CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024728	Prevotella intermedia strain KCOM 1949 chromosome 2, complete sequence	1 crisprs	DEDDh,Csx28,cas13b,PD-DExK	0	3	2	2
NZ_CP024727	Prevotella intermedia strain KCOM 1949 chromosome 1, complete sequence	1 crisprs	cas2,cas9,cas3,DEDDh,RT	0	8	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024728_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024728_1

262780-263210

TypeVI-B1,TypeVI-B2

VI-B2

Consensus_repeat	Method
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	CRISPRCasFinder
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	CRT

6 spacers

Csx28,cas13b

The CRISPR arrays of NZ_CP024728_1

>merge|NZ_CP024728|1|262780-263210|CRISPRCasFinder,CRT
GTTGTTTGTGCCTTGCAAAGAGCAGGTAGATGCAACTTAACATTATCAAAATGAAACAAAAAGAATGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGTGCTGCCATTTCAGGGGCTAACAATGATTGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACCATTTGGGAAAAGGCACAGCCTGAATTGTTGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTCGTATGAATGGTATAGCAGTAATTGATAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACACCCTTAAATAATGATAAGGGTTTCTAAAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGTGAGAACCCAAACGAAATTTATATAGAGAGTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

>NZ_CP024728|1|1|262780-263210|CRISPRCasFinder
GTTGTTTGTGCCTTGCAAAGAGCAGGTAGATGCAAC	TTAACATTATCAAAATGAAACAAAAAGAAT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GTGCTGCCATTTCAGGGGCTAACAATGATT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	CATTTGGGAAAAGGCACAGCCTGAATTGTT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTCGTATGAATGGTATAGCAGTAATTGATA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	ACCCTTAAATAATGATAAGGGTTTCTAAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GTGAGAACCCAAACGAAATTTATATAGAGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

>NZ_CP024728|1|1|262780-263210|CRT
GTTGTTTGTGCCTTGCAAAGAGCAGGTAGATGCAAC	TTAACATTATCAAAATGAAACAAAAAGAAT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GTGCTGCCATTTCAGGGGCTAACAATGATT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	CATTTGGGAAAAGGCACAGCCTGAATTGTT
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	TTCGTATGAATGGTATAGCAGTAATTGATA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	ACCCTTAAATAATGATAAGGGTTTCTAAA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	GTGAGAACCCAAACGAAATTTATATAGAGA
GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024728.1\|WP_172952369.1\|267569_268409_-\|DUF481-domain-containing-protein	unknown	unknown	unknown
NZ_CP024728.1\|WP_100015012.1\|282940_283405_-\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP024728.1\|WP_157765012.1\|262290_262512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024728.1\|WP_100014741.1\|276291_278433_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_CP024728.1\|WP_100014729.1\|250323_252612_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP024728.1\|WP_172952362.1\|263843_267290_-\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NZ_CP024728.1\|WP_100014742.1\|279460_281707_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP024728.1\|WP_100014731.1\|253489_255688_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP024728.1\|WP_100014737.1\|263278_263839_-\|hypothetical-protein	Csx28	-	unknown
NZ_CP024728.1\|WP_100014744.1\|283920_284388_-\|virulence-RhuM-family-protein	unknown	unknown	gnl\|CDD\|226452
NZ_CP024728.1\|WP_100014726.1\|244357_246313_+\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
NZ_CP024728.1\|WP_100014733.1\|257559_257904_-\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917
NZ_CP024728.1\|WP_097551295.1\|268639_269056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024728.1\|WP_100014730.1\|252748_253366_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP024728.1\|WP_100014740.1\|275283_276279_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024728.1\|WP_100015011.1\|246406_246916_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024728.1\|WP_100014732.1\|255840_257358_+\|DUF4301-family-protein	unknown	unknown	gnl\|CDD\|372920
NZ_CP024728.1\|WP_100014735.1\|258942_261963_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP024728.1\|WP_100014743.1\|281942_282734_+\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_CP024728.1\|WP_100356209.1\|247683_249717_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024728.1\|WP_100014729.1\|250323_252612_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP024728.1\|WP_172952362.1\|263843_267290_-\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
NZ_CP024728.1\|WP_100014742.1\|279460_281707_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP024728.1\|WP_100014731.1\|253489_255688_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP024728.1\|WP_100015012.1\|282940_283405_-\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	4.34922e-71
NZ_CP024728.1\|WP_100014744.1\|283920_284388_-\|virulence-RhuM-family-protein	gnl\|CDD\|226452	COG3943, COG3943, Virulence protein [General function prediction only].	2.06639e-41
NZ_CP024728.1\|WP_100014726.1\|244357_246313_+\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NZ_CP024728.1\|WP_100014733.1\|257559_257904_-\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	1.64124e-11
NZ_CP024728.1\|WP_100014732.1\|255840_257358_+\|DUF4301-family-protein	gnl\|CDD\|372920	pfam14134, DUF4301, Domain of unknown function (DUF4301). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 505 and 516 amino acids in length.	0
NZ_CP024728.1\|WP_100014741.1\|276291_278433_-\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	6.01191e-08
NZ_CP024728.1\|WP_100014743.1\|281942_282734_+\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	1.07574e-115
NZ_CP024728.1\|WP_100014735.1\|258942_261963_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.26177e-05
NZ_CP024728.1\|WP_100014730.1\|252748_253366_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.19161e-11

>NZ_CP024728.1|WP_157765012.1|262290_262512_+|hypothetical-protein
MRKHLILLCTAAFLSSLHINRNQPNRTSHRIEPMQKPQPPLPMSHYRQTAIVLPSEATPQPLHLPRRKTTPVL
>NZ_CP024728.1|WP_100014735.1|258942_261963_+|T9SS-type-A-sorting-domain-containing-protein
MKKHYLLVLFLFFFCGMQADEVKVLEENTFSLAISPNGKYLVGYNPTKVKSGVGTESFLYDVGSGSLKWVTTDDPEHWKTCGLFKDVNDAGTLCGSVKDLDHVIDFYGTSAPTNIAAILENGKVVKLPYGDLDMKKIKQHEDGTFAAALSNDGKVVVGYCKCSNFAFSYPCKWTRGANNEWKMEQLPLPESYKYGLAINVSSDGRTIVGLAIEGGRAIACYWIDGKCYTVNCKSEDAELAKMKQMRMIDMSPNGKYFIFSLSSRSDYRLFDVEKGTYRVLPTFERNETMRIPTVADNGDVFGAITYSTAGMGEVSYRSFWYQYSSDRIFDFTYYLYLFNPQLTIPFPLNYEDQAQAFPSAVSANGNVVTGNRDTNIAFGQIPKAWVLNVTKRDVEIPATPNKPNGGSTGLHQVQLSWKIDKATYNSLTLKGYNVYCDGKKIATLNELKDEMMFALKDVYAGYRKFAIEAIYTDKQGKEMLSPRSNPTVIAVPDDYSFPLFEDFEKSSLNANYWTKSKDYGDDADTEWLIAAQVGHDASMGLSTGACTFQPYSSSVISRPLDATKINKVKCSFLILCNQEPAQGGGEVDLTKDTLSVEYTVDGGKSWSVAKEWTVKELPNLEGILTVDLTKHVAGKVFQVRFRKHGKGAVSYYFYLDNIMIGSGDNVDAPKGFTGKVMNNELFLMWKNSRNGYSLNYLSDPESPGYTLGNEGKELIGANKFMQGELAPYHGKYLTSVTSYINYYDDASGEKGIHAAVVVFEDGKLICEQEIENIKYNENTTQKLNQPIKIDSGKELIVGIKIHDYDAEQIPLTYESSKSSVTGKSDLYSEDNGKTWKTVRDFYEDDPQMGSCCWRITGNITDQPNDAVAEEDNTLIGYNVFRNGVQLNNVCIPFEVTRYIDKQPIDKAEYTVVAYYNDGRESFASTPYILDLTNGIAPLVNKSVLSVDKSAIRLNAEGTLRLYSVDGHFVAKSAKGIIPLGNISSGIYIVLVEYNNQRFTQKILINK
>NZ_CP024728.1|WP_100014733.1|257559_257904_-|KilA-N-domain-containing-protein
MVKINVQNTAVNIVRHNDEDYISLTDMARSQMQEHIIFRWLSLKGTIEYLGEWEMLYNPDFNCTEFGIIRDAAGSNNFVLSVKTWIEHTHAISIYSKAGRYGGTYAHRDIAYHF
>NZ_CP024728.1|WP_100014732.1|255840_257358_+|DUF4301-family-protein
MLTKQDELLLNSKGIAISDFEKQLADFKNGFPFLKIESAATVGNGVVRLKENEVKEFTTAWDSYKAEKHKVVKFVPASGAASRMFKDLFAFLEAAYEMPTTDFEKFFFDNLKHFAFYNELNEKCKATHGKDIAQLVEAGSHKAIVATLLHTDGLNYGQLPKGLLLFHKYAEGERTAMEEHLVEAAQYASCGAEAHVHFTVSHEHLELFKAKAAQKQPMYEENHCTRFSITFSEQKPSTDTVGANPDNTPFRNDDGSLLFRPGGHGALIQNLNDIDADVVFIKNIDNVTPDRLKPETVTWKKVIAGVLVTLQEKTFEYVRKLKAADYTPADLQCMKNFLENDLHCRRKDIDQLNNDELAAYLLEKFNRPMRVCGMVRNSGEPGGGPFYAYNADNTVSLQILESSQIDSNDAESVRMFKEGTHFNPVDLVCATKDYAGKPFDLPQFVDPATGFISSKSKNGKELKALELPGLWNGAMSNWNTVFVEVPAITFNPVKTVNDLLREQHQ
>NZ_CP024728.1|WP_100014731.1|253489_255688_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MIFTDDELKSFHALTEELNEELANDVTEQDKEKLASYIKLMEEKGAMERNVFGLSELLCAMQTSLIAVRNIGLKRDSVLATVLYAGFENGALEIKQIEIDFGRSVAQIIQGLARIQNLYKKNPIIESENFRNLLLSFAEDMRVILIMIADRVNLMRQIRDTDNKEAQRQVAEEANYLYAPLAHKLGLYQLKSELEDLSLKYLEHDAYYHIKEKLNETKKARDAYIKEFIEPVSKELQNAGLRFHIKGRTKSIHSIWQKMKKQKCAFEGIYDLFAIRIILDSPTQKEKMQCWQAYSIVTDMYQPNPKRLRDWISVPKSNGYECLHITVLGPNTKWVEVQIRTERMDEVAEHGLAAHWRYKGIQAEEGMDTWLASIRTALEAGDNLEVMTQFKRDLYDKEIYVFTPKGDLLKFPKGATLLDFAYHIHSKIGNQCVGGKINGKNASIRTELHSGDTVEVTTSATQKPKQEWLNIAKSARAKSKIRLALKETQVKEGVYAKEMLERRFKNKKIEIEEQTLFHLIKHLGFKEITEFYKQIADEKLDVNNVIETYQQLYNQTHNQNTQKETESAEKFELADETAELLKNNEDVLVIDQNLKGIDFSLSKCCNPIYGDPIFGFVTVNGGIKIHREDCPNAPELRKRFGYRVVKAKWSGKGGANYSITLRIIGHDDIGIVNNITNVLSKEEKVVMRSINIDSHDGLFSGNLVVLIEDTSKLNALIKKLKNIRGVKQITRL
>NZ_CP024728.1|WP_100014730.1|252748_253366_+|TetR/AcrR-family-transcriptional-regulator
MVIENDYKKEVKAKILQLATTMFFQYGIRKVKMDDIAARLKISKRTLYEIYQNKEDLLYEVVVLNDKRGLEKLEEFDKPGTNVINIIIHVFKLQTEEFSRINPVFLEDIGKYPKLMEYIQNKRKRKRKQVVAFIERGISEGCFLPDINIEIMNTLADASGHYIMSNNLYNKYNIKEIFRTIVLLYIRGICTEKGIRLLDEEMKGF
>NZ_CP024728.1|WP_100014729.1|250323_252612_-|NADP-dependent-malic-enzyme
MVKITKEAALEYHQNGRPGKIEVIPTKSYSTQTDLSLAYSPGVAYPCLEIQENPDNAYKYTDKGNLVAVITNGTAVLGLGNIGAMSGKPVMEGKGLLFKIYGGIDVFDIEIDETDPDKFCEAVEKIAPTFGGINLEDIKAPECFAIEERLKRTLDIPVMHDDQHGTAIISAAGLKNALEVAGKDIAKVQLVVNGAGAAAISCTKLYMALGLKKENILMLDSHGVITTDRPNLTEQKKLFATDRKDVHTLEEAMKGADVFVGLSKGNILSKEMIQSMNDNPIVFALANPVPEISYEDAMAARPDVLIATGRSDYPNQINNVIGFPYIFRGALDVHAKAINEEMKLAAVHAIAELAKQPVPDIVNEVYHVNDLTFGQKYFIPKPVDPRLITVVSAAVAKAAIDSGVARRQIEDFEAYKDKLMQLLGQETKFTRYLHATAAQHPQRVVFAEGVHQNMLKAAVQAKQEGICQPILLGHPDRIKRVANRLKLDLTGIELIDMRADKEQGRRATYAKHLAEKRAREGYTFDEAYDKMYERNYFGMSMVENGDADAMITGPYTKYSDTIKMAKDVIGIRPEYKHFGTMHILNTKRGIYYIADTLINRMPNTETLVDITRLAHHSVKFFNDNPVMAMVSFSNFGSDEGGSPQQVREALAMTQEAHPDWLIDGEMQINFALDKKLRDEKYPFTRLKGKDVNTLIFPNLASANSAYKLLQGFSPETEVIGPIQMGLNKPIHFTDFECSVRDIVNITAVAAIDAYIEKIKNKL
>NZ_CP024728.1|WP_100356209.1|247683_249717_+|hypothetical-protein
MMTNLLRNSYATLVALFIAMFALPTTAQAQIEYNLAVGGKVVTSDNCNDLSEIDGVSGTVNYEPKTKTLTLQDATIEGDIMYAISSDIYGLKIKVVGTNKITAQAYGIIFSRPTSIIGDGTLEIVASDESGINTSGNTLTVEGCTLNVKGGKFGIRGYDGNHGEDITVKNAKITAEGTSEGSIGNIASLAMEGCAIIEPVGAAFDESLHGVALNGALVKEKVVIAPASAPVTEYELIIAGTKVNDKNCSNLSEIEGVKGTVKYDPETKTLTLEDATINIEKENAIYSVIDGLTLKVVGNNTLKGTNTAIGFQKPMTITGGGTLDVESTKETAIYAVGTTLVIEDCTINAKGLDCGISGNDGENGEQLTIKNAKVTAEGKEGGSVCDFVTLTMEGCVITEPVGAAFNESLHGVALNGALVKDKVVIGPAPAPITEYELMIAGIKVNEKNCGNLSEIEGVDGTVKYDDETKTLTLENATINVGEKNAIFSVIDGLTLKVVGNNTLKGSEAAIVFSKPMAITGGGTLNVESTKQTAINAIGTALTIEDCTVNAKGLDCGISGNSGKDEEKLTVKKATVSAEGTNVGSICNLAMLTMEGCAITEPVGAEFDESLKGVALNGALVKGKVVITNGATAIGSLTTDTATVKQGIYTLSGVRLSVELNKLPKGVYIVNGKKVVKQ
>NZ_CP024728.1|WP_100015011.1|246406_246916_+|hypothetical-protein
MKRILFTFLLLLIAILGKAQYGNYVQLTAVELLQYQLQKTRKQLATPPFRRYGLRRIRASKYLDDSDPRHIWGWHLQPNEQYEASEPLYKLFQKGDLSSLGIIDTQGAGIEVVFWDKTYYRRFSQQLRNIGFTLSNSPAATNVLQFRKPDTTVRVDVTIWSDIYILKIE
>NZ_CP024728.1|WP_100014726.1|244357_246313_+|NAD(+)-synthase
MKYGFIKVATAIPEVRIADTKFNLEAIEKQIVMAEGQGVEIIVFPEFCITGYTCQDLFRQQLLLDDSEHAMMMLLDFTRQLDIIAIVGIPVCVGPLLLNCAAVVQHGKIIGIVPKTYLPNYAEFYEKRWFASARDLCPTQIHYAGQTVLVTPARQIFRTADGVKFGIEICEDIWAPIPPSNALTLAGVEIMFNLSASTEQIGKHRYLEALLAQQSARTISAYVYSSCGFGESSQDVVFGGNAFIYENGTQIAEAERFSLDPQLIVGEIDVEKLRSERRSNTTFANAQKDMYVDPIGGVLPEKTYVNCLPKENTEREFTLTRKINPQPFIQSEDMEAACEEVFNIQVTGLARRLLHTNCKTIVIGVSGGLDSTLALLVCVRAFDKLKFDRKGIIGVTMPGFGTSERTHKNAIALMEELGVEIKEISIEPSVVQHLKDIGHDIDVHDSTYENAQARERTQILMDLSNKYGGMVIGTGDLSELALGWCTYNGDHMSMYAVNGSVPKTLVRHLVTYVADLSDNAKVAEALHDIVATPISPELTPADEKGEIQQKTEDIVGPYELHDFFLYYFLRHGFHPSKIYYLAGKAFEGKYTGEEIKKWLYTFVSRFFKHQFKRSCLPDGPKVGTVSLSPRGDWRMPSDANSTNWLAEIEQL
>NZ_CP024728.1|WP_100014737.1|263278_263839_-|hypothetical-protein
MDCTLISKEVATALFSTISSLIPIVIAAYLTYRYAIKKLRKESFENIERAKYEAILKAHQSIYKLLRFITDTENDDCIMVWEQPKGGGEKTYYFRQANIRKFIKELTEEIYNKGNGIFLSKKVMPLIFEYRSLVYGLLLTAKDKPDETIEIKNEKLAKRMIEIHQSLSIQIRKDINLKQRDLQFDS
>NZ_CP024728.1|WP_172952362.1|263843_267290_-|hypothetical-protein
MEDDKKTTESTNMLDNKHFWAAFLNLARHNVYITVNHINKVLELKNKKDQDIIIDNDQDILAIKTHWEKVNGDLNKTERLRELMTKHFPFLETAIYTKNKEDKKEVKQEKQAKAQSFDSLKHCLFLFLEKLQEARNYYSHYKYSESTKEPMLEKELLKKMYNIFDDNIQLVIKDYQHNKDINPDEDFKHLDRTEEDFNYYFTRNKKGNITASGLLFFVSLFLEKKDAIWMQQKLRGFKDNRESKKKMTHEVFCRRRMLLPKLRLESTQTQDWILLDMLNELIRCPKSLYERLQGDDRKKFNVPFDPADENYDAEQEPFKNTLVRHQDRFPYFALRYFDYNEIFANLRFQIDLGTYHFSIYKKLIGGQKEDRHLTHKLYGFERIQEFAKQNRTDEWKAIVKDLDTYETSNERYISETTPHYHLENQKIGIRFRNDNDEIWPSLKTNGENNEKRKYKLDKQYQAEAFLSVHELLPMMFYYLLLKMENTDNGKENNEVGTKKKRNKNNEQEKHKIEEIIENKIKDIYALYDAFANGEINSEEELKEYLKGKDIEIVHLPKQMVAILYDEHKDMVEEAKRKQKEMVKDTKKLLATLEKQTQGEIEDGGRNIRLLKSGEIARWLVNDMMRFQPVQKDNEGNPLNNSKANSTEYQMLQRSLALYNKEEKPTRYFRQVNLINSSNPHPFLKWTKWEECNNILSFYRSYLTKKIEFLNKLKPEDWEKNQYFLKLKEPKINRETLVQGWKNGFNLPRGIFTEPIREWFKRHQNDSKEYENVEALDRVGLVTKVIPLFFKEEDFKDKEEYLKKDAQKEINNCVQPFYSLPYNVGNIHKPDEKDFLPSEERKKLWGDKKYKFKGYKAKVKSKKLTDKEKEEYRSYLEFQSWNKFERELRLVRNQDIVTWLLCTELIDKLKVEGLNVEELQKLRLKDIDTDTAKQEKNNILNRVMPMQLPVTVYEIDDSHNIVKDRPLHTVYIEETKTKLLKQGNFKALVKDRRLNGLFSFVDTSSETELKSKPISKSVVEYELGEYQNARIEIIEDMLALEETLIEKDKNLPTNNFSDMLNGWLEGKDESDKARFQNDVKLLVAVRNAFSHNQYPMRNRIAFANINPFSLSSADTSEEKGLDIANQLKDKTHKIIKRIIKIEKPIETKE
>NZ_CP024728.1|WP_172952369.1|267569_268409_-|DUF481-domain-containing-protein
MLFRLLALLFQRTHKKSACVKRCAYVLLCIVASLPAQAQMLFSENLTMSIDSAKTIQGSLQPVVDFKTEKENVLTLKNTANLNLLIKRNRVVNLINKLEFSTYGKKITVSGGYVHAEYRYLLQHAFEIYPYVESQWAGSRGMTFKVSTGLQSRYRLVNTEHSLMFAAIGLFYEFEKWEYPDPPADTTPHAYSRSVKSHLSLSYRLSLGEHWEITTTAIHQAKPDSYFKSARFGGAVDLAYRITPKIGVRGTYRLIYDTAPIVPIRKNYTAVDAGLDISF
>NZ_CP024728.1|WP_097551295.1|268639_269056_+|hypothetical-protein
MKRLFLIGIMALAAVSGFAQDVNRVDKLKEQQKVLDLTSKLNKLQLDLEKEKATYNDLVNKASEVNAEANVVTTEFNSSDAKSTVKDAKETIKVLKEAKAVNKKLKNAQKKTSKIEKKIAKLQARIDDLNKRIKFVDQ
>NZ_CP024728.1|WP_100014740.1|275283_276279_-|hypothetical-protein
MWYLEKPSEKDLNTYKELFYEKIKNKIDKDGCFKFLLEEDNIERLLISEPKELYELNNKLMTEFIEDYSVDELKEYQKAKEKKVKKETSLKNKYNKLKEIQTIFNYNTLVSGNKDNSYKIAEIKGRNTCTYCNRQYTITLKKDGEFITRPQFDHWFPKSIFPLLALSFYNLIPSCSICNSSAKGEQIFSFKKLIHPYKRSSPETDFRFSYLPDGKGGWKIDLYNLKGVEKETFEVFKLKDIYNYHYKLEAKDLLDLAIKNNGTYIEWLLNNMEKKEIVPSYKEAYRLLFGTEYDIKKVLDRPFSKLKRDLLIAISELNPNIAILEYLNKEK
>NZ_CP024728.1|WP_100014741.1|276291_278433_-|AAA-family-ATPase
MENKTKNSQSNTISATETTNFQLIAIKVNKDRTIGQRKLTANKPYFFSEGYEITNNVLTIKEENKISSNIYNLFLKDKEGQQPSISINAIVGENGSGKSTIVEYVIRLINNLSAAIFGEKFSNPAAEHLHYIEGMDGELWYLVDNKAVRLVVNDKKVDLFSYTKDTQEEKFGNETLLLSNEKTDKDSPMENLNPEKLKEFIPSLFYTLVSNYSIYAYNAVDYLDENNSIKLESEIRGKVTNAKYECNWLSGIFHKNDGYQSPIVLTPYREEGNININTEKQLSKERLISLLLMDSKYYRTINGHLKVTDLKITKNEENKDKNTLKKEELYHLTENGFKNIKKRIIELWIEKIGISKEEIENNNYKEEISTYIAYKTLKIASRYKQYSNKFYTKQHQRMYSRFDEGLLKELIGKMCNDTSHITKKIRQCFLYLLYNPFKLKSEGESIIKIDEAEKRVKKGLTNSDSLRNNPFFKNISIEDLLPPPIFSIEIILKDKLNSDNVPFNTLSSGERQQAFSISSALYHLANIESVHNDKNNVRVCYSNALIIFEEVELYFHPQLQKQLIKNLLDGIKQMHFKHIKSIQIIFVTHSPFILSDIPTENILALKKDCTETKELKTFSANIYDILNTSFFMEEGAIGDYAQWIIQFIVKCFEDRQSISPKDLLELISLIDEPLYHKVLMQRFYKKYPNQTPLSKKIEELEMQLDALKKQQNK
>NZ_CP024728.1|WP_100014742.1|279460_281707_+|formate-C-acetyltransferase
MREEWRGFSGTKWLDEVNMREFIQANYTGYDGDAEFLADPTEATNKLWGKLKELQKEERTKGGVLDMETEIVSSATAYGAGYIDESLKDLEKVVGLQTDKPLKRAFMPYGGIKMAEQACTTYGYQPSEKLHEIFTKYCKTHNEGVFDAYTDEMKIVRHNHILTGLPDTYGRGRIVGDYRRVALYGVDFLIEEKQKDLRNCGDGVMVDDIIRLREEISMQIKALYEMKEMAKIYGYDISKPANNAREAVQWLYFGYLSAIKTQNGAAMSVGRISTFLDIYINRDFQEGTLTEAEAQELIDHIVMKFRMVKFARIPSYNQLFSGDPVWATLEVAGLGMDGRHMVTKNDFRFLHTLENMGPSPEPNLTVLYSPALPEGFKKYAAKISVKTSSIQYENDEVMRPVWGDDYSICCCVSATQTGKEMQFFGARANLAKCLTYAISGGVDHKTREQCGPALRPIEGDVVTYEEFMPKFMDMMEWLADIYVNTLNLIHYMHDKYFYEAAELALIDTDVRRTFATGIAGFSHVVDSICAIKYAKVKIVRDETGFPLDFETEGEFPRYGNDDERADEIAVWLLKTFMTMIRKHHTYRNSEPTTSILTITSNVVYGKYTPAMPDGRPSGAPLAPGANPSYGAEQNGLLASLNSVAKLPYEYALDGISNTQTIAPSTLGKDDEERTNTLVGVMDGYFSRGAHHLNVNVFGVEKLIDAMEHPEKEEYANFTIRVSGYAVKFIDLTREQQEDVIARQAHGKM
>NZ_CP024728.1|WP_100014743.1|281942_282734_+|pyruvate-formate-lyase-activating-protein
MTEQIPTIEYNTENTERADGKKLARVHSIESFGSVDGPGIRFIVFLKGCTMRCQYCHNPDTWDTHSDQLMTADELLAKAIRFKSYWGANGGITVSGGESLLQMDFLIEFFRKAKVQGVHTCLDTSAQPFRRTGAFFEKFEELMQYTDLLLFDIKHIDTDEHKKLTGWGNENILDCARYLSEIGKPIWIRHVLVPTITDKDEYLLRLRDFIASLTNVEKIEVLPYHTLGIYKWENLNMPYTLKGIPEPTPEQVQHAQQILEGKA
>NZ_CP024728.1|WP_100015012.1|282940_283405_-|MaoC-family-dehydratase
MEKLIVNNYEELASYLGKKLGESEWLEVNQERINLFADATLDHQWIHVDAERAAKESAYKTTIAHGYLTLSLLPYMWNQTIEVHNLKMMVNYGMDKMRFGRPVLVDSRIRLVSWLESIENLRGICKAGIKFQIEIEGERKPALEGVATFLYYFE
>NZ_CP024728.1|WP_100014744.1|283920_284388_-|virulence-RhuM-family-protein
MEEKNKIIIYTDESGSTKLDVRLEDETLWLTQAQLCSLYKTSKSNVSEHIKHIFEEDELQEDSVVRKFRTAAADGKMYLTTFYNLDMIIALGYRVRSIIATRFRQWATQRLKEYITKGFTIDDDRLKEVGGGSYWEGINIPKSGIVPYVYMLIKV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP034229	Lactobacillus agilis strain La3 plasmid pLa3_4, complete sequence	2267-2296	5	0.833
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	KJ018209	Shewanella sp. phage 1/4, complete genome	20888-20917	6	0.8
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NC_031032	Bacillus phage Stitch, complete genome	23667-23696	6	0.8
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	MT774398	CrAssphage cr60_1, complete genome	16462-16491	6	0.8
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NC_049964	Bacillus phage KonjoTrouble, complete genome	25571-25600	6	0.8
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	MN082624	Bacillus phage VioletteMad, complete genome	25571-25600	6	0.8
NZ_CP024728_1	1.3\|262948\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262948-262977	30	MN694538	Marine virus AFVG_250M546, complete genome	17859-17888	6	0.8
NZ_CP024728_1	1.5\|263080\|29\|NZ_CP024728\|CRISPRCasFinder,CRT	263080-263108	29	NZ_CP053316	Bacillus circulans strain GN03 plasmid unnamed, complete sequence	60851-60879	6	0.793
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	KT264791	Gokushovirus WZ-2015a isolate 43Fra07, complete genome	4131-4160	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	MT774397	CrAssphage cr56_1, complete genome	3094-3123	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	151208-151237	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	161924-161953	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP017672	Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence	78489-78518	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	CP002963	Emticicia oligotrophica DSM 17448 plasmid pEMTOL02, complete sequence	14358-14387	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP007453	Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence	468497-468526	7	0.767
NZ_CP024728_1	1.3\|262948\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262948-262977	30	NZ_CP014688	Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence	413355-413384	7	0.767
NZ_CP024728_1	1.3\|262948\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262948-262977	30	MH616856	Microviridae sp. isolate ctcg971, complete genome	888-917	7	0.767
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	526692-526721	8	0.733
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NC_023917	Clostridium perfringens plasmid pCP-OS1 DNA, complete sequence, strain: OS1	20585-20614	8	0.733
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	NC_023918	Clostridium perfringens plasmid pCP-TS1 DNA, complete sequence, strain: TS1	20567-20596	8	0.733
NZ_CP024728_1	1.3\|262948\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262948-262977	30	MN694413	Marine virus AFVG_250M994, complete genome	5198-5227	8	0.733
NZ_CP024728_1	1.1\|262816\|30\|NZ_CP024728\|CRISPRCasFinder,CRT	262816-262845	30	MG592462	Vibrio phage 1.087.A._10N.261.45.F9, partial genome	33491-33520	9	0.7

1. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP034229 (Lactobacillus agilis strain La3 plasmid pLa3_4, complete sequence) position: , mismatch: 5, identity: 0.833

-ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
ttcagcgtt-tcaaaatgaaacaaaaaaaat	Protospacer
 *.*.*.** *****************.***

2. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to KJ018209 (Shewanella sp. phage 1/4, complete genome) position: , mismatch: 6, identity: 0.8

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
ttaacattatctaaatgaaagaaagatttt	Protospacer
*********** ******** ***.*   *

3. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NC_031032 (Bacillus phage Stitch, complete genome) position: , mismatch: 6, identity: 0.8

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaaacttatcaaaataaaacaacaagaat	Protospacer
  **  **********.****** ******

4. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MT774398 (CrAssphage cr60_1, complete genome) position: , mismatch: 6, identity: 0.8

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaacattatcaaaatggaaaaaaaaagat	Protospacer
  ***************.** *****..**

5. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NC_049964 (Bacillus phage KonjoTrouble, complete genome) position: , mismatch: 6, identity: 0.8

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaaacttatcaaaatcaaacaacaagaat	Protospacer
  **  ********** ****** ******

6. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MN082624 (Bacillus phage VioletteMad, complete genome) position: , mismatch: 6, identity: 0.8

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaaacttatcaaaatcaaacaacaagaat	Protospacer
  **  ********** ****** ******

7. spacer 1.3|262948|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MN694538 (Marine virus AFVG_250M546, complete genome) position: , mismatch: 6, identity: 0.8

catttgggaaaaggcacagcct-gaattgtt	CRISPR spacer
agtttgggaaaaggtacagcctcaaattga-	Protospacer
 .************.******* .*****

8. spacer 1.5|263080|29|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP053316 (Bacillus circulans strain GN03 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

acccttaaataatgataagggtttctaaa	CRISPR spacer
attcctaaataatgagaagagtttctaat	Protospacer
*..*.********** ***.********

9. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to KT264791 (Gokushovirus WZ-2015a isolate 43Fra07, complete genome) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
gagaggtgctcaaaatgaaacaaaaagaat	Protospacer
  .* .*  *********************

10. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MT774397 (CrAssphage cr56_1, complete genome) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaacattatcaaaatgaaaaagaaaagtt	Protospacer
  ****************** *.***.. *

11. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
caaaaattatcaaaatgaaagaaaaaagaa	Protospacer
. ** *************** *****..*

12. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
caaaaattatcaaaatgaaagaaaaaagaa	Protospacer
. ** *************** *****..*

13. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP017672 (Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
taaaaggagtcaaaatgaaagaaaaagaat	Protospacer
* ** .  .*********** *********

14. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to CP002963 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL02, complete sequence) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaactaaatcaaaatgacacaaaaagaac	Protospacer
  ***   ********** **********.

15. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP007453 (Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence) position: , mismatch: 7, identity: 0.767

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aaaaatctatcaaaatgacacaaaaataat	Protospacer
  **  .*********** ******* ***

16. spacer 1.3|262948|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP014688 (Acetobacter persici strain TMW2.1084 plasmid pAC1084_1, complete sequence) position: , mismatch: 7, identity: 0.767

catttgggaaaaggcacagcctgaattgtt	CRISPR spacer
ctggcgggaaaaggcacaacctgaagtgta	Protospacer
*   .*************.****** ***

17. spacer 1.3|262948|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MH616856 (Microviridae sp. isolate ctcg971, complete genome) position: , mismatch: 7, identity: 0.767

catttgggaaaaggcacagcctgaattgtt	CRISPR spacer
gttgctggaaaagcaacagcctgaattgtt	Protospacer
  * . *******  ***************

18. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 8, identity: 0.733

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
aacacattatcaaaatgaaacaggaagggg	Protospacer
   *******************..***..

19. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NC_023917 (Clostridium perfringens plasmid pCP-OS1 DNA, complete sequence, strain: OS1) position: , mismatch: 8, identity: 0.733

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
gagatcttataaaaatgagacaaaaagaag	Protospacer
  .*. **** *******.**********

20. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to NC_023918 (Clostridium perfringens plasmid pCP-TS1 DNA, complete sequence, strain: TS1) position: , mismatch: 8, identity: 0.733

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
gagatcttataaaaatgagacaaaaagaag	Protospacer
  .*. **** *******.**********

21. spacer 1.3|262948|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MN694413 (Marine virus AFVG_250M994, complete genome) position: , mismatch: 8, identity: 0.733

catttgggaaaaggcacagcctgaattgtt	CRISPR spacer
cgattgggacaaggaacagcctgaatatgc	Protospacer
*. ****** **** ***********   .

22. spacer 1.1|262816|30|NZ_CP024728|CRISPRCasFinder,CRT matches to MG592462 (Vibrio phage 1.087.A._10N.261.45.F9, partial genome) position: , mismatch: 9, identity: 0.7

ttaacattatcaaaatgaaacaaaaagaat	CRISPR spacer
caatgattattaaaatgaaacaaaaaatta	Protospacer
. *  *****.***************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

594686 : 640527

Bacillus_phage(40.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097647326.1\|594686_595586_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_044047448.1\|596553_596952_+	hypothetical protein	NA	NA	NA	NA
WP_100014913.1\|597172_599029_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_045168229.1\|599046_599889_+	hypothetical protein	NA	NA	NA	NA
WP_100014914.1\|599878_601519_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_099891194.1\|601542_601908_+	hypothetical protein	NA	NA	NA	NA
WP_099891192.1\|601972_602446_+	hypothetical protein	NA	NA	NA	NA
WP_100014915.1\|602479_603523_+	hypothetical protein	NA	NA	NA	NA
WP_100014916.1\|603535_603967_+	hypothetical protein	NA	NA	NA	NA
WP_100014917.1\|604129_604681_+	hypothetical protein	NA	NA	NA	NA
WP_100014918.1\|604690_605179_+	hypothetical protein	NA	NA	NA	NA
WP_100014919.1\|605250_605898_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_157765017.1\|606644_606797_+	hypothetical protein	NA	NA	NA	NA
WP_100014921.1\|606883_607573_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_099891184.1\|607569_607896_+	hypothetical protein	NA	NA	NA	NA
WP_100014922.1\|608062_608521_+	hypothetical protein	NA	NA	NA	NA
WP_045168226.1\|608543_609017_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_045168225.1\|609180_609621_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_080889514.1\|610729_611221_+	HNH endonuclease	NA	NA	NA	NA
WP_045168223.1\|611222_611639_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_096409094.1\|612051_612792_+	hypothetical protein	NA	NA	NA	NA
WP_157765986.1\|612754_613126_+	HNH endonuclease	NA	NA	NA	NA
WP_096409479.1\|613166_613760_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_100014925.1\|614557_615370_-\|transposase	transposase	A0A220NQR7	Corynebacterium_phage	4.8e-11	27.5
WP_100013832.1\|615498_616344_-\|transposase	transposase	NA	NA	NA	NA
WP_100014926.1\|616607_617720_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.9e-06	21.9
WP_100014927.1\|618105_619761_+	S8 family peptidase	A0A217EQY2	Bacillus_phage	9.8e-51	43.1
WP_100014928.1\|619854_620091_+\|protease	protease inhibitor I9 family protein	NA	NA	NA	NA
WP_100014929.1\|620325_621978_+	S8 family peptidase	A0A217EQY2	Bacillus_phage	1.1e-46	40.7
WP_100014930.1\|622399_622759_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_100014931.1\|622983_623634_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_100014932.1\|623640_624099_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_100014933.1\|626351_629513_-	DUF4981 domain-containing protein	B9U1H7	Vaccinia_virus	1.8e-125	32.2
WP_100014934.1\|636663_637149_+	DUF1896 domain-containing protein	NA	NA	NA	NA
WP_172952367.1\|637232_637388_-	hypothetical protein	NA	NA	NA	NA
WP_097550179.1\|637705_637972_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006948333.1\|637995_638304_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_100014935.1\|638306_638933_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_100014936.1\|639139_639520_+	hypothetical protein	NA	NA	NA	NA
WP_100014937.1\|639627_640527_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

