvirus	5.8e-23	40.1
WP_099777547.1\|975389_976688_-	DUF1343 domain-containing protein	NA	NA	NA	NA
WP_004583877.1\|976684_977347_-	fructose-6-phosphate aldolase	H8ZMU3	Synechococcus_phage	1.3e-46	47.2

DBSCAN-SWA_70

983754 : 990750

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777550.1\|983754_984246_+	3'-5' exonuclease	A0A1S5SFA9	Streptococcus_phage	1.3e-19	35.0
WP_010955950.1\|985588_986128_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_097633059.1\|986080_986794_-	hydrolase TatD	NA	NA	NA	NA
WP_004583840.1\|986777_987008_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.8e-16	58.2
WP_023847052.1\|987013_987427_-	ribonuclease P protein component	NA	NA	NA	NA
WP_004583842.1\|987423_988170_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_012457415.1\|988160_988868_-	DUF4271 domain-containing protein	NA	NA	NA	NA
WP_099777551.1\|988918_989137_-	hypothetical protein	NA	NA	NA	NA
WP_012457417.1\|989169_990750_-	peptide chain release factor 3	A0A2K5B2A5	Erysipelothrix_phage	1.5e-32	25.9

DBSCAN-SWA_71

1003966 : 1008386

Ralstonia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777558.1\|1003966_1005052_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.9e-19	27.8
WP_099777559.1\|1005560_1008386_-	insulinase family protein	A0A2P1EL85	Moumouvirus	2.0e-19	34.0

DBSCAN-SWA_72

1013373 : 1014138

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021662055.1\|1013373_1014138_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.9e-25	42.2

DBSCAN-SWA_73

1045776 : 1047819

Megavirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777570.1\|1045776_1047819_-\|tRNA	methionine--tRNA ligase	K7Y9Y6	Megavirus	2.6e-85	34.5

DBSCAN-SWA_74

1054355 : 1059662

Cafeteria_roenbergensis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777571.1\|1054355_1056425_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	2.2e-100	34.8
WP_099777572.1\|1056554_1057295_-	ComF family protein	NA	NA	NA	NA
WP_099777573.1\|1057278_1057767_-	RecX family transcriptional regulator	NA	NA	NA	NA
WP_099777574.1\|1057763_1058645_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_099777575.1\|1058669_1059662_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	2.3e-39	34.0

DBSCAN-SWA_75

1063028 : 1063982

uncultured_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583795.1\|1063028_1063982_+	signal recognition particle-docking protein FtsY	D6PHS7	uncultured_phage	1.3e-18	39.7

DBSCAN-SWA_76

1069854 : 1073645

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097555183.1\|1069854_1070880_+	agmatine deiminase family protein	M1ICB7	Acanthocystis_turfacea_Chlorella_virus	2.6e-38	29.0
WP_088476992.1\|1070897_1071776_+	carbon-nitrogen hydrolase	M1HCD5	Acanthocystis_turfacea_Chlorella_virus	5.2e-51	39.0
WP_012457369.1\|1071991_1072768_+	ParA family protein	Q8JL10	Natrialba_phage	1.6e-24	38.0
WP_099777580.1\|1072775_1073645_+	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	2.5e-13	36.2

DBSCAN-SWA_77

1084854 : 1085601

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005875265.1\|1084854_1085601_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	A0A1X9IGJ2	Lactococcus_phage	4.3e-06	36.1

DBSCAN-SWA_78

1089504 : 1094473

Pigeonpox_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010955931.1\|1089504_1090740_+	alkaline phosphatase family protein	A0A068EE11	Pigeonpox_virus	5.8e-56	31.1
WP_058018613.1\|1090736_1091285_+	DUF4924 family protein	NA	NA	NA	NA
WP_004583768.1\|1091288_1091909_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	6.3e-19	43.7
WP_004583767.1\|1091969_1092545_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_004583766.1\|1092740_1093007_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	6.4e-13	50.0
WP_088492579.1\|1093312_1094473_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	3.1e-27	26.6

DBSCAN-SWA_79

1106928 : 1117323

Streptococcus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043894640.1\|1106928_1108596_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.1e-140	51.6
WP_021666050.1\|1108871_1109015_-	hypothetical protein	NA	NA	NA	NA
WP_099777594.1\|1109200_1109770_-	serine acetyltransferase	A0A1L2JYI5	Streptococcus_phage	8.1e-13	31.8
WP_099777595.1\|1109777_1110986_-	UDP-N-acetyl-D-mannosamine dehydrogenase	A0A127AXI2	Bacillus_phage	1.1e-24	25.3
WP_099777597.1\|1111230_1112337_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_099777598.1\|1112783_1113161_+	hypothetical protein	NA	NA	NA	NA
WP_099777599.1\|1113722_1115750_-	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	9.8e-53	33.0
WP_099777600.1\|1116237_1117323_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.2e-19	27.5

DBSCAN-SWA_80

1126139 : 1130137

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777603.1\|1126139_1127441_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	8.0e-16	25.8
WP_099777993.1\|1127430_1128423_-	biotin synthase BioB	NA	NA	NA	NA
WP_004584705.1\|1128604_1130137_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.9e-34	27.6

DBSCAN-SWA_81

1133373 : 1133793

Cellulophaga_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021662386.1\|1133373_1133793_+	DUF3127 domain-containing protein	S0A1J4	Cellulophaga_phage	1.3e-12	35.8

DBSCAN-SWA_82

1146734 : 1148107

Shigella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777609.1\|1146734_1148107_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.7e-09	28.0

DBSCAN-SWA_83

1155461 : 1157873

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005873771.1\|1155461_1156403_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	4.7e-42	33.5
WP_012457281.1\|1156589_1157873_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.4e-52	31.6

DBSCAN-SWA_84

1174397 : 1175769

Shigella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777609.1\|1174397_1175769_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.7e-09	28.0

DBSCAN-SWA_85

1178937 : 1179747

Paenibacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005873709.1\|1178937_1179747_-	MBL fold metallo-hydrolase	A0A0C5AJ36	Paenibacillus_phage	2.1e-30	32.4

DBSCAN-SWA_86

1205069 : 1208806

environmental_Halophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012457318.1\|1205069_1206407_-	purine permease	H9YQ34	environmental_Halophage	2.6e-22	45.9
WP_021663279.1\|1206569_1207241_-	PorT family protein	NA	NA	NA	NA
WP_099777625.1\|1207300_1208806_-	LysM peptidoglycan-binding domain-containing protein	M1HNA7	Bacillus_virus	4.3e-05	29.8

DBSCAN-SWA_87

1219859 : 1221407

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777632.1\|1219859_1221407_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	1.4e-43	30.0

DBSCAN-SWA_88

1226188 : 1227148

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_054191261.1\|1226188_1227148_-	NAD(P)-binding domain-containing protein	A0A1J0F959	Only_Syngen_Nebraska_virus	2.6e-19	25.9

DBSCAN-SWA_89

1239160 : 1240246

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777637.1\|1239160_1240246_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	5.8e-20	28.4

DBSCAN-SWA_90

1247577 : 1259190

Yellowstone_lake_phycodnavirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005874965.1\|1247577_1248726_-	diaminopimelate decarboxylase	A0A0P0YN97	Yellowstone_lake_phycodnavirus	3.6e-20	27.3
WP_021677241.1\|1248754_1250095_-	aspartate kinase	NA	NA	NA	NA
WP_012457239.1\|1250112_1250853_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.6e-24	33.5
WP_043894279.1\|1251246_1252260_+	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	1.9e-17	43.9
WP_099777639.1\|1252741_1253845_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_099777640.1\|1254048_1256070_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QNJ1	Ostreococcus_lucimarinus_virus	1.6e-100	45.1
WP_004583444.1\|1256098_1256953_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_097652058.1\|1257135_1259190_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.8e-46	27.7

DBSCAN-SWA_91

1262341 : 1272644

Aeromonas_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583439.1\|1262341_1263622_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.1e-89	46.8
WP_004583436.1\|1264852_1265218_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_099777642.1\|1265496_1269183_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	5.3e-190	33.5
WP_004583434.1\|1269231_1269546_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	3.2e-19	44.3
WP_099777643.1\|1269632_1270001_-	hypothetical protein	NA	NA	NA	NA
WP_099777644.1\|1270376_1272644_+	hypothetical protein	A0A1I9SA50	Rhodococcus_phage	1.6e-40	45.6

DBSCAN-SWA_92

1288265 : 1289942

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013815116.1\|1288265_1289942_+	sulfate permease	A0A2H4J153	uncultured_Caudovirales_phage	2.5e-38	27.7

DBSCAN-SWA_93

1297986 : 1299015

Pacmanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583413.1\|1297986_1299015_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A1X6WGT4	Pacmanvirus	1.4e-15	24.7

DBSCAN-SWA_94

1302213 : 1304793

Cronobacter_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777654.1\|1302213_1304793_-\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	3.1e-128	40.3

DBSCAN-SWA_95

1308380 : 1309088

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013815104.1\|1308380_1309088_-	NAD-dependent deacylase	R9TG77	Vibrio_phage	5.1e-33	37.5

