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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024729 Prevotella intermedia strain KCOM 1933 chromosome 1, complete sequence 1 crisprs cas3,WYL,RT 0 0 138 2
NZ_CP024730 Prevotella intermedia strain KCOM 1933 chromosome 2, complete sequence 3 crisprs cas13b,Csx28,DEDDh 1 7 0 1

Results visualization

1. NZ_CP024729
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024729_1 1991658-1991748 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 12598 8 unidentified_phage(50.0%) integrase attL 5823:5835|attR 8858:8870
DBSCAN-SWA_2 19783 : 28784 5 uncultured_virus(40.0%) tRNA NA
DBSCAN-SWA_3 43620 : 44502 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_4 51413 : 53470 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_5 65446 : 68869 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_6 79347 : 82188 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_7 85234 : 86764 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_8 99518 : 103279 4 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_9 106627 : 107179 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_10 134334 : 135942 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_11 144824 : 151539 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_12 156602 : 158384 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_13 162925 : 164656 2 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_14 174579 : 176055 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_15 182733 : 186636 3 Aeromonas_phage(33.33%) NA NA
DBSCAN-SWA_16 190630 : 196778 5 Catovirus(66.67%) NA NA
DBSCAN-SWA_17 210419 : 211415 1 Bacteriophage(100.0%) NA NA
DBSCAN-SWA_18 221354 : 223943 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_19 237107 : 247316 6 Deep-sea_thermophilic_phage(33.33%) NA NA
DBSCAN-SWA_20 259931 : 266419 7 environmental_Halophage(25.0%) NA NA
DBSCAN-SWA_21 278658 : 282065 3 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_22 289808 : 302990 7 Mycobacterium_phage(25.0%) NA NA
DBSCAN-SWA_23 309604 : 324961 13 Helicobacter_phage(20.0%) NA NA
DBSCAN-SWA_24 333735 : 334680 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_25 338118 : 339207 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_26 343038 : 355592 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_27 368663 : 369386 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_28 393119 : 393581 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_29 397714 : 400851 3 EBPR_podovirus(33.33%) integrase attL 396544:396558|attR 406824:406838
DBSCAN-SWA_30 407752 : 410107 2 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_31 418026 : 419235 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_32 425454 : 426384 1 Pacmanvirus(100.0%) NA NA
DBSCAN-SWA_33 431350 : 432028 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_34 448835 : 454560 3 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_35 474561 : 477324 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_36 488279 : 500047 10 uncultured_Mediterranean_phage(28.57%) NA NA
DBSCAN-SWA_37 505662 : 591793 56 Bacillus_phage(15.38%) integrase,protease,transposase,tRNA attL 501772:501789|attR 543313:543330
DBSCAN-SWA_38 641987 : 643724 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_39 648551 : 649553 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_40 674047 : 684787 7 Mollivirus(33.33%) NA NA
DBSCAN-SWA_41 689257 : 696969 5 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_42 720449 : 722420 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_43 734981 : 736413 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_44 750469 : 752155 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_45 773990 : 788581 11 Cafeteria_roenbergensis_virus(40.0%) NA NA
DBSCAN-SWA_46 796900 : 798448 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_47 803246 : 803771 1 Escherichia_virus(100.0%) NA NA
DBSCAN-SWA_48 836786 : 840859 5 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_49 845781 : 848127 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_50 851218 : 856853 4 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_51 895933 : 897880 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_52 910913 : 911444 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_53 917068 : 934657 13 uncultured_Mediterranean_phage(16.67%) tRNA NA
DBSCAN-SWA_54 939098 : 943576 3 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_55 957114 : 957621 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_56 969510 : 973555 3 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_57 988980 : 989613 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_58 1001916 : 1003256 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_59 1012777 : 1015237 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_60 1022451 : 1024260 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_61 1032363 : 1033794 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 1044298 : 1045531 1 unidentified_phage(100.0%) integrase attL 1042176:1042190|attR 1047600:1047614
DBSCAN-SWA_63 1051698 : 1052205 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_64 1069576 : 1131848 42 Staphylococcus_phage(17.65%) integrase,transposase,tRNA attL 1063949:1063964|attR 1132376:1132391
DBSCAN-SWA_65 1135198 : 1136518 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_66 1143446 : 1144883 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_67 1150703 : 1157020 5 Indivirus(66.67%) NA NA
DBSCAN-SWA_68 1161738 : 1216420 44 Bacillus_phage(20.0%) integrase,protease,transposase,tRNA attL 1205015:1205030|attR 1217727:1217742
DBSCAN-SWA_69 1222785 : 1224222 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_70 1235477 : 1237541 1 Megavirus(100.0%) tRNA NA