655158 : 713455

unidentified_phage(28.57%)

transposase,integrase

attL 654669:654684|attR 719538:719553

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
654669:654684	attL	NA	NA	NA	NA
WP_100014945.1\|655158_656478_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.5e-17	32.9
WP_100014946.1\|656491_657745_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.6e-27	30.3
WP_100014947.1\|662640_664743_-	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	1.1e-38	30.7
WP_100014948.1\|664763_666173_-	DUF3945 domain-containing protein	NA	NA	NA	NA
WP_100014949.1\|666958_668485_-	phytoene desaturase	NA	NA	NA	NA
WP_100014950.1\|668433_669171_-	hypothetical protein	NA	NA	NA	NA
WP_100014951.1\|669181_670279_-	glycosyltransferase	NA	NA	NA	NA
WP_100014952.1\|670275_670896_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_100014953.1\|670900_671545_-	carotenoid biosynthesis protein	NA	NA	NA	NA
WP_100014954.1\|671549_672077_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_100014955.1\|672080_672938_-	phytoene/squalene synthase family protein	NA	NA	NA	NA
WP_088439803.1\|673595_674576_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_100014956.1\|674690_675431_-	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	3.8e-15	24.2
WP_100014957.1\|675435_676461_-	histidine kinase	Q9EYF3	Enterobacteria_phage	1.6e-14	28.3
WP_014709370.1\|676536_677505_+	hypothetical protein	NA	NA	NA	NA
WP_088439509.1\|677535_677967_-\|integrase	integrase catalytic domain-containing protein	A0A1W6JNC2	Staphylococcus_phage	9.1e-09	32.8
WP_018921191.1\|678098_678458_+\|transposase	transposase	NA	NA	NA	NA
WP_100014958.1\|678635_679478_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_100014959.1\|680649_681042_+	hypothetical protein	NA	NA	NA	NA
WP_100014960.1\|682170_682869_-	hypothetical protein	NA	NA	NA	NA
WP_100014961.1\|682869_684102_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_099890983.1\|684316_685618_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_157765022.1\|685941_687309_+	hypothetical protein	NA	NA	NA	NA
WP_100014963.1\|687339_689034_+	hypothetical protein	NA	NA	NA	NA
WP_100014964.1\|689098_690502_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_100015026.1\|692568_693855_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_100014965.1\|693993_695997_-	YWFCY domain-containing protein	NA	NA	NA	NA
WP_100014966.1\|696068_697349_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_100014967.1\|697345_697726_-	hypothetical protein	NA	NA	NA	NA
WP_100014968.1\|698317_699121_+	conjugal transfer protein TraA	NA	NA	NA	NA
WP_100014969.1\|699107_699581_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_100014970.1\|699587_700064_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_100015027.1\|700066_700873_+	hypothetical protein	NA	NA	NA	NA
WP_100014971.1\|701015_701318_+	DUF4134 domain-containing protein	NA	NA	NA	NA
WP_008566149.1\|701322_701658_+	DUF4133 domain-containing protein	NA	NA	NA	NA
WP_100014972.1\|701654_704168_+	TraG family conjugative transposon ATPase	NA	NA	NA	NA
WP_100015028.1\|704386_705001_+	DUF4141 domain-containing protein	NA	NA	NA	NA
WP_100014973.1\|705043_706081_+	conjugative transposon protein TraJ	NA	NA	NA	NA
WP_009236098.1\|706133_706757_+	conjugative transposon protein TraK	NA	NA	NA	NA
WP_088401306.1\|706761_707064_+	hypothetical protein	NA	NA	NA	NA
WP_100014974.1\|707056_708325_+	conjugative transposon protein TraM	NA	NA	NA	NA
WP_100014975.1\|708373_709324_+	conjugative transposon protein TraN	NA	NA	NA	NA
WP_100014976.1\|709317_709911_+	conjugal transfer protein TraO	NA	NA	NA	NA
WP_100014977.1\|709923_710406_+	DUF3872 domain-containing protein	NA	NA	NA	NA
WP_100014978.1\|710392_710902_+	lysozyme	A0A2I7S753	Vibrio_phage	5.9e-07	33.6
WP_100015029.1\|711715_711949_-	hypothetical protein	NA	NA	NA	NA
WP_100014979.1\|712204_713455_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
719538:719553	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP024728.1|WP_004338372.1|46580_47000_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP024728.1|WP_040581543.1|717080_717500_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP024728.1|WP_004338372.1|46580_47000_-|PcfK-like-family-protein

46580_47000_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.6028368794326241	1	1.0

NZ_CP024728.1|WP_040581543.1|717080_717500_-|PcfK-like-family-protein

717080_717500_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.6028368794326241	1	1.0

2. NZ_CP024727

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024727_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024727_1

751350-752549

TypeII

Consensus_repeat	Method
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	PILER-CR
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CRISPRCasFinder

15 spacers

cas2,cas9,cas3

The CRISPR arrays of NZ_CP024727_1

>merge|NZ_CP024727|1|751350-752549|PILER-CR,CRISPRCasFinder
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACCCTAAGCAGTGGGGCACTCTTTCCTGTTCAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACACTGGAAATGAGAATGTCTATATAAAAATAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACACTTGAAGCTGACCTTCAGGCAGCGGAAGCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACCTTTGCTATTAAATTTCATTCAAGAAGTCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACGTTATAATGGACAAATTATTAATGTATACGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACCTGATAACGAAAATAAAGTGATATTACAGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACTCGGCCATCTCACCGGCACGGGTGATGCAAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACTGAGATTTGTACCAATTGTAACCCATTGCAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACTTTAGGATTAACTGGTTGTTGTAGACTCTTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACTCCTAAAGCTGCAAAAGCTATCCAAGCCCAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACCGACACCTATTCGTTTACATTGAAAAACATGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACCTATTATAAAACAACATTCAGTCTTGGGGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACGTACTCGTCTAACACAAAAGCGCTGCAATTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACAAGCACACCCACACATAGAAATACTGATGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACACTCTGCCTCAACACTCGCCAAATCTCCTTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC

>NZ_CP024727|1|1|751350-752549|PILER-CR
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CCTAAGCAGTGGGGCACTCTTTCCTGTTCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTGGAAATGAGAATGTCTATATAAAAATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTTGAAGCTGACCTTCAGGCAGCGGAAGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTTTGCTATTAAATTTCATTCAAGAAGTC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	GTTATAATGGACAAATTATTAATGTATAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTGATAACGAAAATAAAGTGATATTACAGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCGGCCATCTCACCGGCACGGGTGATGCAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TGAGATTTGTACCAATTGTAACCCATTGCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TTTAGGATTAACTGGTTGTTGTAGACTCTT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCCTAAAGCTGCAAAAGCTATCCAAGCCCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CGACACCTATTCGTTTACATTGAAAAACAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTATTATAAAACAACATTCAGTCTTGGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	GTACTCGTCTAACACAAAAGCGCTGCAATT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	AAGCACACCCACACATAGAAATACTGATGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTCTGCCTCAACACTCGCCAAATCTCCTT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC

>NZ_CP024727|1|1|751350-752549|CRISPRCasFinder
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CCTAAGCAGTGGGGCACTCTTTCCTGTTCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTGGAAATGAGAATGTCTATATAAAAATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTTGAAGCTGACCTTCAGGCAGCGGAAGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTTTGCTATTAAATTTCATTCAAGAAGTC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	GTTATAATGGACAAATTATTAATGTATAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTGATAACGAAAATAAAGTGATATTACAGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCGGCCATCTCACCGGCACGGGTGATGCAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TGAGATTTGTACCAATTGTAACCCATTGCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TTTAGGATTAACTGGTTGTTGTAGACTCTT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCCTAAAGCTGCAAAAGCTATCCAAGCCCA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CGACACCTATTCGTTTACATTGAAAAACAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	CTATTATAAAACAACATTCAGTCTTGGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	GTACTCGTCTAACACAAAAGCGCTGCAATT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	AAGCACACCCACACATAGAAATACTGATGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTCTGCCTCAACACTCGCCAAATCTCCTT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024727.1\|WP_060827014.1\|766867_767869_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP024727.1\|WP_100014551.1\|741023_741983_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_CP024727.1\|WP_100013843.1\|738868_739450_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP024727.1\|WP_100013847.1\|744864_745827_-\|HAD-IB-family-phosphatase	unknown	unknown	gnl\|CDD\|378932
NZ_CP024727.1\|WP_100013853.1\|763551_764868_-\|anaerobic-C4-dicarboxylate-transporter	unknown	unknown	gnl\|CDD\|236503
NZ_CP024727.1\|WP_100013846.1\|743429_744779_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024727.1\|WP_004364539.1\|752669_752966_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP024727.1\|WP_014708933.1\|759306_760731_-\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031
NZ_CP024727.1\|WP_100013852.1\|761131_762328_-\|porin	unknown	unknown	gnl\|CDD\|369347
NZ_CP024727.1\|WP_100013854.1\|765692_766478_+\|TIGR02757-family-protein	unknown	unknown	gnl\|CDD\|378237
NZ_CP024727.1\|WP_100013849.1\|748901_750749_-\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|293741
NZ_CP024727.1\|WP_100013856.1\|768135_770232_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP024727.1\|WP_100013844.1\|739516_740956_+\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240532
NZ_CP024727.1\|WP_004363736.1\|765220_765682_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|239315
NZ_CP024727.1\|WP_061868123.1\|762436_763492_-\|L-asparaginase-2	unknown	unknown	gnl\|CDD\|182958
NZ_CP024727.1\|WP_061869026.1\|745828_746707_-\|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|260126
NZ_CP024727.1\|WP_100013851.1\|753961_758104_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP024727.1\|WP_100013848.1\|746711_747734_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP024727.1\|WP_100014552.1\|747735_748839_-\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP024727.1\|WP_100013845.1\|741996_743433_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024727.1\|WP_060827014.1\|766867_767869_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.53046e-39
NZ_CP024727.1\|WP_100014551.1\|741023_741983_-\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	5.4222e-54
NZ_CP024727.1\|WP_100013843.1\|738868_739450_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	9.58409e-69
NZ_CP024727.1\|WP_100013847.1\|744864_745827_-\|HAD-IB-family-phosphatase	gnl\|CDD\|378932	pfam12710, HAD, haloacid dehalogenase-like hydrolase.	8.74195e-29
NZ_CP024727.1\|WP_100013853.1\|763551_764868_-\|anaerobic-C4-dicarboxylate-transporter	gnl\|CDD\|236503	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed.	8.16685e-178
NZ_CP024727.1\|WP_004364539.1\|752669_752966_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.62918e-26
NZ_CP024727.1\|WP_014708933.1\|759306_760731_-\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NZ_CP024727.1\|WP_100013852.1\|761131_762328_-\|porin	gnl\|CDD\|369347	pfam07396, Porin_O_P, Phosphate-selective porin O and P. This family represents a conserved region approximately 400 residues long within the bacterial phosphate-selective porins O and P. These are anion-specific porins, the binding site of which has a higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates, while porin P has a higher affinity for orthophosphate. In P. aeruginosa, porin O was found to be expressed only under phosphate-starvation conditions during the stationary growth phase.	7.05378e-61
NZ_CP024727.1\|WP_100013854.1\|765692_766478_+\|TIGR02757-family-protein	gnl\|CDD\|378237	pfam09674, DUF2400, Protein of unknown function (DUF2400). Members of this uncharacterized protein family are found sporadically, so far only among spirochetes, epsilon and delta proteobacteria, and Bacteroides. The function is unknown and its gene neighborhoods show little conservation.	9.33244e-84
NZ_CP024727.1\|WP_100013849.1\|748901_750749_-\|phosphoethanolamine-transferase	gnl\|CDD\|293741	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase. Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase catalyzes the modification of the lipid A headgroups by phosphoethanolamine (PEA) or 4-amino-arabinose residues. Lipopolysaccharides, also called endotoxins, protect bacterial pathogens from antimicrobial peptides and have roles in virulence. The PEA modified lipid A increases resistance to the cationic cyclic polypeptide antibiotic, polymyxin. Lipid A PEA transferases usually consist of a transmembrane domain anchoring the enzyme to the periplasmic face of the cytoplasmic membrane.	1.97118e-68
NZ_CP024727.1\|WP_100013856.1\|768135_770232_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP024727.1\|WP_100013844.1\|739516_740956_+\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.09981e-106
NZ_CP024727.1\|WP_004363736.1\|765220_765682_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	7.99369e-71
NZ_CP024727.1\|WP_061868123.1\|762436_763492_-\|L-asparaginase-2	gnl\|CDD\|182958	PRK11096, ansB, L-asparaginase II; Provisional.	0
NZ_CP024727.1\|WP_061869026.1\|745828_746707_-\|decaprenyl-phosphate-phosphoribosyltransferase	gnl\|CDD\|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	3.83424e-110
NZ_CP024727.1\|WP_100013848.1\|746711_747734_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	6.9131e-18
NZ_CP024727.1\|WP_100014552.1\|747735_748839_-\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	1.87985e-06
NZ_CP024727.1\|WP_100013851.1\|753961_758104_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.9098e-48

