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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020982 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP020981 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 chromosome, complete genome 3 crisprs DinG,WYL,cas3,DEDDh,csa3 0 8 6 0

Results visualization

1. NZ_CP020981
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020981_1 1761230-1761444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020981_2 3830474-3830574 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020981_3 4058371-4058724 Orphan NA
6 spacers
WYL

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 CP043032 Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence 11531-11564 5 0.853
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NZ_CP054029 Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence 463181-463214 5 0.853
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 25338-25368 5 0.839
NZ_CP020981_3 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder 4058394-4058424 31 NC_009806 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence 119514-119544 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 841349-841379 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 841095-841125 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 741214-741244 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 811280-811310 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 740329-740359 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 742907-742937 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 742896-742926 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 741201-741231 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 741220-741250 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 741198-741228 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 841418-841448 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 841417-841447 6 0.806
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 841402-841432 6 0.806
NZ_CP020981_3 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder 4058394-4058424 31 NZ_CP029834 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence 322116-322146 7 0.774
NZ_CP020981_3 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder 4058394-4058424 31 NC_016624 Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence 23696-23726 7 0.774
NZ_CP020981_3 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder 4058394-4058424 31 NC_013859 Azospirillum sp. B510 plasmid pAB510e, complete sequence 135212-135242 7 0.774
NZ_CP020981_3 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder 4058562-4058592 31 NZ_CP015279 Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence 150331-150361 7 0.774
NZ_CP020981_3 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder 4058562-4058592 31 NZ_CP015280 Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence 81610-81640 7 0.774
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP023000 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence 513842-513872 7 0.774
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP044217 Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence 110715-110745 7 0.774
NZ_CP020981_3 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder 4058394-4058424 31 NC_008384 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence 475100-475130 8 0.742
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1614842-1614875 8 0.765
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NC_015179 Acidiphilium multivorum AIU301 plasmid pACMV3, complete sequence 32207-32240 8 0.765
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 657714-657747 8 0.765
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP028969 Aminobacter sp. MSH1 plasmid pUSP1, complete sequence 120445-120475 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP026266 Aminobacter sp. MSH1 plasmid pAM01, complete sequence 117739-117769 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP021028 Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence 138162-138192 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013503 Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence 134326-134356 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP030761 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence 580143-580173 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013509 Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence 134326-134356 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013520 Rhizobium sp. N113 plasmid pRspN113c, complete sequence 134326-134356 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013493 Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence 134326-134356 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP013516 Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence 134775-134805 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 CP006880 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence 316189-316219 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP050081 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence 486605-486635 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP050104 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence 23917-23947 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP049731 Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence 482003-482033 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP025507 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence 1004464-1004494 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP050109 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence 23917-23947 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP022666 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence 428001-428031 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 2251917-2251947 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 140682-140712 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP053206 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence 483199-483229 8 0.742
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NZ_CP050086 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence 23915-23945 8 0.742
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 NZ_AP012556 Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence 22147-22180 9 0.735
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 NZ_CP023152 Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence 116465-116498 9 0.735
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 367183-367216 9 0.735
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 138043-138076 9 0.735
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NZ_CP030128 Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence 345663-345696 9 0.735
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 AF440695 Virus PhiCh1, complete genome 58189-58222 9 0.735
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NC_004084 Natrialba phage PhiCh1, complete genome 58189-58222 9 0.735
NZ_CP020981_3 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder 4058562-4058592 31 NZ_CP017244 Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence 934481-934511 9 0.71
NZ_CP020981_3 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder 4058616-4058646 31 NZ_CP013739 Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence 114529-114559 9 0.71
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 NC_027204 Sinorhizobium phage phiM12, complete genome 74902-74932 9 0.71
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 KR052482 Sinorhizobium phage phiN3, complete genome 76608-76638 9 0.71
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 KR052481 Sinorhizobium phage phiM19, complete genome 72551-72581 9 0.71
NZ_CP020981_3 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder 4058670-4058700 31 KR052480 Sinorhizobium phage phiM7, complete genome 72291-72321 9 0.71
NZ_CP020981_3 3.9|4058506|39|NZ_CP020981|CRT 4058506-4058544 39 NZ_CP054029 Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence 463182-463220 9 0.769
NZ_CP020981_3 3.14|4058505|40|NZ_CP020981|PILER-CR 4058505-4058544 40 NZ_CP054029 Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence 463181-463220 9 0.775
NZ_CP020981_3 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder 4058505-4058538 34 NZ_CP032520 Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence 486064-486097 10 0.706
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 72444-72477 11 0.676
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 MH271303 Microbacterium phage MementoMori, complete genome 20739-20772 11 0.676
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 MN813682 Microbacterium phage Matzah, complete genome 21015-21048 11 0.676
NZ_CP020981_3 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder 4058448-4058481 34 MK937591 Microbacterium phage Cinna, complete genome 21039-21072 11 0.676

1. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to CP043032 (Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.853

ctccgccactgatctggctgccgcgctcggcgag-	CRISPR spacer
ctccgcctctgatcttgctgccgcg-gcggagagt	Protospacer
******* ******* *********  *** *** 

2. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 5, identity: 0.853

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
gcgggccggacacgatcgccttcaggcccagcga	Protospacer
**  *************.***** ********* 

3. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 5, identity: 0.839

gggcgccataggtcttgccggca---tctgcgct	CRISPR spacer
gggtgccataggttttgccggcagactctgc---	Protospacer
***.*********.*********   *****   

4. spacer 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 6, identity: 0.806

tgcccttgccgagctcggtccccaccagccc	CRISPR spacer
cgacgttgccgagaccggtccccaccagccg	Protospacer
.* * ******** .*************** 

5. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

6. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

7. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

8. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

9. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

10. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

11. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

12. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

13. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

14. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

15. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

16. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

17. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
catcgtaggtttgcgcgccggcaccggtctc	Protospacer
*.*. * *********.*********.****

18. spacer 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.774

tgcccttgccgagctcggtccccaccagccc	CRISPR spacer
ggacgatgccgagcccggtccccgccagcac	Protospacer
 * *  ********.********.***** *

19. spacer 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 7, identity: 0.774

tgcccttgccgagctcggtccccaccagccc	CRISPR spacer
ggacgatgccgagcccggtccccgccagcac	Protospacer
 * *  ********.********.***** *

20. spacer 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 7, identity: 0.774

tgcccttgccgagctcggtccccaccagccc	CRISPR spacer
ggacgatgccgagcccggtccccgccagcac	Protospacer
 * *  ********.********.***** *

21. spacer 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP015279 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.774

cgcccccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
cggcggcggtgcgcgcgttgtcgccggtgat	Protospacer
** *  ****.***************.**  

22. spacer 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP015280 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence) position: , mismatch: 7, identity: 0.774

cgcccccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
cggcggcggtgcgcgcgttgtcgccggtgat	Protospacer
** *  ****.***************.**  

23. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 7, identity: 0.774

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
tgttgttggcttgcgcaccggcacccaatgc	Protospacer
.*** ****.*************** * . *

24. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
tggcgccataggtcttgcctgaatcgtcatt	Protospacer
 ****************** * ***  *..*

25. spacer 3.1|4058394|31|NZ_CP020981|CRISPRCasFinder matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.742

tgcccttgccgagctcggtccccaccagccc	CRISPR spacer
cgcccttgccgagctcggccgccagcgcgct	Protospacer
.*****************.* *** *.  *.

26. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ctccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
ccagccccatgatctggctgccgcgctcgacgaa	Protospacer
*.   **  ********************.***.

27. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NC_015179 (Acidiphilium multivorum AIU301 plasmid pACMV3, complete sequence) position: , mismatch: 8, identity: 0.765

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
tctcgccggactcgatcaccttctcgccctcatt	Protospacer
 *.******** ************ ****    *

28. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 8, identity: 0.765

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
gctttccggacacgatcaatttctggcccatcca	Protospacer
**.. ************* .********** *  

29. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
cggcgcgataggtcttgccgacatagccgga	Protospacer
 ***** *************.***   **  

30. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
cggcgcgataggtcttgccgacatagccgga	Protospacer
 ***** *************.***   **  

31. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

32. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

33. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

34. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

35. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

36. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

37. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

38. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

39. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

40. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

41. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

42. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

43. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

44. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

45. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

46. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

47. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

48. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * * 

49. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 9, identity: 0.735

ctccgc-cactgatctggctgccgcgctcggcgag	CRISPR spacer
-tctacgggctgatcgggctgctgcgctcggcggc	Protospacer
 **..*  .****** ******.**********. 

50. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 9, identity: 0.735

ctccgc-cactgatctggctgccgcgctcggcgag	CRISPR spacer
-tctacgggctgatcgggctgctgcgctcggcggc	Protospacer
 **..*  .****** ******.**********. 

51. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
actgtccggacacgaccaccttctggcccgcttt	Protospacer
.*.  **********.*************. . *

52. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 9, identity: 0.735

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
acacgctggccacgatcaccttctggctgatggg	Protospacer
.* ***.** *****************. *  * 

53. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP030128 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
acaggctggacacggtcaccttctggccgcgcaa	Protospacer
.*  **.*******.*************  **. 

54. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to AF440695 (Virus PhiCh1, complete genome) position: , mismatch: 9, identity: 0.735

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
cccttcgcgacacgatcaccgtctgccccagctg	Protospacer
 **. *  ************ **** ******  

55. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NC_004084 (Natrialba phage PhiCh1, complete genome) position: , mismatch: 9, identity: 0.735

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
cccttcgcgacacgatcaccgtctgccccagctg	Protospacer
 **. *  ************ **** ******  

56. spacer 3.4|4058562|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.71

cgcccccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
gcaagatggtgcgcgcgttgtcgccgctgcg	Protospacer
      .***.*************** ****

57. spacer 3.5|4058616|31|NZ_CP020981|CRISPRCasFinder matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 9, identity: 0.71

cgttcttggtttgcgcaccggcaccgatctc	CRISPR spacer
ccccagaggtatgcgcaccggcaccgctctg	Protospacer
* ..   *** *************** *** 

58. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to NC_027204 (Sinorhizobium phage phiM12, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

59. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to KR052482 (Sinorhizobium phage phiN3, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

60. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to KR052481 (Sinorhizobium phage phiM19, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

61. spacer 3.6|4058670|31|NZ_CP020981|CRISPRCasFinder matches to KR052480 (Sinorhizobium phage phiM7, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

62. spacer 3.9|4058506|39|NZ_CP020981|CRT matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 9, identity: 0.769

cccgccggacacgatcaccttctggcccagcgtgatcga	CRISPR spacer
cgggccggacacgatcgccttcaggcccagcgagcgctg	Protospacer
*  *************.***** ********* *  * .

63. spacer 3.14|4058505|40|NZ_CP020981|PILER-CR matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 9, identity: 0.775

gcccgccggacacgatcaccttctggcccagcgtgatcga	CRISPR spacer
gcgggccggacacgatcgccttcaggcccagcgagcgctg	Protospacer
**  *************.***** ********* *  * .

64. spacer 3.3|4058505|34|NZ_CP020981|CRISPRCasFinder matches to NZ_CP032520 (Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gcccgccggacacgatcaccttctggcccagcgt	CRISPR spacer
actgtccggacacgaccaccatctggcccgcttt	Protospacer
.*.  **********.**** ********. . *

65. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 11, identity: 0.676

ctccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
gatggaggaggatctggccgccgcgctcgccgag	Protospacer
  . *  .  ********.********** ****

66. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to MH271303 (Microbacterium phage MementoMori, complete genome) position: , mismatch: 11, identity: 0.676

ctccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 .  *  .  **** ** ****************

67. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to MN813682 (Microbacterium phage Matzah, complete genome) position: , mismatch: 11, identity: 0.676

ctccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 .  *  .  **** ** ****************

68. spacer 3.2|4058448|34|NZ_CP020981|CRISPRCasFinder matches to MK937591 (Microbacterium phage Cinna, complete genome) position: , mismatch: 11, identity: 0.676

ctccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 .  *  .  **** ** ****************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1262450 : 1270345 17 Stx2-converting_phage(16.67%) terminase NA
DBSCAN-SWA_2 1991043 : 2000181 7 Shigella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_3 2352733 : 2373303 32 Pseudomonas_phage(47.06%) NA NA
DBSCAN-SWA_4 2817426 : 2867651 55 Stenotrophomonas_phage(51.43%) holin,transposase,protease,integrase,capsid,portal,plate,tail,terminase attL 2853282:2853299|attR 2869776:2869793
DBSCAN-SWA_5 4063397 : 4128849 57 Bacillus_phage(25.0%) tail,tRNA,protease NA
DBSCAN-SWA_6 5018939 : 5026966 7 Enterobacteria_phage(42.86%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage