CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024797	Bacillus velezensis strain TJ02 chromosome, complete genome	0 crisprs	csa3,DinG,casR,cas3,DEDDh	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

153684 : 219835

Bacillus_phage(43.18%)

tRNA,terminase,integrase,tail,plate,holin,capsid,portal

attL 166798:166817|attR 220802:220821

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076425820.1\|153684_154428_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_003225844.1\|154587_155025_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_003225846.1\|155045_155438_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_007410414.1\|155575_156343_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_025284101.1\|156356_156830_-	DUF664 domain-containing protein	NA	NA	NA	NA
WP_011996201.1\|156960_157404_+	DUF2521 family protein	NA	NA	NA	NA
WP_007410417.1\|157464_158178_+	N-acetylmuramoyl-L-alanine amidase CwlD	NA	NA	NA	NA
WP_007410418.1\|158257_159310_+	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_007410419.1\|159342_159900_-	hypothetical protein	NA	NA	NA	NA
WP_007410420.1\|160007_160604_+	KinB signaling pathway activation protein	NA	NA	NA	NA
WP_007410421.1\|160604_161369_-	polysaccharide deacetylase family sporulation protein PdaB	NA	NA	NA	NA
166798:166817	attL	NA	NA	NA	NA
WP_069013509.1\|166902_168117_-\|integrase	site-specific integrase	A0A0K2CZ62	Paenibacillus_phage	5.6e-72	39.2
WP_025284104.1\|168103_168634_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	1.6e-34	48.4
WP_100001110.1\|168713_169322_-	hypothetical protein	O64079	Bacillus_phage	4.0e-50	68.8
WP_025284106.1\|169554_169881_-	helix-turn-helix transcriptional regulator	O64078	Bacillus_phage	2.6e-16	46.7
WP_053285433.1\|170040_170274_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_025284108.1\|170341_170536_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025284109.1\|170631_170889_+	helix-turn-helix domain-containing protein	S5MNZ7	Brevibacillus_phage	1.1e-17	57.0
WP_100001111.1\|170890_171169_+	hypothetical protein	NA	NA	NA	NA
WP_069013506.1\|171495_171690_+	hypothetical protein	NA	NA	NA	NA
WP_069013505.1\|171802_171988_+	hypothetical protein	NA	NA	NA	NA
WP_100001112.1\|171984_173973_+	hypothetical protein	A0A1L2K2K3	Aeribacillus_phage	7.9e-156	48.3
WP_100001113.1\|173969_174221_+	hypothetical protein	NA	NA	NA	NA
WP_069013502.1\|174213_174954_+	phage recombination protein Bet	A8ATK8	Listeria_phage	3.9e-68	59.8
WP_100001114.1\|174950_175652_+	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	4.1e-91	67.0
WP_100001115.1\|175852_176608_+	hypothetical protein	U5Q085	Bacillus_phage	7.7e-11	30.4
WP_088462023.1\|176613_176895_+	hypothetical protein	NA	NA	NA	NA
WP_100001116.1\|176869_178168_+	replicative DNA helicase	Q38152	Bacillus_phage	9.5e-94	44.7
WP_069013496.1\|178452_178911_+	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	9.2e-52	66.9
WP_100001119.1\|178880_179573_+	hypothetical protein	NA	NA	NA	NA
WP_100001121.1\|179880_180132_+	DUF3850 domain-containing protein	A0A059T699	Listeria_phage	1.3e-18	62.2
WP_100001124.1\|180124_180400_+	hypothetical protein	NA	NA	NA	NA
WP_069013491.1\|180471_180675_+	hypothetical protein	NA	NA	NA	NA
WP_100001126.1\|180713_180935_+	hypothetical protein	A0A0M3ULE9	Bacillus_phage	5.3e-05	39.7
WP_100001128.1\|180982_181312_+	hypothetical protein	NA	NA	NA	NA
WP_069013006.1\|181308_181566_+	hypothetical protein	F8WQ54	Bacillus_phage	1.2e-05	42.3
WP_100001131.1\|181609_181972_-	hypothetical protein	NA	NA	NA	NA
WP_100001133.1\|182080_182515_+	hypothetical protein	A0A2H4J8A0	uncultured_Caudovirales_phage	3.8e-47	67.9
WP_100001135.1\|182615_183002_+	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	1.3e-30	59.3
WP_100001140.1\|183761_184106_+	structural protein	Q38579	Bacillus_phage	5.2e-31	62.3
WP_100001142.1\|184169_184643_+	hypothetical protein	NA	NA	NA	NA
WP_100001144.1\|184698_185970_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	1.0e-92	44.9
WP_100001146.1\|186104_186353_+	hypothetical protein	A8ATN7	Listeria_phage	7.8e-05	36.5
WP_100001149.1\|186445_187483_+	hypothetical protein	NA	NA	NA	NA
WP_100001151.1\|187516_188398_+\|terminase	terminase	D2J000	Enterococcus_phage	1.0e-35	42.2
WP_100001153.1\|188397_189744_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	6.5e-154	62.5
WP_100001155.1\|189709_191257_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	4.4e-146	51.7
WP_100001157.1\|191240_192149_+	hypothetical protein	A0A1B1P7D7	Bacillus_phage	7.0e-51	39.6
WP_100001159.1\|192185_192536_-	hypothetical protein	NA	NA	NA	NA
WP_100001161.1\|192765_193389_+	hypothetical protein	NA	NA	NA	NA
WP_100001163.1\|193423_194611_+\|terminase	terminase	A0A1B1P7E4	Bacillus_phage	7.7e-82	52.8
WP_100001165.1\|194640_195576_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	1.6e-106	65.0
WP_100001167.1\|195587_195938_+	hypothetical protein	NA	NA	NA	NA
WP_100001704.1\|195943_196336_+	DUF3199 family protein	A0A1B1P7D6	Bacillus_phage	1.9e-13	37.7
WP_100001170.1\|196332_196695_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_100001172.1\|196691_197195_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	8.3e-38	46.9
WP_100001174.1\|197208_197646_+\|portal	phage portal protein	NA	NA	NA	NA
WP_100001176.1\|197642_197834_+	hypothetical protein	NA	NA	NA	NA
WP_100001178.1\|197834_199235_+\|tail	phage tail sheath protein	A0A0A7RTT5	Clostridium_phage	2.9e-80	40.9
WP_019712741.1\|199236_199680_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	5.8e-27	46.5
WP_129192939.1\|200047_200137_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_100001180.1\|200281_200731_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	2.0e-11	38.2
WP_100001182.1\|200946_206253_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	3.1e-42	44.4
WP_069013434.1\|206245_206905_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	4.5e-07	49.1
WP_100001184.1\|206918_207899_+\|portal	phage portal protein	H7BV96	unidentified_phage	7.1e-41	32.0
WP_069013436.1\|207895_208162_+	DUF2577 family protein	NA	NA	NA	NA
WP_069013437.1\|208175_208601_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	1.1e-11	35.2
WP_100001186.1\|208593_209640_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.6e-70	44.6
WP_025284118.1\|209623_210202_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	1.3e-13	33.1
WP_100001188.1\|210198_210471_+	hypothetical protein	NA	NA	NA	NA
WP_025284120.1\|210473_211571_+	hypothetical protein	M4ZRP1	Bacillus_phage	3.1e-13	53.5
WP_069013440.1\|211582_211921_+\|portal	phage portal protein	NA	NA	NA	NA
WP_069013441.1\|211917_212082_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	1.1e-12	58.5
WP_069013442.1\|212177_213080_+\|portal	phage portal protein	NA	NA	NA	NA
WP_025284124.1\|213150_213429_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	1.5e-28	70.7
WP_025284125.1\|213441_213705_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	1.1e-25	69.0
WP_100001190.1\|213760_214732_+	LysM peptidoglycan-binding domain-containing protein	A0A218KC88	Bacillus_phage	9.1e-65	67.4
WP_061862609.1\|215294_215837_+	HNH endonuclease	NA	NA	NA	NA
WP_022552615.1\|215850_216408_+	SMI1/KNR4 family protein	O64022	Bacillus_phage	2.4e-46	53.8
WP_100001192.1\|216502_216781_-	hypothetical protein	NA	NA	NA	NA
WP_100001194.1\|216787_218497_-	ribonuclease YeeF family protein	A0A1P8CWI7	Bacillus_phage	3.4e-67	54.8
WP_021494571.1\|218707_219835_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	7.3e-90	48.3
220802:220821	attR	NA	NA	NA	NA