>NZ_CP024727.1|WP_100013849.1|748901_750749_-|phosphoethanolamine-transferase
MNVLSVVSKVLEKVSYPIRGNFCFFFFMYLVGIVVSYAELPANREDASVYGNLWLELFFDLYIVCILLSLIPKCVRRWVVGAFYIIVYATSIADLFCWVKFQSSLNPSMLLLAAETDKREASEFFSSYINSEVLASSVGVLLLIIVVHCLLAVWNIYRKRKGIKYPVLLSILKDKSAHFIGIITLIFFIVSAISSYHNKREMVQIFSLKTIGDVEHELTTPDCATFYTPVYRLVFSLYANHLAAQQIDRLVEAKDRATVQSCTFDAKNIVLIIGESMGPHHSQQYGYFMNTTPRQVALEKSGFLVPFSDVVAPWNLTSFVFKNIFSMHVVGQKGEWCDYPLFPQLFRKAGYHVSFITNQFLPQAKEAVYDFSGGFFLNHKELSESMFDTRNTRLHTFDDGLLVDYDNKLKAENKENNLIIFHLIGSHVSYNRRYPKSRKHFKATDYEQKRPELTKQRRYMLAHYDNAILYNDSIVDQIVKRFANEEAVVIYMPDHGEECFEGNRGIICRNHSAEIDYDLARYEFAVPFWIYCSPKYIEKHPKVFEQIKAVRHKRFMTDALPHLLLHLGGIKAKDYRSEYDILSPQYNENRPRILKNQTNYDDLAAEHKRKAAMKP
>NZ_CP024727.1|WP_100014552.1|747735_748839_-|acyltransferase
MVDKMLNRTECNILRGIAIAGIVLHNYCHWLRPIVKENEYQFNQHNVDWFNNVMAHGFNERTFFHLLSFFGHYGVPIFLFLSAYGLVMKYEGAKTQSLPDSGSTNEPNALSFLRYHWLKLFRMMIVGFAAFILIDAMTEGQHHYELTDIVAQMGLFNNLLPNPDDIIWPGPYWFFGLMLQLYIVYRLFLYRKGWTRVVVFIAVCTIIELLCDPNGEPLNRWRYNFVGGMLPFGLGLLYAKYMRSVSLRIYGATFIVSLLLIRFGSNHFFTWLFVPMFVCSAGVSFVKLLSYWNTHYPKYTFGITKTFDWLGVISAALFISHPITRKIIIPISRGGDYWTGLLLYIIASICVAWLFKEIMRRVPSPKL
>NZ_CP024727.1|WP_100013848.1|746711_747734_-|acyltransferase
MKRKEIELANISRFRGELMGLAILFVMLFHVGVPRTDIFFGLRRMGNIGVDMFFFLSGVGLWYSWTKNADAMQFLRKRLLRIYPAWFIVASLYYIPDFLSLAWVQHSGHSTNIIDLIGDIAINWDFWLHDELTFWYIPAAMMLYLVTPAYLSLIIKHPTYRWIPALMIAWCVVVQYVSPIHEAVGHIEIFWSRIPIYFIGLNFGAAVKEKKTLEGSSIWLILLTFAGMLAACIYLEQARHGRFPLFLERMLYIPLTITGILLLCIALDRWSGKRLHKALIFVGSISLEIYLLHNHFILIYIEQLGWHYWAKFLATLAIVLPFAWLLHKGVEKITMKIERS
>NZ_CP024727.1|WP_061869026.1|745828_746707_-|decaprenyl-phosphate-phosphoribosyltransferase
MKEIIRLIRPHQWIKNLVVLFPIFFGKALGNIESLYEGCITMIAFSFIASSIYCLNDIVDVADDRRHPKKCNRPLASGKISIAQGYAIMGIMVILSMVSLLFLPQQRIETGGVIGFYWALNVAYCLYLKQHAIIDVCIVAFGFVLRILAGGMATDIRLSKWIVLMTFLLMLFLSFAKRRDDVLRMNETGEAPRKNTIRYNLTFINQAITITASVTLVCYIMYTVSPETIANFHTENLYLTSVFVLLGLLRYIQIAVVDKKSGDPTKVILHDRFIQFIVLGFGLTFLIIIYFL
>NZ_CP024727.1|WP_100013847.1|744864_745827_-|HAD-IB-family-phosphatase
MKVYAFDFDGTLTKKDTFVEFIEFSKGFGKAFWGFFLFSPILVLMKLRLYPNWKAKQRVFSWFFKGMEIDDFNRLCKDFATEKRGIMRQSGLETIRKALNEGDSVIIITASIENWVKPFFEEFGDKIRVEGTQIDVRLGTITGQFLTKNCYGKEKIKRLKSAFPYRKAYELIAFGDSKGDRYLLKEADKSYYKPFRGRKNENYGEIVRFGIVGVLATALQYGIYLLLIKWIEPRISNTVGYLLSFIFNYIASTKFTFKVKSTAKKGAGFTFAHIINYGLQTVFLTLFLWLGLPKNIAMIPVFGICVPINFILVRLFLKRK
>NZ_CP024727.1|WP_100013846.1|743429_744779_-|hypothetical-protein
MSVFGIFAVKKEERLLAFAMLFVFLAFNALLISSHFGVYTMGAHGGFWSLFTKNFRMSGYDNWSWITISCMRVHFETIRHPLFLTLLYPLYWLNHWLINAVGINFAVFFMAIIIVLSAFYSVIFTYRILHEVLELQRKDATLLTLFLFSFGHILVPAMVPDHFIISLMLLTMTLYIAGIRQKQGKLINEWQSFLLIFFTAGMAASNAGKTILAGLFTNGRKFFSFKYLTIGIILPLALLFGIQQMQYYQVEVPQEEVTKKIVSNKKKKQPGKFEAHTKKRNAWLHAHTGQAASSEGIGKLMDISTSRTKTLIENFFGEPIQLHQEYLLKDVSWDRPIFVKYSWIINYVVEALIVLLFLIGIVAGWRYKFMKMLLLWFACDFTLHIIMGFAINEVYIMTAGWTFIIPISIGYLLRILSRQSRFILRITLVLLTSWLWVYNGGQIIYYLIA
>NZ_CP024727.1|WP_100013845.1|741996_743433_-|hypothetical-protein
MNAIVGFLTIKREERLPVGLFFVWQLLLQTLAIAKYVPLFTKPSSNYYKLFVDNYHLSGFDPLTYLVVSDWSLAYDVNRHPLLAFFYYPFSLLNQLLIHATGINFSVYIVAVVLIFFSTYGFVLMLRIQRHIIGIASFDSAILAFILYSFSHILLSSIAPDHFVLSLFMLLLTLYIAGKQLQEQKEVSIWQTILLFLLTAGISLNNGLKVFLSNLFTRGKRFFTIKNIFLAIILPAAAIFAIGEWQHEQFIADKVRASKVKKRNAIKAERKAMFAAFKDTTHIKDSAKQEQTFQKMWKAHRKEVLRAEAKQPQKVHSGKPMSNKRFLNWTDVSTSRTETIVENLFGESIQLHQKHTLEDVMKTRPVIVTYDWIGNYVVEALIFLLFIVGIWCGRHVKFLWLCLSFAALDIILHIGLGFGINEVYIMTAHWIYVIPLSIAFFVRNTCGRTRQTLRILLVLLAIYLVVYNVSLLVQYLYF
>NZ_CP024727.1|WP_100014551.1|741023_741983_-|glycosyltransferase
MKASVSIVLCTYNGAKYIKEQLDSILAQTYPLHEIIVQDDHSTDETTQILQEYACKHSLIKVFQNDSAQGVNGNFLSAMQRATGEYIAISDQDDIWETDKIENQINSIGKNLLCSGLSRPFSTDGSFAYFDQRKRNVHAIRMCFLCLPGHTLLFRRELADMLPPLSHPIYKYSMYDAALSITASAHKSIVFIDKILVNFRRHTTATTYNDYSKSLPSWRNALHILRWGITHFSETRKQVHPLFAAKLSLLNYVNADNEEANAAKKILELELQNGILPFMKLQHHCIKNYKYLFHTEGKGFVRLVRAALYPIMQLNMYAK
>NZ_CP024727.1|WP_100013844.1|739516_740956_+|lipopolysaccharide-biosynthesis-protein
MAEQTLKEKTAKGLFWGALNNGTMQILNALIGILLARLLSNSDYGLMGMLAVFTAVAGALQESGFTSAIANLENPTDNDYNSVFWFSTIVSWCSYIVLFFSAPLIANFFHHAELIDLSRFLFVSLLFSAIGTAPTAYLFKNIMVKETIILRVSSLVVSGIVGIVLALQGYGYWSLAWQQVLYITLTSLGRFFLIPWRPSLKIDFVPVRRMFSFSYKILVTTVVNVISQNLLTFIFGRLYTANAVGNFSQAFKWDTMASTMVSGTTSQVAQPILVEVKAERERQVLVFRKMLRFTAFLAFPAMFGLGMVAYEFIIVFIADKWVDSVPLLRILCISGAFLPFYTLYQNLMISRGKSDVYLWVTTSLIAVQLLLVLLFHSKGMVFMVSAYTVATVLWLFVWQYFAHREISLRLWDVLLDIVPYMLVSAAIMVAVYMATGNIRNLIVLLLARIGLAVVAYFIVMKLLGSKMLDECIGYLRRKK
>NZ_CP024727.1|WP_100013843.1|738868_739450_+|nicotinate-nucleotide-adenylyltransferase
MKVGIYGGSFNPIHNGHIKLAEIFLQKACLDEVWFMVSPQNPFKINDKLLDDTLRLQLVRKALNGKKSMVACDYEFRLPKPSYTWDTLQRLSADFPTYEFVLLIGGDNWQAFDKWYHAEDILANYRIAVYPRKSDETVEKCNTLPSENVTLLNIPLINISSTDIRLRIKNGHTIKELVPECIEKDVEKYYNGK
>NZ_CP024727.1|WP_004364539.1|752669_752966_-|CRISPR-associated-endonuclease-Cas2
MVFFDLPTDTKKERKAASLFRQNLLKDGFTMFQFSIYIRHCGSKENMEVHIKRVSTFIPAYGKVGIMGITDKQFEEIKLFYGKKPQKPNAPGAQLELF
>NZ_CP024727.1|WP_100013851.1|753961_758104_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKRILGLDLGTTSIGWALVNEAESNNEASSIVRLGVRVNPLTVDEKSNFEKGKAITTNADRQLRHGARINLQRYKLRRQNLHDCLQKQGWLGTEAMYEEGKASTFETYKLRAKAAEEEISLHEFARVLFMLNKKRGYKSNRKANNKEDGQLFDGMTIAKKLYEEHLTPAEYSLQLLNKGKKFTQGYYRSDLNAELERIWGEQKKYYPEILTDEFKQQLEGKTKTNTSKIFLAKYGIYSADLKGLDRKLQPLKWRVEALKQQVDKEVLAFVVSDLKGQIANTSGLLGAISDRSKELYFNKQTVGQYLWASLEENPHISIKNKPFYRQDYLDEFEKIWETQAAFHKQLTPELKQEIRDIIIFYQRPLKSKKSLISVCELEQRKVKATIDGKEKEITIGPKVAPKSSPVFQEFRIWQNLNNVLLIDNDTNEKRPLDEDERYLLYKELSIKAKLSKTEALKILNKKGKQWDLNYKELEGNRTQAILFDCYNRIITLTGHEECDFKKIKASEIRHYVSTIFKNLGFSTEILDFDPSLEKHELEKRPMYQLWHLLYSYESDNSRTGNESLLRKLETTFGFPEEYATVLCDVVFEEDYGNLSVKAMRKILPYLQAGNDYSQACAYAGYNHSRHSLTKEELDQKVYKERLELLPKNSLRNPVVEKILNQMINVINAIIDEYGKPDEIRIEMARELKSSAIERENRTRAISQGNAENQRIREILEKEFALSYISRNDIIKYKLYEELKPNGFKTLYSDTYIPKDKLFSKDFDIEHIIPKARLFDDSFSNKTLEARDINLAKSSKTAFNFVKEKYGEEGAEAYKKKLDMLLDNDVISKAKYNKLLMAEADIPSGFIERDLRNTQYIAKKACEILGELVRTVTPTTGEITNRLREDWQLVDVMKELNFEKYEKLGLTEIVEDRDGRKIKRIKDWTKRNDHRHHAMDALAIAFTKPSFIQYLNNLNARSNKGDSIYAIENKELHYEEGKLRFNAPIPVNEFRAEAKRHLSAILVSIKAKNKVMTQNVNKIKTKHGIIKKIQLTPRGPLHNETIYGTKMRPIIKMVKVGAALDEATINKVSSPAIREALLKRLNEYSGNAKKAFTGKNTLDKNPIYLNVERTKVVPTLVKTVEWENYHPIRKPITPDLKVDKVIDKGIRDILKARLEEFNGDAKKAFSNLEESPIYLDEAKKIALKRVSIEGVLSAIPLHTLKNQAGKPITGKDGKPVLGNYVQTSNNHHIAFYYDEDGNLQDNAVSFFEAAERKSQGVPVIDKDYNRNKGWRFLFTMKQNEYFVFPNEATGFIPSEVDLMDEANYGIISPNLYRVQKVSRIDKGISASRDYWFRHHLETILNDDAKLKNLAFKRIRGLLELKDIIKVRINSTGKIVAVGEYD
>NZ_CP024727.1|WP_014708933.1|759306_760731_-|aspartate-ammonia-lyase
MANETNNKEFRIESDLLGELQVPANAYYGVQTQRAVNNYHISGKRMCDYPDYVIAMAYVKLAAVETNRELGEINDEICDAMAQACREIIDGKFHEDFVTDMVQGGAGTSVNMNANEVIANRACEILGHQKGEHKYCAPNDHANCGQSTNDAYPSAIHLALIRMNKTFVEKLAKLVASFRKKAEEFKKDIKMGRTQLQDAVPMTSGQEFNAFANLLEAEIANLNKSAEMFLEINMGGTAIGTGLNAAPGFPEICAKKLSELTGMPFKASEDLVAATPDTTDLVNYSGAMKRLAIKLSKICNDLRLMASGPRCGLHEINLPPMAPGSSIMPGKVNPVIPEITNQTCFKVIGNDTTVTLAAEAGQLQLNVMEPIIMQCLVEDITWLGEAFDTLREKCIDGITVNSEHNAATVKNSIGIVTALNPYIGYKNSTKIAKEALETGGSVYDLVLKNGVLTKEQLDKILSPEHMLDSEEKVK
>NZ_CP024727.1|WP_100013852.1|761131_762328_-|porin
MKKTILLSALLAIATSGMAQDNHSYGAGDGDFKSLSEEVAKLKKHNDMFNVYFNYAASGQISQDANKDWGTRFANKQLRIEIKGNLTDKLYYRLRHRLNKANGAQSEDNFAKATDIMMVGYKFNDKLKIEAGKMCQIWGGFEFDENPMYIYQYSDMVDNMDNFMAGVVLSYKPVPTQELAFEVSDAHNNKFATEYGSNPVSLEKNGVRQLKASRNPLTYIANWNGSFCDNKLLTRWSWGIQTQAEHKYSRMLVLGQQLNLPKMQWYFDYMGAFDGLDRLKIASSEATAVPAHTGESYFSDVHYNSFITKMNWQFAPQWNLMLKGMYETASVTKIEQMKEYRKSYAYMGSIEYYPVKSQDFRIFLAYIGRKYDYSKASGLKDYNTNRIEIGFMYRIKAY
>NZ_CP024727.1|WP_061868123.1|762436_763492_-|L-asparaginase-2
MRRFKISVLLVLALLVSSVVLAQKPKIRILATGGTIAGVSASATSSAYGAGQVGVQTLIDAVPQIKDVANVSGEQIVNIGSQDMNDAVWLKLAKRINQLLNEEGYDGVLVTHGTDTMEETAYFLSLTVHSDKPVVLVGSMRPSTAISADGPANLYNGICAVADPSSKGQGVMVCMNNELFEAKSVLKTHTTDCATFKGGLYGEMGYVYNGKPVYLHKPMAKQGLQSEFDVKNLTALPKVGIVYGYANCSPLPMQAFVDAKYDGIVLAGVGDGNFYKDVFDVALKAVGNGINVVRASRVPFGPTNLNGEVDDAKYHFIASLNLNPQKARVLLMLALTKTKDWQKIQQYFAEY
>NZ_CP024727.1|WP_100013853.1|763551_764868_-|anaerobic-C4-dicarboxylate-transporter
MELIVLAELLVVLAMIFIGARVGGIGLGIYGMIGVFVLVFGFGLKPGSVPIDVMMIIVAVITAAAALQASGGLEYLVGIAAKFLRKHPEQITYFGPLTCWLFCIVAGTAHTSYSLLPIISEIAQANKIRPERPMSLSVIAASLGITGSPVSAATAALISQDILGAKGIELGTILIVCIPASLIAILVAAFIHNRIGKELEDDPEYKRRVAEGIINPEEDKHNLEMAEEQPNPHAKYSVWAFFAGVILVVIFGFFPKLRPEGVTMSQTIEMVMMSIAAVILLVGKAKASDAVNGNIFKAGVNAVVAIFGIAWMGSTFYLGNQDYLNNALSGMISTAPFLFTVALFIMSIMLFSQAATVTTLYPVGVALGINPMFLVAMFPACNGYFFLPNYPTEVAALDFDRTGTTRVGKYVINHSFQLPGFVTTIVSIGVAAIIVQFL
>NZ_CP024727.1|WP_004363736.1|765220_765682_+|thioredoxin-dependent-thiol-peroxidase
MNIGDKAPELLGTDQDGKEIKLSDYKGKKIVLYFYPKDSTPGCTSQACSLRDNYELMQKRGYAVIGVSVQDEKSHKKFIEKYNLPFPLIADVDKTLNETFGVYGEKKMCGRTYMGTYRTTFIINEEGVIEEIFTPKQIKVKEHAEQILKLGAE
>NZ_CP024727.1|WP_100013854.1|765692_766478_+|TIGR02757-family-protein
MKQAQRISKATKEKLVAFAALYENENFLDGDPSWFMHQVDGRQNKEVMAFMAACLSYGSRKVFMPRIQFLLDCAKGNPYKWIIKEGFRRDIPDNSACFYRLYTNHTMHSFFSVLAEMLNHYGCIADYIKHFASEKNGITTDKIEAIVAIEALCAFFAERQVVGIVPKNTSSSCKRICMFLRWLVRNNSPVDLGIWHDFIDKRSLIIPLDTHVLQQATHLKLLNTSSATMSVARRLTDALLKVFPDDPLKGDFALFGYGINS
>NZ_CP024727.1|WP_060827014.1|766867_767869_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MTLKKIVRTLGLSALLGFVATPVCAQDLIARQSPVDRRAKALDTIVINRLQESEEIENPASMLYSDWSTSKTHAQGYLPDVYKIDLRGFHMPTPSRVVTSNYGRRWGRVHKGLDIKVYIGDTIRAAFSGKIRVVGYDARGYGKYVIIRHNNGLETYYGHLSKQIVHANQTVRAGEPIALGGNTGRSTGSHLHFETRLAGVAINPALLFDFPNQDVTGDFYVFRRQTLDSESARATALRGTAASPGYSRENIQGVGRSNTTFNNNNTANTDFSSRRNSVAQQTSSNQILYHKVTEGETLESIARQHGISKEQLCKLNHLGVYTKLVQGQILRYS
>NZ_CP024727.1|WP_100013856.1|768135_770232_-|ATP-dependent-DNA-helicase-RecG
MDILQQDIMYLIGVGPRRREILKKELGVCTYRDLLEYYPYKYVDRTKVYHISELVPDMPFVQIKGHILSFEEFDMGRRKKRIVAHFTDGHGVCDLVWFNGTQYIYKNYFIGKEYVVFGKPTLYNQRFQFTHPDIDDASELQLNNMGMQPFYTTTEKMKKSGMTSHAVEKLTKTLIEKLATPLPETLPDFITQRLHLISRDEAMRKIHYPKSVEDTQQAQLRLKFEELFYVQLNILRYASDHRRKYRGYNFKTVGTQFNWFYSHNLPFELTNAQKRVMKEIRADMGNGQQMNRLLQGDVGSGKTLVALMSMLIAVDNGFQACLMAPTEILAEQHLQTLKDLLRGMNIRIELLTGIVKGKKRKEVMDGLIDGSIHIAVGTHAIIEDKVQFNNLGLAVIDEQHRFGVAQRAKLWSKNENPPHILVMTATPIPRTLAMTIYGDLDVSVIDELPPGRKPIQTIHKFDTQTTSLYDGIRKQINLGRQVYIVFPLIKESEKIDLKNLESGYEALKEVFPEYKMSKIHGKMKDKEKEAEMKLFVEGQTQILVATTVIEVGVNVPNASVMVILDAQRFGLSQLHQLRGRVGRGAEQSYCILVTSQKLTTETRKRIDIMCDTNDGFEIAEADLKLRGPGDLEGTQQSGIAFDLKIADIACDGQLVQLARDEAKKIIDNDPTCSKSEYNLLWNRLKELRKANINWAAIS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024727_1	1.3\|751551\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751551-751580	30	NZ_CP049911	Diaphorobacter sp. HDW4A plasmid p_unnamed1, complete sequence	87882-87911	6	0.8
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	NZ_CP044515	Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence	5865-5894	6	0.8
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	NC_025136	Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence	4947-4976	6	0.8
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	NZ_CP044511	Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence	5814-5843	6	0.8
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	KJ021043	UNVERIFIED: Klebsiella phage Kpn112, complete genome	30384-30413	6	0.8
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	JX866719	Klebsiella phage JD001, complete genome	31434-31463	6	0.8
NZ_CP024727_1	1.15\|752473\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	752473-752502	30	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	403058-403087	6	0.8
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MH370366	Salmonella phage S113, complete genome	31178-31207	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT074463	Salmonella phage gmork, complete genome	42959-42988	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT074455	Salmonella phage beppo, complete genome	43065-43094	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT074460	Salmonella phage bux, complete genome	43846-43875	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MH370386	Salmonella phage S147, complete genome	30617-30646	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT074456	Salmonella phage polluks, complete genome	43652-43681	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT074452	Salmonella phage vaffelhjerte, complete genome	42787-42816	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT004791	Salmonella phage vB_SenS-3, complete genome	76298-76327	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT774404	CrAssphage cr114_1, complete genome	11332-11361	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MT774407	CrAssphage cr125_1, complete genome	96029-96058	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MF774688	Salmonella phage SP1a clone contig.00002 genomic sequence	31266-31295	7	0.767
NZ_CP024727_1	1.4\|751628\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751628-751656	29	MT121964	Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds	2057-2085	7	0.759
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	508482-508510	7	0.759
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN340231	Escherichia phage phiv205-1, complete genome	2518-2546	7	0.759
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	CP000711	Enterobacteria phage CUS-3, complete genome	1465-1493	7	0.759
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	AP013574	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C115A-MedDCM-OCT-S41-C92, * SEQUENCING IN PROGRESS *	14804-14833	7	0.767
NZ_CP024727_1	1.6\|751780\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751780-751809	30	AP013370	Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-C115A-MedDCM-OCT-S39-C87	11529-11558	7	0.767
NZ_CP024727_1	1.7\|751857\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751857-751886	30	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	247004-247033	7	0.767
NZ_CP024727_1	1.15\|752473\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	752473-752502	30	NZ_AP021877	Desulfosarcina ovata strain 28bB2T plasmid Do28_1, complete sequence	97030-97059	7	0.767
NZ_CP024727_1	1.2\|751474\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751474-751503	30	MN694467	Marine virus AFVG_250M311, complete genome	21400-21429	8	0.733
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN694142	Marine virus AFVG_250M416, complete genome	59174-59202	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN694645	Marine virus AFVG_250M761, complete genome	1148-1176	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN694645	Marine virus AFVG_250M761, complete genome	34122-34150	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN693878	Marine virus AFVG_250M440, complete genome	52-80	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN693878	Marine virus AFVG_250M440, complete genome	34085-34113	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN694199	Marine virus AFVG_250M386, complete genome	12737-12765	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN693872	Marine virus AFVG_250M911, complete genome	14455-14483	8	0.724
NZ_CP024727_1	1.5\|751704\|29\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751704-751732	29	MN694696	Marine virus AFVG_250M540, complete genome	15208-15236	8	0.724
NZ_CP024727_1	1.7\|751857\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751857-751886	30	NZ_CP046321	Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence	1708-1737	8	0.733
NZ_CP024727_1	1.7\|751857\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751857-751886	30	NC_013442	Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence	78871-78900	8	0.733
NZ_CP024727_1	1.7\|751857\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751857-751886	30	MF324907	Arthrobacter phage Beans, complete genome	3985-4014	8	0.733
NZ_CP024727_1	1.9\|752011\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	752011-752040	30	MN694494	Marine virus AFVG_250M305, complete genome	31907-31936	8	0.733
NZ_CP024727_1	1.7\|751857\|30\|NZ_CP024727\|PILER-CR,CRISPRCasFinder	751857-751886	30	AP019515	Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome	271629-271658	9	0.7

1. spacer 1.3|751551|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP049911 (Diaphorobacter sp. HDW4A plasmid p_unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

acttgaagctgaccttcaggcagcggaagc	CRISPR spacer
aagtgctgctgacctggaggcagcggaagc	Protospacer
*  **  ********  *************

2. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP044515 (Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

ctgataac---gaaaataaagtgatattacagt	CRISPR spacer
---aaagcttagaaaataaagttatattacagt	Protospacer
   * *.*   *********** **********

3. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NC_025136 (Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence) position: , mismatch: 6, identity: 0.8

ctgataac---gaaaataaagtgatattacagt	CRISPR spacer
---aaagcttagaaaataaagttatattacagt	Protospacer
   * *.*   *********** **********

4. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP044511 (Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

ctgataac---gaaaataaagtgatattacagt	CRISPR spacer
---aaagcttagaaaataaagttatattacagt	Protospacer
   * *.*   *********** **********

5. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to KJ021043 (UNVERIFIED: Klebsiella phage Kpn112, complete genome) position: , mismatch: 6, identity: 0.8

ctgataa--cgaaaataaagtgatattacagt	CRISPR spacer
--gaaaatttaaaaataaagagatattacagt	Protospacer
  ** **  ..********* ***********

6. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to JX866719 (Klebsiella phage JD001, complete genome) position: , mismatch: 6, identity: 0.8

ctgataa--cgaaaataaagtgatattacagt	CRISPR spacer
--gaaaatttaaaaataaagagatattacagt	Protospacer
  ** **  ..********* ***********

7. spacer 1.15|752473|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 6, identity: 0.8

actctgcctcaacactcgccaaatctcctt	CRISPR spacer
atactttctcaacaatcggcaaatctcctt	Protospacer
*. ** .******* *** ***********

8. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MH370366 (Salmonella phage S113, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

9. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT074463 (Salmonella phage gmork, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

10. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT074455 (Salmonella phage beppo, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

11. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT074460 (Salmonella phage bux, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

12. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MH370386 (Salmonella phage S147, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

13. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT074456 (Salmonella phage polluks, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

14. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT074452 (Salmonella phage vaffelhjerte, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

15. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT004791 (Salmonella phage vB_SenS-3, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aactctaatgattatgtctatataaaaata	Protospacer
* .   *****  *****************

16. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT774404 (CrAssphage cr114_1, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
agaagaaatgataatgtttatataaaacca	Protospacer
*  .******* *****.********* .*

17. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT774407 (CrAssphage cr125_1, complete genome) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
agaagaaatgataatgtttatataaaacca	Protospacer
*  .******* *****.********* .*

18. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MF774688 (Salmonella phage SP1a clone contig.00002 genomic sequence) position: , mismatch: 7, identity: 0.767

actggaaatgagaatgtctatataaaaata	CRISPR spacer
aagaaagatgggtatgtctatataaaaata	Protospacer
*  ..*.***.* *****************

19. spacer 1.4|751628|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MT121964 (Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds) position: , mismatch: 7, identity: 0.759

ctttgctattaaatttcattcaagaagtc	CRISPR spacer
aatagtaattaaatttcattgaagaagta	Protospacer
  * *. ************* *******

20. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.759

gttataatggacaaattattaatgtatac	CRISPR spacer
ggaataatggacaatttattaatggagct	Protospacer
*  *********** ********* *  .

21. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 7, identity: 0.759

gttataatggacaaattattaatgtatac	CRISPR spacer
gcggtaatggataaattattaatgttttt	Protospacer
*. .*******.************* * .

22. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 7, identity: 0.759

gttataatggacaaattattaatgtatac	CRISPR spacer
gcggtaatggataaattattaatgttttt	Protospacer
*. .*******.************* * .

23. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to AP013574 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C115A-MedDCM-OCT-S41-C92, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

ctgataacgaaaataaagtgatattacagt	CRISPR spacer
caaagaacgaaaataaagtattattacaag	Protospacer
* .* **************. *******.

24. spacer 1.6|751780|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to AP013370 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-C115A-MedDCM-OCT-S39-C87) position: , mismatch: 7, identity: 0.767

ctgataacgaaaataaagtgatattacagt	CRISPR spacer
caaagaacgaaaataaagtattattacaag	Protospacer
* .* **************. *******.

25. spacer 1.7|751857|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 7, identity: 0.767

tcggccatctcaccggcacgggtgatgcaa	CRISPR spacer
tcggccatctcaccgacacggcgggtgatc	Protospacer
***************.*****  *.**

26. spacer 1.15|752473|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_AP021877 (Desulfosarcina ovata strain 28bB2T plasmid Do28_1, complete sequence) position: , mismatch: 7, identity: 0.767

actctgcctcaacactcgccaaatctcctt	CRISPR spacer
tttttgcctcaacatttgccaaatctccgg	Protospacer
 .*.**********.*.***********

27. spacer 1.2|751474|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694467 (Marine virus AFVG_250M311, complete genome) position: , mismatch: 8, identity: 0.733

actggaaatgagaatgtctatataaaaata	CRISPR spacer
cttggaaatggggatgtctatataaatgat	Protospacer
 .********.*.************* .

28. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694142 (Marine virus AFVG_250M416, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

29. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

30. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

31. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN693878 (Marine virus AFVG_250M440, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

32. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN693878 (Marine virus AFVG_250M440, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

33. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694199 (Marine virus AFVG_250M386, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

34. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN693872 (Marine virus AFVG_250M911, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

35. spacer 1.5|751704|29|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694696 (Marine virus AFVG_250M540, complete genome) position: , mismatch: 8, identity: 0.724

gttataatggacaaattattaatgtatac	CRISPR spacer
aaacaaatggacaaagtattaatggatat	Protospacer
.    ********** ******** ***.

36. spacer 1.7|751857|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NZ_CP046321 (Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcggccatctcaccggcacgggtgatgcaa	CRISPR spacer
tcggcgatctcaccgccacgggtcagctcc	Protospacer
***** ********* ******* *  .

37. spacer 1.7|751857|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to NC_013442 (Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence) position: , mismatch: 8, identity: 0.733

tcggccatctcaccggcacgggtgatgcaa	CRISPR spacer
tcggcgatctcaccgccacgggtcagctcc	Protospacer
***** ********* ******* *  .

38. spacer 1.7|751857|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MF324907 (Arthrobacter phage Beans, complete genome) position: , mismatch: 8, identity: 0.733

tcggccatctcaccggcacgggtgatgcaa	CRISPR spacer
gagctgctctcaccggcccggctgatgcaa	Protospacer
  * .  ********** *** ********

39. spacer 1.9|752011|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to MN694494 (Marine virus AFVG_250M305, complete genome) position: , mismatch: 8, identity: 0.733

tttaggattaactggttgttgtagactctt	CRISPR spacer
attaggattaactcgttgttgtggtatagg	Protospacer
 ************ ********.*  *

40. spacer 1.7|751857|30|NZ_CP024727|PILER-CR,CRISPRCasFinder matches to AP019515 (Halomonas sulfidaeris ATCC BAA-803 plasmid pBAA-803-A DNA, complete genome) position: , mismatch: 9, identity: 0.7

tcggccatctcaccggcacgggtgatgcaa	CRISPR spacer
cgcaagatctcaccggcacggatgatgtca	Protospacer
.  .  ***************.*****. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

466126 : 514303

unidentified_phage(28.57%)

integrase,transposase

attL 458065:458079|attR 521299:521313

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
458065:458079	attL	NA	NA	NA	NA
WP_015546386.1\|466126_467356_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.9e-23	31.6
WP_100013713.1\|467381_468584_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_006951737.1\|468590_468953_+	hypothetical protein	NA	NA	NA	NA
WP_100013714.1\|469032_470184_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.0e-11	28.4
WP_100013715.1\|470343_472041_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.5e-42	26.8
WP_100013716.1\|472044_473790_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.3e-40	27.1
WP_023925022.1\|473991_476367_+	TonB-dependent receptor	NA	NA	NA	NA
WP_006951753.1\|476385_477567_+	hypothetical protein	NA	NA	NA	NA
WP_004371346.1\|477707_478688_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004371347.1\|478779_479013_+	hypothetical protein	NA	NA	NA	NA
WP_004371348.1\|479035_479362_+	RteC domain-containing protein	NA	NA	NA	NA
WP_004371349.1\|479449_479866_-	hypothetical protein	NA	NA	NA	NA
WP_021663299.1\|480575_481004_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_100014537.1\|481636_482887_+	ATP-binding protein	NA	NA	NA	NA
WP_046824816.1\|482901_483762_+	DUF4007 family protein	NA	NA	NA	NA
WP_100013719.1\|483748_486898_+	hypothetical protein	NA	NA	NA	NA
WP_021663293.1\|486894_488004_+	hypothetical protein	M4Q4R0	Dunaliella_viridis_virus	3.6e-09	34.7
WP_157764997.1\|488179_488344_+	hypothetical protein	NA	NA	NA	NA
WP_046824815.1\|488346_489600_+	DGQHR domain-containing protein	NA	NA	NA	NA
WP_100013721.1\|489602_491873_+	DEAD/DEAH box helicase family protein	A0A2H4UTW8	Bodo_saltans_virus	1.3e-08	24.5
WP_021663289.1\|491879_492113_+	hypothetical protein	NA	NA	NA	NA
WP_100013722.1\|492109_494284_+	AAA family ATPase	NA	NA	NA	NA
WP_021663287.1\|494290_494866_+	hypothetical protein	NA	NA	NA	NA
WP_100013723.1\|495354_496575_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_100013724.1\|496631_497861_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.3e-27	37.5
WP_100013725.1\|498375_499530_+	AhpC/TSA family protein	NA	NA	NA	NA
WP_014709132.1\|499631_500171_-	phosphodiesterase	NA	NA	NA	NA
WP_061868429.1\|500302_501247_+	hypothetical protein	NA	NA	NA	NA
WP_100013726.1\|501289_502420_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_014709129.1\|502449_502869_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_100013727.1\|502865_504176_-	DUF2851 family protein	NA	NA	NA	NA
WP_172952353.1\|504700_505912_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_100013729.1\|506263_507019_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_061868419.1\|507068_508607_+	S26 family signal peptidase	NA	NA	NA	NA
WP_100013730.1\|508712_509342_+	WbqC family protein	NA	NA	NA	NA
WP_100013731.1\|509449_510055_+	hypothetical protein	NA	NA	NA	NA
WP_172952330.1\|510396_511974_-	hypothetical protein	NA	NA	NA	NA
WP_100013733.1\|512815_514303_+\|integrase	site-specific integrase	NA	NA	NA	NA
521299:521313	attR	NA	NA	NA	NA