DBSCAN-SWA_71 1256954 : 1258289 1 Cellulophaga_phage(100.0%) integrase attL 1251774:1251789|attR 1266205:1266220
DBSCAN-SWA_72 1263912 : 1267683 4 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_73 1275800 : 1278713 3 Yersinia_phage(50.0%) NA NA
DBSCAN-SWA_74 1296582 : 1297119 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_75 1304142 : 1304484 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_76 1309942 : 1311433 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_77 1340417 : 1340918 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_78 1355080 : 1373698 14 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_79 1381899 : 1384017 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_80 1401092 : 1403024 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_81 1408659 : 1410561 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_82 1417711 : 1424807 4 Liberibacter_phage(50.0%) NA NA
DBSCAN-SWA_83 1440841 : 1447490 4 Anomala_cuprea_entomopoxvirus(50.0%) tRNA NA
DBSCAN-SWA_84 1450712 : 1451252 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_85 1458410 : 1459433 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_86 1473930 : 1474584 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_87 1479488 : 1480910 1 Noumeavirus(100.0%) NA NA
DBSCAN-SWA_88 1493654 : 1504345 7 Microcystis_phage(20.0%) tRNA NA
DBSCAN-SWA_89 1519181 : 1521473 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1527961 : 1540409 14 unidentified_phage(40.0%) integrase,tRNA attL 1516392:1516406|attR 1544382:1544396
DBSCAN-SWA_91 1551124 : 1551706 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_92 1558385 : 1561628 4 Pneumococcus_phage(50.0%) NA NA
DBSCAN-SWA_93 1584103 : 1585192 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_94 1596024 : 1599835 3 Sulfolobus_monocaudavirus(50.0%) NA NA
DBSCAN-SWA_95 1604009 : 1605311 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_96 1609898 : 1610936 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_97 1624940 : 1632296 5 Cyanophage(33.33%) NA NA
DBSCAN-SWA_98 1645651 : 1649493 3 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_99 1658088 : 1663655 5 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_100 1667465 : 1672073 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_101 1687762 : 1689424 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_102 1702355 : 1703585 1 unidentified_phage(100.0%) integrase attL 1701247:1701261|attR 1705515:1705529
DBSCAN-SWA_103 1710322 : 1717206 6 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_104 1749513 : 1756572 6 Moraxella_phage(25.0%) NA NA
DBSCAN-SWA_105 1766685 : 1771562 3 Halovirus(33.33%) NA NA
DBSCAN-SWA_106 1777577 : 1778876 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_107 1793220 : 1793658 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_108 1801543 : 1802428 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_109 1805521 : 1807495 1 Clostridium_botulinum_C_phage(100.0%) NA NA
DBSCAN-SWA_110 1813331 : 1819789 5 Cedratvirus(33.33%) NA NA
DBSCAN-SWA_111 1842558 : 1844493 1 Phage_TP(100.0%) NA NA
DBSCAN-SWA_112 1850916 : 1851195 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_113 1867033 : 1867666 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_114 1870835 : 1871561 1 Geobacillus_phage(100.0%) NA NA
DBSCAN-SWA_115 1875866 : 1881053 4 Prochlorococcus_phage(66.67%) NA NA
DBSCAN-SWA_116 1887032 : 1897087 9 Tupanvirus(20.0%) tRNA NA
DBSCAN-SWA_117 1920744 : 1922034 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_118 1930154 : 1931585 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_119 1943157 : 1957678 9 uncultured_Mediterranean_phage(40.0%) tRNA NA
DBSCAN-SWA_120 1964110 : 1972897 9 Tupanvirus(33.33%) holin,tRNA NA
DBSCAN-SWA_121 1978575 : 1980435 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_122 1983990 : 1985298 2 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_123 1991833 : 1992610 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_124 2005399 : 2006608 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_125 2011921 : 2013205 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_126 2025662 : 2027579 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_127 2030602 : 2031172 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_128 2034594 : 2038158 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_129 2041379 : 2045504 2 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_130 2048991 : 2049681 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_131 2053277 : 2057865 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_132 2063918 : 2064329 1 Croceibacter_phage(100.0%) NA NA
DBSCAN-SWA_133 2075408 : 2078065 2 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_134 2084195 : 2092400 9 Hokovirus(50.0%) NA NA
DBSCAN-SWA_135 2097611 : 2098406 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_136 2109269 : 2111645 2 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_137 2122518 : 2124732 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_138 2133135 : 2135265 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP024729.1|WP_004338372.1|1047308_1047728_+|PcfK-like-family-protein 1047308_1047728_+ 139 aa aa 40 NA NA No NA
NZ_CP024729.1|WP_014709399.1|2094696_2095113_+|PcfK-like-family-protein 2094696_2095113_+ 138 aa aa 40 NA NA No NA
2. NZ_CP024730
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024730_1 94695-94801 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024730_2 253965-254788 TypeVI-B1,TypeVI-B2 NA:VI-B2
12 spacers
Csx28,cas13b

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024730_3 374814-374903 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP024730_1 1.1|94735|27|NZ_CP024730|CRISPRCasFinder 94735-94761 27 NZ_CP024729.1 1991723-1991749 2 0.926

1. spacer 1.1|94735|27|NZ_CP024730|CRISPRCasFinder matches to position: 1991723-1991749, mismatch: 2, identity: 0.926

tgcagctatatcttatgcaaaggtatt	CRISPR spacer
tgtagctatatcttatgcaaagatatt	Protospacer
**.*******************.****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024730_2 2.2|254067|29|NZ_CP024730|CRISPRCasFinder 254067-254095 29 MK250016 Prevotella phage Lak-A1, complete genome 130684-130712 6 0.793
NZ_CP024730_2 2.7|254395|30|NZ_CP024730|CRISPRCasFinder 254395-254424 30 NZ_CP030786 Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence 35130-35159 6 0.8
NZ_CP024730_2 2.1|254001|30|NZ_CP024730|CRISPRCasFinder 254001-254030 30 NZ_AP019800 Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence 204273-204302 7 0.767
NZ_CP024730_2 2.5|254263|30|NZ_CP024730|CRISPRCasFinder 254263-254292 30 LR596615 Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I 346824-346853 7 0.767
NZ_CP024730_2 2.5|254263|30|NZ_CP024730|CRISPRCasFinder 254263-254292 30 NC_042116 Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite 346824-346853 7 0.767
NZ_CP024730_2 2.5|254263|30|NZ_CP024730|CRISPRCasFinder 254263-254292 30 NC_023026 Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence 33440-33469 7 0.767
NZ_CP024730_2 2.4|254198|29|NZ_CP024730|CRISPRCasFinder 254198-254226 29 NC_014839 Pantoea sp. At-9b plasmid pPAT9B02, complete sequence 234768-234796 8 0.724
NZ_CP024730_2 2.6|254329|30|NZ_CP024730|CRISPRCasFinder 254329-254358 30 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 464586-464615 8 0.733
NZ_CP024730_2 2.11|254658|29|NZ_CP024730|CRISPRCasFinder 254658-254686 29 AP014427 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces 5336-5364 8 0.724
NZ_CP024730_2 2.11|254658|29|NZ_CP024730|CRISPRCasFinder 254658-254686 29 AP013721 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, *** SEQUENCING IN PROGRESS *** 12309-12337 8 0.724
NZ_CP024730_2 2.11|254658|29|NZ_CP024730|CRISPRCasFinder 254658-254686 29 LR214966 Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12 37233-37261 8 0.724

1. spacer 2.2|254067|29|NZ_CP024730|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 6, identity: 0.793

acgttcataatcagcatcacatctatatc	CRISPR spacer
ataaacataatcatcatcacatttatatc	Protospacer
*..  ******** ********.******

2. spacer 2.7|254395|30|NZ_CP024730|CRISPRCasFinder matches to NZ_CP030786 (Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tgactggtttgcaatattcgcagtctttac	CRISPR spacer
ggaaggattagcaatatttgcagtctttac	Protospacer
 **  *.** ********.***********

3. spacer 2.1|254001|30|NZ_CP024730|CRISPRCasFinder matches to NZ_AP019800 (Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence) position: , mismatch: 7, identity: 0.767

gaggtcaattgtgtttgcgtctacgttttc	CRISPR spacer
attgtcaattgtgtttgggtcaacgttata	Protospacer
.  ************** *** ***** * 

4. spacer 2.5|254263|30|NZ_CP024730|CRISPRCasFinder matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
atgggggattttattaatttagatgaaagg	Protospacer
******* ************** . . * *

5. spacer 2.5|254263|30|NZ_CP024730|CRISPRCasFinder matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
atgggggattttattaatttagatgaaagg	Protospacer
******* ************** . . * *

6. spacer 2.5|254263|30|NZ_CP024730|CRISPRCasFinder matches to NC_023026 (Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
ttggtcttttttattaatttagctcgtatc	Protospacer
 ***   .***************.***** 

7. spacer 2.4|254198|29|NZ_CP024730|CRISPRCasFinder matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 8, identity: 0.724

tatatagtcaatatggcttacttgttcag	CRISPR spacer
acctccgtcaatatggcttacattttcag	Protospacer
  . . *************** * *****

8. spacer 2.6|254329|30|NZ_CP024730|CRISPRCasFinder matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

cctttgtattaaaatgcttagcgaaatata	CRISPR spacer
ggtatgtattaaaatacttagctaaattac	Protospacer
  * ***********.****** ****   

9. spacer 2.11|254658|29|NZ_CP024730|CRISPRCasFinder matches to AP014427 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tttttttttggtgttttagtaaaaccttt	Protospacer
.******* **************   ...

10. spacer 2.11|254658|29|NZ_CP024730|CRISPRCasFinder matches to AP013721 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tttttttttggtgttttagtaaaaccttt	Protospacer
.******* **************   ...

11. spacer 2.11|254658|29|NZ_CP024730|CRISPRCasFinder matches to LR214966 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tgatttttggatgttttagtaatcaagga	Protospacer
.  *******.*********** ***   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP024730.1|WP_045167326.1|366099_366519_-|PcfK-like-family-protein 366099_366519_- 139 aa aa 40 NA NA No NA