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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024593 Porphyromonas gingivalis strain KCOM 2804 chromosome, complete genome 9 crisprs cas13b,cas3,DEDDh,cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas4,cas7b,cas8b4,cas5,cas6,RT,PD-DExK 1 20 0 3

Results visualization

1. NZ_CP024593
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_1 30013-30132 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_2 375657-375764 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_3 739528-739894 VI-B2
5 spacers
Csx28,cas13b

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_4 917337-917432 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_5 1048083-1048421 TypeIII NA
4 spacers
cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_6 1081972-1091801 Unclear NA
147 spacers
cas2,cas1,cas4,cas3,cas7b,cas8b4,cas5,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_7 1143431-1143526 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_8 1210330-1210425 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024593_9 2087882-2087978 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP024593_9 9.1|2087914|33|NZ_CP024593|CRISPRCasFinder 2087914-2087946 33 NZ_CP024593.1 1080430-1080462 1 0.97

1. spacer 9.1|2087914|33|NZ_CP024593|CRISPRCasFinder matches to position: 1080430-1080462, mismatch: 1, identity: 0.97

tcctccacgatctcggtgtctgatctgcttttt	CRISPR spacer
tcctccacgacctcggtgtctgatctgcttttt	Protospacer
**********.**********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024593_6 6.64|1083783|23|NZ_CP024593|CRT 1083783-1083805 23 NZ_CP024986 Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence 193351-193373 3 0.87
NZ_CP024593_6 6.64|1083783|23|NZ_CP024593|CRT 1083783-1083805 23 NC_024970 Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence 47704-47726 3 0.87
NZ_CP024593_6 6.64|1083783|23|NZ_CP024593|CRT 1083783-1083805 23 NZ_KJ396772 Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence 47704-47726 3 0.87
NZ_CP024593_3 3.4|739763|29|NZ_CP024593|PILER-CR,CRT 739763-739791 29 NC_014249 'Nostoc azollae' 0708 plasmid pAzo01, complete sequence 89231-89259 5 0.828
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NC_014249 'Nostoc azollae' 0708 plasmid pAzo01, complete sequence 89230-89259 5 0.833
NZ_CP024593_3 3.2|739631|29|NZ_CP024593|PILER-CR,CRT 739631-739659 29 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 702287-702315 6 0.793
NZ_CP024593_3 3.2|739631|29|NZ_CP024593|PILER-CR,CRT 739631-739659 29 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 135874-135902 6 0.793
NZ_CP024593_3 3.2|739631|29|NZ_CP024593|PILER-CR,CRT 739631-739659 29 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 135874-135902 6 0.793
NZ_CP024593_3 3.4|739763|29|NZ_CP024593|PILER-CR,CRT 739763-739791 29 NC_029119 Staphylococcus phage SPbeta-like, complete genome 14077-14105 6 0.793
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NZ_CP045304 Legionella longbeachae strain B1445CHC plasmid pB1445CHC_73K, complete sequence 35618-35647 6 0.8
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NZ_CP045307 Legionella longbeachae strain B41211CHC plasmid pB41211CHC_76k, complete sequence 35596-35625 6 0.8
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NC_014544 Legionella longbeachae NSW150 plasmid pLLO, complete sequence 35926-35955 6 0.8
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NZ_CP025493 Legionella sainthelensi strain LA01-117 plasmid pLA01-117_113k, complete sequence 7714-7743 6 0.8
NZ_CP024593_3 3.2|739631|29|NZ_CP024593|PILER-CR,CRT 739631-739659 29 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 135472-135500 7 0.759
NZ_CP024593_3 3.3|739697|29|NZ_CP024593|PILER-CR,CRT 739697-739725 29 NZ_LT907976 Pseudodesulfovibrio profundus strain 500-1 plasmid paDPRO, complete sequence 15253-15281 7 0.759
NZ_CP024593_3 3.5|739829|29|NZ_CP024593|PILER-CR,CRT 739829-739857 29 NZ_CP012478 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence 25258-25286 7 0.759
NZ_CP024593_3 3.7|739630|30|NZ_CP024593|CRISPRCasFinder 739630-739659 30 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 702286-702315 7 0.767
NZ_CP024593_3 3.7|739630|30|NZ_CP024593|CRISPRCasFinder 739630-739659 30 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 135874-135903 7 0.767
NZ_CP024593_3 3.7|739630|30|NZ_CP024593|CRISPRCasFinder 739630-739659 30 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 135874-135903 7 0.767
NZ_CP024593_3 3.8|739696|30|NZ_CP024593|CRISPRCasFinder 739696-739725 30 NZ_LT907976 Pseudodesulfovibrio profundus strain 500-1 plasmid paDPRO, complete sequence 15253-15282 7 0.767
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 NC_029119 Staphylococcus phage SPbeta-like, complete genome 14077-14106 7 0.767
NZ_CP024593_6 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder 1085103-1085136 34 HQ634191 Cyanophage Syn10 genomic sequence 131659-131692 7 0.794
NZ_CP024593_6 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder 1085103-1085136 34 DQ149023 Synechococcus cyanophage syn9, complete genome 17920-17953 7 0.794
NZ_CP024593_6 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder 1085103-1085136 34 NC_008296 Synechococcus phage syn9, complete genome 17920-17953 7 0.794
NZ_CP024593_6 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1088047-1088080 34 NZ_LN831028 Fusobacterium nucleatum subsp. polymorphum strain NCTC10562 plasmid 2, complete sequence 1934-1967 7 0.794
NZ_CP024593_3 3.3|739697|29|NZ_CP024593|PILER-CR,CRT 739697-739725 29 MF479730 Aeromonas phage AS-gz, complete genome 103640-103668 8 0.724
NZ_CP024593_3 3.7|739630|30|NZ_CP024593|CRISPRCasFinder 739630-739659 30 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 135472-135501 8 0.733
NZ_CP024593_3 3.10|739828|30|NZ_CP024593|CRISPRCasFinder 739828-739857 30 NZ_CP012478 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence 25258-25287 8 0.733
NZ_CP024593_6 6.9|1082531|34|NZ_CP024593|PILER-CR,CRISPRCasFinder,CRT 1082531-1082564 34 NZ_CP021355 Rhodococcus sp. S2-17 plasmid pRB98, complete sequence 875765-875798 8 0.765
NZ_CP024593_6 6.37|1084378|35|NZ_CP024593|PILER-CR,CRISPRCasFinder 1084378-1084412 35 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 400465-400499 8 0.771
NZ_CP024593_6 6.38|1084443|35|NZ_CP024593|PILER-CR,CRISPRCasFinder 1084443-1084477 35 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 400465-400499 8 0.771
NZ_CP024593_6 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087387-1087423 37 CP006880 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence 2273933-2273969 8 0.784
NZ_CP024593_6 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1088047-1088080 34 NZ_LN831028 Fusobacterium nucleatum subsp. polymorphum strain NCTC10562 plasmid 2, complete sequence 5679-5712 8 0.765
NZ_CP024593_9 9.1|2087914|33|NZ_CP024593|CRISPRCasFinder 2087914-2087946 33 NZ_CP016459 Blastomonas sp. RAC04 plasmid pBSY18_3, complete sequence 18073-18105 8 0.758
NZ_CP024593_3 3.4|739763|29|NZ_CP024593|PILER-CR,CRT 739763-739791 29 MK893987 Staphylococcus phage PMBT8, complete genome 79385-79413 9 0.69
NZ_CP024593_3 3.8|739696|30|NZ_CP024593|CRISPRCasFinder 739696-739725 30 MF479730 Aeromonas phage AS-gz, complete genome 103640-103669 9 0.7
NZ_CP024593_3 3.9|739762|30|NZ_CP024593|CRISPRCasFinder 739762-739791 30 MK893987 Staphylococcus phage PMBT8, complete genome 79385-79414 9 0.7
NZ_CP024593_6 6.82|1086992|35|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1086992-1087026 35 MN698248 Pelagibacter phage HTVC202P, complete genome 24879-24913 9 0.743
NZ_CP024593_6 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087320-1087356 37 AP014148 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S32-C91, *** SEQUENCING IN PROGRESS *** 28819-28855 9 0.757
NZ_CP024593_6 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087320-1087356 37 AP014143 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S24-C76, *** SEQUENCING IN PROGRESS *** 1468-1504 9 0.757
NZ_CP024593_6 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087320-1087356 37 AP014144 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S25-C77, *** SEQUENCING IN PROGRESS *** 1468-1504 9 0.757
NZ_CP024593_6 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087320-1087356 37 AP014147 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S30-C164, *** SEQUENCING IN PROGRESS *** 1468-1504 9 0.757
NZ_CP024593_6 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087387-1087423 37 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 2186285-2186321 9 0.757
NZ_CP024593_6 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1087387-1087423 37 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 279230-279266 9 0.757
NZ_CP024593_6 6.137|1090619|36|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1090619-1090654 36 NZ_CP045296 Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence 138548-138583 9 0.75
NZ_CP024593_6 6.9|1082531|34|NZ_CP024593|PILER-CR,CRISPRCasFinder,CRT 1082531-1082564 34 NZ_CP030127 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence 578532-578565 10 0.706
NZ_CP024593_6 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder 1085103-1085136 34 KJ803031 Dinoroseobacter phage vBDshPR2C, complete genome 5950-5983 10 0.706
NZ_CP024593_6 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1088047-1088080 34 NC_014628 Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence 217081-217114 10 0.706
NZ_CP024593_6 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder 1085103-1085136 34 KJ621082 Dinoroseobacter phage DFL12phi1, complete genome 68119-68152 11 0.676
NZ_CP024593_6 6.108|1088712|36|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder 1088712-1088747 36 NZ_CP010990 Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence 96334-96369 12 0.667

1. spacer 6.64|1083783|23|NZ_CP024593|CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.87

gctgatatcccccaccagcagca	CRISPR spacer
cctgatgtcccccaccagcagct	Protospacer
 *****.*************** 

2. spacer 6.64|1083783|23|NZ_CP024593|CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.87

gctgatatcccccaccagcagca	CRISPR spacer
cctgatgtcccccaccagcagct	Protospacer
 *****.*************** 

3. spacer 6.64|1083783|23|NZ_CP024593|CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.87

gctgatatcccccaccagcagca	CRISPR spacer
cctgatgtcccccaccagcagct	Protospacer
 *****.*************** 

4. spacer 3.4|739763|29|NZ_CP024593|PILER-CR,CRT matches to NC_014249 ('Nostoc azollae' 0708 plasmid pAzo01, complete sequence) position: , mismatch: 5, identity: 0.828

tataaaagccactgaaaaatatgtaaaag	CRISPR spacer
tataaaagtcactgaaaaataagtaagtc	Protospacer
********.************ ****.  

5. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NC_014249 ('Nostoc azollae' 0708 plasmid pAzo01, complete sequence) position: , mismatch: 5, identity: 0.833

ttataaaagccactgaaaaatatgtaaaag	CRISPR spacer
ttataaaagtcactgaaaaataagtaagtc	Protospacer
*********.************ ****.  

6. spacer 3.2|739631|29|NZ_CP024593|PILER-CR,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 6, identity: 0.793

ttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
tgtaaaagacatgttcatcgacggcgtag	Protospacer
* . .**********.******* *****

7. spacer 3.2|739631|29|NZ_CP024593|PILER-CR,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 6, identity: 0.793

ttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
tgtaaaagacatgttcatcgacggcgtag	Protospacer
* . .**********.******* *****

8. spacer 3.2|739631|29|NZ_CP024593|PILER-CR,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 6, identity: 0.793

ttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
tgtaaaagacatgttcatcgacggcgtag	Protospacer
* . .**********.******* *****

9. spacer 3.4|739763|29|NZ_CP024593|PILER-CR,CRT matches to NC_029119 (Staphylococcus phage SPbeta-like, complete genome) position: , mismatch: 6, identity: 0.793

tataaaagccactgaaaaatatgtaaaag	CRISPR spacer
tataaaagccattaaaaaatatgtgtata	Protospacer
***********.*.**********. * .

10. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NZ_CP045304 (Legionella longbeachae strain B1445CHC plasmid pB1445CHC_73K, complete sequence) position: , mismatch: 6, identity: 0.8

ttataaaagccactgaaaaatatgtaaaag-	CRISPR spacer
ttataaaagccgctgaaaaat-tatatgact	Protospacer
***********.********* *.** .*  

11. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NZ_CP045307 (Legionella longbeachae strain B41211CHC plasmid pB41211CHC_76k, complete sequence) position: , mismatch: 6, identity: 0.8

ttataaaagccactgaaaaatatgtaaaag---	CRISPR spacer
ttataaaagccgctgaaaaat---tacatgact	Protospacer
***********.*********   ** * *   

12. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NC_014544 (Legionella longbeachae NSW150 plasmid pLLO, complete sequence) position: , mismatch: 6, identity: 0.8

ttataaaagccactgaaaaatatgtaaaag---	CRISPR spacer
ttataaaagccgctgaaaaat---tacatgact	Protospacer
***********.*********   ** * *   

13. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NZ_CP025493 (Legionella sainthelensi strain LA01-117 plasmid pLA01-117_113k, complete sequence) position: , mismatch: 6, identity: 0.8

ttataaaagccactgaaaaatatgtaaaag-	CRISPR spacer
ttataaaagccgctgaaaaat-tacataact	Protospacer
***********.********* *..* **  

14. spacer 3.2|739631|29|NZ_CP024593|PILER-CR,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 7, identity: 0.759

ttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
cgtaaaagacatgttcatcgacggcgtag	Protospacer
. . .**********.******* *****

15. spacer 3.3|739697|29|NZ_CP024593|PILER-CR,CRT matches to NZ_LT907976 (Pseudodesulfovibrio profundus strain 500-1 plasmid paDPRO, complete sequence) position: , mismatch: 7, identity: 0.759

ttattggtgatgataaacaacttcctcct	CRISPR spacer
cgctgagtgatgataaacaatttccacct	Protospacer
.  * .**************.**** ***

16. spacer 3.5|739829|29|NZ_CP024593|PILER-CR,CRT matches to NZ_CP012478 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

gatggacgatgatacggcctatttcggtt	CRISPR spacer
cttggacgatgatgcggcctctttccgcc	Protospacer
  ***********.****** **** *..

17. spacer 3.7|739630|30|NZ_CP024593|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.767

cttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
ttgtaaaagacatgttcatcgacggcgtag	Protospacer
.* . .**********.******* *****

18. spacer 3.7|739630|30|NZ_CP024593|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 7, identity: 0.767

cttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
ttgtaaaagacatgttcatcgacggcgtag	Protospacer
.* . .**********.******* *****

19. spacer 3.7|739630|30|NZ_CP024593|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 7, identity: 0.767

cttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
ttgtaaaagacatgttcatcgacggcgtag	Protospacer
.* . .**********.******* *****

20. spacer 3.8|739696|30|NZ_CP024593|CRISPRCasFinder matches to NZ_LT907976 (Pseudodesulfovibrio profundus strain 500-1 plasmid paDPRO, complete sequence) position: , mismatch: 7, identity: 0.767

tttattggtgatgataaacaacttcctcct	CRISPR spacer
tcgctgagtgatgataaacaatttccacct	Protospacer
*.  * .**************.**** ***

21. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to NC_029119 (Staphylococcus phage SPbeta-like, complete genome) position: , mismatch: 7, identity: 0.767

ttataaaagccactgaaaaatatgtaaaag	CRISPR spacer
ctataaaagccattaaaaaatatgtgtata	Protospacer
.***********.*.**********. * .

22. spacer 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to HQ634191 (Cyanophage Syn10 genomic sequence) position: , mismatch: 7, identity: 0.794

--accaagatgtcaagaagtccatcatgatgattgt	CRISPR spacer
taaccata--ctcaagaagtccatggtgatgattgt	Protospacer
  **** .   ************* .**********

23. spacer 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to DQ149023 (Synechococcus cyanophage syn9, complete genome) position: , mismatch: 7, identity: 0.794

--accaagatgtcaagaagtccatcatgatgattgt	CRISPR spacer
taaccata--ctcaagaagtccatggtgatgattgt	Protospacer
  **** .   ************* .**********

24. spacer 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to NC_008296 (Synechococcus phage syn9, complete genome) position: , mismatch: 7, identity: 0.794

--accaagatgtcaagaagtccatcatgatgattgt	CRISPR spacer
taaccata--ctcaagaagtccatggtgatgattgt	Protospacer
  **** .   ************* .**********

25. spacer 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LN831028 (Fusobacterium nucleatum subsp. polymorphum strain NCTC10562 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.794

taaaacaaaaaattttagagattatgttacgatc	CRISPR spacer
taaaacaaaaaaatttagatattataaaactatt	Protospacer
************ ****** *****.  ** **.