DBSCAN-SWA_2

724167 : 734058

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408896.1\|724167_725460_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3
WP_007408897.1\|725535_726255_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	5.7e-48	44.7
WP_003155758.1\|726254_726509_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_007408898.1\|726505_727189_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_061046488.1\|727172_729401_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.5e-158	40.5
WP_007609856.1\|729376_730807_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-54	32.7
WP_094031563.1\|730898_731939_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	3.7e-64	41.9
WP_007408902.1\|731935_732523_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-26	38.8
WP_094031564.1\|732519_734058_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.7e-78	50.8

DBSCAN-SWA_3

1294117 : 1326151

Bacillus_phage(32.26%)

terminase,tail,plate,holin,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100001381.1\|1294117_1295254_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	8.3e-94	47.6
WP_003154881.1\|1295243_1295378_+	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_015417280.1\|1295520_1296474_+	LysM peptidoglycan-binding domain-containing protein	A0A218KC88	Bacillus_phage	1.1e-62	69.3
WP_007610770.1\|1296511_1296889_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.5e-15	41.4
WP_047935636.1\|1296998_1297604_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	1.0e-42	48.3
WP_007610775.1\|1297722_1298313_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.0e-39	51.7
WP_003154871.1\|1298461_1298800_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_007407285.1\|1298990_1299170_+	hypothetical protein	NA	NA	NA	NA
WP_100001383.1\|1299159_1299987_+\|portal	phage portal protein	S6BFM4	Thermus_phage	2.2e-19	49.0
WP_014417520.1\|1299886_1300687_+	ATP-binding protein	A6XMI1	Bacillus_virus	3.0e-58	45.3
WP_100001386.1\|1300951_1301293_+\|portal	phage portal protein	NA	NA	NA	NA
WP_100001388.1\|1301282_1301486_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.4e-12	51.5
WP_007407279.1\|1301599_1302112_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	3.8e-22	44.6
WP_100001390.1\|1302224_1303022_+\|terminase	terminase	A0A0S2MVB6	Bacillus_phage	1.6e-59	49.8
WP_032871272.1\|1303018_1304317_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	7.2e-150	59.2
WP_094031916.1\|1304365_1305757_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	3.0e-138	55.8
WP_094031665.1\|1305776_1306622_+\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	9.7e-55	57.6
WP_007407274.1\|1306648_1307584_+\|portal	phage portal protein	A0A1B1P7E3	Bacillus_phage	3.3e-104	62.8
WP_015239680.1\|1307600_1307984_+	DUF3199 family protein	NA	NA	NA	NA
WP_007407272.1\|1307980_1308337_+	DUF3599 family protein	NA	NA	NA	NA
WP_015239681.1\|1308333_1308837_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	2.1e-36	41.1
WP_032871277.1\|1308833_1309280_+	hypothetical protein	NA	NA	NA	NA
WP_007610809.1\|1309276_1309486_+	hypothetical protein	NA	NA	NA	NA
WP_015239683.1\|1309485_1310883_+	phage-like element PBSX protein xkdK	A0A0A7RTT5	Clostridium_phage	9.0e-82	40.4
WP_003154837.1\|1310884_1311328_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_094031666.1\|1311404_1311851_+\|portal	phage portal protein	A0A0K2CNS3	Brevibacillus_phage	1.0e-10	35.8
WP_015239684.1\|1311892_1312045_+	hypothetical protein	NA	NA	NA	NA
WP_094031667.1\|1312032_1317321_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	2.0e-41	46.6
WP_007610816.1\|1317313_1317973_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.8e-08	45.3
WP_100001393.1\|1317986_1318964_+\|portal	phage portal protein	A0A1L6BY20	Clostridium_phage	6.4e-34	30.6
WP_007610818.1\|1318963_1319230_+	DUF2577 family protein	S6C459	Thermus_phage	1.2e-06	38.6
WP_094031917.1\|1319333_1319759_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	2.5e-11	35.9
WP_015239688.1\|1319751_1320798_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.3e-69	44.1
WP_015239689.1\|1320781_1321360_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	3.1e-12	28.9
WP_060674884.1\|1321356_1321629_+	hypothetical protein	NA	NA	NA	NA
WP_052827325.1\|1321631_1323263_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.6e-53	33.5
WP_043021266.1\|1323275_1323647_+	YomQ/XkdW protein, phage-like element PBSX	NA	NA	NA	NA
WP_012117366.1\|1323651_1323849_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	2.5e-14	63.6
WP_015239693.1\|1323905_1324667_+	hypothetical protein	NA	NA	NA	NA
WP_003154815.1\|1324718_1324982_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	8.8e-23	63.1
WP_003154813.1\|1324995_1325259_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-23	65.5
WP_020955695.1\|1325272_1326151_+	LysM peptidoglycan-binding domain-containing protein	Q9ZXD7	Bacillus_phage	1.1e-80	60.2

DBSCAN-SWA_4

1882946 : 1889160

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003154061.1\|1882946_1883339_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	3.8e-30	59.1
WP_007410373.1\|1883298_1885401_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	85.7
WP_012117608.1\|1885418_1886408_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	1.1e-155	83.0
WP_012117609.1\|1886456_1887077_+	hypothetical protein	A0A127AYS1	Bacillus_phage	2.1e-46	47.9
WP_020955856.1\|1887126_1887885_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	4.8e-53	50.4
WP_007410369.1\|1887918_1888143_-	hypothetical protein	NA	NA	NA	NA
WP_015417523.1\|1888191_1889160_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	8.0e-53	40.9

DBSCAN-SWA_5

1969924 : 2130236

Bacillus_phage(44.9%)

tRNA,bacteriocin,head,terminase,protease,integrase,tail,plate,holin,capsid,portal

attL 2124076:2124091|attR 2126048:2126063

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052827494.1\|1969924_1970134_+\|bacteriocin	bacteriocin-like WGxF protein	NA	NA	NA	NA
WP_031379074.1\|1970393_1970705_+	hypothetical protein	NA	NA	NA	NA
WP_094031748.1\|1970997_1972134_-\|holin	choline esterase	NA	NA	NA	NA
WP_094031749.1\|1972378_1973878_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_017417895.1\|1974327_1974639_+	DUF4870 domain-containing protein	A0A2H4J741	uncultured_Caudovirales_phage	4.5e-10	41.7
WP_094031750.1\|1974693_1976091_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	8.9e-29	28.4
WP_094031751.1\|1976093_1976801_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.0e-38	38.0
WP_042635241.1\|1976944_1978216_-	glucuronoxylanase	NA	NA	NA	NA
WP_094031752.1\|1978277_1979816_-	carbohydrate-binding protein	NA	NA	NA	NA
WP_094031753.1\|1980140_1987997_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	6.3e-124	22.5
WP_094031754.1\|1988085_2004174_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.5e-90	27.2
WP_094031755.1\|2004218_2016167_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.2e-115	28.1
WP_017417904.1\|2016186_2017389_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_007410137.1\|2017948_2018734_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_014305098.1\|2018746_2019409_-	CoA transferase subunit B	NA	NA	NA	NA
WP_094031756.1\|2019426_2020128_-	CoA transferase subunit A	NA	NA	NA	NA
WP_017417906.1\|2020152_2021598_-	GntP family permease	NA	NA	NA	NA
WP_094031757.1\|2021902_2023099_-	cytochrome P450	NA	NA	NA	NA
WP_007410132.1\|2023100_2024120_-	biotin synthase BioB	NA	NA	NA	NA
WP_059367361.1\|2024122_2024824_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_094031758.1\|2024820_2025981_-	8-amino-7-oxononanoate synthase	D2TEZ5	Emiliania_huxleyi_virus	5.4e-32	27.4
WP_085342051.1\|2025970_2027317_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	8.6e-13	23.0
WP_094031759.1\|2027316_2028084_-	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_014418060.1\|2028350_2028758_+	GtrA family protein	NA	NA	NA	NA
WP_038463964.1\|2028764_2029658_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	6.8e-83	55.3
WP_016935933.1\|2029732_2030323_+	DedA family protein	NA	NA	NA	NA
WP_038463969.1\|2030378_2031908_-	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA
WP_020955908.1\|2031925_2032705_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_007410122.1\|2032718_2033618_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
WP_007410121.1\|2033633_2033846_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_032865960.1\|2033842_2035192_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_042635251.1\|2035213_2036854_-	AMP-binding protein	Q75ZG1	Hepacivirus	1.4e-46	26.4
WP_007410118.1\|2036898_2038041_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_094031760.1\|2038181_2039720_-	family 10 glycosylhydrolase	NA	NA	NA	NA
WP_007410116.1\|2039841_2040222_-	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_038463981.1\|2040294_2044098_-	non-ribosomal peptide synthase	A0A2K9KZV5	Tupanvirus	1.4e-84	26.7
WP_094031761.1\|2044116_2054892_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.9e-158	25.5
WP_100001466.1\|2054917_2062567_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	3.1e-75	26.2
WP_100001468.1\|2062582_2070280_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.5e-157	26.5
WP_100001471.1\|2070305_2077964_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	7.4e-77	23.4
WP_020955915.1\|2078443_2079919_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_039063411.1\|2079937_2080906_-	aldose 1-epimerase	NA	NA	NA	NA
WP_007407362.1\|2081021_2082410_-	MATE family efflux transporter	NA	NA	NA	NA
WP_053104023.1\|2082638_2083181_+	hypothetical protein	NA	NA	NA	NA
WP_100001473.1\|2083523_2085350_+	hypothetical protein	A0A1P8CWI7	Bacillus_phage	4.2e-103	51.6
WP_053285546.1\|2085364_2085805_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_100001475.1\|2085999_2086680_+	hypothetical protein	NA	NA	NA	NA
WP_100001477.1\|2086786_2087797_-	N-acetylmuramoyl-L-alanine amidase	A0A1J0MS59	Bacillus_phage	1.0e-188	97.6
WP_100001479.1\|2087852_2088116_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	1.5e-25	67.8
WP_046559637.1\|2088130_2088343_-	hypothetical protein	A0A290GDY2	Caldibacillus_phage	1.4e-15	59.4
WP_013353491.1\|2088393_2088582_-	XkdX family protein	Q9ZXD9	Bacillus_phage	5.3e-30	96.8
WP_100001481.1\|2088578_2088941_-	hypothetical protein	Q9ZXE0	Bacillus_phage	2.7e-54	90.0
WP_100001484.1\|2088937_2090215_-\|plate	BppU family phage baseplate upper protein	D6R402	Bacillus_phage	3.8e-143	77.6
WP_100001486.1\|2090227_2092792_-	peptidase G2	D6R401	Bacillus_phage	2.9e-288	57.0
WP_100001488.1\|2092842_2094546_-	alkaline phosphatase	D6R400	Bacillus_phage	2.7e-181	57.2
WP_100001490.1\|2094560_2095400_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	2.5e-95	59.0
WP_100001492.1\|2095393_2099881_-\|tail	phage tail tape measure protein	A0A1Q1PVX7	Staphylococcus_phage	2.7e-63	31.5
WP_049627390.1\|2100086_2100455_-	hypothetical protein	NA	NA	NA	NA
WP_014418477.1\|2100513_2101128_-\|tail	tail protein	A0A2H4J8F3	uncultured_Caudovirales_phage	1.1e-23	33.9
WP_100001494.1\|2101142_2101526_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_100001496.1\|2101522_2101921_-	hypothetical protein	NA	NA	NA	NA
WP_100001498.1\|2101917_2102235_-\|head	phage head closure protein	A0A2H4JCB1	uncultured_Caudovirales_phage	1.4e-11	36.3
WP_100001500.1\|2102224_2102527_-\|head,tail	phage gp6-like head-tail connector protein	A0A0S2GLH6	Bacillus_phage	2.6e-10	40.5