DBSCAN-SWA_96

1331780 : 1338078

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777664.1\|1331780_1334639_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.0e-224	43.5
WP_004585612.1\|1334662_1334917_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_099777665.1\|1335166_1336186_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_099777666.1\|1336461_1338078_+	ABC-F family ATP-binding cassette domain-containing protein	A0A1V0SGN0	Hokovirus	7.8e-45	26.4

DBSCAN-SWA_97

1345808 : 1355658

Tupanvirus(40.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777668.1\|1345808_1346486_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.2e-20	41.9
WP_021679879.1\|1346521_1348609_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_099777669.1\|1348605_1350543_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.8e-54	27.8
WP_099777670.1\|1350784_1351666_-	peptidase	NA	NA	NA	NA
WP_053444622.1\|1351874_1352672_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_004585599.1\|1352904_1353699_+	thymidylate synthase	E5DV96	Deep-sea_thermophilic_phage	3.0e-98	61.7
WP_004585598.1\|1353744_1354233_+	dihydrofolate reductase	J9PU01	Bacillus_phage	7.4e-23	40.9
WP_099777671.1\|1354293_1355658_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	2.7e-46	31.8

DBSCAN-SWA_98

1379237 : 1381913

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021678710.1\|1379237_1381913_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	2.0e-37	26.6

DBSCAN-SWA_99

1390874 : 1393455

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010955917.1\|1390874_1391495_+	SIS domain-containing protein	Q7Y583	Enterobacteria_phage	9.1e-18	32.6
WP_099777678.1\|1391640_1393455_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.4e-58	34.8

DBSCAN-SWA_100

1400755 : 1401697

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583736.1\|1400755_1401697_+	LysM peptidoglycan-binding domain-containing protein	A0A0A7RUS8	Clostridium_phage	8.9e-17	39.5

DBSCAN-SWA_101

1411891 : 1418346

Leptospira_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777683.1\|1411891_1415011_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.6e-83	25.3
WP_012458684.1\|1415027_1416206_+	TolC family protein	NA	NA	NA	NA
WP_099777684.1\|1416303_1418346_-	AAA family ATPase	H7BUJ6	unidentified_phage	5.2e-78	39.6

DBSCAN-SWA_102

1425214 : 1479392

Ralstonia_phage(30.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777687.1\|1425214_1426969_-	single-stranded-DNA-specific exonuclease RecJ	A0A218KBX3	Bacillus_phage	5.5e-44	29.1
WP_021664137.1\|1427428_1428616_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_099777688.1\|1428712_1429039_+	hypothetical protein	NA	NA	NA	NA
WP_099777609.1\|1429092_1430464_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.7e-09	28.0
WP_157766536.1\|1430547_1430646_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_143740097.1\|1430614_1430737_+	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_039416763.1\|1430838_1431372_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_043876513.1\|1431463_1431925_+	hypothetical protein	NA	NA	NA	NA
WP_004583671.1\|1431933_1432443_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_043895400.1\|1432476_1435029_+\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_099777689.1\|1435465_1436551_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	9.9e-20	28.4
WP_157766537.1\|1436715_1436808_+	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_099777690.1\|1437122_1439054_-	LTA synthase family protein	NA	NA	NA	NA
WP_099777691.1\|1439057_1441601_-	hypothetical protein	NA	NA	NA	NA
WP_099777692.1\|1441765_1442737_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	6.2e-13	32.4
WP_099777693.1\|1443282_1448403_-	Arg-gingipain RgpA	NA	NA	NA	NA
WP_099777609.1\|1448949_1450321_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.7e-09	28.0
WP_130267027.1\|1450437_1450584_+	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_099777694.1\|1451184_1452273_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_099777695.1\|1452532_1453513_+	dihydroorotate dehydrogenase-like protein	NA	NA	NA	NA
WP_004583707.1\|1453578_1454250_+	OmpA family protein	NA	NA	NA	NA
WP_099777696.1\|1454355_1455009_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_054190921.1\|1455037_1455931_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_004583703.1\|1456158_1456434_+	hypothetical protein	NA	NA	NA	NA
WP_004583702.1\|1456689_1457067_+	hypothetical protein	NA	NA	NA	NA
WP_005874417.1\|1457079_1457460_+	hypothetical protein	NA	NA	NA	NA
WP_099777697.1\|1457550_1459836_+	AAA family ATPase	H7BUJ6	unidentified_phage	4.3e-81	42.1
WP_097632973.1\|1459830_1461195_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_099777698.1\|1461458_1462214_-	hypothetical protein	NA	NA	NA	NA
WP_043894085.1\|1462231_1463326_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_097555382.1\|1463458_1463599_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_088223896.1\|1465627_1466359_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_004583683.1\|1466719_1467196_+	histidinol phosphate phosphatase	NA	NA	NA	NA
WP_099777699.1\|1467335_1467785_+	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	2.7e-27	45.6
WP_077083158.1\|1467781_1468003_+	hypothetical protein	NA	NA	NA	NA
WP_013815318.1\|1468071_1468983_-	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	3.4e-05	41.3
WP_005874415.1\|1469014_1469692_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_021662404.1\|1469892_1470684_+	sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA	NA	NA	NA
WP_004583676.1\|1470706_1472179_+	NADPH-dependent glutamate synthase	NA	NA	NA	NA
WP_099777700.1\|1472212_1474726_+	primosomal protein N'	NA	NA	NA	NA
WP_004583674.1\|1474752_1475148_-	hypothetical protein	NA	NA	NA	NA
WP_012458659.1\|1475215_1475851_-	DUF4294 domain-containing protein	NA	NA	NA	NA
WP_130267025.1\|1476048_1476195_+	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_099777295.1\|1477587_1478673_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.9e-19	27.8
WP_099777702.1\|1478636_1479392_-	hypothetical protein	A0A077K814	Ralstonia_phage	1.5e-11	33.3

DBSCAN-SWA_103

1508269 : 1513899

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013815288.1\|1508269_1510771_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	6.5e-06	26.8
WP_010956471.1\|1511340_1512078_+	DNA repair protein RecO	NA	NA	NA	NA
WP_054191584.1\|1512150_1513899_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	5.5e-113	42.5

DBSCAN-SWA_104

1524161 : 1525451

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088224111.1\|1524161_1525451_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.5e-107	50.6

DBSCAN-SWA_105

1544748 : 1548780

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021679100.1\|1544748_1545768_-	patatin-like phospholipase family protein	A0A1V0SKV5	Klosneuvirus	1.1e-36	32.8
WP_004583541.1\|1545818_1547291_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	3.3e-42	29.9
WP_097552808.1\|1547421_1548780_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	6.1e-59	38.6

DBSCAN-SWA_106

1562036 : 1564887

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777733.1\|1562036_1563197_+	glycerate kinase	W6LM47	Streptococcus_phage	2.1e-44	37.4
WP_099777734.1\|1563335_1563833_+	flavodoxin	NA	NA	NA	NA
WP_004583522.1\|1563997_1564351_+	DUF2023 family protein	NA	NA	NA	NA
WP_010956425.1\|1564431_1564887_+	dCMP deaminase family protein	H6WFU3	Cyanophage	8.7e-26	40.8

DBSCAN-SWA_107

1568552 : 1570572

Croceibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021679194.1\|1568552_1569332_+	3'-5' exonuclease	I6R9X8	Croceibacter_phage	9.6e-41	37.8
WP_077110955.1\|1569357_1570572_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.1e-32	31.5

DBSCAN-SWA_108

1574541 : 1575627

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777738.1\|1574541_1575627_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.3e-19	28.1

DBSCAN-SWA_109

1591800 : 1592886

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777747.1\|1591800_1592886_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	5.8e-20	28.4

DBSCAN-SWA_110

1604217 : 1605918

Escherichia_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777752.1\|1604217_1605918_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	5.3e-169	54.2

DBSCAN-SWA_111

1615503 : 1616079

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021678205.1\|1615503_1616079_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.1e-09	28.5

DBSCAN-SWA_112

1622891 : 1628905

Ralstonia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777755.1\|1622891_1623977_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	9.3e-18	27.5
WP_004583602.1\|1625652_1626057_+	30S ribosomal protein S12	NA	NA	NA	NA
WP_021664541.1\|1626292_1626769_+	30S ribosomal protein S7	NA	NA	NA	NA
WP_099777756.1\|1626781_1628905_+	elongation factor G	E4ZFJ7	Streptococcus_phage	4.5e-48	24.6

DBSCAN-SWA_113

1657563 : 1664484

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777765.1\|1657563_1660344_+	DNA polymerase I	J9PVA4	Bacillus_phage	1.5e-67	31.0
WP_005874140.1\|1660490_1661312_-	hypothetical protein	NA	NA	NA	NA
WP_099777766.1\|1661598_1664484_+	response regulator	Q6XM27	Feldmannia_irregularis_virus	1.0e-15	28.4

DBSCAN-SWA_114

1674364 : 1676653

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004583475.1\|1674364_1676653_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2K9LAT2	Tupanvirus	2.3e-10	30.9

DBSCAN-SWA_115

1680018 : 1682040

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777770.1\|1680018_1682040_-	DNA primase	A0A1B0WMR3	Flavobacterium_phage	3.2e-48	34.4

DBSCAN-SWA_116

1689568 : 1690846

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005874130.1\|1689568_1690846_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	7.3e-163	69.3

DBSCAN-SWA_117

1694881 : 1697005

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777771.1\|1694881_1697005_-	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	8.1e-66	39.5

DBSCAN-SWA_118

1721657 : 1726838

Catovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099778017.1\|1721657_1722281_-	uridine kinase	A0A1V0SAA3	Catovirus	9.7e-36	40.6
WP_012458484.1\|1722335_1723523_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	V5LQ39	Emiliania_huxleyi_virus	9.8e-53	35.2
WP_043894003.1\|1723889_1724384_-	O-acetyl-ADP-ribose deacetylase	F1SVT2	Red_sea_bream_iridovirus	1.3e-38	50.6
WP_021662125.1\|1724466_1725255_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004584719.1\|1725283_1725601_-	DUF59 domain-containing protein	NA	NA	NA	NA
WP_099777776.1\|1725686_1726838_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	6.8e-27	34.1

DBSCAN-SWA_119

1733541 : 1734564

Tupanvirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023847543.1\|1733541_1734564_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-28	32.5

DBSCAN-SWA_120

1738602 : 1746094

Synechococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777780.1\|1738602_1739184_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-17	32.2
WP_004584733.1\|1739352_1739589_+	acyl carrier protein	A0A1P8VWH3	Flavobacterium_phage	1.1e-05	34.7
WP_004584734.1\|1739598_1740855_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_004584735.1\|1740866_1741652_+	ribonuclease III	A0A1C9C5A7	Heterosigma_akashiwo_virus	4.4e-17	30.0
WP_021662862.1\|1741778_1744724_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	6.4e-21	29.2
WP_099778019.1\|1744941_1745388_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_021665709.1\|1745464_1746094_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.6e-16	31.6

DBSCAN-SWA_121

1760308 : 1760746

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584754.1\|1760308_1760746_+	hypothetical protein	T1S9H7	Salmonella_phage	7.1e-09	32.3

DBSCAN-SWA_122

1766451 : 1767123

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777788.1\|1766451_1767123_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-33	38.5

DBSCAN-SWA_123

1771712 : 1773188

Microcystis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458451.1\|1771712_1773188_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	1.7e-14	34.0

DBSCAN-SWA_124

1778300 : 1785204

Sulfitobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584770.1\|1778300_1778879_-	N-acetylmuramidase	A0A088F6V6	Sulfitobacter_phage	6.1e-16	34.0
WP_099777793.1\|1779136_1779418_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_077070496.1\|1779476_1780367_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_004584780.1\|1780382_1781507_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	5.8e-23	32.5
WP_099777794.1\|1781499_1785204_-	phosphoribosylformylglycinamidine synthase	Q8UZJ7	Macacine_gammaherpesvirus	2.9e-42	26.3

DBSCAN-SWA_125

1795550 : 1799750

Salmonella_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584796.1\|1795550_1796504_-	glycosyltransferase family 2 protein	B9UDL7	Salmonella_phage	1.3e-20	28.0
WP_099777796.1\|1796500_1797040_-	DUF4199 domain-containing protein	NA	NA	NA	NA
WP_010955975.1\|1797407_1797716_+	hypothetical protein	NA	NA	NA	NA
WP_004584799.1\|1797776_1798094_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_004584800.1\|1798121_1798379_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_005874225.1\|1798478_1799750_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.3e-66	41.5

DBSCAN-SWA_126

1807580 : 1809074

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777799.1\|1807580_1809074_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	1.3e-83	37.9

DBSCAN-SWA_127

1819806 : 1820766

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061156468.1\|1819806_1820766_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	1.0e-52	36.4

DBSCAN-SWA_128

1832102 : 1836040

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777809.1\|1832102_1833131_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.4e-71	40.8
WP_099777810.1\|1833173_1835270_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_021663085.1\|1835269_1836040_+	HAD hydrolase-like protein	M1HHJ7	Acanthocystis_turfacea_Chlorella_virus	7.6e-06	26.7

DBSCAN-SWA_129

1841769 : 1844402

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584886.1\|1841769_1842684_+	aspartate carbamoyltransferase	M1I6M4	Paramecium_bursaria_Chlorella_virus	8.8e-62	43.0
WP_004584887.1\|1842696_1843152_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_004584888.1\|1843180_1843768_+	flavin reductase family protein	NA	NA	NA	NA
WP_004584889.1\|1843805_1844402_+	LemA family protein	A0A1X9IGG1	Lactococcus_phage	6.0e-19	36.8

DBSCAN-SWA_130

1848689 : 1853508

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777814.1\|1848689_1849895_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	5.1e-25	25.8
WP_077083777.1\|1849891_1850494_-	3'-5' exonuclease domain-containing protein 2	G5CQ33	Megavirus	2.2e-08	29.3
WP_021664554.1\|1850534_1851095_-	DUF5063 domain-containing protein	NA	NA	NA	NA
WP_005873796.1\|1851573_1853508_+	type IIA DNA topoisomerase subunit B	A0A172JHT4	Bacillus_phage	2.3e-59	29.9

DBSCAN-SWA_131

1867748 : 1881927

Brevibacillus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097627005.1\|1867748_1868951_+	ribosome-associated translation inhibitor RaiA	A0A0K2CP59	Brevibacillus_phage	5.5e-27	30.5
WP_010955998.1\|1869344_1870532_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	1.7e-12	26.0
WP_004584915.1\|1870690_1870894_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_004584916.1\|1870915_1871455_+	transcription termination/antitermination factor NusG	A0A291AUS6	Sinorhizobium_phage	4.9e-12	29.1
WP_010955999.1\|1871523_1871961_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_004584918.1\|1871981_1872680_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_004584919.1\|1872695_1873220_+	50S ribosomal protein L10	NA	NA	NA	NA
WP_010956001.1\|1873261_1873639_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_021676705.1\|1873750_1877560_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	1.1e-28	33.5
WP_004584922.1\|1877625_1881927_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	4.6e-68	27.0

DBSCAN-SWA_132

1894360 : 1896217

Wolbachia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777822.1\|1894360_1896217_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.1e-53	27.8

DBSCAN-SWA_133

1899909 : 1904106

Acanthamoeba_polyphaga_mimivirus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584941.1\|1899909_1902087_-	DNA helicase RecQ	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	2.7e-80	36.3
WP_004584942.1\|1902165_1903401_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.9e-121	52.0
WP_010956008.1\|1903437_1904106_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.6e-42	48.4

DBSCAN-SWA_134

1913229 : 1914315

Ralstonia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777827.1\|1913229_1914315_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	2.2e-19	27.8

DBSCAN-SWA_135

1934536 : 1935244

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777833.1\|1934536_1935244_+	HesA/MoeB/ThiF family protein	A0A1V0SCZ9	Indivirus	2.3e-09	29.6

DBSCAN-SWA_136

1951177 : 1952449

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777839.1\|1951177_1952449_-	adenylosuccinate synthase	A0A0B5J049	Pandoravirus	4.0e-52	30.5

DBSCAN-SWA_137

1965004 : 1971426

Emiliania_huxleyi_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004585010.1\|1965004_1966195_-	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	1.3e-36	28.5
WP_004585011.1\|1966270_1966702_-	hypothetical protein	NA	NA	NA	NA
WP_004585012.1\|1966808_1967417_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_012458309.1\|1967423_1968431_-	YbbR-like domain-containing protein	NA	NA	NA	NA
WP_099777846.1\|1968558_1968897_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_088477120.1\|1968979_1969414_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	3.2e-22	45.5
WP_088223939.1\|1970394_1971426_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	7.0e-07	31.1

DBSCAN-SWA_138

1980816 : 1983540

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097638046.1\|1980816_1981947_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.4e-79	44.0
WP_010956046.1\|1981963_1983046_+	YjgP/YjgQ family permease	NA	NA	NA	NA
WP_012458295.1\|1983078_1983540_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.1e-27	44.7

DBSCAN-SWA_139

1992958 : 1993525

Abalone_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458286.1\|1992958_1993525_-	guanylate kinase	K4JYM5	Abalone_herpesvirus	1.8e-17	37.0

DBSCAN-SWA_140

2005231 : 2016277

uncultured_virus(40.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458280.1\|2005231_2006869_-	chaperonin GroEL	A0A240F779	uncultured_virus	9.0e-190	64.7
WP_004585060.1\|2007128_2007398_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	4.2e-20	56.3
WP_021679591.1\|2007615_2008524_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_004585062.1\|2008520_2010017_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.3e-58	33.7
WP_021665698.1\|2010271_2010556_+	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_004585065.1\|2010671_2012291_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	5.3e-134	47.4
WP_099777857.1\|2012419_2014303_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_054190956.1\|2014393_2016277_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.0e-12	23.0

DBSCAN-SWA_141

2033351 : 2036501

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777860.1\|2033351_2036501_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.0e-101	26.1

DBSCAN-SWA_142

2053449 : 2055117

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043894640.1\|2053449_2055117_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.1e-140	51.6

DBSCAN-SWA_143

2065789 : 2068009

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004584319.1\|2065789_2068009_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.6e-35	27.5

DBSCAN-SWA_144

2075645 : 2088976

Tupanvirus(25.0%)

integrase

attL 2078088:2078102|attR 2097009:2097023

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777862.1\|2075645_2077775_+	type IA DNA topoisomerase	A0A2K9L1Q2	Tupanvirus	4.1e-17	24.9
WP_013815807.1\|2078049_2078481_+	DUF1896 domain-containing protein	NA	NA	NA	NA
2078088:2078102	attL	NA	NA	NA	NA
WP_013815806.1\|2078467_2083960_+	N-6 DNA methylase	A0A248SL14	Klebsiella_phage	5.7e-156	27.3
WP_013815805.1\|2084064_2084382_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004584306.1\|2084365_2084719_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099777863.1\|2084940_2085219_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004584304.1\|2085255_2085558_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004584303.1\|2085607_2085970_-	hypothetical protein	NA	NA	NA	NA
WP_099777864.1\|2085987_2087223_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.0e-28	33.7
WP_021662663.1\|2088106_2088976_-	DNA damage-inducible protein D	A0A1W6JPJ7	Morganella_phage	9.1e-24	33.9
2097009:2097023	attR	NA	NA	NA	NA

DBSCAN-SWA_145

2104291 : 2106477

Ralstonia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777869.1\|2104291_2105377_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	3.4e-20	28.4
WP_099777871.1\|2105655_2106477_-	purine nucleoside phosphorylase I, inosine and guanosine-specific	Q5YBA4	Grouper_iridovirus	1.3e-51	40.8

DBSCAN-SWA_146

2134564 : 2139826

Acinetobacter_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077492189.1\|2134564_2136085_-	glutamine-hydrolyzing GMP synthase	A0A0P0IKJ1	Acinetobacter_phage	7.7e-10	27.6
WP_125026750.1\|2136402_2136588_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_004585129.1\|2136802_2137060_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_021662342.1\|2137276_2138773_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-23	28.9
WP_004585131.1\|2138962_2139826_+	RNA polymerase sigma factor RpoD/SigA	G8CLC7	Synechococcus_phage	1.9e-34	31.6

DBSCAN-SWA_147

2143349 : 2144567

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004585136.1\|2143349_2144567_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-95	46.5

DBSCAN-SWA_148

2158087 : 2162379

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777887.1\|2158087_2159635_+	alkyl hydroperoxide reductase subunit F	G3MA85	Bacillus_virus	1.9e-40	34.4
WP_013816366.1\|2159841_2162379_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.2e-150	40.0

DBSCAN-SWA_149

2165571 : 2169350

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004585175.1\|2165571_2166153_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	3.1e-44	48.9
WP_043895802.1\|2166382_2167249_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_005874516.1\|2168052_2168346_-	RNA-binding protein	NA	NA	NA	NA
WP_010956092.1\|2168594_2169350_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.0e-23	29.0

DBSCAN-SWA_150

2178123 : 2179911

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023847000.1\|2178123_2179911_-	signal peptide peptidase SppA	G8DH45	Emiliania_huxleyi_virus	1.0e-08	27.0

DBSCAN-SWA_151

2184390 : 2185392

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777892.1\|2184390_2185392_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.8e-14	31.9

DBSCAN-SWA_152

2194108 : 2194630

Cafeteria_roenbergensis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005873616.1\|2194108_2194630_-	HAD-IIIA family hydrolase	E3T535	Cafeteria_roenbergensis_virus	2.5e-13	28.7

DBSCAN-SWA_153

2198159 : 2201531

Herpes_simplex_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777899.1\|2198159_2201531_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	3.0e-131	30.6

DBSCAN-SWA_154

2205781 : 2208055

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021664372.1\|2205781_2208055_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	3.7e-08	34.3

DBSCAN-SWA_155

2211331 : 2212090

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021678862.1\|2211331_2212090_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.4e-14	24.7

DBSCAN-SWA_156

2228452 : 2229112

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004585231.1\|2228452_2229112_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-34	38.8

DBSCAN-SWA_157

2249354 : 2251901

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777912.1\|2249354_2251901_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.1e-05	30.0

DBSCAN-SWA_158

2255421 : 2256018

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777914.1\|2255421_2256018_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.4e-31	39.2

DBSCAN-SWA_159

2272837 : 2278216

Bodo_saltans_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039417577.1\|2272837_2273923_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	5.1e-08	27.7
WP_005873546.1\|2273972_2274629_-	PASTA domain-containing protein	NA	NA	NA	NA
WP_157766549.1\|2274798_2274996_-	DUF1661 domain-containing protein	NA	NA	NA	NA
WP_012457761.1\|2275176_2275779_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	5.0e-21	35.9
WP_004584688.1\|2275775_2276327_+	NAD(P)H nitroreductase	NA	NA	NA	NA
WP_097555267.1\|2276385_2277600_+	cysteine desulfurase	Q2XUY6	environmental_halophage	3.1e-102	43.6
WP_021665536.1\|2277610_2278216_+	ribonuclease HII	E3T5H8	Cafeteria_roenbergensis_virus	2.2e-29	40.8

DBSCAN-SWA_160

2286088 : 2286835

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777922.1\|2286088_2286835_-	glycosyltransferase	A0A1V0SAH6	Catovirus	5.1e-07	31.2

DBSCAN-SWA_161

2296072 : 2299431

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012458056.1\|2296072_2296705_+	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	5.3e-05	27.4
WP_099777927.1\|2296757_2297171_+	polyketide cyclase	NA	NA	NA	NA
WP_013816644.1\|2297205_2297670_+	hypothetical protein	NA	NA	NA	NA
WP_013816645.1\|2298042_2298939_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
WP_005874066.1\|2298966_2299431_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.3e-45	68.2

DBSCAN-SWA_162

2307370 : 2309102

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777932.1\|2307370_2308669_-	Y-family DNA polymerase	A0A218MNF2	uncultured_virus	7.1e-73	36.3
WP_013816657.1\|2308676_2309102_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	1.7e-23	39.1

DBSCAN-SWA_163

2323542 : 2327556

Vibrio_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005875438.1\|2323542_2324877_-	PhoH family protein	A0A2I7SAD7	Vibrio_phage	2.8e-48	33.6
WP_004585540.1\|2325033_2326701_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_099777937.1\|2326920_2327556_-\|transposase	transposase	A0A077K814	Ralstonia_phage	1.2e-09	29.7

DBSCAN-SWA_164

2330889 : 2331996

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099777938.1\|2330889_2331996_+	chorismate synthase	A0A291AU41	Pandoravirus	1.5e-87	50.0

DBSCAN-SWA_165

2335058 : 2345823

Staphylococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013816675.1\|2335058_2336189_-	CapA family protein	A0A0N9SJ77	Staphylococcus_phage	6.3e-33	33.0
WP_013816676.1\|2336199_2336694_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_013816677.1\|2336728_2337391_-	7-cyano-7-deazaguanine synthase QueC	A0A2P1JXV3	Rhodococcus_phage	2.4e-45	46.2
WP_043898475.1\|2337796_2338642_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_012458024.1\|2338666_2339341_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_013816679.1\|2339337_2339982_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_099777939.1\|2339986_2342854_+	aminomethyl-transferring glycine dehydrogenase	E3SN07	Prochlorococcus_phage	5.9e-253	48.8
WP_099777940.1\|2343059_2344391_+	DUF3078 domain-containing protein	NA	NA	NA	NA
WP_058018816.1\|2344407_2345823_-	AAA family ATPase	A0A0H3UZA5	Geobacillus_virus	7.6e-12	24.8

DBSCAN-SWA_166

2358412 : 2360576

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021676848.1\|2358412_2359486_-	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	2.2e-80	42.5
WP_088442640.1\|2359478_2360576_-	GDP-mannose 4,6-dehydratase	A0A0E3G468	Synechococcus_phage	8.8e-125	65.0

DBSCAN-SWA_167

2366082 : 2372998

Aeromonas_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004585577.1\|2366082_2366538_-	CYTH domain-containing protein	E5DPT6	Aeromonas_phage	4.3e-09	34.7
WP_004585578.1\|2366561_2367686_-	DUF2027 domain-containing protein	NA	NA	NA	NA
WP_004585579.1\|2367851_2369099_-	DUF1015 domain-containing protein	NA	NA	NA	NA
WP_005874016.1\|2369117_2370038_-	3-phosphoglycerate dehydrogenase	A0A2R8FCS0	Cedratvirus	4.2e-19	27.0
WP_099777944.1\|2370138_2371221_-	phosphoserine transaminase	M1Q1P2	Streptococcus_phage	1.1e-74	42.5
WP_099777208.1\|2371626_2372998_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-09	24.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP024591.1|WP_004584358.1|2039608_2040022_+|PcfK-like-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP024591.1|WP_004584358.1|2039608_2040022_+|PcfK-like-protein

2039608_2040022_+

137 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5815602836879432	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024591

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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