26. spacer 3.3|739697|29|NZ_CP024593|PILER-CR,CRT matches to MF479730 (Aeromonas phage AS-gz, complete genome) position: , mismatch: 8, identity: 0.724

ttattggtgatgataaacaacttcctcct	CRISPR spacer
ttatgggtgatgatgaacaacttaacgag	Protospacer
**** *********.********  .   

27. spacer 3.7|739630|30|NZ_CP024593|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 8, identity: 0.733

cttctgaagacatgtttatcgacgtcgtag	CRISPR spacer
tcgtaaaagacatgttcatcgacggcgtag	Protospacer
.. . .**********.******* *****

28. spacer 3.10|739828|30|NZ_CP024593|CRISPRCasFinder matches to NZ_CP012478 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tgatggacgatgatacggcctatttcggtt	CRISPR spacer
acttggacgatgatgcggcctctttccgcc	Protospacer
   ***********.****** **** *..

29. spacer 6.9|1082531|34|NZ_CP024593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.765

gagcctcgatgcatcccgaggcggaagccagcct	CRISPR spacer
aagcctcgattcatcgcgaggcggaagggcgggt	Protospacer
.********* **** ***********   *  *

30. spacer 6.37|1084378|35|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

gcac-ctcttcgggatcgagcaccccgtcttcgcga	CRISPR spacer
-cgcggtctccgggatcgagcaccacgtcttcgtcg	Protospacer
 *.*  ***.************** ********. .

31. spacer 6.38|1084443|35|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

gcac-ctcttcgggatcgagcaccccgtcttcgcga	CRISPR spacer
-cgcggtctccgggatcgagcaccacgtcttcgtcg	Protospacer
 *.*  ***.************** ********. .

32. spacer 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.784

ccctcgagccgggcgcaacggttgccgatgccagaaa	CRISPR spacer
gggtcgagccgggcgcaacgcttgccgatgtcgataa	Protospacer
   ***************** *********.*.. **

33. spacer 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LN831028 (Fusobacterium nucleatum subsp. polymorphum strain NCTC10562 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaacaaaaaattttagagattatgttacgatc	CRISPR spacer
taaaacaaaaaaatttagatattataaaactact	Protospacer
************ ****** *****.  ** *..

34. spacer 9.1|2087914|33|NZ_CP024593|CRISPRCasFinder matches to NZ_CP016459 (Blastomonas sp. RAC04 plasmid pBSY18_3, complete sequence) position: , mismatch: 8, identity: 0.758

tcctccacgatctcggtgtctgatctgcttttt	CRISPR spacer
tgttccgcgatctgggtgtctgatctgcagggt	Protospacer
* .***.****** **************    *

35. spacer 3.4|739763|29|NZ_CP024593|PILER-CR,CRT matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 9, identity: 0.69

tataaaagccactgaaaaatatgtaaaag	CRISPR spacer
agacaaagccacagaaaaatatgtagtta	Protospacer
 .  ******** ************.  .

36. spacer 3.8|739696|30|NZ_CP024593|CRISPRCasFinder matches to MF479730 (Aeromonas phage AS-gz, complete genome) position: , mismatch: 9, identity: 0.7

tttattggtgatgataaacaacttcctcct	CRISPR spacer
cttatgggtgatgatgaacaacttaacgag	Protospacer
.**** *********.********  .   

37. spacer 3.9|739762|30|NZ_CP024593|CRISPRCasFinder matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 9, identity: 0.7

ttataaaagccactgaaaaatatgtaaaag	CRISPR spacer
tagacaaagccacagaaaaatatgtagtta	Protospacer
* .  ******** ************.  .

38. spacer 6.82|1086992|35|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to MN698248 (Pelagibacter phage HTVC202P, complete genome) position: , mismatch: 9, identity: 0.743

atggaaatgctattgcagattgtac-----agatactatt	CRISPR spacer
atggaaatgctattggagatggtactttagaatta-----	Protospacer
*************** **** ****     *. **     

39. spacer 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to AP014148 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S32-C91, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.757

tagttacaaaacataaacaagaaaaaagaattttcat	CRISPR spacer
tagttaaaatacataaacaagaaaaagatatagcaat	Protospacer
****** ** ****************.. **  . **

40. spacer 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to AP014143 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S24-C76, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.757

tagttacaaaacataaacaagaaaaaagaattttcat	CRISPR spacer
tagttaaaatacataaacaagaaaaagatatagcaat	Protospacer
****** ** ****************.. **  . **

41. spacer 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to AP014144 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S25-C77, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.757

tagttacaaaacataaacaagaaaaaagaattttcat	CRISPR spacer
tagttaaaatacataaacaagaaaaagatatagcaat	Protospacer
****** ** ****************.. **  . **

42. spacer 6.87|1087320|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to AP014147 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S30-C164, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.757

tagttacaaaacataaacaagaaaaaagaattttcat	CRISPR spacer
tagttaaaatacataaacaagaaaaagatatagcaat	Protospacer
****** ** ****************.. **  . **

43. spacer 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 9, identity: 0.757

ccctcgagccgggcgcaacggttgccgatgccagaaa	CRISPR spacer
gggtcgagccgggcgcaacgcttgctgatgtcgataa	Protospacer
   ***************** ****.****.*.. **

44. spacer 6.88|1087387|37|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.757

ccctcgagccgggcgcaacggttgccgatgccagaaa	CRISPR spacer
gggtcgagccgggcgcaacgcttgctgatgtcgataa	Protospacer
   ***************** ****.****.*.. **

45. spacer 6.137|1090619|36|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

gacgtgcagctggagatcgaggaaaacaccgccttg	CRISPR spacer
gacgtgaagctggagatcgtggaaaaaggctcgcag	Protospacer
****** ************ ****** . * * . *

46. spacer 6.9|1082531|34|NZ_CP024593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gagcctcgatgcatcccgaggcggaagccagcct	CRISPR spacer
tcccctcggtgcatcccgaggctgaaggccgggc	Protospacer
   *****.************* **** * *  .

47. spacer 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to KJ803031 (Dinoroseobacter phage vBDshPR2C, complete genome) position: , mismatch: 10, identity: 0.706

accaagatgtcaagaagtccatcatgatgattgt	CRISPR spacer
gaaaagatgtgaagcagtccatcatgactgctct	Protospacer
.  ******* *** ************. ..* *

48. spacer 6.98|1088047|34|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 10, identity: 0.706

taaaacaaaaaattttagagattatgttacgatc	CRISPR spacer
caaaacataaaaatttagagattatacaccacta	Protospacer
.****** **** ************..  *. * 

49. spacer 6.48|1085103|34|NZ_CP024593|PILER-CR,CRISPRCasFinder matches to KJ621082 (Dinoroseobacter phage DFL12phi1, complete genome) position: , mismatch: 11, identity: 0.676

accaagatgtcaagaagtccatcatgatgattgt	CRISPR spacer
ggaaagatgtgaagcagtccatcatgactgcact	Protospacer
.  ******* *** ************. ..  *

50. spacer 6.108|1088712|36|NZ_CP024593|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 12, identity: 0.667

tatttaacgacgaggacggcgtgcgcaaggcggagc	CRISPR spacer
cccaccacgacgaggtcggcgtgctcaaggcgcccg	Protospacer
. . . ********* ******** *******    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
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Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP024593.1|WP_039417454.1|167175_167598_+|PcfK-like-protein 167175_167598_+ 140 aa aa 40 NA NA No NA
NZ_CP024593.1|WP_004584358.1|1924588_1925002_+|PcfK-like-protein 1924588_1925002_+ 137 aa aa 40 NA NA No NA
NZ_CP024593.1|WP_099896811.1|2402508_2402925_-|PcfK-like-protein 2402508_2402925_- 138 aa aa 40 NA NA No NA