WP_100001503.1\|2102544_2102943_-	collagen-like protein	D6R3Z0	Bacillus_phage	1.4e-11	43.6
WP_088005403.1\|2102970_2104263_-\|capsid	phage major capsid protein	A0A0A7RTL2	Clostridium_phage	9.8e-91	47.6
WP_100001505.1\|2104300_2104927_-\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	1.5e-84	79.1
WP_100001507.1\|2104889_2106170_-\|portal	phage portal protein	D6R3Y6	Bacillus_phage	2.6e-152	63.3
WP_100001509.1\|2106358_2108065_-\|terminase	terminase large subunit	A0A0S2GLF0	Bacillus_phage	1.1e-203	61.8
WP_014418488.1\|2108061_2108577_-\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	9.8e-34	44.6
WP_048367493.1\|2108805_2109171_-	HNH endonuclease	A0A1U7Q1S7	Geobacillus_virus	1.7e-27	51.7
WP_044053307.1\|2109251_2109782_-	hypothetical protein	NA	NA	NA	NA
WP_100001513.1\|2109781_2111116_-	AAA family ATPase	NA	NA	NA	NA
WP_100001516.1\|2111413_2111881_-	hypothetical protein	NA	NA	NA	NA
WP_024085426.1\|2112111_2112654_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	4.7e-63	66.7
WP_024085427.1\|2112650_2113103_-	DUF1492 domain-containing protein	S6AVV9	Thermus_phage	4.4e-38	57.4
WP_024085429.1\|2113422_2114637_-	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_017417492.1\|2114914_2115349_-	hypothetical protein	A0A2H4J8A0	uncultured_Caudovirales_phage	1.2e-48	70.0
WP_017417491.1\|2115456_2115807_+	hypothetical protein	NA	NA	NA	NA
WP_024085433.1\|2115950_2116364_-	hypothetical protein	A0A1P8CWZ8	Bacillus_phage	4.7e-71	94.7
WP_014304486.1\|2116368_2116623_-	hypothetical protein	A0A2H4JA61	uncultured_Caudovirales_phage	8.5e-07	39.8
WP_038458317.1\|2116622_2116835_-	hypothetical protein	A0A0A7AR03	Bacillus_phage	5.4e-15	60.3
WP_024085435.1\|2116831_2117212_-	hypothetical protein	NA	NA	NA	NA
WP_024085436.1\|2117352_2117556_-	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	7.5e-14	55.4
WP_157774447.1\|2117787_2117943_-	BH0509 family protein	NA	NA	NA	NA
WP_024085439.1\|2118050_2118599_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	2.0e-05	36.5
WP_038458325.1\|2118914_2119748_-	ATP-binding protein	Q2I8C8	Bacillus_phage	3.5e-33	34.8
WP_100001518.1\|2119731_2120604_-	replication protein	V9QKF6	Oenococcus_phage	6.3e-49	45.1
WP_024085444.1\|2120590_2120815_-	hypothetical protein	NA	NA	NA	NA
WP_024085445.1\|2120832_2121156_-	DUF771 domain-containing protein	Q9MC19	Lactococcus_phage	6.0e-13	39.8
WP_041482367.1\|2121222_2121426_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014305167.1\|2121591_2121990_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_048367326.1\|2122421_2123522_-	hypothetical protein	NA	NA	NA	NA
WP_024085448.1\|2123764_2124871_+\|integrase	site-specific integrase	Q5YAA6	Bacillus_phage	1.7e-112	58.0
2124076:2124091	attL	NA	NA	NA	NA
WP_094031767.1\|2125144_2125690_-\|integrase	site-specific integrase	A0A0S2GLG4	Bacillus_phage	7.2e-43	49.2
WP_003153848.1\|2126005_2126236_-	excisionase family DNA-binding protein	NA	NA	NA	NA
2126048:2126063	attR	NA	NA	NA	NA
WP_094031768.1\|2126479_2128255_+	gamma-glutamyltransferase	NA	NA	NA	NA
WP_007407356.1\|2128301_2129477_-	MFS transporter	NA	NA	NA	NA
WP_003153841.1\|2129620_2129923_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_062848359.1\|2129969_2130236_-\|tRNA	threonyl-tRNA synthetase	NA	NA	NA	NA