DBSCAN-SWA_2

821926 : 897999

Bacillus_phage(15.38%)

integrase,protease,tRNA,transposase

attL 895609:895641|attR 899093:899125

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100013879.1\|821926_823327_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_100013880.1\|823380_824535_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_096406353.1\|824544_825066_-	16S rRNA processing protein RimM	NA	NA	NA	NA
WP_100013881.1\|825078_826392_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_096406363.1\|826396_826999_-	DUF4290 domain-containing protein	NA	NA	NA	NA
WP_028906343.1\|827052_827745_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_100013882.1\|828363_829152_+	hypothetical protein	NA	NA	NA	NA
WP_100013883.1\|829452_830223_+	hypothetical protein	NA	NA	NA	NA
WP_100013884.1\|830371_832222_-	glycoside hydrolase family 13 protein	NA	NA	NA	NA
WP_100013885.1\|832231_834145_-	type I pullulanase	NA	NA	NA	NA
WP_100013886.1\|834204_836406_-	glycoside hydrolase family 97 protein	NA	NA	NA	NA
WP_100013887.1\|836481_839175_-	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_100013888.1\|839840_841061_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_100013889.1\|841236_842118_-	carbohydrate kinase	NA	NA	NA	NA
WP_100013890.1\|842129_843284_-	MFS transporter	NA	NA	NA	NA
WP_100013891.1\|843301_845200_-	GH32 C-terminal domain-containing protein	S6ATV4	Bacillus_phage	3.8e-59	32.1
WP_100013892.1\|845226_847542_-	TonB-dependent receptor	NA	NA	NA	NA
WP_100013893.1\|847878_850527_+	substrate-binding domain-containing protein	Q6XM27	Feldmannia_irregularis_virus	1.7e-12	24.2
WP_097646886.1\|851282_852164_+	hypothetical protein	NA	NA	NA	NA
WP_097646885.1\|852294_852741_-	hypothetical protein	NA	NA	NA	NA
WP_097646884.1\|852937_853441_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_100013894.1\|853437_854169_+	hypothetical protein	NA	NA	NA	NA
WP_100013895.1\|854165_855080_+	hypothetical protein	NA	NA	NA	NA
WP_028906361.1\|855167_855536_+	DNA topoisomerase II	NA	NA	NA	NA
WP_100013897.1\|861611_863297_+	sulfate permease	A0A2H4J153	uncultured_Caudovirales_phage	2.5e-38	25.1
WP_100013899.1\|863605_864508_+\|transposase	transposase	NA	NA	NA	NA
WP_100013900.1\|864817_865420_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_100013901.1\|865617_867927_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	1.2e-11	34.8
WP_100013902.1\|867960_869082_-	lytic transglycosylase domain-containing protein	I6ZXX9	Escherichia_phage	2.1e-09	33.6
WP_100013903.1\|869122_869896_-	hypothetical protein	NA	NA	NA	NA
WP_100013904.1\|869919_870828_-	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	5.2e-14	36.6
WP_024998705.1\|870869_871637_-	ParA family protein	Q8JL10	Natrialba_phage	8.0e-24	38.3
WP_100013905.1\|871747_872518_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.3e-29	32.5
WP_100013906.1\|872569_873712_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_100013831.1\|874117_874963_-\|transposase	transposase	NA	NA	NA	NA
WP_100013907.1\|875299_875935_-	DedA family protein	NA	NA	NA	NA
WP_100013908.1\|875970_877428_-	MATE family efflux transporter	NA	NA	NA	NA
WP_172419443.1\|877503_878196_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_100013909.1\|878222_879773_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	7.0e-43	30.7
WP_100013910.1\|880451_883289_+	DNA gyrase/topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	1.2e-40	29.5
WP_100013911.1\|883296_884115_+	DUF3316 domain-containing protein	NA	NA	NA	NA
WP_100013912.1\|884114_885134_+	S41 family peptidase	NA	NA	NA	NA
WP_100013913.1\|885742_887410_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_100013914.1\|887673_889116_+	trigger factor	NA	NA	NA	NA
WP_014708844.1\|889950_890616_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.8e-41	46.6
WP_100013915.1\|890619_891852_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-115	52.0
WP_096406490.1\|891946_894130_+	DNA helicase RecQ	A0A2K9L021	Tupanvirus	7.2e-86	38.9
WP_100013916.1\|894771_895602_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
895609:895641	attL	NA	NA	NA	NA
WP_044249289.1\|895760_896999_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_099976809.1\|896991_897999_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
899093:899125	attR	NA	NA	NA	NA

DBSCAN-SWA_3

949957 : 1028469

unidentified_phage(25.0%)

integrase,protease,tRNA,transposase

attL 994073:994088|attR 1025645:1025660

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100013949.1\|949957_951202_-\|integrase	site-specific integrase	A0A218M9P0	Mycobacterium_phage	4.2e-06	26.0
WP_100013950.1\|951214_952444_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	5.6e-27	37.5
WP_100013951.1\|952948_953893_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_014708810.1\|953949_954510_-	ribosome recycling factor	NA	NA	NA	NA
WP_100013952.1\|954586_955063_-	GAF domain-containing protein	NA	NA	NA	NA
WP_100013953.1\|955078_955879_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_099995178.1\|955956_956970_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_100013954.1\|957020_958475_+	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
WP_100013955.1\|958725_959652_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_100013956.1\|959859_961740_+	DUF349 domain-containing protein	NA	NA	NA	NA
WP_014708801.1\|962536_962896_+	ribosome silencing factor	NA	NA	NA	NA
WP_100013957.1\|962947_965014_+\|protease	ATP-dependent zinc metalloprotease FtsH	G9E4U6	Ostreococcus_lucimarinus_virus	4.6e-98	43.7
WP_099976770.1\|965020_965884_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_100013958.1\|966321_968673_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	5.2e-05	28.6
WP_100013959.1\|969125_969938_+	peptidase	NA	NA	NA	NA
WP_100013960.1\|970092_970971_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_100013961.1\|971657_972083_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_100013962.1\|972157_975382_-	hypothetical protein	NA	NA	NA	NA
WP_100013963.1\|975378_977850_-	hypothetical protein	NA	NA	NA	NA
WP_100013964.1\|977860_978415_-	DUF3575 domain-containing protein	NA	NA	NA	NA
WP_100013965.1\|978411_979344_-	DUF3575 domain-containing protein	NA	NA	NA	NA
WP_100013966.1\|980211_981312_+	histidine kinase	NA	NA	NA	NA
WP_099976761.1\|981325_982057_+	response regulator transcription factor	NA	NA	NA	NA
WP_028904911.1\|982204_982600_+	FMN-binding protein	NA	NA	NA	NA
WP_100014558.1\|983041_984055_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_100013967.1\|984230_986351_+	cation:proton antiporter	NA	NA	NA	NA
WP_100013968.1\|986355_987033_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-32	39.9
WP_100013969.1\|987056_987914_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_100013970.1\|988391_991349_-	hypothetical protein	NA	NA	NA	NA
WP_100013971.1\|991720_992986_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_100013973.1\|993714_994644_-	ADP-ribosylglycohydrolase family protein	A0A1X6WFT7	Pacmanvirus	5.9e-37	32.6
994073:994088	attL	NA	NA	NA	NA
WP_172952338.1\|994813_996229_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_100013974.1\|996307_997267_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_044048027.1\|997276_998164_-	energy transducer TonB	NA	NA	NA	NA
WP_097646612.1\|998198_998858_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_100013975.1\|998860_999514_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_014710470.1\|999545_1000385_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_028904898.1\|1000864_1002073_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	8.0e-103	48.2
WP_100014559.1\|1002150_1004064_-	LptF/LptG family permease	NA	NA	NA	NA
WP_028904896.1\|1004458_1004827_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045166723.1\|1005072_1005525_+	cupin domain-containing protein	NA	NA	NA	NA
WP_099995159.1\|1006029_1006581_+	3'-5' exonuclease	NA	NA	NA	NA
WP_100013976.1\|1006698_1007604_-	DMT family transporter	NA	NA	NA	NA
WP_100013977.1\|1007781_1008564_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_100013978.1\|1008707_1009991_+	MFS transporter	NA	NA	NA	NA
WP_100013979.1\|1010006_1010990_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	1.9e-25	31.4
WP_100013980.1\|1011768_1012362_+	IMP cyclohydrolase	Q58MG3	Prochlorococcus_phage	3.1e-31	40.3
WP_024998806.1\|1012478_1013501_+	rod shape-determining protein	NA	NA	NA	NA
WP_045166716.1\|1013585_1014467_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_014710455.1\|1014555_1015059_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_100013981.1\|1015055_1017179_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_014710453.1\|1017228_1018704_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_100013982.1\|1019262_1020717_-	trypsin-like peptidase domain-containing protein	A0A1B1IRD3	uncultured_Mediterranean_phage	8.7e-11	30.9
WP_014710451.1\|1021113_1021698_-	LemA family protein	NA	NA	NA	NA
WP_100013983.1\|1021739_1022519_-	TPM domain-containing protein	NA	NA	NA	NA
WP_100014560.1\|1023049_1024279_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	5.8e-24	33.8
WP_100013984.1\|1024284_1025451_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-16	27.2
WP_040580766.1\|1025593_1026337_-	hypothetical protein	NA	NA	NA	NA
1025645:1025660	attR	NA	NA	NA	NA
WP_100013985.1\|1026424_1026979_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_099890983.1\|1027167_1028469_-\|transposase	IS1380 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1683320 : 1719531

unidentified_phage(28.57%)

integrase,transposase

attL 1717709:1717723|attR 1721256:1721270

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100014345.1\|1683320_1684232_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_100013832.1\|1684357_1685203_+\|transposase	transposase	NA	NA	NA	NA
WP_100014293.1\|1685594_1686494_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_100014346.1\|1686687_1687500_-	hypothetical protein	NA	NA	NA	NA
WP_100014347.1\|1687674_1688949_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	9.4e-86	41.5
WP_099977215.1\|1688954_1689911_+	D-2-hydroxyacid dehydrogenase	A0A1M7XU89	Cedratvirus	1.4e-33	31.3
WP_100014348.1\|1689941_1690577_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_100013831.1\|1691311_1692157_-\|transposase	transposase	NA	NA	NA	NA
WP_014709902.1\|1692549_1693926_-	tryptophanase	NA	NA	NA	NA
WP_100014350.1\|1694210_1695593_-	sodium:proton antiporter NhaD	NA	NA	NA	NA
WP_045168034.1\|1695759_1696155_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_100014351.1\|1696145_1696811_+	hypothetical protein	NA	NA	NA	NA
WP_100014352.1\|1696820_1698794_+	NAD-dependent DNA ligase LigA	Q332J4	Clostridium_botulinum_C_phage	1.7e-118	38.3
WP_100014354.1\|1699375_1700278_-	DUF4339 domain-containing protein	NA	NA	NA	NA
WP_028904992.1\|1700494_1701847_+	signal recognition particle protein	NA	NA	NA	NA
WP_100014355.1\|1701887_1702772_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	32.3
WP_028904994.1\|1702857_1703037_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_076123288.1\|1703050_1703284_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_096405164.1\|1703287_1704373_+	3-methyl-2-oxobutanoate dehydrogenase subunit VorB	NA	NA	NA	NA
WP_061868952.1\|1704393_1705164_+	2-oxoglutarate oxidoreductase	NA	NA	NA	NA
WP_088437745.1\|1705186_1705735_+	2-oxoacid:acceptor oxidoreductase family protein	NA	NA	NA	NA
WP_099836460.1\|1705997_1707098_+	OmpA family protein	NA	NA	NA	NA
WP_172952344.1\|1707613_1708381_+	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA
WP_100014357.1\|1708584_1710600_+	transketolase	NA	NA	NA	NA
WP_014709884.1\|1710657_1711095_+	RpiB/LacA/LacB family sugar-phosphate isomerase	A0A222YX14	Synechococcus_phage	2.2e-18	29.8
WP_100014358.1\|1711231_1712671_-	pyruvate kinase	NA	NA	NA	NA
WP_100014359.1\|1712687_1712969_-	hypothetical protein	NA	NA	NA	NA
WP_100014360.1\|1712973_1713759_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_100014362.1\|1714399_1715383_+	aminodeoxychorismate synthase component I	NA	NA	NA	NA
WP_100014363.1\|1715366_1715969_+	aminotransferase class IV	NA	NA	NA	NA
WP_099891526.1\|1716303_1716594_-	transcriptional regulator	NA	NA	NA	NA
WP_100014364.1\|1717037_1718258_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.9e-23	31.8
1717709:1717723	attL	NA	NA	NA	NA
WP_100014365.1\|1718262_1719531_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.0e-23	36.8
WP_100014365.1\|1718262_1719531_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.0e-23	36.8
1721256:1721270	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024728

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

2. NZ_CP024727

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection