CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024735	Prevotella intermedia strain KCOM 1944 chromosome 2, complete sequence	3 crisprs	DEDDh,cas13b,Csx28	1	7	0	1
NZ_CP024734	Prevotella intermedia strain KCOM 1944 chromosome 1, complete sequence	0 crisprs	RT,WYL,cas3,DEDDh	0	0	3	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024735_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024735_1

214211-214317

Orphan

Consensus_repeat	Method
GCCAGCGAGTGCAAAGAAAGTTTACTTTCAATTTGCCGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024735_1

>merge|NZ_CP024735|1|214211-214317|CRISPRCasFinder
GCCAGCGAGTGCAAAGAAAGTTTACTTTCAATTTGCCGAGTGCAGCTATATCTTATGCAAAGGTATTGCCAGCGAGTGCAAAGAAAGTTTACTTTCAGTTTGCCGAG

>NZ_CP024735|1|1|214211-214317|CRISPRCasFinder
GCCAGCGAGTGCAAAGAAAGTTTACTTTCAATTTGCCGAG	TGCAGCTATATCTTATGCAAAGGTATT
GCCAGCGAGTGCAAAGAAAGTTTACTTTCAGTTTGCCGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024735.1\|WP_099995976.1\|222943_223453_+\|DMP19-family-protein	unknown	unknown	gnl\|CDD\|379547
NZ_CP024735.1\|WP_099995979.1\|227162_228092_+\|glucosaminidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|214488
NZ_CP024735.1\|WP_099995970.1\|215166_216375_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP024735.1\|WP_045166897.1\|213303_213774_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NZ_CP024735.1\|WP_099995975.1\|221742_222903_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP024735.1\|WP_014708566.1\|223445_223925_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP024735.1\|WP_099995964.1\|203487_204975_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP024735.1\|WP_099995966.1\|207097_208240_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP024735.1\|WP_045166898.1\|214645_215074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099995965.1\|205565_207101_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP024735.1\|WP_099995967.1\|208830_210057_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP024735.1\|WP_045166900.1\|216643_218683_-\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP024735.1\|WP_045166891.1\|202388_203375_-\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP024735.1\|WP_099996176.1\|211027_212773_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP024735.1\|WP_099995971.1\|218838_219882_-\|DHH-family-phosphoesterase	unknown	unknown	gnl\|CDD\|223691
NZ_CP024735.1\|WP_088439066.1\|205164_205383_+\|DUF4492-domain-containing-protein	unknown	unknown	gnl\|CDD\|373370
NZ_CP024735.1\|WP_028905222.1\|212995_213307_+\|DUF4491-family-protein	unknown	unknown	gnl\|CDD\|379717
NZ_CP024735.1\|WP_099995972.1\|219958_220870_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|133024
NZ_CP024735.1\|WP_099995968.1\|210075_210756_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|365914
NZ_CP024735.1\|WP_014708576.1\|224819_226595_+\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775

Protein	Function_ID	Function_description	E-value
NZ_CP024735.1\|WP_099995976.1\|222943_223453_+\|DMP19-family-protein	gnl\|CDD\|379547	pfam14300, DUF4375, Domain of unknown function (DUF4375). This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.	9.73504e-46
NZ_CP024735.1\|WP_099995979.1\|227162_228092_+\|glucosaminidase-domain-containing-protein	gnl\|CDD\|214488	smart00047, LYZ2, Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.	8.16284e-40
NZ_CP024735.1\|WP_099995970.1\|215166_216375_-\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.04671e-137
NZ_CP024735.1\|WP_045166897.1\|213303_213774_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	5.34547e-75
NZ_CP024735.1\|WP_099995975.1\|221742_222903_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	2.15516e-14
NZ_CP024735.1\|WP_014708566.1\|223445_223925_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	6.75709e-80
NZ_CP024735.1\|WP_099995964.1\|203487_204975_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.49551e-40
NZ_CP024735.1\|WP_099995966.1\|207097_208240_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	7.45407e-63
NZ_CP024735.1\|WP_099995965.1\|205565_207101_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	5.64482e-165
NZ_CP024735.1\|WP_099995967.1\|208830_210057_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	5.60888e-88
NZ_CP024735.1\|WP_045166900.1\|216643_218683_-\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP024735.1\|WP_045166891.1\|202388_203375_-\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.23292e-25
NZ_CP024735.1\|WP_099996176.1\|211027_212773_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP024735.1\|WP_099995971.1\|218838_219882_-\|DHH-family-phosphoesterase	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	1.23952e-40
NZ_CP024735.1\|WP_088439066.1\|205164_205383_+\|DUF4492-domain-containing-protein	gnl\|CDD\|373370	pfam14899, DUF4492, Domain of unknown function (DUF4492). This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length. The function of these proteins is unknown.	1.57433e-25
NZ_CP024735.1\|WP_028905222.1\|212995_213307_+\|DUF4491-family-protein	gnl\|CDD\|379717	pfam14898, DUF4491, Domain of unknown function (DUF4491). This family of proteins is found in bacteria. Proteins in this family are typically between 94 and 107 amino acids in length. There is a conserved EYY sequence motif.	1.04472e-50
NZ_CP024735.1\|WP_099995972.1\|219958_220870_-\|nucleotidyltransferase	gnl\|CDD\|133024	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.	1.84025e-11
NZ_CP024735.1\|WP_099995968.1\|210075_210756_+\|peptidylprolyl-isomerase	gnl\|CDD\|365914	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyze peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilized in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function.	6.8787e-52
NZ_CP024735.1\|WP_014708576.1\|224819_226595_+\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0

>NZ_CP024735.1|WP_045166897.1|213303_213774_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MKATLILVGKTTEDVFVRAIADYTGRIAHYLPFNIVTLPELKNTKKLSEAQQKDREGEMILKEIQTSDTVVLLDEHGKEFRSVEYAVWLQKKQNTAKRLVFVIGGPYGFSNAVYDRANEKISLSKMTFSHQMVRLIFVEQLYRACSIIKGEPYHHE
>NZ_CP024735.1|WP_028905222.1|212995_213307_+|DUF4491-family-protein
MEIYFQGVVLAVCTFLIIGLLHPAVIKWEYYLGTKAWWLWLVGGIVCCVWALFVADIFWSALLGVTGASLLWGIGELFEQVKRVEKGWFPMNPKRKDAYKREE
>NZ_CP024735.1|WP_099996176.1|211027_212773_-|phospho-sugar-mutase
MQNKELIAQCEQKATQWLAPAFDEATRKAVQEMMDSENKDLLIESFYKDLEFGTGGLRGIMGAGSNRMNVYTVGMATQGFANYLKINFKDKEQISVVVCHDCRNNSRLFAETVANIFSANGIKVYLFEDLRPTPECSFAIRHFKAQGGVNITASHNPREYNGYKAYWDDGAQVLAPHDKGIIDQVNLVKIEDVKFEGNKDLIEIIGEEVDKVYLENVKTVCIDPEVIKRQHDLCIVYTPLHGAGRVMIPRALRDWGFTNIHCVEEQMVKDGNFPTVDRPNPEIAEALTLGLRDAKKLDADILMASDPDADRVGMACKDSNGEWILINGNQTCLIFLWYIITNRQALGKMTPKDYIVKTIVTTEVIAEIAKKQHIEMRDCYTGFKWIAHEIAISEGEKNYIGGGEESYGFMASDFNRDKDAVSACSLLAEICAYAKDKGKTLYDLLMDIYLEYGFSEEFTINVERPGKSGADEIQQMMRNFRANPPKDLGGSTVCLWKDYQSLEATDAAGNKTKLVMPDTSNVLQWFCTDGTKVSVRPSGTEPKIKFYLEIKDNMQTAADFKVCRARAYEKIEAIKKSLGLQ
>NZ_CP024735.1|WP_099995968.1|210075_210756_+|peptidylprolyl-isomerase
MKKTITFLLFCLVTVLAQAQTDTRREVELVTDSGTIRIALYNETPLHRDNFLKHVQNGDYNGVLFHRVIKNFMVQAGDLASKTAKAGQMLGDTPEAYSIPAEICFPKLYHKRGALAAAREGDNVNPERASSSTQFYIVWGQKFSDQQLEWAQSRIDKYTDGKAKLTPELCETYKTLGGTPHLDGSYTVFGEVLEGLEIVEKIQQAATDDNDRPINDIRIVTAKVVK
>NZ_CP024735.1|WP_099995967.1|208830_210057_+|GTP-binding-protein
MEKKETPVLLLTGYLGSGKTTLVNKILSNNKGIKFAVIVNDIGEVNIDADLIEKGGVVDQQDDSLVALQNGCICCTLKMDLVQQLSDIVKMHRFDYIVIEASGICEPAPIAQTICAYPQIYPDLAKDGRAVLDSIVTVVDARRMCDEFSAGNDLMKKELDEDDIENLLIQQIEFCSFVLLNKADDVSPEELQKVRTIVRALQPKAEIIECNYGNVDFDRILDTKDFDFDKVATSASWIAAIENEGNDEHHEHDEHHHDEHHGEKHSHHHHHHHHHDHLENEEHGEALEYNIDTFVYYARRPFDLNFFDDFVARKWPKSIIRCKGLCYFDNEKDICYVFEQAGKQVTLRNAGQWYATMPEFELREFLERNPRLKKDWEEPYGDRMQKLVFIGQNMDKAAIKAELDKCLK
>NZ_CP024735.1|WP_099995966.1|207097_208240_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MTYDFLQHYWWFLIALLGALLVFLMFVQGANSMIFQLGKTDVERRMVVNSTGRKWEFTFTTLVTFGGAFFASFPLFYSTSFGSAYWVWVIILFSFIIQAVSYEFQNKAGNLLGVKTFQTCLIINGIVGPLLLGGAVATFFTGSNFIVEKANIVNEMQPVISHWANASRGLDVLLNPWVVIFGIAVVFLARILGILYINNNVADNAIRSRVRPQLLVNTALFLVFFLAFLVKTLIGEGYAVNAEGTIVMEPMKYLNNLLDMWYLALVLLVGVLLVLFGIVRTLMQKDYIKGIWPTGIGVVLVVIVLFLIAGYNNTAYYPSTADLQSSLTIKNSCSSEFTLTAMFYASLIAPFVLAYIFYAWRSIDSKKIDRQEIEEDDHAY
>NZ_CP024735.1|WP_099995965.1|205565_207101_+|cytochrome-ubiquinol-oxidase-subunit-I
MGNLLLTIDPDVVNWSRAQFALTAIYHWLFVPLTLGLALIMAIMETYYYRTGEEFWKKTAQFWQRLFGINFAMGVATGIILEFEFGTNWSNYSWFVGDIFGAPLAIEGMLAFFMESTFVAVMFFGWKKVSRGFHLASTWLTGIGATISAWWILVANAWMQNPVGCEFNPDTMRNEMTSFWEVALSPMAVNKFTHTITSAWVLGAAFCVGVSCWYLLKKRHVEFARKSLKIGATVGLVSSLLTAMVGDESAYLVAKHQPMKLAAMEALYEGGKGEALTAVALVNPFSQPDYMNATEPPMKIAVPNALSFLATRDFNGYVPGIRNIINGYTKDDGTVEPSLKEKMARGKQAIAALKDYRSGQKTEANIKTLKDNMKYFGYGYIKNADETVPPIGINFWAFRIMVGLGSLFILVFAIILFVVYRKDITRPRLLQLVGVALIPLAYIASECGWLVAEFGRQPWTIQDMLPTWAAVSDLNSGSVALTFFLFLFLFTAMLLVEISIMCKQIKKGPEL
>NZ_CP024735.1|WP_088439066.1|205164_205383_+|DUF4492-domain-containing-protein
MNKKSFLYKVFDLYYDGFRSMTLGKTLWLVILVKLFIMFFILKLFFFPNFIKENAKKGNEAKFVETEMLKRN
>NZ_CP024735.1|WP_099995964.1|203487_204975_-|TolC-family-protein
MMRLTLLFSILFTAVPTAFSQETLSLQRCREMALANNRQLAISRVTADIAEHTHKAAKTKYLPRVTGMAGYEHLSREVSLLNDKQKKTLSSLGSATVDKLNGQIGQSISQLVQQGIISAEAAQRLGDVLGNIIAPLSQAGNNIGETIRQGLRTNTKNMYAAGIMVTQPIYMGGGIKAMNDIAAIGEEFAQNDIELKRQTVLFAVDNAYWLIVSLRKKEQLATQYRNLISKLHDNVNKMYDAGVATKADGLKVSVAVNTANLTITEIENGISLAKMALCQLCGLPLDGDLKLEDENTDELSAFTPTNYNDADTAFNARPEVRILQNTVDITKQNTKLIQSFYRPHLALTAGYTITNPNSFNGFEQKFKDVWSIGLVLHVPIWNWGEGKYKVRAARSVTQMAQMELSDVRHKIRLEVEQNRFRLKNANSRLATANKNMASAEENLRVANLGFTEGVMTVTDVMQAQTAWLSAKTAIIDAEIAVRTAQVGLKKALGEL
>NZ_CP024735.1|WP_045166891.1|202388_203375_-|HlyD-family-secretion-protein
MSAKSQHNNILLAILGFATVVVSVAVIGYFTLGKEEEIIQGEVEVSEYRVACKLPGRVSEIRVKEGDYVHKGDVLAVLEIPEVSAQEKVATAAAGATEALSDLSEAPNRQEIITATYKVYQQAITANDIAEKTYGRLLRLYNEGVISAQKRDEAEAAFQTTKSAVDVARAQYELATSGKREETKRAAKKQAQAARSAVDVVKSILKETVQRATSDGEVSTIYPKVGELVGLGSPIMSISMVNDVWTTFNIREDQLNGMRVGTKLKGFLPAFNKDIDLQVTSIKDQGTYAVWKATKANGQYDLKTFQVKAKPIGKFDGLRPGMSVILKK
>NZ_CP024735.1|WP_045166898.1|214645_215074_+|hypothetical-protein
MRILKVLIVGFLMILAAGSASAETAIGIGNFDWRPVMDAIMHVESKGNAKAVNGPHAGILQISKGIVTECNSILKSKGSTKRYTLADRFSPNKSREMFVLFQSRHNVSNNIERAIRMWHGGVNFSKSKTQQYYNRVKKFLKI
>NZ_CP024735.1|WP_099995970.1|215166_216375_-|L-serine-ammonia-lyase
MKSLKEIFRIGKGPSSSHTMGPAHAAEIFARRNPNAKAFEVTLYGSLAATGKGHLTDEAITEVLSEIATVEIVWQAKTVLPYHTNGMRYKAFDAEKQVVDEWVVYSVGGGALSEGKGKDDMFYTTPVYQLSTMKEIQDWCEKNGRGFWEYVDHCEGVEIWEYLHEVWTTMCHAVEEGLENDGVLPGPLNLSRKAGKYYIKAQSYKTSLQSRGLVYAYALAVSEENAAGGTIVTAPTCGSCGVMPAVLYHLYKAHQFSERKILRALATAGLFGNVVKENASISGAEVGCQGEVGVACAMASAAACQLFGGTPSQIEYAAEMGLEHHLGMTCDPVCGLVQIPCIERNAFAACRALDAQLYANFSDGRHHISFDKVVRVMKQTGHDLPSLYKETSEGGLAHDFEW
>NZ_CP024735.1|WP_045166900.1|216643_218683_-|transcription-termination-factor-Rho
MFSKEELLEKDIPELESIAKDLEAEYKKTDDKESIIYAILDRQAMNAGASHPLGTTKRKRTRIAKKDPDKVYTVHGKEGENFDLQKNKPQGVPQQSLFKDMPDEQPVVKEEAAPVTEEEAPKKRGRKKKEETEEAVATAVTEAPEAETPKRKRTTQKATEEPEQTETAAEVQAEAPVEPQIEASVEAETPAEDNAEAIIPEAEFTPNTENTAEGETTNNLIEQLQAKVNAHNEQNEEAANFAADGIWAGDPGDGTDFITVVDIPIEDQGIVPTYDMFDRPTISNDANQPSFYPEMGMQQAAAPAYDFTDIIKANGVLEVMPDGYGFLRSSDYNYLSSPDDVYVPANQIKQNGLKTGDVVECQVRPPREGEKYFPLTTINKINGRVPSEVRDRVSFEHLTPLFPDEKFTLCGDPRTTNLSTRVVDLFSPIGKGQRALIVAQPKTGKTILMKDIANAIAANHPEAYLMMLLIDERPEEVTDMARTVNAEVIASTFDEPAERHVKIAGIVLEKAKRMVECGHDVVIFLDSITRLARAYNTVAPASGKVLTGGVDANALQKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRSLSNKRIFPSVNLVASSTRRDDLLQDKTTIDRMWILRKYIADMNPIEAMNSIHDRMLRTQDNNEFLLSMNG
>NZ_CP024735.1|WP_099995971.1|218838_219882_-|DHH-family-phosphoesterase
MNVNLLSDTEAEQLRQLIAEAEHIVICAHKSPDGDAIGSSLAWKSYLKQIGKTDVTVCMPDAYPDFLQWLPEANTILRYDKHPDRVQQVFDNADLVCCMDFNQYTRVEDMRPTLEGCKAKRILIDHHLEPETNNAITVSNPNMSSTSEMVFYIISQLGGYDGMTKECAQCIYCGMMTDTGGFTYNSTRPEIYFVIGQLLSKGIDKDNIYNRVYHNYSVNALRLRGHIIANKMKVVNELHAAYFTVTKEEMRRFHFIKGDLEGVVNIPQQIKGLKLSISLREDTERPNLVLVSLRSSNGFHCQPMAVQFFNGGGHADASGGKLHCSIEEAEQITLKAILAYQDELKKK
>NZ_CP024735.1|WP_099995972.1|219958_220870_-|nucleotidyltransferase
MKPTLLLLAAGMGSRYGGLKQLDGLGPNGETIMDYSIYDAIKAGFGKIVFIIRKDFEEQFRKQVLAKYEGHIPTEIVFQSIDALPEGFCVPEGREKPWGTNHAVLMAKDVVHEPFCVINCDDFYNRDAFMVIGKFLADLPEGSKNKYAMVGFRVGNTLSENGTVSRGLCSTNEQGHLTTVVERTKIERHGDKVQYMEEDGSWTTVPDNTPTSMNVWGFTPDYLEYSDADFREFLSDPKNIENKKSEYYIPMMVNKLITNGTATVDVLDTTSTWFGVTYPADREGVVARIKQLVADGVYPEKLF
>NZ_CP024735.1|WP_099995975.1|221742_222903_+|replication-initiation-protein
MVTTKKTVTKKTTAATSKPKKGAKAQKAPVKRGISNELIPIEEETWLLQPIAVTMMRHDYSLIQVRILVSIVESLQSILHGILNNKRSPQLDLFKTNELDEDGRMPIKLPFKELGVDPNHYPQLRTSLKMLAAIPVEIPYKTSEGRKYTKATNLCDVYIPEDRSYNKYAILKLDQSVAERLVSLDFGYHRLGKQIVFACKNRYTQRIYMFIESWVDKGRTVIKTLEFRKMLRLENNYKKFSDFCRRVLDPAKQELQELADKGFCDCYFDYEKKYDHGQRGGEPDELVFQIYRAKNKMDAQLEQMNKMQRRQFQQMLIQYFDFTQPNAKDMAERITAELYPLAMQKLMDLRQRFNTTYVKDKAAYTFKSLDQMIKEHEVPNTTVEEV
>NZ_CP024735.1|WP_099995976.1|222943_223453_+|DMP19-family-protein
MIEVKIKDATLRAAVAEGEDAFVQAFINAISAAIGGTLTQDNMQELTPDQITLLGWGYLHEEVMDGGYVQLIHNGYGAFIFKNPFGVAMRNWGLTELYSHLRRTKKAYDKYREQIEKDLSEDDFMALYEQMPEFDDADDDFIVNEEQWTKMVAAYIDDHINDFVVIENE
>NZ_CP024735.1|WP_014708566.1|223445_223925_+|SsrA-binding-protein-SmpB
MNKEEQEIRKKSPVQIRNKKASFEYYFIDTYTAGIVLTGTEIKSIRAGKASLVDSFCFINKGEIWLEGMNISPYFYGSFANHEARRKRKLLLNKREIRRLEEDSKSPGYTIVPTLVFIDQHGRAKVDIALCRGKKEYDKRQTLKEKEDRREMDRAMKRY
>NZ_CP024735.1|WP_014708576.1|224819_226595_+|30S-ribosomal-protein-S1
MANFENVNPLSDFNWDDFENGVTVGGDKEELTKAYDNTLNKIQEHQVVEGEVISIDKKEVVVNIGYKSDGIIPASEFRYNPELKVGDKVEVYVENQEDKSGQLILSHKKARLQKSWVNINEALEADAVIQGYIKSRTKGGMIVDVFGIEAFLPGSQIDVHPIRDYDVFVGKTMEFKVVKINQEFRNVVVSHKALIEAELEAQRKEIISHLEKGQILEGVVKNITSYGVFVDLGGVDGLIHITDLSWGRINDPHEVVELDQKINVVILDFDEEKKRIALGLKQLAPHPWDALDPNLKVGDHVKGKVVVMADYGAFVEIQPGVEGLIHVSEMSWSQHLRSAQEFMKAGDEVEAVVLTLDRDERKMSLGIKQLKEDPWEAIEAKYPVGSKHVAKVRNFTNFGIFVELEEGVDGLIHISDLSWTKKVKHPSEFTQVGADMDVIVLEIDKENRRLSLGHKQLETNPWDTYESIYTPGSTHVGKITESMDKGAVITLNEGGEGFATPKHLVKEDGSQAQLGEELPFVVIEFVKDTKRIILSHSRTFEEVKEEQARRQRTASKKHSEPASQINNVAAGTSLGDLDVLADLKKKMEEGK
>NZ_CP024735.1|WP_099995979.1|227162_228092_+|glucosaminidase-domain-containing-protein
MKRYVLIIIVALTSFGSAIAGPKIRWNQAYQNYFNKYKNIAIREMQRYGIPASITLAQGVLESGAGNSRLATIANNHFGIKCHDWTGPSISHDDDELGECFRVYNNAVESYEDHSKFLRGRKRYSNLFLLSKTDYRGWAHGLKRAGYATNPVYAYSLIDIIELYRLYEYDNMVLRKGNNDWDMPTQPQQNSSYAGMRQFRAFNENCYLTAHAGETYDNIAREIGISAHKLAKYNERPEDAPLNEGEIVWLRKKQRHVPENFGKQYHTVRSNESLYDISQQYGVRLKNIMKANRKIVKRGIKAGDRVVLP

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Crispr_ID: NZ_CP024735_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024735_2

373483-374306

TypeVI-B1,TypeVI-B2

NA:VI-B2

Consensus_repeat	Method
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CRISPRCasFinder
CTGTTTGCAAGGTAAAAACAAC	PILER-CR
CTGTTTGNAAGGTAAAAACAAC	CRT

12 spacers

Csx28,cas13b

The CRISPR arrays of NZ_CP024735_2

>merge|NZ_CP024735|2|373483-374306|CRISPRCasFinder,PILER-CR,CRT
GTGGCATCTGCCTGCTGTTTGAAAGGTAAGAACAACGAGGTCAATTGTGTTTGCGTCTACGTTTTCGTTGCATCTGCCTGCTGTTTGAAAGGTAAAAACAACACGTTCATAATCAGCATCACATCTATATCGTTGCATCTGCCTGCTGTTTGAAAGGTAAAAACAACCCCCTTTCTTTTCATCTCAGAATGTATTGTGTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAACTATATAGTCAATATGGCTTACTTGTTCAGGTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAACATGGGGGCTTTTATTAATTTAGCCCGTATGGTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAACCCTTTGTATTAAAATGCTTAGCGAAATATAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACTGACTGGTTTGCAATATTCGCAGTCTTTACGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACTTCATCTAGCCATTCTTCTATTATCCGAAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACCGTCGAGGTGTAATTCCTGCCATACCATAAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACGGTTATAGCTATATGGATTATGCACCACACGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACCTTTTTTTGGGTGTTTTAGTAAACAACCCGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACCAACACTAACATTGAATAGATACGTGTTAAGTTGCATCTGCCTGCTGTTTGCAAGGCACAAACAAC

>NZ_CP024735|2|2|373483-374306|CRISPRCasFinder
GTGGCATCTGCCTGCTGTTTGAAAGGTAAGAACAAC	GAGGTCAATTGTGTTTGCGTCTACGTTTTC
GTTGCATCTGCCTGCTGTTTGAAAGGTAAAAACAAC	ACGTTCATAATCAGCATCACATCTATATC
GTTGCATCTGCCTGCTGTTTGAAAGGTAAAAACAAC	CCCCTTTCTTTTCATCTCAGAATGTATTGT
GTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAAC	TATATAGTCAATATGGCTTACTTGTTCAG
GTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAAC	ATGGGGGCTTTTATTAATTTAGCCCGTATG
GTTGCATCTGCTTTCTGTTTGAAAGGTAAAAACAAC	CCTTTGTATTAAAATGCTTAGCGAAATATA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	TGACTGGTTTGCAATATTCGCAGTCTTTAC
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	TTCATCTAGCCATTCTTCTATTATCCGAA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CGTCGAGGTGTAATTCCTGCCATACCATAA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	GGTTATAGCTATATGGATTATGCACCACAC
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CTTTTTTTGGGTGTTTTAGTAAACAACCC
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CAACACTAACATTGAATAGATACGTGTTAA
GTTGCATCTGCCTGCTGTTTGCAAGGCACAAACAAC

>NZ_CP024735|2|1|373497-374306|PILER-CR
CTGTTTGAAAGGTAAGAACAAC	GAGGTCAATTGTGTTTGCGTCTACGTTTTCGTTGCATCTGCCTG
CTGTTTGAAAGGTAAAAACAAC	ACGTTCATAATCAGCATCACATCTATATCGTTGCATCTGCCTG
CTGTTTGAAAGGTAAAAACAAC	CCCCTTTCTTTTCATCTCAGAATGTATTGTGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	TATATAGTCAATATGGCTTACTTGTTCAGGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	ATGGGGGCTTTTATTAATTTAGCCCGTATGGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	CCTTTGTATTAAAATGCTTAGCGAAATATAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	TGACTGGTTTGCAATATTCGCAGTCTTTACGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	TTCATCTAGCCATTCTTCTATTATCCGAAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CGTCGAGGTGTAATTCCTGCCATACCATAAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	GGTTATAGCTATATGGATTATGCACCACACGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CTTTTTTTGGGTGTTTTAGTAAACAACCCGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CAACACTAACATTGAATAGATACGTGTTAAGTTGCATCTGCCTG
CTGTTTGCAAGGCACAAACAAC

>NZ_CP024735|2|1|373497-374306|CRT
CTGTTTGAAAGGTAAGAACAAC	GAGGTCAATTGTGTTTGCGTCTACGTTTTCGTTGCATCTGCCTG
CTGTTTGAAAGGTAAAAACAAC	ACGTTCATAATCAGCATCACATCTATATCGTTGCATCTGCCTG
CTGTTTGAAAGGTAAAAACAAC	CCCCTTTCTTTTCATCTCAGAATGTATTGTGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	TATATAGTCAATATGGCTTACTTGTTCAGGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	ATGGGGGCTTTTATTAATTTAGCCCGTATGGTTGCATCTGCTTT
CTGTTTGAAAGGTAAAAACAAC	CCTTTGTATTAAAATGCTTAGCGAAATATAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	TGACTGGTTTGCAATATTCGCAGTCTTTACGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	TTCATCTAGCCATTCTTCTATTATCCGAAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CGTCGAGGTGTAATTCCTGCCATACCATAAGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	GGTTATAGCTATATGGATTATGCACCACACGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CTTTTTTTGGGTGTTTTAGTAAACAACCCGTTGCATCTGCCTG
CTGTTTGCAAGGTAAAAACAAC	CAACACTAACATTGAATAGATACGTGTTAAGTTGCATCTGCCTG
CTGTTTGCAAGGCACAAACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024735.1\|WP_099996040.1\|390159_392115_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
NZ_CP024735.1\|WP_099996033.1\|375124_378145_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP024735.1\|WP_157766857.1\|374530_374971_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099996041.1\|392130_393321_-\|DUF2027-domain-containing-protein	unknown	unknown	gnl\|CDD\|370595
NZ_CP024735.1\|WP_099996038.1\|383729_386018_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP024735.1\|WP_099996036.1\|380653_382852_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP024735.1\|WP_045168272.1\|353482_353947_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP024735.1\|WP_099996037.1\|382975_383593_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP024735.1\|WP_099996031.1\|372853_373414_+\|hypothetical-protein	Csx28	-	unknown
NZ_CP024735.1\|WP_045168265.1\|360609_360900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099996182.1\|389556_390066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_172952437.1\|369471_372849_+\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NZ_CP024735.1\|WP_045168268.1\|354153_354945_-\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_CP024735.1\|WP_099996028.1\|367705_368122_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045168266.1\|358452_360597_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_CP024735.1\|WP_099996029.1\|368298_369192_+\|DUF481-domain-containing-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045168264.1\|360896_361574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_157766261.1\|386625_388659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045168267.1\|355180_357427_-\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP024735.1\|WP_099996035.1\|378983_380501_-\|DUF4301-family-protein	unknown	unknown	gnl\|CDD\|372920

Protein	Function_ID	Function_description	E-value
NZ_CP024735.1\|WP_099996040.1\|390159_392115_-\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NZ_CP024735.1\|WP_099996033.1\|375124_378145_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	5.14511e-05
NZ_CP024735.1\|WP_099996041.1\|392130_393321_-\|DUF2027-domain-containing-protein	gnl\|CDD\|370595	pfam09640, DUF2027, Domain of unknown function (DUF2027). This protein domain is of unknown function. though putatively involved in DNA mismatch repair. It is associated with pfam01713.	5.67944e-68
NZ_CP024735.1\|WP_099996038.1\|383729_386018_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP024735.1\|WP_099996036.1\|380653_382852_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP024735.1\|WP_045168272.1\|353482_353947_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	5.95078e-69
NZ_CP024735.1\|WP_172952437.1\|369471_372849_+\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
NZ_CP024735.1\|WP_045168268.1\|354153_354945_-\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	3.80697e-117
NZ_CP024735.1\|WP_099996037.1\|382975_383593_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.62761e-11
NZ_CP024735.1\|WP_045168266.1\|358452_360597_+\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	8.98977e-08
NZ_CP024735.1\|WP_045168267.1\|355180_357427_-\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP024735.1\|WP_099996035.1\|378983_380501_-\|DUF4301-family-protein	gnl\|CDD\|372920	pfam14134, DUF4301, Domain of unknown function (DUF4301). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 505 and 516 amino acids in length.	0

>NZ_CP024735.1|WP_099996031.1|372853_373414_+|hypothetical-protein
MDCTLISKEVATALFSTISSLIPIVIAAYLTYRYAIKKLRKESFENIERAKYEAVLKAHQSIYKLLRFITDTENDDCILVWEQPKGGGEKTYYFRQANIRKFIKELTEEIYNKGNGIFLSKKVMPLIFEYRSLVYGLLLTAKDKPDETIEIKNEKLAKRMIEIHQSLSIQIRKDINLKQRDLQFDS
>NZ_CP024735.1|WP_172952437.1|369471_372849_+|hypothetical-protein
MEDDKKTTESTNMLDNKHFWAAFLNLARHNVYITVNHINKVLELKNKKDQDIIIDNDQDILAIKTLWEKVNGDLNKTERLRELMTKHFPFLETAIYSKNKEDKEEVKQEKQAKAQSFDSLKHCLFLFLEKLQEARNYYSHYKYSESTKEPMLEKELLKKMYNIFDDNIQLVIKDYQHNKDINPNEDFKHLDRTEEDFNYYFTRNKKGNITASGLLFFVSLFLEKKDAIWMQQKLRGFKDNRESKKKMTHEVFCRRRMLLPKLRLESTQTQDWILLDMLNELIRCPKSLYERLQGEYRKKFNVPFDPADEDYDAEQEPFKNTLVRHQDRFPYFVLRYFDYNEIFTNLRFQIDLGTYHFSIYKKLIGGQKEDRHLTHKLYGFERIQEFAKQNRTDEWKAIVKDLDTYETSNERYISETTPHYHLENQKIGIRFRNGNNDIWPSLETNGENNEKSKYKLDKPYQAEAFLSVHELLPMMFYYLLLKKEEPNNDKKNASIVEGFIKREIRDIYKLYDAFANGEINSEEELKEYLKGKDIEIVHLPKQMIAILESKPKDMVKEAKRKQKEMVKDTKKLLAALEKQTQEEIEDGGRNIRLLKSGEIARWLVNDMMRFQPVQKDNEGNPLNNSKANSTEYQMLQRSLALYNKEEKPTRYFRQVNLINSSNPHPFLKWTKWEECNNILSFYRSYLTKKIEFLNKLKPEDWEKNQYFLKLKEPKTNRKTLVQGWKNGFNLPRGIFTEPIREWFKRHQNDSEEYKKVEALKRVGLVAKVIPLFFKEEYFKEDAQKEINNCVQPFYSFPYNVGNIHKPDEKDFLPSEERKKLWGDKKYKFKGYKAKEKSKKLTDKEKEEYRSYLEFQSWNKFERELRLVRNQDIVTWLLCTELIDKLKVEGLNVEELQKLRLKDIDTDTAKKEKNNILNRIMPMQLPVTVYEIDDSHNIVKDRPLHTVYIEETKTKLLKQGNFKALVKDRRLNGLFSFVDTSSEADLKDKPISKSVVEYELGEYQNARIETIKDMLLLEKTLIKKYKKLPTDNFSDMLNGWLEGKDESDKARFQNDVKLLVAVRNAFSHNQYPMRNRIAFANINPFSLSSANTSEEKKLDIANQLKDKTHKTIEKIIEIEKPIETKE
>NZ_CP024735.1|WP_099996029.1|368298_369192_+|DUF481-domain-containing-protein
MIKEKGLKHPNHNAKNGNMLFRLLALLFQRTHKKSVCVKRCAYVLLCIMASLPAQAQMLFSENLTMSIDSAKTIQGSLQPVVDFKTEKENVLTLKNTANLNLLIKRNRVVNLINKLEFSTYGKEITVSGGYVHAEYRYLLQHAFEVYPYVESQWAGSRGMTFKVSTGLQSRYRLMNTEHSLMFAAIGLFYEFEKWEYPDPPAGTTPHAYSRSVKSHLSLSYRHSLGEHWEITATAIHQAKPDSYFKSARFGGAVDLAYRITPKIGVRGTYRLIYDTAPIVPIRKNYTAVDAGLDISF
>NZ_CP024735.1|WP_099996028.1|367705_368122_-|hypothetical-protein
MKRLFLIGIMALAAVSGFAQDVNRVDKLKEQQKVLDLTSKLNKLQLDLEKEKATYNDLVNKASEVNAEANVVTTEFNSSDAKSTVKDAKETIKVLKEAKAVNKKLKKAQKKTSKIEKKIAKLQARIDDLNKRIKFVDQ
>NZ_CP024735.1|WP_045168264.1|360896_361574_+|hypothetical-protein
MINKCEKTKELQEIFNYNTLISGNKDNSYKIAEIKGRNTCTYCNRQYTITLKEDGEFITRPQFDHWFPKSVFPLLALSFYNLIPSCSICNSSAKGDQIFSFKKLIHPYKRSSPETDFRFSYLPDGKGGWKIDLYNLKGVEKETFEVFKLKDIYNYHYKLEAKNLLDLAVKNNGTYIEWLLNDMKKKEIAPSYEEAYRLLFGTEYDIKKVLDRPFSKLKRDLLYLS
>NZ_CP024735.1|WP_045168265.1|360609_360900_+|hypothetical-protein
MWYLEKPSEKELNTYKELFYKKIKNKIDKDGCFKFLFNKDNTGKDYIEKLLISEPEKLNKLNKKLIKKIFQRNLLKNLKNTKILKERKRRIKMTLI
>NZ_CP024735.1|WP_045168266.1|358452_360597_+|AAA-family-ATPase
MENKTKNSQSNTISATETTNFQLIAIKVNKDKTIGQRKLTANKPYFFSEGYEITNNVLTIKEENKISSNIYNLFIKDEKEQQPSISINAIVGENGSGKSTIVEYVIRLINNLSAAIFGERFSNPAAEHLHYIEGMDGELWCLVDNKAVRLVVNDKKVSLFSYTKDTQEEKFGNETLLLSNEKTDKDSPMENLNPEKLKEFIPSLFYTLVSNYSIYAYNSFDYLDENSSSELERKIRNKDTVDIYERNWLRGIFQKNDGYQTPIVLTPYRDRGNININREKQLSKERLISLLLMDSKYYRTINGHLKVTDLKITKNKENKDENTLKEEELYQVYDNGFDEIKQKIKEFWIEKIDIPKKKIKNGNYEEILTYIVYKTLKIASKYKQYNNIFYNKKNKRKHVRFDKRLFKKLIDKMYKDTSHITKKIRQCLLYLLYNPFDLKSEGETVIKINKAEERIKDYLQKSKELSDKPFFKNVSIDDLLPPPIFSIEIILEDKNKLNSDNVPFNTLSSGERQQTFSISSALYHLANIESVHNDENNERVRYSNALIIFEEVELYFHPQLQKQLIKNLLDGIKQMHFKHIKSIQIIFVTHSPFILSDIPTENILALKKDCTETKELKTFSANIYDILNTSFFMEEGAIGDYAQWIIQFIVKCFEDRHKISPEDLLELISLIDEPLYHKVLMQRFYKKYPNQTPLSKKIEELEMQLDALKKQQNK
>NZ_CP024735.1|WP_045168267.1|355180_357427_-|formate-C-acetyltransferase
MREEWRGFSGTKWLDEVNMREFIQANYTGYDGDAEFLANPTEATNKLWGKLKELQKEERAKGGVLDMETEIVSSATAYGAGYIDESMKDLEKVVGLQTDKPLKRAFMPYGGIKMAEQACTTYGYQPSEKLHEIFTKYCKTHNDGVFDAYTDEMKIVRHNHILTGLPDTYGRGRIVGDYRRVALYGVDFLIEEKQKDLRNCGDGVMVDDIIRLREEISMQIKALYEMKEMAKIYGYDISKPANNAREAVQWLYFGYLSAIKTQNGAAMSVGRISTFLDIYINRDFQEGTLTEAEAQELIDHIVMKFRMVKFARIPSYNQLFSGDPVWATLEVAGLGMDGRHMVTKNDFRFLHTLENMGPSPEPNLTVLYSPALPEGFKKYAAKISVKTSSIQYENDEVMRPVWGDDYSICCCVSATQTGKEMQFFGARANLAKCLTYAISGGVDHKTREQCGPALRPIEGDVVTYEEFMPKFMDMMEWLADIYVNTLNLIHYMHDKYFYEAAELALIDTDVRRTFATGIAGFSHVVDSICAIKYAKVKIVRDETGFPLDFETEGEFPRYGNDDERADEIAVWLLKTFMTMIRKHHTYRNSEPTTSILTITSNVVYGKYTPAMPDGRPSGAPLAPGANPSYGAEQNGLLASLNSVAKLPYEYALDGISNTQTIAPSTLGKDDEERTNTLVGVMDGYFSRGAHHLNVNVFGVEKLIDAMEHPEKEEYANFTIRVSGYAVKFIDLTREQQEDVIARQAHGKM
>NZ_CP024735.1|WP_045168268.1|354153_354945_-|pyruvate-formate-lyase-activating-protein
MTEQIPTIEYNTENTERADGKKLARVHSIESFGSVDGPGIRFIVFLKGCTMRCQYCHNPDTWDTHSDQLMTADELLAKAIRFKSYWGANGGITVSGGESLLQMDFLIEFFRKAKAQGVHTCLDTSAQPFRRTGAFFEKFEELMQYTDLLLFDIKHIDTDEHKKLTGWGNENILDCARYLSEIGKPIWIRHVLVPTITDKDEYLLRLRDFIASLTNVEKIEVLPYHTLGIYKWENLNIPYTLKGIPEPTPEQVQHAQQILEGKA
>NZ_CP024735.1|WP_045168272.1|353482_353947_+|MaoC-family-dehydratase
MEKLIVNNYEELASYLGKKLGESEWLEVNQERINLFADATLDHQWIHVDAERAVKESAYKTTIAHGYLTLSLLPHMWNQTIEVHNLKMMVNYGMDKMRFGRPVLVDSRIRLVSWLESIENLRGICKAGIKFQIEIEGERKPALEGVATFLYYFE
>NZ_CP024735.1|WP_157766857.1|374530_374971_+|hypothetical-protein
MECKIEIMVFLWNYLYKTGVVLRRGKCRGCGVGSGGSTRAALPIVRHWQGWLGLLHRLDAAARSVVLASVDVQRRQESRCTEQDKMFSHIVIICFELACCAEWVLQRAANGRQPSIVPLCKDTHFRRVWGSWEGGIWAWGRRGWWL
>NZ_CP024735.1|WP_099996033.1|375124_378145_-|T9SS-type-A-sorting-domain-containing-protein
MKKHYLLVLFLFFFCGMQADEVKVLEENTFSLAISPNGKYLVGYNPTKVKSGVGTESFLYDVGSGSLKWVTTDDPENWKKCGLFKDVNDAGTLCGSVKDLDHVIDFYGTSAPTNIAAILENGKVVKLPYGDLDMKKIKQHEDGTFAAALSNDGKVVVGYCKCSNFAFSYPCKWTRGANNEWKMEQLPLPESYKYGLAINVSSDGRTIVGLAIEGGRAIACYWIDGKCYTVNCKSEDAELAKMKQMRMIDMSPNGKYFIFSLSSRSDYRLFDVEKGTYRVLPTFERNETMRIPTVADNGDVFGAITYSTAGMGEVSYRSFWYQYSSDRIFDFTYYLYLFNPQLTIPFPLNYEDQAQAFPSAVSANGNVVTGNRDTNIAFGQIPKAWVLNVTKREVEIPATPNKPNGGSTGLHQIQLSWKIDKATYNSLTLKGYNVYCDGKKVAILKELQDEMTFALKDVYAGYRKFAIEAIYTDKQGKEMLSPRSNPTVIAVPDDYSFPLFEDFEKGSLNTNYWTKSKDYGDDADTEWLVAAQVGHDASMGLSTGACTFKPYSSSVISRPLDATKINKVKCSFLILCNQEPAQGGGEVDLTKDTLSVEYTVDGGKSWSVAKEWTVKELPNLEGILTVDLTKHVAGKVFQVRFRKHGKGAVSYYFYLDNIMIGSGDNVDAPKGFTGKVMNNELFLMWKNSRNGYSLNYLSDPESPGYTLGNEGKELIGANKFAQGELAPYHGKYLTSVTSYINYYDDASGDKGIHAAVVVFEDGKLICEQEIENIKYNENTTQKLNQPIKIDSGKELIVGIKIHDYDAEQIPLTYESSKSSVTGKSDLYSEDNGKTWKTVRDFYEDDPQMGSCCWRITGNITDQPNDAIVEEDNTLIGYNVFRNGVQLNNVCIPFEVTRYIDKQPIDKAEYTVVAYYNDGRESFASTSYILDLTNGIAPLVNKSVLSVDKSAIRLNAEGTLRLYSVDGHFVAKSAKGIIPLGNISSGIYIVLVEYNNQRFTQKILINN
>NZ_CP024735.1|WP_099996035.1|378983_380501_-|DUF4301-family-protein
MLTKQDELLLNSKGITLSDFEKQLADFRNGFPFLKIESAATVGNGVVRLKENEVKEFTTAWDNYKAEKHKVVKFVPASGAASRMFKDLFAFLEAAYEVPTTDFEKFFFDNLKHFAFYNELNEKCRATHGKDIAQLVEAGNHKTIVATLLHTDGLNYGQLPKGLLLFHKYAEGERTAMEEHLVEAAQYASCGAEAHVHFTVSHEHLELFKAKAAQKQPMYEENHRTRFSISFSEQKPSTDTVGANPDNTPFRNDDGSLLFRPGGHGALIQNLNDIDADVVFIKNIDNVTPDRLKPETVTWKKVIAGVLVTLQEKTFEYVRKLKAADYTPADLQCMKNFLENDLYCRRKDIDQLNNDELAAYLLEKLNRPMRVCGMVRNSGEPGGGPFYAYNADNTVSLQILESSQIDSNDAESVRMFKEGTHFNPVDLVCATKDYAGKPFDLPQFVDPATGFISSKSKNGKELKALELPGLWNGAMSNWNTVFVEVPAITFNPVKTVNDLLREQHQ
>NZ_CP024735.1|WP_099996036.1|380653_382852_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MIFTDDELKSFHALTEELNEELANDVTEEDKEKLASYIKLMEEKGAMERNVFGLSELLCAMQTSLIAVRNIGLKRDSVLATVLYAGFENGALEIKQIETDFGRSVAQIIQGLARIQNLYKKNPIIESENFRNLLLSFAEDMRVILIMIADRVNLMRQIRDTDNKEAQRQVAEEANYLYAPLAHKLGLYQLKSELEDLSLKYLEHDAYYHIKEKLNETKKARDAYIKEFIEPVSKELQNAGLRFHIKGRTKSIHSIWQKMKKQKCTFEGIYDLFAIRIILDSPTQKEKMQCWQAYSIVTDMYQPNPKRLRDWISVPKSNGYECLHITVLGPNTKWVEVQIRTERMDEVAEHGLAAHWRYKGIQAEEGMDTWLASIRTALEAGDNLEVMTQFKRDLYDKEIYVFTPKGDLLKFPKGATLLDFAYHIHSKIGNQCVGGKINGKNASIRTELHSGDTVEVTTSATQKPKQEWLNIAKSARAKSKIRLALKETQVKEGVYAKEMLERRFKNKKIEIEEQTLFHLIKHLGFKEITEFYKQIADEKLDVNNVIETYQQLYNQTHNQNTQKETESAEKFELADETAELLKNNEDVLVIDQNLKGIDFSLSKCCNPIYGDPIFGFVTVNGGIKIHREDCPNAPELRKRFGYRVVKAKWSGKGGANYSITLRIIGHDDIGIVNNITNVLSKEEKVVMRSINIDSHDGLFSGNLVVLIEDTSKLNALIKKLKNIRGVKQITRL
>NZ_CP024735.1|WP_099996037.1|382975_383593_-|TetR/AcrR-family-transcriptional-regulator
MVIENDYKKEVKAKILQLATTMFFQYGIRKVKMDDIAARLKISKRTLYEIYQNKEDLLYEVVVLNDKRGLEKLEEFDKPGVNVINIIIHVFKLQTEELSRVNPVFLEDIGKYPKLMEYIQNKRKRKRKQVVAFIERGISEGCFLPDINIEIMNTLADASGHYIMSNNLYNKYNIKEIFRTVVLLYIRGICTEKGIRLLDEEMKGF
>NZ_CP024735.1|WP_099996038.1|383729_386018_+|NADP-dependent-malic-enzyme
MVKITKEAALEYHQNGRPGKIEVIPTKSYSTQTDLSLAYSPGVAYPCLEIQENPDNAYKYTDKGNLVAVITNGTAVLGLGNIGAMSGKPVMEGKGLLFKIYGGIDVFDIEIDETDPDKFCEAVEKIAPTFGGINLEDIKAPECFAIEERLKRTLDIPVMHDDQHGTAIISAAGLKNALEVAGKDIAKVQLVVNGAGAAAISCTKLYMALGLKKENILMLDSHGVITTDRPNLTEQKKLFATDRKDVHTLEEAMKGADVFVGLSKGNILSKEMIQSMNDNPIVFALANPVPEISYEDAMAARPDVLMSTGRSDYPNQINNVIGFPYIFRGALDVHAKAINEEMKLAAVHAIAELAKQPVPDIVNEVYHVNDLTFGQKYFIPKPVDPRLITVVSAAVAKAAIDSGVARRQIEDFEAYKDKLMQLLGQETKFTRYLHATAAQHPQRVVFAEGVHQNMLKAAVQAKQEGICQPILLGHPDRIKRVANRLKLDLTGIELIDMRADKEQGRRATYAKHLAEKRAREGYTFDEAYDKMYERNYFGMSMVENGDADAMITGLYTKYSDTIKMAKDVIGIRPEYKHFGTMHILNTKRGIYYIADTLINRMPNTETLVDITRLAHHSVKFFNDNPVMAMVSFSNFGSDEGGSPQQVREALAMTQEAHPDWLIDGEMQINFALDKKLRDEKYPFTRLKGKDVNTLIFPNLASANSAYKLLQGFSPETEVIGPIQMGLNKPIHFTDFECSVRDIVNITAVAAIDAYIEKIKNKL
>NZ_CP024735.1|WP_157766261.1|386625_388659_-|hypothetical-protein
MMTNLLRNSYATFVALFIAMFALPTTTQAQIEYNLAVGGKVVTSDNCKDLSEIDGVSGTVNYEPKTKTLTLQNATIEGDIMYAISSDIYGLKIKVLGTNKINAQAYGIIFSRPTSIIGDGTLEIVGSDESGINTSGNTLTVEGCTLNVKGGKFGIRGYDGNHGEDITVKNAKITAEGTSEGSIGNIASLAMEGCAIIEPVGAAFDESLHGVALNGALVKEKVVIAPASAPVTEYELIIAGTKVNDKNCSNLSEIEGVKGTVKYDPETKTLTLEDATINIEKENAIYSVIDGLTLKVVGNNTLKGTNTAIGFQKPMTITGGGTLDVESTKETAIYAVGTTLVIEDCTINAKGLDCGISGNDGENGEQLTIKNAKVTAEGKEGGSVCDFVTLTMEGCVITEPVGAAFNESLHGVALNGALVKDKVVIGPAPAPITEYELMIAGIKVNEKNCGNLSEIEGVDGTVKYDDETKTLTLENATINVGEKNAIFSVIDGLTLKVVGNNTLKGSEAAIVFSKPMAIAGGGTLNVESTKQTAINAIGTALTIEDCTVNAKGLDCGISGNSGKDEEKLTVKKATVSAEGTNVGSICNLAMLTMEGCAITEPVGADFDESLKGVALNGALVKGKVVITNGATAIGSLTTDTATVKQGIYTLSGVRLSGELSNLPKGVYIVNGKKVVKQ
>NZ_CP024735.1|WP_099996182.1|389556_390066_-|hypothetical-protein
MKRILFTFLLLLIAILGKAQYGNYVQLTAVELLQYQLQKTRKQPATPPFRRYGLRRIRASKYLDDSDPRHIWGWHLQPNEQYEASEPLYKLFQKGDLSSLGIIDTQGAGIEVVFWDKTYYRRFSQQLRNIGFTLSNSPAATNVLQFRKPDTTVQVDVTIWADIYILKIE
>NZ_CP024735.1|WP_099996040.1|390159_392115_-|NAD(+)-synthase
MKYGFIKVATAIPEVRIADTKFNLEAIEKQIVMAEGQGVEIIVFPEFCITGYTCQDLFRQQLLLDDSEHAIMMLLDFTRQLDIIAIVGIPVCVGPLLLNCAAVVQHGKIIGIVPKTYLPNYAEFYEKRWFASARDLCPTQIHYAGQTVLVTPARQIFRTADGVKFGIEICEDIWAPIPPSNALTLAGVEIMFNLSASTEQIGKHRYLEALLAQQSARTISAYVYSSCGFGESSQDVVFGGNAFIYENGTQIAKAERFSLDPQLIIGEIDIEKLRSERRSNTTFANAQKDMYVDPIGGVLPEKTYVNCLPKENTEREFTLTRKINPQPFIQSENMEAACEEVFNIQVTGLARRLLHTNCKTIVIGVSGGLDSTLALLVCVRAFDKLKFDRKGIIGVTMPGFGTSERTHRNAIALMEELGVEIKEISIEPSVVQHLKDIGHDIDVHDSTYENAQARERTQILMDLSNKYGGMVIGTGDLSELALGWCTYNGDHMSMYAVNGSVPKTLVRHLVTYVADLSDNAKVAEALHDIVATPISPELTPADEKGEIQQKTEDIVGPYELHDFFLYYFLRHGFHPSKIYYLAGKAFEGKYTGEEIKKWLYTFVSRFFRHQFKRSCLPDGPKVGTVSLSPRGDWRMPSDANSTNWLAEIEQL
>NZ_CP024735.1|WP_099996041.1|392130_393321_-|DUF2027-domain-containing-protein
MKIGDKVRFLSEVGGGTISGFQGNKIVLVEDEDGFEIPTPINDVVLVSNDDMSEAKIKSLEQTKQEQEEGKSKSIKARLSDHADTAADEKWDEEEEPDYDPADNFVPQPREREGGNTLTAYLAFVPTKPRELNNTDFESYMVNDSNYYIHYIYMVGNGKEWRCKSVGEIEPNTKVFMEQFSYTDLNDLTETCVQLFAYKADKPFERKPALDTRIRIDATKFYKLNTFRENDFFDSPALLYAITEKAKVEETHIEPKLELPKKLQGSNTKNVAPQPQPARKSLERRYENNQSKAKHSKQILKNDKIVVDLHAEEVLETTAGMSAGDILEYQMGIFHATLEQYKNKNQQKIVFIHGKGEGVLRRAILRELNYRYKKYQFQDASFREYGYGATQVTIIT

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Crispr_ID: NZ_CP024735_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024735_3

494332-494421

Orphan

Consensus_repeat	Method
ACTCATCACATTCCTAAAACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024735_3

>merge|NZ_CP024735|3|494332-494421|CRISPRCasFinder
ACTCATCACATTCCTAAAACAAAATATACACAGTAACAACAACAAACAATTAAACGTAAGGGCACGATTCATCACATTCCTAAAACAAAA

>NZ_CP024735|3|3|494332-494421|CRISPRCasFinder
ACTCATCACATTCCTAAAACAAAA	TATACACAGTAACAACAACAAACAATTAAACGTAAGGGCACG
ATTCATCACATTCCTAAAACAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024735.1\|WP_099996076.1\|489875_490667_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP024735.1\|WP_044126392.1\|487860_489084_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP024735.1\|WP_099996082.1\|499508_501242_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP024735.1\|WP_099996085.1\|506157_506496_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045167890.1\|493710_494298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099996075.1\|487358_487826_-\|DUF1896-domain-containing-protein	unknown	unknown	gnl\|CDD\|370228
NZ_CP024735.1\|WP_088439342.1\|504882_505242_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP024735.1\|WP_099995674.1\|503054_503669_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP024735.1\|WP_045167326.1\|485617_486037_-\|PcfK-like-family-protein	unknown	unknown	gnl\|CDD\|379444
NZ_CP024735.1\|WP_099996078.1\|491242_492892_-\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173803
NZ_CP024735.1\|WP_099995673.1\|501267_503022_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP024735.1\|WP_045167325.1\|483881_484919_+\|DUF3800-domain-containing-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045167327.1\|486059_486491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099996187.1\|496925_498536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_099996084.1\|504377_504863_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP024735.1\|WP_036860690.1\|505532_505964_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|133478
NZ_CP024735.1\|WP_099996080.1\|494983_496198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045167356.1\|483021_483483_-\|histidinol-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|375718
NZ_CP024735.1\|WP_154650391.1\|506594_506687_-\|smalltalk-protein	unknown	unknown	unknown
NZ_CP024735.1\|WP_045167328.1\|486843_487191_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024735.1\|WP_045167326.1\|485617_486037_-\|PcfK-like-family-protein	gnl\|CDD\|379444	pfam14058, PcfK, PcfK-like protein. The PcfK-like protein family includes the Enterococcus faecalis PcfK protein, which is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 137 and 257 amino acids in length. There are two completely conserved residues (D and L) that may be functionally important.	6.11319e-46
NZ_CP024735.1\|WP_044126392.1\|487860_489084_-\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	9.83639e-63
NZ_CP024735.1\|WP_099996082.1\|499508_501242_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.5735e-142
NZ_CP024735.1\|WP_099996075.1\|487358_487826_-\|DUF1896-domain-containing-protein	gnl\|CDD\|370228	pfam08989, DUF1896, Domain of unknown function (DUF1896). This domain is found in a set of hypothetical bacterial proteins.	1.07573e-71
NZ_CP024735.1\|WP_088439342.1\|504882_505242_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.8343e-14
NZ_CP024735.1\|WP_099995674.1\|503054_503669_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.71524e-12
NZ_CP024735.1\|WP_099996084.1\|504377_504863_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	3.14712e-39
NZ_CP024735.1\|WP_099995673.1\|501267_503022_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.02546e-132
NZ_CP024735.1\|WP_036860690.1\|505532_505964_+\|transcriptional-repressor	gnl\|CDD\|133478	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators. Ferric uptake regulator (Fur) and related metalloregulatory proteins are iron-dependent, DNA-binding repressors and activators mainly involved in iron metabolism. A general model for Fur repression under iron-rich conditions is that activated Fur (a dimer having one Fe2+ coordinated per monomer) binds to specific DNA sequences (Fur boxes) in the promoter region of iron-responsive genes, hindering access of RNA polymerase, and repressing transcription. Positive regulation by Fur can be direct or indirect, as in the Fur repression of an anti-sense regulatory small RNA. Some members sense metal ions other than Fe2+. For example, the zinc uptake regulator (Zur) responds to Zn2+, the manganese uptake regulator (Mur) responds to Mn2+, and the nickel uptake regulator (Nur) responds to Ni2+. Other members sense signals other than metal ions. For example, PerR, a metal-dependent sensor of hydrogen peroxide. PerR regulates DNA-binding activity through metal-based protein oxidation, and co-ordinates Mn2+ or Fe2+ at its regulatory site. Fur family proteins contain an N-terminal winged-helix DNA-binding domain followed by a dimerization domain; this CD spans both those domains.	4.02167e-33
NZ_CP024735.1\|WP_099996076.1\|489875_490667_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.51652e-53
NZ_CP024735.1\|WP_045167356.1\|483021_483483_-\|histidinol-phosphate-phosphatase	gnl\|CDD\|375718	pfam18291, HU-HIG, HU domain fused to wHTH, Ig, or Glycine-rich motif. Rapidly-diverging family of HU domains predominantly observed in the bacteroidetes lineage with a predicted role in recognition and possible interception of the DNA of parasitic elements, a counter-conflict strategy preventing incorporation of these elements into the host genome.	2.8947e-18
NZ_CP024735.1\|WP_099996078.1\|491242_492892_-\|S8-family-peptidase	gnl\|CDD\|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	6.0303e-87

>NZ_CP024735.1|WP_045167890.1|493710_494298_+|hypothetical-protein
MKQLLLLSFLLLCTPALAQSPTTAERQHLTFCGISLNNTAAAFADSLVAKGFKPETAPLRLPINKANPIFRGRFENIPCIVEVGQNHTEKVDTLRIYLLNVNNPLRSYKILTNFYRSHYGAPIFENYYDTHLLPREAQQQLAADPFITTFSVDGGTVQFSLKYDAQLYNYIYSLLFIDTENALPILSNDDSVIEW
>NZ_CP024735.1|WP_099996078.1|491242_492892_-|S8-family-peptidase
MSSKKNKRFLVTYADYEVSRASAVELLGVNKARMKEGVSFMSGNRVALKDNVLHFESIGVSVLALTSEDARQLATRKGILAVEEDVKMHAFDIKPEGTDAAYKPEAYINQEEMEKFEGTLKALEGARVKSNLCQKGASIETAEPLEMQDEDTIVGNKEVPEAEFLPFNHESFLGKSNLIADSPLDDERQVPSQEGGFADGYKKAMMDIFSTMLDANVKKDTSKSFDSSAASADGLASVKALSPSYIPWNIKMVKAHRAWARGYDGYRVKVAVLDTGIDYNHKDLCVYGGVDFSGSESYMDYNGHGTHCAGIIAAREHRKRIVGVAPRAKLYAVKVLNDQGYGNTSDIIAGMEWCVNNGIQVACMSLGGVHAPSVAYRNAISRCQLNGVLVVAAAGNSANSDFPSVCAPANSAQAKTWSTSPIAVGAVDRRKQIAYFSSRGQKCLPWNPVGCVAPGVNVKSTYLDSEYVEMSGTSMACSHVAGLAALLCQRWNSRDVYKIKKQLLLGTFHSHAYPPSTYMGFGLINCDRVVSIYYVNMFFDRLEEWHLFS
>NZ_CP024735.1|WP_099996076.1|489875_490667_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSKGKLQKFAEMETFKNVFQYPYGVISEVPFDMKGHWREQYFHNDNPIILELGCGKGEYTVGLARLYPNINFIGVDIKGARIYTGAKQALDENLPNVAFLRTSIEIIDRFFATNEVQEIWLTFSDPQMKNPRKRLSSTFFLNRYRNFLEDRGVVHLKTDSNFLFTYTTYLVEKNKLPLLFRTEDLYANETNGVQSTELDPRTKEILGIHTYYENQWIERGLNIKYMKFQLPHEGELAEPDIEIELDDYRSFKRTKRSGKDTAK
>NZ_CP024735.1|WP_044126392.1|487860_489084_-|site-specific-integrase
MKSIFRTVFYLRSNYVNKEGKTPVMLRIYLNNERLCIGSAGVAVEQNQWDSTRERVKGRNTEALSMNLQLDSIQNDLQTIYRKLEMTDDLCLERIKSEYLGRQDNVCTLMQLFEKHNTDIQEQVGVSVSVATLQKYNVCKKHFAAFLNEKYKRCDIRLSELTFTVIHDFDIYLRTTAGQNPNTATKTMKTFKTITILGRKMGVLNHDPFINHHFHLEPVNRGFLTDEEIMKIANKDFGINRLELVRDVFIFSCFTGLAYIDVSNLTPDNIVTLDDKQWIMTKRQKTSVETNVLLLDIPKRIITKYGHKTYRDGKLLPVLTNQKINAYLKEIADLCGIKKRLTFHLARHTFATMSLSKGVPMESVSKMLGHTNIKTTQIYARITNKKIEHDMEELAGKLGKFNTAMGV
>NZ_CP024735.1|WP_099996075.1|487358_487826_-|DUF1896-domain-containing-protein
METTKKELSYFRLKLETYLSEHFPEMLSDKTFITARADEALTTYCDAMAQGFSHPEAEIMASEVLHQGLHFSKYDTLVSVLENEFEKELPSPLPERLSPILLKNKAVQSVFDKYELTDDFGVSPEYEKLYTELTGTIVLLIEVNGLPTIGGENKT
>NZ_CP024735.1|WP_045167328.1|486843_487191_-|hypothetical-protein
MNTIIMNQDIHTPAFIKADASNKTDKIKQQPTSPKQVRRFSWTRFIELTILLSIVIGAIWLISKMVTPQVVTAVSVIAGFLILRFIVRVILRITFTLLSILFWLAIFCAILLCVL
>NZ_CP024735.1|WP_045167327.1|486059_486491_-|hypothetical-protein
MDKQKVNTTSSMNRKGYSSSSHYRINPTAEKSEQVSAIKFVLWDVPSLESLCNSKVYLLRAKLNLGECMSREEKNWLCEAVNSNTYFRTAVPLQGYRFDFFDVLKKYLVNQYGQWTEYYAPDRTSLRTYLYGRINQIVEIPKY
>NZ_CP024735.1|WP_045167326.1|485617_486037_-|PcfK-like-family-protein
MKGTEHFTRTIAEYLNQRAMADPLFAPNLMKPNKNIEECITYILNEMQKSGCNGFDDDEIFSMAVHYYDEDDIEVGKAVSCQVAVNHVVELTEEEKAEARQEAIKQYQREELAKIQSRNARVKKTENIATQVQPSLFDF
>NZ_CP024735.1|WP_045167325.1|483881_484919_+|DUF3800-domain-containing-protein
MEYKTYIDESGNTGSDLLNSSQKIFCLSSVSIPSSQMENLKIYIQEKFESVKEKEEKEIKATKWIKSSKKNRVLQEIVRKMKSVGCDFSAVIIEKRYMLASLIVDNFLDGAYNDNEDYTWCNNKEEKIRAAQYFYDTLNDENCDFILPAFTSPTIENIQEAIHIVIEKTQETRYRTMLEGCHIQELFEEDLAVGKSEAVLRSPNYTAFAALGGMVARNARNKNYQTNIIFDDCLLCNDAYKHIFDIFVQMKSNPVLEDLTGMFSWRDYIRNFSIADSKETLFLQTADVIATSTLKSLMNVFLRQQLNDYEKFIVELLLEMCKTDNLLLVINHRYYDTFINSYCKA
>NZ_CP024735.1|WP_045167356.1|483021_483483_-|histidinol-phosphate-phosphatase
MANRPIAYTLKERKGTVGNLKGKIVVQAHPIGRKRVDHRSFCDEVAHATTFTGAEVEAVLRLAAEIAKKHVENGDIVDFGDIGTLTPSFQSKLVEKGKAEFNPKVHITKPVVHLTPSKKYFTLTGVSYERVSAPDKKSGEEHPNPGPQPEPHP
>NZ_CP024735.1|WP_099996080.1|494983_496198_-|hypothetical-protein
MKQKLCFKKGQSTLYSGIDAGESKEVGFDVELFNFESEETPLLSLMLRAKHIDVSSPIVDNYAFADVDISTVKTVAKVEGGSGTSFILPLSEMDKPYVSTYSTLRVRGVKGYTDDGSEETPRIDLQLYVVGKDEKGNPIVRCVNGFRRNPTDAYCQTPTIPADTTLDILDVALPEKQDIVPPDSVKPIPVEVYLQKRGINNSMLKRSIDEYEHAVRKLKRATNRTLWIGRKGKMSVDKDTGMQKVNFTEGIRWAIKREITNPFKWTCEVFISWLKMFFAGGGKPIEPICLCGSNFLENIQCLDFSKYPGIKIMFVTNRLGWKVAKIRTPFGDLEVKYDPSLDEIGYSNSAAILDFGRLVHYVYSKECSDAAETNENDAKNSSVIIYEALALEGNSHIFIDCEEG
>NZ_CP024735.1|WP_099996187.1|496925_498536_-|hypothetical-protein
MMRKLFLLFLLAVLYCSMGMATNEYDELDHLIGQRKAITDKKLSQINDIRQRLSTPYLTDKQRYKICMQLYDEYEAFRFDSALVYANRTIMYAKRVGDPKWIVEAQLKKVHVYTLAALFLESRELLDTLSTAVLDDRLRQDYYKEWFLLMMFMSEFTAGTQMHKYYDKQADYYSALILKSPYKDTRTYIMVKANDLSEQGNTDEAIAMLKEYLQKLQRHEHEYAMITSELARLYGKLGNTDKQYFYLIESAMSDIRSSAKENNSLRLLATLLFEKGDVERAYKYLNISIEDANFYGTHLRNSQNSRILPRILSVYLVQKRAQSRRITILLAVVSLVAIALVVAILFILKLLKRYRKMNKRVVVMNHQLNEAVENLSKVNAQISETNSIKEEYIARFLELVSKFIDRVDERRKIYSRLAREKRMEELYSELKNSDFIQTATRHYYINFDTAFLNIYPNFVTEVNQLLRPDGQIEPKGDERLTTELRILALIRLGITDNARISSILRASLTTVYTYRSKLKARALDHDGFENAVKKIG
>NZ_CP024735.1|WP_099996082.1|499508_501242_-|ABC-transporter-ATP-binding-protein
MIKYLQQRFALTEKGAKDLRKGIAFSTLMNLALMLPPTYLFFFLMEYIDAKPSTDPHTLWFYVPVALLLAVLMFFIALRQYDSTYTTVYNESAQRRIGVAEKLRRLPLAFFGERNLSDLTSTVMEDCTMLEQTFSHAVPQLFASALSVVIIAVGMFSYNWHLALALFWVVPLAVTTLLLSRRQLHKAFVQHYKVKRGVTEQIQEGLECMQEIRSYSGEQAYCRSFDKRLKGYERELVRGELVAGVFLNLAGMLLKLGMPTVILVGAWLLQQGEVSVFTYLAYLLASAMVYNPIIEVCNYLALLSFLDVRINRMKEIEGMPTQEGSAAVQLENYDIEFRNVSFAYETEKQVLHNVSFTARQGTVTALVGPSGGGKSTTAKLAARFWDIANGQILVGGNDISKIDPETLLKHYSIVFQDVLLFNASIADNIRIGKRNATDEEVRHAARLAQCDDFISRMPQGYDTVIGENGETLSGGERQRISIARALLKNAPIILLDEATASLDAENETKIQAGISELVRNKTVIIIAHRMRTVRNADHIVVLSGGTVSEQGTPDELLARNGEFAHMVRLQQERGNSL
>NZ_CP024735.1|WP_099995673.1|501267_503022_-|ABC-transporter-ATP-binding-protein
MIRILKRLGRYMGGRKPLLPCSVVLSAVNGLLSLVPFIFLWLVVRTLLTADGDLADTPVWDYAIAAFVVSVANVLLYFAALMLSHLSAFRIETNMRRTAMERLMRVPLGFFDTQNTGRMRKIIDEDSSQTHTFVAHILPDVAGSVVAPIGIIVLLLAVDWQLGIAAMVPIVCAFGIMGYMMNPKNNDFQRMYLDAQEKMSAEAVEYVRGIPVVKVFQQTVFSFKRFHDSIINYRDLVIRYTLLWRTPMSAYTIAINAFAFLLVPTGIILIGHGGETAIIVSDMVLYVLIAPIIAANVMKAMHLSENLFLANEAVDRLEKLTATPPLSESSKPEKAEAFNVRLRNVSFRYEAAERDAVSHIDLDIPQGKTVALVGASGSGKTTIARLIPRFWDVREGSLKIGGVDVRHMDKAVLMRNVSFVFQNTRLFKTSILENIRYGNPDATIEQVNRAVDLSQSREIIERLPQGLDTVIGAEGTYLSGGEQQRIVLARAILKDAPIVVLDEATAFADPENEHLIRQAFVHLTCGKTVLMIAHRLTTVQDADNIAVVDNGRIAEQGTHQQLMEQATLYYKMWNEYQKSVAWKL
>NZ_CP024735.1|WP_099995674.1|503054_503669_-|TetR/AcrR-family-transcriptional-regulator
MQTLKDDIRQRIVAVAREEFIAHGARSTSIRTVARRAGIAAGNVYNYFRSKDELFCEVLRPLLNELNRYILSHNEERHLSIEVFDALDFQNEYIGAMKRMVRLYRPELRLLLFNAEGTSLAGYKERIAEHQLKAGTEYLRLMKARYPHINIDISPFFLHIASSMWVNIFCELVEHEEYDESEVNRALEQYAAYSMAGWRELMKP
>NZ_CP024735.1|WP_099996084.1|504377_504863_+|thioredoxin
MKTRIFVAVAAVAFTLSSCNTSAKNKTENNKQATAQTKKENKMKTIEMNEAMFKEKVMDYATAGDAWNFKGDKPAIIDFYATWCGPCKATAPILEEIAQEYDGKIDVYKVDVDKNQELSALFNIRSIPSLLFVPKEGKPTMSVGAHPKAELERMIKETLLK
>NZ_CP024735.1|WP_088439342.1|504882_505242_+|MarR-family-transcriptional-regulator
MDNNCIHKMHNIFRAVVEFERALETTFGMNINELMLLCMLANKESLLAGEIANEMGLTRSNASKVIASLERKGYLERRTCKHDSRCQRCSITAQGREQMEHVNCESFPPPPNLAAFINP
>NZ_CP024735.1|WP_036860690.1|505532_505964_+|transcriptional-repressor
MYIDPAYQKLLDCGIRPSLQRIEIMRYLQTHKTHPTIDDIYVELKKRIPSVSRTTIYNTLRMFSEKGGALMITIDEHRVCYDGCTTPHAHFCCKECGHVFDLPDMQPPAPQSPSIDGFRIDDAQLYYKGICPECLGKKAENLS
>NZ_CP024735.1|WP_099996085.1|506157_506496_+|hypothetical-protein
MLQTQLVTPYLKENDTIQKQTAQLCLKLNPPERRYHKTTERQRKRHRHAAIFPFRRHRPPNVSQLADIHSLSVAPNLLVCRLLLPQMSAATYYFVGSCAQNVLNIKLLHTLK
>NZ_CP024735.1|WP_154650391.1|506594_506687_-|smalltalk-protein
MKKEKWKFIVQLFLSVLSAIATTLGMGSCM

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024735_1	1.1\|214251\|27\|NZ_CP024735\|CRISPRCasFinder	214251-214277	27	NZ_CP024734.1	223030-223056	2	0.926

1. spacer 1.1|214251|27|NZ_CP024735|CRISPRCasFinder matches to position: 223030-223056, mismatch: 2, identity: 0.926

tgcagctatatcttatgcaaaggtatt	CRISPR spacer
tgtagctatatcttatgcaaagatatt	Protospacer
**.*******************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024735_2	2.2\|373585\|29\|NZ_CP024735\|CRISPRCasFinder	373585-373613	29	MK250016	Prevotella phage Lak-A1, complete genome	130684-130712	6	0.793
NZ_CP024735_2	2.7\|373913\|30\|NZ_CP024735\|CRISPRCasFinder	373913-373942	30	NZ_CP030786	Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence	35130-35159	6	0.8
NZ_CP024735_2	2.1\|373519\|30\|NZ_CP024735\|CRISPRCasFinder	373519-373548	30	NZ_AP019800	Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence	204273-204302	7	0.767
NZ_CP024735_2	2.5\|373781\|30\|NZ_CP024735\|CRISPRCasFinder	373781-373810	30	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	346824-346853	7	0.767
NZ_CP024735_2	2.5\|373781\|30\|NZ_CP024735\|CRISPRCasFinder	373781-373810	30	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	346824-346853	7	0.767
NZ_CP024735_2	2.5\|373781\|30\|NZ_CP024735\|CRISPRCasFinder	373781-373810	30	NC_023026	Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence	33440-33469	7	0.767
NZ_CP024735_2	2.4\|373716\|29\|NZ_CP024735\|CRISPRCasFinder	373716-373744	29	NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	234768-234796	8	0.724
NZ_CP024735_2	2.6\|373847\|30\|NZ_CP024735\|CRISPRCasFinder	373847-373876	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	464586-464615	8	0.733
NZ_CP024735_2	2.11\|374176\|29\|NZ_CP024735\|CRISPRCasFinder	374176-374204	29	AP014427	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, * SEQUENCING IN PROGRESS *, 3 ordered pieces	5336-5364	8	0.724
NZ_CP024735_2	2.11\|374176\|29\|NZ_CP024735\|CRISPRCasFinder	374176-374204	29	AP013721	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, * SEQUENCING IN PROGRESS *	12309-12337	8	0.724
NZ_CP024735_2	2.11\|374176\|29\|NZ_CP024735\|CRISPRCasFinder	374176-374204	29	LR214966	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12	37233-37261	8	0.724

1. spacer 2.2|373585|29|NZ_CP024735|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 6, identity: 0.793

acgttcataatcagcatcacatctatatc	CRISPR spacer
ataaacataatcatcatcacatttatatc	Protospacer
*..  ******** ********.******

2. spacer 2.7|373913|30|NZ_CP024735|CRISPRCasFinder matches to NZ_CP030786 (Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tgactggtttgcaatattcgcagtctttac	CRISPR spacer
ggaaggattagcaatatttgcagtctttac	Protospacer
 **  *.** ********.***********

3. spacer 2.1|373519|30|NZ_CP024735|CRISPRCasFinder matches to NZ_AP019800 (Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence) position: , mismatch: 7, identity: 0.767

gaggtcaattgtgtttgcgtctacgttttc	CRISPR spacer
attgtcaattgtgtttgggtcaacgttata	Protospacer
.  ************** *** ***** *

4. spacer 2.5|373781|30|NZ_CP024735|CRISPRCasFinder matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
atgggggattttattaatttagatgaaagg	Protospacer
******* ************** . . * *

5. spacer 2.5|373781|30|NZ_CP024735|CRISPRCasFinder matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
atgggggattttattaatttagatgaaagg	Protospacer
******* ************** . . * *

6. spacer 2.5|373781|30|NZ_CP024735|CRISPRCasFinder matches to NC_023026 (Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence) position: , mismatch: 7, identity: 0.767

atgggggcttttattaatttagcccgtatg	CRISPR spacer
ttggtcttttttattaatttagctcgtatc	Protospacer
 ***   .***************.*****

7. spacer 2.4|373716|29|NZ_CP024735|CRISPRCasFinder matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 8, identity: 0.724

tatatagtcaatatggcttacttgttcag	CRISPR spacer
acctccgtcaatatggcttacattttcag	Protospacer
  . . *************** * *****

8. spacer 2.6|373847|30|NZ_CP024735|CRISPRCasFinder matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

cctttgtattaaaatgcttagcgaaatata	CRISPR spacer
ggtatgtattaaaatacttagctaaattac	Protospacer
  * ***********.****** ****

9. spacer 2.11|374176|29|NZ_CP024735|CRISPRCasFinder matches to AP014427 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tttttttttggtgttttagtaaaaccttt	Protospacer
.******* **************   ...

10. spacer 2.11|374176|29|NZ_CP024735|CRISPRCasFinder matches to AP013721 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tttttttttggtgttttagtaaaaccttt	Protospacer
.******* **************   ...

11. spacer 2.11|374176|29|NZ_CP024735|CRISPRCasFinder matches to LR214966 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12) position: , mismatch: 8, identity: 0.724

ctttttttgggtgttttagtaaacaaccc	CRISPR spacer
tgatttttggatgttttagtaatcaagga	Protospacer
.  *******.*********** ***

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr_ID: NZ_CP024735.1|WP_045167326.1|485617_486037_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP024735.1|WP_045167326.1|485617_486037_-|PcfK-like-family-protein

485617_486037_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

2. NZ_CP024734

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

954523 : 1010610

Cellulophaga_phage(16.67%)

integrase,transposase,protease,tRNA

attL 986470:986501|attR 1003595:1003626

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099995082.1\|954523_955447_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_100027434.1\|955548_955932_+	hypothetical protein	NA	NA	NA	NA
WP_045167664.1\|956156_957491_+\|integrase	tyrosine-type recombinase/integrase	S0A5Q5	Cellulophaga_phage	3.9e-18	24.5
WP_099995506.1\|957503_958499_+	hypothetical protein	NA	NA	NA	NA
WP_045167662.1\|958584_958818_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045167661.1\|958905_959514_+	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_045167660.1\|959546_961091_+	hypothetical protein	NA	NA	NA	NA
WP_045167659.1\|962027_962348_+	hypothetical protein	NA	NA	NA	NA
WP_099995504.1\|962851_963697_-\|transposase	transposase	NA	NA	NA	NA
WP_045167658.1\|964029_964782_+	SIMPL domain-containing protein	NA	NA	NA	NA
WP_045167657.1\|965305_967417_+	hypothetical protein	NA	NA	NA	NA
WP_045167656.1\|967969_968338_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_045167655.1\|968419_969868_+	TonB family protein	NA	NA	NA	NA
WP_045167654.1\|970350_972249_+	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_099995503.1\|972266_973274_+	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_099995502.1\|973616_974750_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_099995501.1\|974779_975652_+	succinate--CoA ligase subunit alpha	NA	NA	NA	NA
WP_099995900.1\|976295_976844_+	hypothetical protein	NA	NA	NA	NA
WP_099995500.1\|976904_978968_+\|tRNA	methionine--tRNA ligase	K7Y9Y6	Megavirus	2.1e-79	32.2
WP_099995499.1\|979530_980301_+	HmuY family protein	NA	NA	NA	NA
WP_099995498.1\|980445_981663_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_014709319.1\|981851_982646_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_172952416.1\|982898_985415_+	TonB-dependent receptor	NA	NA	NA	NA
WP_099983701.1\|985584_986166_-	YkgB family protein	NA	NA	NA	NA
986470:986501	attL	NA	NA	NA	NA
WP_099995496.1\|987817_988249_-	hypothetical protein	NA	NA	NA	NA
WP_045167643.1\|988608_989070_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_099995495.1\|989074_990043_-	toprim domain-containing protein	NA	NA	NA	NA
WP_045168315.1\|990223_991660_-	virulence-associated protein E	D3W0G0	Lactococcus_phage	7.5e-15	31.3
WP_099995899.1\|992135_992426_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099995494.1\|992422_992728_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099995493.1\|993768_994395_+	Vat family streptogramin A O-acetyltransferase	NA	NA	NA	NA
WP_045168299.1\|994608_994992_+	VOC family protein	NA	NA	NA	NA
WP_157766254.1\|995921_996635_+	hypothetical protein	NA	NA	NA	NA
WP_099995491.1\|996692_997505_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_099995199.1\|997624_998029_-	hypothetical protein	NA	NA	NA	NA
WP_045168326.1\|998025_999270_-\|integrase	site-specific integrase	A0A0K1Y646	Mycobacterium_phage	2.7e-05	24.3
WP_099995198.1\|999282_1000512_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.6e-26	37.5
WP_157766253.1\|1001306_1003229_+	Omp28-related outer membrane protein	NA	NA	NA	NA
WP_172952428.1\|1004147_1006328_+	adhesin	NA	NA	NA	NA
1003595:1003626	attR	NA	NA	NA	NA
WP_044047678.1\|1006337_1006544_+	hypothetical protein	NA	NA	NA	NA
WP_045166433.1\|1007027_1007903_+	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_099995488.1\|1007914_1008487_+	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_014709303.1\|1009068_1009344_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.9e-15	52.8
WP_099995485.1\|1009653_1010610_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

DBSCAN-SWA_2

1082597 : 1144072

Staphylococcus_phage(18.75%)

integrase,transposase,tRNA

attL 1115474:1115492|attR 1138095:1138113

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099995443.1\|1082597_1083842_-\|integrase	site-specific integrase	G1JX48	Mycobacterium_phage	4.7e-05	24.2
WP_099995442.1\|1083907_1085137_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	8.6e-28	34.3
WP_099995440.1\|1085733_1087026_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.4e-105	49.0
WP_099995439.1\|1087032_1087989_+	DUF4271 domain-containing protein	NA	NA	NA	NA
WP_088438548.1\|1087995_1088745_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_045166475.1\|1088805_1089249_+	ribonuclease P protein component	NA	NA	NA	NA
WP_080889337.1\|1089245_1089494_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.5e-16	62.3
WP_045166476.1\|1089566_1090865_+\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	1.5e-70	39.1
WP_099995438.1\|1091053_1092913_+	DUF3413 domain-containing protein	NA	NA	NA	NA
WP_099995437.1\|1093339_1094638_-	hypothetical protein	NA	NA	NA	NA
WP_045166480.1\|1094634_1095120_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_099995436.1\|1095726_1097388_-	nucleoside kinase	NA	NA	NA	NA
WP_099995435.1\|1097480_1099190_+	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_028905495.1\|1099241_1100087_+	dihydropteroate synthase	NA	NA	NA	NA
WP_014709245.1\|1100127_1100904_+	TIGR00159 family protein	NA	NA	NA	NA
WP_099995434.1\|1101355_1103380_-	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	1.6e-84	31.5
WP_045166510.1\|1103573_1103936_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_099995433.1\|1104014_1104851_-	hypothetical protein	NA	NA	NA	NA
WP_099995432.1\|1104893_1105628_-	DUF2807 domain-containing protein	NA	NA	NA	NA
WP_014709242.1\|1105640_1106468_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-17	28.6
WP_028905498.1\|1106858_1107338_+	arginine repressor	NA	NA	NA	NA
WP_099995431.1\|1107962_1109192_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.5e-29	34.7
WP_004339693.1\|1110952_1111369_+	hypothetical protein	NA	NA	NA	NA
WP_004339692.1\|1111420_1111819_+	hypothetical protein	NA	NA	NA	NA
WP_004338288.1\|1111815_1113879_+	AAA family ATPase	NA	NA	NA	NA
WP_004338289.1\|1113866_1114175_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004352710.1\|1114550_1115504_+	Abi family protein	A3QSC6	Clostridium_virus	6.9e-25	28.7
1115474:1115492	attL	NA	NA	NA	NA
WP_004352691.1\|1115545_1121764_-	N-6 DNA methylase	A0A248SL14	Klebsiella_phage	6.3e-127	28.7
WP_004338303.1\|1121857_1123942_-	type IA DNA topoisomerase	A0A076FM50	Aureococcus_anophage	1.9e-19	24.8
WP_004338306.1\|1123963_1125367_-	DUF3945 domain-containing protein	NA	NA	NA	NA
WP_004338308.1\|1125799_1126312_-	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA
WP_099995430.1\|1127930_1128467_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004352700.1\|1130263_1132729_-	hypothetical protein	NA	NA	NA	NA
WP_004339688.1\|1132752_1132926_-	hypothetical protein	NA	NA	NA	NA
WP_004292844.1\|1133889_1134825_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_050749437.1\|1134966_1136049_+\|integrase	site-specific integrase	B9UDL9	Salmonella_phage	1.1e-07	24.3
WP_004353653.1\|1136207_1137788_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	9.1e-06	23.6
WP_004353655.1\|1137794_1138583_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.1e-36	34.9
1138095:1138113	attR	NA	NA	NA	NA
WP_002560998.1\|1139269_1141195_+	tetracycline resistance ribosomal protection protein Tet(Q)	A0A1S5SF82	Streptococcus_phage	2.2e-139	40.8
WP_004353651.1\|1141194_1142328_+	histidine kinase	NA	NA	NA	NA
WP_004353653.1\|1142491_1144072_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	9.1e-06	23.6

DBSCAN-SWA_3

1622650 : 1706842

Bacillus_phage(16.67%)

integrase,protease,transposase,tRNA

attL 1671114:1671131|attR 1712655:1712672

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045167578.1\|1622650_1624051_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_099995223.1\|1624104_1625259_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_045167580.1\|1625268_1625790_-	16S rRNA processing protein RimM	NA	NA	NA	NA
WP_028906341.1\|1625802_1627116_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_045167581.1\|1627120_1627723_-	DUF4290 domain-containing protein	NA	NA	NA	NA
WP_045167582.1\|1627776_1628469_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014708882.1\|1629087_1629876_+	hypothetical protein	NA	NA	NA	NA
WP_099995222.1\|1630176_1630947_+	hypothetical protein	NA	NA	NA	NA
WP_099995221.1\|1631096_1632947_-	glycoside hydrolase family 13 protein	NA	NA	NA	NA
WP_099995220.1\|1632956_1634870_-	type I pullulanase	NA	NA	NA	NA
WP_099995219.1\|1634929_1637131_-	glycoside hydrolase family 97 protein	NA	NA	NA	NA
WP_099995218.1\|1637206_1639900_-	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_099995217.1\|1640565_1641786_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_099995216.1\|1641961_1642843_-	carbohydrate kinase	NA	NA	NA	NA
WP_097551034.1\|1642854_1644009_-	MFS transporter	NA	NA	NA	NA
WP_099995215.1\|1644026_1645925_-	GH32 C-terminal domain-containing protein	S6ATV4	Bacillus_phage	2.2e-59	32.0
WP_099995214.1\|1645951_1648270_-	TonB-dependent receptor	NA	NA	NA	NA
WP_099995213.1\|1648606_1651255_+	substrate-binding domain-containing protein	Q6XM27	Feldmannia_irregularis_virus	9.9e-13	24.2
WP_099995212.1\|1652010_1652892_+	hypothetical protein	NA	NA	NA	NA
WP_045167595.1\|1653022_1653469_-	hypothetical protein	NA	NA	NA	NA
WP_045167596.1\|1653665_1654169_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_045167597.1\|1654165_1654897_+	hypothetical protein	NA	NA	NA	NA
WP_045167598.1\|1654893_1655808_+	hypothetical protein	NA	NA	NA	NA
WP_028906361.1\|1655895_1656264_+	DNA topoisomerase II	NA	NA	NA	NA
WP_099995210.1\|1662326_1664012_+	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	5.1e-39	25.3
WP_080889525.1\|1665351_1665861_-	hypothetical protein	NA	NA	NA	NA
WP_172952406.1\|1667654_1668815_-	OmpA family protein	NA	NA	NA	NA
WP_045168102.1\|1668985_1670833_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	6.6e-56	29.3
WP_045168103.1\|1670846_1671119_-	hypothetical protein	NA	NA	NA	NA
1671114:1671131	attL	NA	NA	NA	NA
WP_045168104.1\|1671134_1673078_-	hypothetical protein	NA	NA	NA	NA
WP_045168105.1\|1673074_1674508_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_099995880.1\|1674524_1675907_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_099995209.1\|1676063_1677548_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-99	42.4
WP_097549744.1\|1678390_1680574_-	DNA helicase RecQ	A0A2K9L021	Tupanvirus	7.2e-86	38.9
WP_099995208.1\|1680668_1681901_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.6e-114	51.7
WP_014708844.1\|1681904_1682570_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.8e-41	46.6
WP_099995207.1\|1683404_1684847_-	trigger factor	NA	NA	NA	NA
WP_061868644.1\|1685110_1686778_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_099995205.1\|1687397_1688417_-	S41 family peptidase	NA	NA	NA	NA
WP_099995204.1\|1688416_1689235_-	DUF3316 domain-containing protein	NA	NA	NA	NA
WP_099995203.1\|1689242_1692080_-	DNA gyrase/topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	2.0e-40	29.5
WP_099995202.1\|1692757_1694308_+\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	4.1e-43	30.7
WP_172419443.1\|1694334_1695027_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_099995201.1\|1695102_1696560_+	MATE family efflux transporter	NA	NA	NA	NA
WP_014708853.1\|1696595_1697231_+	DedA family protein	NA	NA	NA	NA
WP_099995082.1\|1697501_1698425_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_099995200.1\|1698532_1698823_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005845322.1\|1698819_1699125_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007367849.1\|1699229_1700135_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_006949223.1\|1700254_1700707_+	cupin domain-containing protein	NA	NA	NA	NA
WP_045168305.1\|1700720_1701485_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_099995199.1\|1702623_1703028_-	hypothetical protein	NA	NA	NA	NA
WP_045168326.1\|1703024_1704269_-\|integrase	site-specific integrase	A0A0K1Y646	Mycobacterium_phage	2.7e-05	24.3
WP_099995198.1\|1704281_1705511_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.6e-26	37.5
WP_099995082.1\|1705918_1706842_+\|transposase	IS982 family transposase	NA	NA	NA	NA
1712655:1712672	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP024734.1|WP_096404918.1|40412_40829_-|PcfK-like-family-protein

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Acr_ID: NZ_CP024734.1|WP_014709399.1|119665_120082_-|PcfK-like-family-protein

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Acr_ID: NZ_CP024734.1|WP_004338372.1|1166715_1167135_-|PcfK-like-family-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP024734.1|WP_096404918.1|40412_40829_-|PcfK-like-family-protein

40412_40829_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

NZ_CP024734.1|WP_014709399.1|119665_120082_-|PcfK-like-family-protein

119665_120082_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5815602836879432	1	1.0

NZ_CP024734.1|WP_004338372.1|1166715_1167135_-|PcfK-like-family-protein

1166715_1167135_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.6028368794326241	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024735

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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2. NZ_CP024734

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information