DBSCAN-SWA_6

2226485 : 2239458

Bacillus_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003153663.1\|2226485_2226911_+	SDR family NAD(P)-dependent oxidoreductase	A0A1V0SAI8	Catovirus	2.7e-13	35.6
WP_003153662.1\|2226944_2227121_-	hypothetical protein	O64196	Bacillus_phage	6.5e-22	93.1
WP_012117786.1\|2227483_2227837_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_032869991.1\|2228291_2228528_+	hypothetical protein	NA	NA	NA	NA
WP_015240044.1\|2228653_2229028_+	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	9.0e-29	52.0
WP_094031786.1\|2229261_2229714_-	hypothetical protein	O64117	Bacillus_phage	4.8e-61	77.3
WP_059368422.1\|2230081_2231218_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.0e-163	75.9
WP_032870000.1\|2231207_2231390_+	hypothetical protein	NA	NA	NA	NA
WP_007612065.1\|2232427_2232766_-	hypothetical protein	A0A1P8CWM9	Bacillus_phage	3.8e-26	60.2
WP_094031787.1\|2233524_2234121_-	SMI1/KNR4 family protein	O64025	Bacillus_phage	7.5e-86	82.4
WP_094031788.1\|2234122_2235874_-	hypothetical protein	A0A1P8CWI7	Bacillus_phage	6.6e-231	68.0
WP_076982865.1\|2235910_2236345_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_094031789.1\|2236609_2237575_+	endonuclease	A0A1P8CWK6	Bacillus_phage	5.5e-78	75.0
WP_032866268.1\|2237790_2239458_+	recombinase family protein	O64015	Bacillus_phage	4.9e-276	91.2

DBSCAN-SWA_7

2375248 : 2381501

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007409428.1\|2375248_2375842_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6
WP_100001543.1\|2375831_2376587_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.2e-10	25.7
WP_003153376.1\|2376794_2376884_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_012117889.1\|2376971_2377493_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153373.1\|2377558_2377933_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003153372.1\|2378049_2378514_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_094031815.1\|2378546_2379743_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.6e-116	54.9
WP_007409425.1\|2379757_2380405_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-39	44.3
WP_094031816.1\|2380385_2381501_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-54	36.6

DBSCAN-SWA_8

3723787 : 3773031

Staphylococcus_phage(16.67%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003151043.1\|3723787_3724447_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_020957977.1\|3724552_3724741_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_020957978.1\|3724778_3725198_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015240784.1\|3725583_3726963_+	amino acid permease	NA	NA	NA	NA
WP_039063796.1\|3727027_3727528_-	YwgA family protein	NA	NA	NA	NA
WP_007407654.1\|3727567_3728869_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.0e-23	29.5
WP_003151034.1\|3729029_3729254_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_007407656.1\|3729456_3730230_+	RsfA family transcriptional regulator	NA	NA	NA	NA
WP_079891039.1\|3730529_3730805_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_007407658.1\|3730805_3731360_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_020957981.1\|3731457_3732378_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-36	36.6
WP_025285429.1\|3732374_3733328_+	ABC transporter permease	NA	NA	NA	NA
WP_020957983.1\|3733317_3734154_-	hypothetical protein	NA	NA	NA	NA
WP_020957984.1\|3734144_3734942_-	hypothetical protein	NA	NA	NA	NA
WP_100001632.1\|3734910_3735834_-	hypothetical protein	NA	NA	NA	NA
WP_003151018.1\|3735882_3736062_-	hypothetical protein	NA	NA	NA	NA
WP_007407665.1\|3736213_3737077_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_007407666.1\|3737123_3738023_-	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	2.1e-07	40.2
WP_015240790.1\|3738138_3739116_+	putative sulfate exporter family transporter	NA	NA	NA	NA
WP_003151012.1\|3739153_3740125_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_003151011.1\|3740386_3741151_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_100001634.1\|3741270_3742050_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_021494772.1\|3742066_3743266_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_007407671.1\|3743278_3744460_-	MFS transporter	NA	NA	NA	NA
WP_038464381.1\|3744456_3745875_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_020957990.1\|3745892_3746654_-	dihydroanticapsin 7-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.7e-21	30.5
WP_038464384.1\|3746650_3747361_-	cupin domain-containing protein	NA	NA	NA	NA
WP_015418458.1\|3747350_3747965_-	bacilysin biosynthesis protein BacA	NA	NA	NA	NA
WP_038464387.1\|3748126_3749365_-	MFS transporter	NA	NA	NA	NA
WP_094031371.1\|3749587_3750790_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	3.2e-27	26.1
WP_039063798.1\|3750822_3752241_-	amino acid permease	NA	NA	NA	NA
WP_094031372.1\|3752265_3753948_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_015240796.1\|3754019_3755567_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_007407680.1\|3755775_3757062_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_076424692.1\|3757295_3758231_-	sensor histidine kinase	W8CYF6	Bacillus_phage	3.7e-23	28.9
WP_012118715.1\|3758232_3758931_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.2e-35	35.4
WP_094031373.1\|3759122_3759989_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_025285445.1\|3760009_3760714_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_076424918.1\|3760778_3761705_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-43	45.9
WP_003150986.1\|3762053_3762509_-\|coat	spore coat protein	NA	NA	NA	NA
WP_015418465.1\|3762505_3763354_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.4e-37	37.3
WP_007407684.1\|3763374_3764322_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.9e-69	42.9
WP_012118722.1\|3764324_3765062_-	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	6.5e-47	42.3
WP_094031374.1\|3765089_3766094_-\|coat	spore coat protein	NA	NA	NA	NA
WP_094031375.1\|3766095_3766839_-\|coat	spore coat protein	NA	NA	NA	NA
WP_012118725.1\|3766828_3767950_-\|coat	spore coat protein	NA	NA	NA	NA
WP_032868197.1\|3767949_3768813_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012118727.1\|3768813_3769983_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_094031376.1\|3770005_3771430_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_094031377.1\|3771434_3772205_-	glycosyltransferase family 2 protein	A0A0F7L2F7	uncultured_marine_virus	4.4e-06	26.3
WP_094031378.1\|3772485_3773031_+\|coat	spore coat protein GerQ	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage