CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017310	Xanthomonas campestris pv. campestris str. CN12 chromosome, complete genome	3 crisprs	DinG,DEDDh,csa3,cas3,WYL	3	17	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017310_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017310_1

2358956-2359043

Orphan

Consensus_repeat	Method
GTGTCCCGCGATGGTGGGCGGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017310_1

>merge|NZ_CP017310|1|2358956-2359043|CRISPRCasFinder
GTGTCCCGCGATGGTGGGCGGGCAGGGGCCTTGCAACCAAGTCGCAGATCAGCCGCTCTAAAGGGTGTCCCGCGATGGTGGCCGGGCA

>NZ_CP017310|1|1|2358956-2359043|CRISPRCasFinder
GTGTCCCGCGATGGTGGGCGGGCA	GGGGCCTTGCAACCAAGTCGCAGATCAGCCGCTCTAAAGG
GTGTCCCGCGATGGTGGCCGGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017310.1\|WP_075285692.1\|2357537_2358323_-\|flagellar-basal-body-rod-protein-FlgG	unknown	unknown	gnl\|CDD\|183687
NZ_CP017310.1\|WP_011037112.1\|2359277_2360033_-\|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl\|CDD\|183642
NZ_CP017310.1\|WP_011037109.1\|2354488_2355676_-\|flagellar-assembly-peptidoglycan-hydrolase-FlgJ	unknown	unknown	gnl\|CDD\|237180
NZ_CP017310.1\|WP_075285694.1\|2351397_2352603_-\|flagellar-hook-associated-protein-FlgL	unknown	unknown	gnl\|CDD\|236345
NZ_CP017310.1\|WP_011037104.1\|2347769_2348183_-\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|235560
NZ_CP017310.1\|WP_012438352.1\|2348330_2349659_-\|flagellar-filament-capping-protein-FliD	unknown	unknown	gnl\|CDD\|311255
NZ_CP017310.1\|WP_011037118.1\|2364735_2365380_+\|flagellar-basal-body-P-ring-formation-protein-FlgA	unknown	unknown	gnl\|CDD\|183625
NZ_CP017310.1\|WP_011037113.1\|2360176_2361400_-\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|235557
NZ_CP017310.1\|WP_002813454.1\|2362120_2362528_-\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|183634
NZ_CP017310.1\|WP_011037116.1\|2362531_2362933_-\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|183628
NZ_CP017310.1\|WP_011037120.1\|2365772_2366105_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_014507703.1\|2355677_2356796_-\|flagellar-basal-body-P-ring-protein-FlgI	unknown	unknown	gnl\|CDD\|235399
NZ_CP017310.1\|WP_011037117.1\|2363397_2364342_-\|chemotaxis-protein-CheV	unknown	unknown	gnl\|CDD\|381151
NZ_CP017310.1\|WP_011037111.1\|2356806_2357499_-\|flagellar-basal-body-L-ring-protein-FlgH	unknown	unknown	gnl\|CDD\|234700
NZ_CP017310.1\|WP_011037106.1\|2349879_2351079_-\|flagellin	unknown	unknown	gnl\|CDD\|236344
NZ_CP017310.1\|WP_075285693.1\|2352602_2354477_-\|flagellar-hook-associated-protein-FlgK	unknown	unknown	gnl\|CDD\|183697
NZ_CP017310.1\|WP_011037103.1\|2347467_2347773_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340989
NZ_CP017310.1\|WP_011037121.1\|2366182_2367409_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_CP017310.1\|WP_050911506.1\|2361431_2362097_-\|flagellar-basal-body-rod-modification-protein	unknown	unknown	gnl\|CDD\|183639
NZ_CP017310.1\|WP_011037119.1\|2365446_2365758_+\|flagellar-biosynthesis-anti-sigma-factor-FlgM	unknown	unknown	gnl\|CDD\|274802

Protein	Function_ID	Function_description	E-value
NZ_CP017310.1\|WP_075285692.1\|2357537_2358323_-\|flagellar-basal-body-rod-protein-FlgG	gnl\|CDD\|183687	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional.	2.42352e-154
NZ_CP017310.1\|WP_011037112.1\|2359277_2360033_-\|flagellar-basal-body-rod-protein-FlgF	gnl\|CDD\|183642	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed.	3.04931e-127
NZ_CP017310.1\|WP_011037109.1\|2354488_2355676_-\|flagellar-assembly-peptidoglycan-hydrolase-FlgJ	gnl\|CDD\|237180	PRK12711, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ.	0
NZ_CP017310.1\|WP_075285694.1\|2351397_2352603_-\|flagellar-hook-associated-protein-FlgL	gnl\|CDD\|236345	PRK08870, flgL, flagellar hook-associated protein FlgL; Reviewed.	2.68897e-153
NZ_CP017310.1\|WP_011037104.1\|2347769_2348183_-\|flagellar-export-chaperone-FliS	gnl\|CDD\|235560	PRK05685, fliS, flagellar export chaperone FliS.	1.15393e-45
NZ_CP017310.1\|WP_012438352.1\|2348330_2349659_-\|flagellar-filament-capping-protein-FliD	gnl\|CDD\|311255	pfam07195, FliD_C, Flagellar hook-associated protein 2 C-terminus. The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.	2.60535e-57
NZ_CP017310.1\|WP_011037118.1\|2364735_2365380_+\|flagellar-basal-body-P-ring-formation-protein-FlgA	gnl\|CDD\|183625	PRK12617, flgA, flagellar basal body P-ring formation protein FlgA.	4.43762e-124
NZ_CP017310.1\|WP_011037113.1\|2360176_2361400_-\|flagellar-hook-protein-FlgE	gnl\|CDD\|235557	PRK05682, flgE, flagellar hook protein FlgE; Validated.	1.34821e-159
NZ_CP017310.1\|WP_002813454.1\|2362120_2362528_-\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|183634	PRK12629, flgC, flagellar basal body rod protein FlgC; Provisional.	1.73515e-84
NZ_CP017310.1\|WP_011037116.1\|2362531_2362933_-\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|183628	PRK12620, flgB, flagellar basal body rod protein FlgB; Provisional.	8.52839e-84
NZ_CP017310.1\|WP_014507703.1\|2355677_2356796_-\|flagellar-basal-body-P-ring-protein-FlgI	gnl\|CDD\|235399	PRK05303, flgI, flagellar basal body P-ring protein FlgI.	0
NZ_CP017310.1\|WP_011037117.1\|2363397_2364342_-\|chemotaxis-protein-CheV	gnl\|CDD\|381151	cd19924, REC_CheV-like, phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins. This subfamily includes the REC domains of Bacillus subtilis chemotaxis protein CheV, Myxococcus xanthus gliding motility regulatory protein FrzE, and similar proteins. CheV is a hybrid protein with an N-terminal CheW-like domain and a C-terminal CheY-like REC domain. The CheV pathway is one of three systems employed by B. subtilis for sensory adaptation that contribute to chemotaxis. It is involved in the transmission of sensory signals from chemoreceptors to flagellar motors. Together with CheW, it is involved in the coupling of methyl-accepting chemoreceptors to the central two-component histidine kinase CheA. FrzE is a hybrid sensor histidine kinase/response regulator that is part of the Frz pathway that controls cell reversal frequency to support directional motility during swarming and fruiting body formation. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.15499e-39
NZ_CP017310.1\|WP_011037111.1\|2356806_2357499_-\|flagellar-basal-body-L-ring-protein-FlgH	gnl\|CDD\|234700	PRK00249, flgH, flagellar basal body L-ring protein FlgH.	2.01452e-83
NZ_CP017310.1\|WP_011037106.1\|2349879_2351079_-\|flagellin	gnl\|CDD\|236344	PRK08869, PRK08869, polar flagellin E.	6.92586e-148
NZ_CP017310.1\|WP_075285693.1\|2352602_2354477_-\|flagellar-hook-associated-protein-FlgK	gnl\|CDD\|183697	PRK12714, flgK, flagellar hook-associated protein FlgK; Provisional.	0
NZ_CP017310.1\|WP_011037103.1\|2347467_2347773_-\|hypothetical-protein	gnl\|CDD\|340989	cd17431, MFS_GLUT_Class1, Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00208651
NZ_CP017310.1\|WP_011037121.1\|2366182_2367409_+\|sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.36825e-52
NZ_CP017310.1\|WP_050911506.1\|2361431_2362097_-\|flagellar-basal-body-rod-modification-protein	gnl\|CDD\|183639	PRK12634, flgD, flagellar basal body rod modification protein; Reviewed.	2.90571e-132
NZ_CP017310.1\|WP_011037119.1\|2365446_2365758_+\|flagellar-biosynthesis-anti-sigma-factor-FlgM	gnl\|CDD\|274802	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM. FlgM interacts with and inhibits the alternative sigma factor sigma(28) FliA. The C-terminus of FlgM contains the sigma(28)-binding domain.	1.03432e-14

>NZ_CP017310.1|WP_075285692.1|2357537_2358323_-|flagellar-basal-body-rod-protein-FlgG
MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQTQLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTFQINAQGEVVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAAQAAAQEIGALTLTDFINPSGLQAKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDSMLGYLNNNV
>NZ_CP017310.1|WP_011037111.1|2356806_2357499_-|flagellar-basal-body-L-ring-protein-FlgH
MSRLPSLSSLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSLNLYGDRRARDVGDLLTVNLVENTTASSTANTSISKADTVDMSTPTLLGVPLTVNGIDVLRNSTSGDRSFDGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQVQGIVRAADIAPDNSVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
>NZ_CP017310.1|WP_014507703.1|2355677_2356796_-|flagellar-basal-body-P-ring-protein-FlgI
MNLSSLPHRLLAAAVALCAIAAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTSQAPFTVQSLKNLLGELGVNVPANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANAVSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDGSRVSVNIPSVGRIPNGATVERALPDVFAGSGEITLNLHQNDFTTVSRMVAAIDNSFGAGTARAVDGVTVSVRSPTDPSARIGLLARLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQPGAFSGGRTAVTPQSTITATSEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALKQAGALTAELEVI
>NZ_CP017310.1|WP_011037109.1|2354488_2355676_-|flagellar-assembly-peptidoglycan-hydrolase-FlgJ
MRISASPIDLNPSTKADPAKIDKVSRQLEGQFAQMLVKSMRDASSGDPMFPGENQMFREMYDQQMAKALTDGKGLGLSAMISKQLSGDTGGPALNTSLSTADAAKAYALVAGKRDASLPLPARDGAATSVGASLGAAVGTAAGIGAGGLTGIGMSQVLDLIAGRTGGEAGGDDAAALSWPSANDRWSDVTATDAADANAAVNATAASSAAASLGERTPEGFVAKIWTHAQKAARELGVDPRALVAQAALETGWGRRGIGNGGDSNNLFGIKATGWNGAKVTTGTHEYVNGVKTTETADFRAYGSAEESFADYVRLLKNNSRYQTALQAGTDIKGFARGLQQAGYATDPGYAAKIAAIANGPTIDRAVAAIGNAAADLSNRYASTAEPVGLGTIRR
>NZ_CP017310.1|WP_075285693.1|2352602_2354477_-|flagellar-hook-associated-protein-FlgK
MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKISDVGRVADQLAISRLLDSGGELSRLQQLSSLSNRVDSLYSNTATNVAGLWSNFFDSASALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSGLTSSVDEVNRLTQQIAKINGTIGNSIDNASADLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTAAKLTTVADPYQPTKLQVAMQTQGQNVSLSPSSLGGQIGGLLEFRSNVLEPTQAELGRLAVGMASSFNTAHSQGMDLYGALGGNFFNIGSPTTAANPKNTGSAALTASFSNLGAVDGQNVTLSFDAGSWKATRTDTGSTVPLTGTGTAADPLVVNGVSMVVGGTPANGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATIANLGTGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGTGPFAYTPGQTISANGWSFALDGAPKAGDTFGVGPMGAGSSDNGNAKLLAKVEDAKALNGGTVTLNGALSGLTTSVGSAARAANYAADAQEVINDQAQASRDSISGVNLDEEAADMLKLQQAYQAAAQMISTADTIFQAILGAVR
>NZ_CP017310.1|WP_075285694.1|2351397_2352603_-|flagellar-hook-associated-protein-FlgL
MTNRISTSMMYSQSVSAMTAKQSRLNQLEAQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQENALAQAGDKMARVTELAVQSNNSSLSPDDRKAIASELTALRDSMVSLANSTDGTGRYLFAGTSDGNAPFIKGNGNVLYNGDQTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGSVDSHANATNTGTGLLLDFSRDASSGSWNGGSYSVQFTAADTYEVRDSTNALVSTGTYKDGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDMVAALNSDTQTPTQKAAMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIGQYELERASLQAAQTIFQQMQSSSLFNLIR
>NZ_CP017310.1|WP_011037106.1|2349879_2351079_-|flagellin
MAQVINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDVASRNANDGISLAQTAEGAMVEIGNNLQRIRELSVQSANATNSATDREALNSEVKQLTSEIDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKANFAASVSGAGVTGAATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKKVASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQTASAASGSTASTLSSLDISTFSGAQKALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ
>NZ_CP017310.1|WP_012438352.1|2348330_2349659_-|flagellar-filament-capping-protein-FliD
MASVISTSSSGLDIPTVVSTLVSRQKDPEQARINKAGTAATTQLSAISQIKSSMTTLKSALDKVVSSADTNAYKASVPTDAGFTATTTSSAAPGNYSVEVVSLASAQKLASGAFTADATVGSGTLTIGYGDKSITVDISGTDKLTDIAAAINKAAGGKGVTASVVTANDGQHLVFNAVDTGTKGALTVSASDPSLSALTFGAGVTGGLTQQVAAADALVRVDGFERTSSSNTVTDIVPGVVLNLTKAAEGTKVTLGVTADTSGLKGNLTAFAAAYNTANTLLKNSSSYNAETRTASALTGDSLVRGLQQQLRGQVSGSISELKALGLTIDKDGVMSFDGGKFDTAIAADGGAAAEALGKDSKFGSGLTKLLDANVNVNNGTLTLRSDSLNKQIKGFEADLDNLDARMEKLTDRYTAQFTAMETMISKMQGATGSLSSLLAIK
>NZ_CP017310.1|WP_011037104.1|2347769_2348183_-|flagellar-export-chaperone-FliS
MYGSNRQYAEQYRKVGVSTSVTEADPHKLVSLLFAGACQRIRLAQACLAQGDQARKGKAIGEACAIVGHLNGSLDHEAGGEIAGNLSALYDYVIQRLTAANLHNDETALTEALDLLSEIDSAWNSIPLDQRGIAAAS
>NZ_CP017310.1|WP_011037103.1|2347467_2347773_-|hypothetical-protein
MSPPMHSVQSLQDEVSEIRIAMSREEFEVMPHMLDVHDLHVQEYCKHADVAQDRDAVQALQAMQQELVRMMRERQRKLLELIRAQRTSATASRAYARVGRI
>NZ_CP017310.1|WP_011037112.1|2359277_2360033_-|flagellar-basal-body-rod-protein-FlgF
MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAFQIRGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLMRRPDGLMRNTSTDPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLRVSG
>NZ_CP017310.1|WP_011037113.1|2360176_2361400_-|flagellar-hook-protein-FlgE
MAFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRVSNVAQQFSQGNIDPTGRSLDLAISGEGFFAVSSNGAKMYTRAGNFQTDANGYVINPQGARLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLAFTLPGNASAPTVTPFNPADDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGSAVGAPTTLQFSDTGSLTTPANGIVAMDPFTPSTGAGVLSMQLNVSGSTQYGEAFALRDTRQDGYASGKLNEISIDTSGVVFARYSNGADKALGQVALNSFVNPQGLQSQGNNMWAESYTSGAARVGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR
>NZ_CP017310.1|WP_050911506.1|2361431_2362097_-|flagellar-basal-body-rod-modification-protein
MSTIGSDLYNSLGLTTSSKVAKKEDALGQADFLKLMTEQLQHQDPLKPMENSAFLGQLAQFSTVQGIGDLNTKVGNFSDSMNSDQVLKGAALVGHNVLVPSAQVTIDATGSAKGVVAATSAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQTDTAGAKSKLATYVDAPVDSVTIGSDGLYLNLTGLGTSPLANVLRVS
>NZ_CP017310.1|WP_002813454.1|2362120_2362528_-|flagellar-basal-body-rod-protein-FlgC
MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQNRQDPSLTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTMGR
>NZ_CP017310.1|WP_011037116.1|2362531_2362933_-|flagellar-basal-body-rod-protein-FlgB
MSSPFTSFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQATDAKHYEIGSTAGLNPFQITREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAITGQ
>NZ_CP017310.1|WP_011037117.1|2363397_2364342_-|chemotaxis-protein-CheV
MTHDLLNRIDQRTRLAGHNRLALLLFRLGGRQLFGVNVFKVQEVLRRPELFQVPGLPTEFAGVADVRGRSVPVLDLGLAIGHPERDPHGDNGPGYLVVAEFNRSVQGFLVSGVERIVNIAVEDIHPPPELGAEATYLTAVTRFQGELIQVIDVESVLADIAKVSKDVQLDPGLQLVTSDRQFQVLVVDDSRVARQQIRSVLDQLGVAATLLSDGRQALDHLLQVAASGENPAERYAMVISDIEMPAMDGYTLTTEIRRTPGLQGLYVLLHTSLSGVFNNAMVEQVGANAFVAKYSAHELADYVLARLRVVAEAA
>NZ_CP017310.1|WP_011037118.1|2364735_2365380_+|flagellar-basal-body-P-ring-formation-protein-FlgA
MRLLLLVILLVSAPAWADGYQSVDSIRAAALATVGPDAEAEATLDPGLRMPACPIALQAQPTGTNTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVLADPATAVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRVVQGIVEASGTVVVSR
>NZ_CP017310.1|WP_011037119.1|2365446_2365758_+|flagellar-biosynthesis-anti-sigma-factor-FlgM
MSQKIEGNLPTAATLRTATVGSKIASAGEDRASPVAATPPTDSVKLTGEATNLQALQRELSQSSAIDTGRVQAVKEALQNGSYSINPDAIASRMMDLNQQLAG
>NZ_CP017310.1|WP_011037120.1|2365772_2366105_+|hypothetical-protein
MNVNDSLQRLSDALAGERQALIEHDIESLMRHTQDKLAALRALEVQMPEGQEERLRELAEANRANGALLARRRREVNWALRHLGRTESAPSYDANGQSSVLRAGRSLAVA
>NZ_CP017310.1|WP_011037121.1|2366182_2367409_+|sensor-histidine-kinase
MTAKFFLNQTLLPSSAMLRAFGDQMLEGVLLFRADGQLIMANAIARQSLCKEDPTDDRNLGERISQVLPADALNQARSKGTWTGSLPVSDRVVIAHLYYNEEQGVGHFLALFHNIEGQQDYERELQQRHAELRQAYLRLNGAQDKLLQSEKMASIGQLAAGVAHEINNPIGYVHSNLGSLQEYLRSLFTLIEAYERALQAPDPKALIPEIDEIRNRADIDFISRDLPQLMAESREGIERVTRIVRDLKDFSYSDRSESWKMVDLHAGLESTINIIWNELKYKVTLERNYAELPLVECLPSELNQVYMNLLLNAGQAIVERGTITVTTGRDEAENVWIQFQDSGAGIAPDLLQRIFDPFFTTKPVGSGTGLGLSISYGIINKHHGRIDVESVPGQGASFRIVLPVRQPR

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Crispr_ID: NZ_CP017310_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017310_2

4495118-4495331

Orphan

Consensus_repeat	Method
TCAACTTGCTGCGGTCGCCNGC	CRT

4 spacers

The CRISPR arrays of NZ_CP017310_2

>merge|NZ_CP017310|2|4495118-4495331|CRT
TCAACCGGCTGTTGGCGCCCGCGGTCAGGATGCTGTTCTTTCCGGCGGTCAACTTGCTGCGGTCGCCTGCCATCAGCGTGCAATCGTCACCTGCGGTGAGTTTGCTGCGGTCCCCTGCGGTGAGGAAGCTGTTACTGCCGGCCAACAACTTGCTGCGATCGCCGGCGATCTGGGTGCTGTCGGCGCCGGCGATCAACTTGCTGCGGTCGCCTGC

>NZ_CP017310|2|1|4495118-4495331|CRT
TCAACCGGCTGTTGGCGCCCGC	GGTCAGGATGCTGTTCTTTCCGGCGG
TCAACTTGCTGCGGTCGCCTGC	CATCAGCGTGCAATCGTCACCTGCGG
TGAGTTTGCTGCGGTCCCCTGC	GGTGAGGAAGCTGTTACTGCCGGCCA
ACAACTTGCTGCGATCGCCGGC	GATCTGGGTGCTGTCGGCGCCGGCGA
TCAACTTGCTGCGGTCGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017310.1\|WP_040940515.1\|4486875_4488243_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP017310.1\|WP_011035747.1\|4507187_4508771_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP017310.1\|WP_011035762.1\|4489141_4490062_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035766.1\|4485947_4486430_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP017310.1\|WP_011269479.1\|4506497_4507112_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP017310.1\|WP_042597267.1\|4500136_4500769_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP017310.1\|WP_012437212.1\|4503345_4504683_-\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350376
NZ_CP017310.1\|WP_012437210.1\|4508794_4509640_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035755.1\|4499165_4500098_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|226955
NZ_CP017310.1\|WP_100101125.1\|4492749_4494057_+\|DUF3426-domain-containing-protein	unknown	unknown	gnl\|CDD\|378759
NZ_CP017310.1\|WP_011035763.1\|4488779_4489145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_014509172.1\|4486521_4486833_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP017310.1\|WP_012437213.1\|4502905_4503349_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011269480.1\|4500765_4501434_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP017310.1\|WP_011035759.1\|4492085_4492463_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP017310.1\|WP_075285252.1\|4504679_4506443_-\|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|371922
NZ_CP017310.1\|WP_011035761.1\|4490520_4491441_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP017310.1\|WP_075272095.1\|4501412_4503005_-\|TIGR04222-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|275063
NZ_CP017310.1\|WP_011035760.1\|4491442_4491976_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035757.1\|4494172_4494445_+\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020

Protein	Function_ID	Function_description	E-value
NZ_CP017310.1\|WP_011035747.1\|4507187_4508771_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP017310.1\|WP_011035757.1\|4494172_4494445_+\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	3.72538e-51
NZ_CP017310.1\|WP_011035766.1\|4485947_4486430_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	7.59427e-76
NZ_CP017310.1\|WP_011269479.1\|4506497_4507112_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	3.78122e-19
NZ_CP017310.1\|WP_042597267.1\|4500136_4500769_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.78924e-34
NZ_CP017310.1\|WP_012437212.1\|4503345_4504683_-\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	gnl\|CDD\|350376	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases. This subfamily is composed of uncharacterized bacterial and plant dual-specificity protein phosphatases. DUSPs function as a protein-serine/threonine phosphatases (EC 3.1.3.16) and a protein-tyrosine-phosphatases (EC 3.1.3.48).	2.8015e-43
NZ_CP017310.1\|WP_011035755.1\|4499165_4500098_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|226955	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only].	5.97933e-126
NZ_CP017310.1\|WP_100101125.1\|4492749_4494057_+\|DUF3426-domain-containing-protein	gnl\|CDD\|378759	pfam11906, DUF3426, Protein of unknown function (DUF3426). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.	8.45643e-35
NZ_CP017310.1\|WP_040940515.1\|4486875_4488243_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP017310.1\|WP_014509172.1\|4486521_4486833_+\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	4.62397e-43
NZ_CP017310.1\|WP_011269480.1\|4500765_4501434_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	1.63115e-10
NZ_CP017310.1\|WP_011035759.1\|4492085_4492463_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.88605e-09
NZ_CP017310.1\|WP_075285252.1\|4504679_4506443_-\|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase	gnl\|CDD\|371922	pfam12147, Methyltransf_20, Putative methyltransferase. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The family shows homology to methyltransferases.	0
NZ_CP017310.1\|WP_011035761.1\|4490520_4491441_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	5.9931e-137
NZ_CP017310.1\|WP_075272095.1\|4501412_4503005_-\|TIGR04222-domain-containing-membrane-protein	gnl\|CDD\|275063	TIGR04222, integral_membrane_protein, TIGR04222 domain. The majority of the proteins with a domain as described by this model have an extreme C-terminal sequence that is consists of extremely low-complexity sequence, rich in Ser or in Gly interspersed with Cys. That C-terminal region resembles ribosomal natural product precursors, although there is no evidence that C-terminal regions of these proteins undergo any modification or have any such function.	2.14795e-39

>NZ_CP017310.1|WP_011035757.1|4494172_4494445_+|DNA-binding-transcriptional-regulator-Fis
MNAAPSRPDSSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGLT
>NZ_CP017310.1|WP_100101125.1|4492749_4494057_+|DUF3426-domain-containing-protein
MSETPPPRRPLATFLRAAPAAPPLVPTPPAPSTEPADTAVPAPESAPVAAPLAAPVPAPVRPLPAPPRSPEAAPPDAAARAPDTLIAPTRRDAPLSASPLPLPATPPAPVPVPVPVHSSAQTADPAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNAPDQPAIAAQSAASAPGATVTQTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTSTSASASASASTSTSTSTSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADRARLAGDARWRPLVSAACAVARCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQDTLAPGQAVQVAFRVREPAASTAAFSFDFR
>NZ_CP017310.1|WP_011035759.1|4492085_4492463_+|helix-turn-helix-transcriptional-regulator
MSKLYERVREARSLTKLTQEALAGELGVTRSAVAQWEMAEGTAPSVDNLIGLAKRSGMTFEYLATGRGERVFGPPVSSIAEEPAQYRHLDEQQRVLLSRFDALAPRQRTGLLDLLLAEGKPRRRR
>NZ_CP017310.1|WP_011035760.1|4491442_4491976_-|hypothetical-protein
MITTSQRTQGGAVMCKRLWGWRAAPRPKPVPPTPWPAYSPLDPAVARFAGAARYLVWRRDQDWTAVIDGLHWGPALAPRWWAWRHRHWRLLAAGMGVLGSAGGLWLASASAGGWLLAWAALGLVELGMRASAVRQASRWRCAALQRAGWQPVTQLRAISVEDAVTTARIRSGELRPE
>NZ_CP017310.1|WP_011035761.1|4490520_4491441_+|50S-ribosomal-protein-L11-methyltransferase
MPFLELTLPCTRATQPRFENALEDVGALAVTMLDAHAGTINERAILEPGVGEVRLWEETELTALFDGDSDPLMLLAALEAFDPSLDTRHATFRSVEDSAWERAWIDQFKPMRFGARTFIVPWNQDLPEEANTPDAAVVRLDPGLAFGSGTHQTTALCLRWLDALAGEGQLQGCSVLDFGCGSGILALAALKLGAANAVGVDYDPQALLATAENAERNAMEAQMQVYLPQDEPVQTYPVVLANILATALDALAETLAARVAPGGRIALSGIMQGQEQDLVQRYTPWFEHLHCEYDAEWVRIDGVRRH
>NZ_CP017310.1|WP_011035762.1|4489141_4490062_-|hypothetical-protein
MPLVRARHLWLLLAPAALAAAWWQARPQTAGVAPAAVVETAAAHVAPTAGQPHAVPERSAALQLARGTAGEPPQDLYRYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAVSPAGYAADSAWIASQPAPGVAAMHAARERVAQRCAGFAPSDGLSPRVVAQQRQAAARAGSLAAEAAMLALGEPLQTTPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLDGYVAGDQFAELAWQVAACRLGLDCSAQSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADKVDEMVDTLVTRSETQS
>NZ_CP017310.1|WP_011035763.1|4488779_4489145_-|hypothetical-protein
MNYRRLAHGAKFWFWVALFVAYSAAAVGIVMIDTADHRYQPLSVKRITVGADAQLRQHGASQVAAVYRASSGMPFASLPAGATFQVVWPDGSTETMTVVDPSSPSGAVPVPGSQQPAAKRR
>NZ_CP017310.1|WP_040940515.1|4486875_4488243_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MLDKVVIANRGEIALRILRACHTLGIRTVAVHSTVDRNLKHVAMADESVCIGPAASSDSYLNIPALIAAAEVTDAQAIHPGYGFLSENADFAERVEESGFIFIGPKADTIRLMGDKVEAIRAMKAAGVPCVPGSGGPLGDEIVANTKIAREIGYPVIIKAAGGGGGRGMRVVHSEAALKAAIETTKSEAKAAFSNDQVYMEKFLENPRHVEIQVLADGQGNAIHLGERDCSMQRRHQKVVEEAPAPGISEELRAEIGKVCVDACIRIGYRGAGTFEFLFEGGRFYFIEMNTRIQVEHPVTERITGIDLVCEQLRIAAGHKLSIKQSDIVLRGHAIECRINAEDPETFMPNPGLITAFHPPGGPGVRVDTHIYAGYKVPPNYDSMIGKLIVHGPDRETAIARMRVALSEMVVDGIKTNIPLQQRIMRDKGFQAGGQNIHYLEKRLAERKNKSIALV
>NZ_CP017310.1|WP_014509172.1|4486521_4486833_+|four-helix-bundle-protein
MIYRLTEVFPDQERYGLTAQLRRAAVSIPSNIAEGAARRSTPDYSRFLSIARGSLSELDTQVQIAARLGYSRSEDDQSVRRQVDLVFAKLTALMNALRRRGAA
>NZ_CP017310.1|WP_011035766.1|4485947_4486430_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDLRKIKKLIDLLEESNLAEIEIKEGEESVRLARVPKGTQVMSAPMQQYAPAPAAPAPAATMPMQSPTEASTGGAKQGAALPEGHVLRAPMVGTFYTSPSPDKPAFVTVGQQVKAGETLAIIEAMKMFNPIEADISGTIVAVLSDTGQPVEFDQPLFVIG
>NZ_CP017310.1|WP_011035755.1|4499165_4500098_-|phosphatidate-cytidylyltransferase
MHQQTLWLFSGIALVLVVATLISETLRWRARAQPSAVLDNLVARIRAWWVMAGVVGIAFVFGRAGVIGLFALVSLFALREFITLTPTRRGDYYALLAAFYIVLPWQYGLVWTGWYGMYTLLIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFCISHVPALLNLEIPGYAGRNLLLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVLSASLLGMALWWITPFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPVFFHLIRYGWA
>NZ_CP017310.1|WP_042597267.1|4500136_4500769_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIARLIARACSGAIRTLTGARALWRGCAPSNERRVYYGNHASHGDFVLIWSSLPASLRHEVRPVAAADYWQRTALRRYLIHAVFNGVLIERDAARRTRDPIECLCDAVDAGDSLILFPEGTRNPDEGVLPFKSGLYHLARQRPELEFVPVWIDNLKRVMPKGKWLPLPLLCTTTFGAPLRLEADEDKQAFLARAREALLALSPDQLEARA
>NZ_CP017310.1|WP_011269480.1|4500765_4501434_-|CDP-alcohol-phosphatidyltransferase-family-protein
MWRGRRLMAHETTGLRARQRQLARALRGRGATPNGVSWVGIAFAALAGLMFYIALSAPAREGAAPLLLALLGLQGRLWCNRLDGVLARQARLVSRAGEVYNDAPDRLSDVLVCIGLGYGLQASVPWAAQLGWAAALCCVATAYVRMLGLACGTAEPRQGPMSRVQRMHWLSLMTVLALPLQWMGQPRAAAWVLIGALAVLIAGAVLTVVLRLRMIVRALEWT
>NZ_CP017310.1|WP_075272095.1|4501412_4503005_-|TIGR04222-domain-containing-membrane-protein
MARHARPAAHAAAVRSLAGTGVGDRPAGQGDAVTAAPTVPLQATPEQHALWLRLQAYAFGPDADALPAFERRVAQQAHCSVAVAQQLVEEYRRFCFLACTSTAQATPSPLVDQVWHTHLTDTREYWDSFCPQVLQTTLHHQPGRGSAAEDARFQQQYRATLERYELQFGAPPALLWPAPRPAPTAVPAAHDDASAAALRALRGEPAPPSVRRLPRAVIGWAFAAAVAAWLAYSANGGVPQPLQWRGVHFLPFFITLIGLGWSTSAWLRRALRGGRARVVDAVDASEFAYLSGGADRVADLLFTELLVRNAVYLDRDEDAQARRWVRWQPRIAVPPALEPALQALRSAEDPTVAWQALRGLAGPVRQQLIDKGLWLAPGAARWVRAVSTVPVAVVWVLGACKLVIGVQGGSPVGYLLGCMVLTSVLVLGFLLVPVRRTLSGDARLQARRQAVRRDAARTGADPGEAVALYGTVALVGTPWASYHEIRAPNTHHHDSTGSSCGGGGDGGDGGGGDSGGDGGGGCGGCGGGGD
>NZ_CP017310.1|WP_012437213.1|4502905_4503349_-|hypothetical-protein
MTAVVTLASMRALLRQGAAVDRCAVLLLAAAVLLLGITDAPTVVQVAYALSALAGLAQRYWAFRVGLDADLLDAVLGQLERGHTDDAQAAQQLDQALQDIGLLRHAPPVRDWAARWRGMRGLLRTQLLCAALQVLALAIGLLAKGML
>NZ_CP017310.1|WP_012437212.1|4503345_4504683_-|phosphatase-PAP2/dual-specificity-phosphatase-family-protein
MSAGARPFARAALWLAVLGLFFFLSYGLANTLAGRAASVPSVVFGWEHGMPFWPWTIVPYWSIDVFYAVSFFTCRTRRQLDTHALRLFTAQLLCVSCFLLWPLRYSFVRPDTEGVFGWLFAVLLGFDKPYNQAPSLHIVLLVVLWVRYGAQLQGVWRWLLHGWFALIGISVLTTYQHHFIDVPTGLAAGWLCVWLWPERIAAPWTDARLARDPRRWRLAALYLAGAGVTAGMALWLGGAALWLLWMSGALLLVALNYALLGPGGFQKRSDGQLSLAARWLYAPYLLAAWCNSRLWTRRAPLPRAVCDDVWLGRIPLPAQRAAFAVVVDVSAELSLRHAHANDRIIPMLDLVAPAPASLRAAAQAIEAARAHGSVLVCCALGYSRSAASVVTWLVLSQRAASVSEAMAWVRAARPSIVLGPHHQAAIAAACAGDAAADAPIAQVPA
>NZ_CP017310.1|WP_075285252.1|4504679_4506443_-|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase
MRTVVEREFASFDGAPLFYRHWPVQAAADAATPPKAVVLLHRGHEHSGRVMHLAEELQLPDAQFFAWDARGNGRSPGARGDAPGFDALVRDLDSFIAHIGATHGIAVQDIVVIAQSVGAVVASTWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALMQALRGNFFVNSYVKPQWLTHDPARVDSYRTDPLITRPISVRVLLGLYAAGDRVVADAQAITVPTQLLVSGADFVVHRGPQDRFYENLRSPIKQRHFLPGFFHDTLGERDRAVAITQIRQFVSERFAQPPVRADLRDAHRAGPSFEEAERLAWPSQRNSLQDLRWRGVRAGLRLGGTLSEGIALGLQTGFDSGSTLDYIYRNQARGRGPLGRMIDRNYLNAIGWRGIRIRGAHLGELLRATATRLRQAGQPVRVLDIAAGHGRYVLEALGSGAQRADAIVLRDFSPLNVTQGAALIQALGAGDIARFEQGDAFDPVSVGAVDPAPTLAVVSGLYELFADNDQVARSLAGVAAAVPPGGYLLYTGQPWHPQLEFIARALTSHRDGVAWVMRRRSQQEMDGLVEAAGFRKVDQRIDAFGIFTVSLAQRINA
>NZ_CP017310.1|WP_011269479.1|4506497_4507112_-|CDP-alcohol-phosphatidyltransferase-family-protein
MASIYALKGRFQDLLRPMVGALYRGGITANQVTLIAAAISVLVAAVVYRAGTSWPLLYLLLPVWMLLRMALNAIDGMLAREFGQQSRLGAYLNELCDVVADATLYLSLLGVPGVNASALWSFALLAALTEYAGVLGLMVGAGRRYDGPMGKSDRAFVIGALGLALAFGLLGGHGVTGVALLLCLACAATVWRRVRAGLADAAAR
>NZ_CP017310.1|WP_011035747.1|4507187_4508771_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MASDFLPVRRALLSVSDKTGLIDLARALVARNVELLSTGGTAKAIRDAGLPVKDVAELTGFPEMMDGRVKTLHPLVHGGLLGRAGVDEAVMAEHGIAPIDLLVLNLYPFESVTAKADCTLADAVENIDIGGPAMLRSAAKNFARVAVATDPAQYADLLAELEANNGQLSAAQRFALSVAAFNRVAQYDAAISNYLSAVADSAESVPTRSPFPAQINSNFIKVMDLRYGENPHQSGAFYRDLYPVPGTLATFQQLQGKELSYNNLADADAAWECVRQFDAPACVIVKHANPCGVAVGVACGDAYELAYATDPTSAFGGILAFNRTLDAATAKAILDRQFVEVLIAPDYEPGALDYATKKANVRVLKIPHGAGLNNYDTKRIGSGLLMQSADNRGMSLGELSVVTKRAPSDAELADLLFAWRVAKYVKSNAIVYAKDSRTIGVGAGQMSRVVSAKIAALKAEEAKLTVAGSVMASDAFFPFRDGIDAAAAAGIQAVIQPGGSMRDGEVIAAADEHGLAMVFTGVRHFRH
>NZ_CP017310.1|WP_012437210.1|4508794_4509640_+|hypothetical-protein
MHRSHALAALLAAAALLGGCKQAPAPTAAPATKAPATPAATPHLSRTARLEAFVRTRYGDKASLSADWAGEADGFKANSQVCAEQPAVVGEQVQQLLAVCHSLSDGGHGNPGLVDFFVLRGEGDGFKVVAEKLSDTFGSDGQPGSVDILHLGSDFYGFIVHSFWMGQGLLLESQDLVVPGPKGLANAGSLRAHIDNSGSISCEDDAREPDQTEAQCRAEAFNVDFTLDVDSSNIQARTWPLQIHEHGTDCGVALDTTHTFALDTKTWTYPFPNALQREDCR

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Crispr_ID: NZ_CP017310_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017310_3

4496587-4497617

Orphan

Consensus_repeat	Method
GTGCTGCCATAGCCGGCGGTGAG	CRISPRCasFinder

21 spacers

The CRISPR arrays of NZ_CP017310_3

>merge|NZ_CP017310|3|4496587-4497617|CRISPRCasFinder
GTGCTGCCGTAGCCGGCGATCAAGGTGCTGTCCGCACCGGCGGTCGAGGTGCTGCCGTAGCCGGCGGTGAGGTCACTGCCCTTGCGTGCGGTCTGCGTACTGCCATAGCCAGCCGTGAGCGAACTCTCGCTACCCGAGGTCTGCGTGCTGCCGTAGCCGGCGATCAAGGTGCTGTCCGCGCCGGCGGTCGAGGTGCTGCCGTACCCCGTCGTGAGGTCGCTACCCTTGCGCGCGGTTTGGGTGCTGCCGTAGCCGGCGGTGAGCGAACTGTCCCCGCCGGAAGTCTGGGTGCTGCCATAACCGGCGATCAGCGTGCTGTCCGCACCAGCGGTGGATGTGCTGCCGTAACCCGCAGTGAGGTCGCTGCCGGTACGGGCGGTTTGGGTGCTGCCGTAGCCCGCCGTCAGCGAGCTGTCGTTGCCGGATGTCTGCGTACTGCCATAACCAGCAATCAGGGAGCTATCTGCACCTGCGGTGCCTGTGCTGCCATAGCCGGCGGTGAGGTCGCTGCCGTCCTGCGCCGTCTGCGTGCTGCCATAGCCGGCAGTGAGCGAGCTCTCTCCGCCCGAGGTCTGGGTGCTGCCGTAGCCGGCGATCAGCGAGCTATCGGTGCCCGCCGTGCTGGTGCTGCCGTAGCCGGCGGTGAGGTCGCTGCCGTTCTGCGCGGTTTGGGTACTGCCATAGCCGGCAGTCAACGAGCTGTCGCCGCCGGAGGTTTGCGTGCTGCCGTAGCCTGCGATCAGCGAGCTGTCTGCACCGGCGGTTTCCGTACTGCCGTAACCGGCCGTCAGCTCGCTGCCATTGCGGGCGGTCTGTGTGCTGCCATACCCGGCAGTCAGCGTGCTTCCGCCTCCGGCCGTTTGAGAGCTGCCATAGCCGGCAACGATGGTGCTGTCGGATCCGGCCACGCCGGTGCTGCCGTAGCCGGCGATCAACTCGCTGCCGTTCCCCGCGGTCTCGGTACTTCCATAGCCTGCGATCAGCTGACTCTGATCGGCGCCAGTGAGCGTGCTGCCATAGGTGGCGATTTC

>NZ_CP017310|3|2|4496587-4497617|CRISPRCasFinder
GTGCTGCCGTAGCCGGCGATCAA	GGTGCTGTCCGCACCGGCGGTCGAG
GTGCTGCCGTAGCCGGCGGTGAG	GTCACTGCCCTTGCGTGCGGTCTGC
GTACTGCCATAGCCAGCCGTGAG	CGAACTCTCGCTACCCGAGGTCTGC
GTGCTGCCGTAGCCGGCGATCAA	GGTGCTGTCCGCGCCGGCGGTCGAG
GTGCTGCCGTACCCCGTCGTGAG	GTCGCTACCCTTGCGCGCGGTTTGG
GTGCTGCCGTAGCCGGCGGTGAG	CGAACTGTCCCCGCCGGAAGTCTGG
GTGCTGCCATAACCGGCGATCAG	CGTGCTGTCCGCACCAGCGGTGGAT
GTGCTGCCGTAACCCGCAGTGAG	GTCGCTGCCGGTACGGGCGGTTTGG
GTGCTGCCGTAGCCCGCCGTCAG	CGAGCTGTCGTTGCCGGATGTCTGC
GTACTGCCATAACCAGCAATCAG	GGAGCTATCTGCACCTGCGGTGCCT
GTGCTGCCATAGCCGGCGGTGAG	GTCGCTGCCGTCCTGCGCCGTCTGC
GTGCTGCCATAGCCGGCAGTGAG	CGAGCTCTCTCCGCCCGAGGTCTGG
GTGCTGCCGTAGCCGGCGATCAG	CGAGCTATCGGTGCCCGCCGTGCTG
GTGCTGCCGTAGCCGGCGGTGAG	GTCGCTGCCGTTCTGCGCGGTTTGG
GTACTGCCATAGCCGGCAGTCAA	CGAGCTGTCGCCGCCGGAGGTTTGC
GTGCTGCCGTAGCCTGCGATCAG	CGAGCTGTCTGCACCGGCGGTTTCC
GTACTGCCGTAACCGGCCGTCAG	CTCGCTGCCATTGCGGGCGGTCTGT
GTGCTGCCATACCCGGCAGTCAG	CGTGCTTCCGCCTCCGGCCGTTTGA
GAGCTGCCATAGCCGGCAACGAT	GGTGCTGTCGGATCCGGCCACGCCG
GTGCTGCCGTAGCCGGCGATCAA	CTCGCTGCCGTTCCCCGCGGTCTCG
GTACTTCCATAGCCTGCGATCAG	CTGACTCTGATCGGCGCCAGTGAGC
GTGCTGCCATAGGTGGCGATTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017310.1\|WP_040940515.1\|4486875_4488243_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP017310.1\|WP_011035747.1\|4507187_4508771_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP017310.1\|WP_011035762.1\|4489141_4490062_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035766.1\|4485947_4486430_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP017310.1\|WP_011269479.1\|4506497_4507112_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP017310.1\|WP_042597267.1\|4500136_4500769_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP017310.1\|WP_012437212.1\|4503345_4504683_-\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350376
NZ_CP017310.1\|WP_012437210.1\|4508794_4509640_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035755.1\|4499165_4500098_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|226955
NZ_CP017310.1\|WP_100101125.1\|4492749_4494057_+\|DUF3426-domain-containing-protein	unknown	unknown	gnl\|CDD\|378759
NZ_CP017310.1\|WP_011035763.1\|4488779_4489145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_014509172.1\|4486521_4486833_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP017310.1\|WP_012437213.1\|4502905_4503349_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011269480.1\|4500765_4501434_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP017310.1\|WP_011035759.1\|4492085_4492463_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP017310.1\|WP_075285252.1\|4504679_4506443_-\|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|371922
NZ_CP017310.1\|WP_011035761.1\|4490520_4491441_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP017310.1\|WP_075272095.1\|4501412_4503005_-\|TIGR04222-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|275063
NZ_CP017310.1\|WP_011035760.1\|4491442_4491976_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017310.1\|WP_011035757.1\|4494172_4494445_+\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020

Protein	Function_ID	Function_description	E-value
NZ_CP017310.1\|WP_011035747.1\|4507187_4508771_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP017310.1\|WP_011035757.1\|4494172_4494445_+\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	3.72538e-51
NZ_CP017310.1\|WP_011035766.1\|4485947_4486430_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	7.59427e-76
NZ_CP017310.1\|WP_011269479.1\|4506497_4507112_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	3.78122e-19
NZ_CP017310.1\|WP_042597267.1\|4500136_4500769_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.78924e-34
NZ_CP017310.1\|WP_012437212.1\|4503345_4504683_-\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	gnl\|CDD\|350376	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases. This subfamily is composed of uncharacterized bacterial and plant dual-specificity protein phosphatases. DUSPs function as a protein-serine/threonine phosphatases (EC 3.1.3.16) and a protein-tyrosine-phosphatases (EC 3.1.3.48).	2.8015e-43
NZ_CP017310.1\|WP_011035755.1\|4499165_4500098_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|226955	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only].	5.97933e-126
NZ_CP017310.1\|WP_100101125.1\|4492749_4494057_+\|DUF3426-domain-containing-protein	gnl\|CDD\|378759	pfam11906, DUF3426, Protein of unknown function (DUF3426). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.	8.45643e-35
NZ_CP017310.1\|WP_040940515.1\|4486875_4488243_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP017310.1\|WP_014509172.1\|4486521_4486833_+\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	4.62397e-43
NZ_CP017310.1\|WP_011269480.1\|4500765_4501434_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	1.63115e-10
NZ_CP017310.1\|WP_011035759.1\|4492085_4492463_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.88605e-09
NZ_CP017310.1\|WP_075285252.1\|4504679_4506443_-\|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase	gnl\|CDD\|371922	pfam12147, Methyltransf_20, Putative methyltransferase. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The family shows homology to methyltransferases.	0
NZ_CP017310.1\|WP_011035761.1\|4490520_4491441_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	5.9931e-137
NZ_CP017310.1\|WP_075272095.1\|4501412_4503005_-\|TIGR04222-domain-containing-membrane-protein	gnl\|CDD\|275063	TIGR04222, integral_membrane_protein, TIGR04222 domain. The majority of the proteins with a domain as described by this model have an extreme C-terminal sequence that is consists of extremely low-complexity sequence, rich in Ser or in Gly interspersed with Cys. That C-terminal region resembles ribosomal natural product precursors, although there is no evidence that C-terminal regions of these proteins undergo any modification or have any such function.	2.14795e-39

>NZ_CP017310.1|WP_011035757.1|4494172_4494445_+|DNA-binding-transcriptional-regulator-Fis
MNAAPSRPDSSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGLT
>NZ_CP017310.1|WP_100101125.1|4492749_4494057_+|DUF3426-domain-containing-protein
MSETPPPRRPLATFLRAAPAAPPLVPTPPAPSTEPADTAVPAPESAPVAAPLAAPVPAPVRPLPAPPRSPEAAPPDAAARAPDTLIAPTRRDAPLSASPLPLPATPPAPVPVPVPVHSSAQTADPAMRRSADDRPTAAAAIAPAVVATSTAPLAPAAAAHATNAPDQPAIAAQSAASAPGATVTQTPQASPPANQDGQPAPAAPQAAPEAEAGASTEAELEADPDDTATTSTSASASASASTSTSTSTSTSTPASPSSSPTPAPTLEPAFARRGLVRPRLRASGWQWAVLVGLVLLLGLQIVIADRARLAGDARWRPLVSAACAVARCALPPWRDPATLTLLTRDVRPLPAYPGVLQIQASFRNDARWAQAWPWLQLSLSDADGRVIGTRVCSPQDYLGQAPAAQDTLAPGQAVQVAFRVREPAASTAAFSFDFR
>NZ_CP017310.1|WP_011035759.1|4492085_4492463_+|helix-turn-helix-transcriptional-regulator
MSKLYERVREARSLTKLTQEALAGELGVTRSAVAQWEMAEGTAPSVDNLIGLAKRSGMTFEYLATGRGERVFGPPVSSIAEEPAQYRHLDEQQRVLLSRFDALAPRQRTGLLDLLLAEGKPRRRR
>NZ_CP017310.1|WP_011035760.1|4491442_4491976_-|hypothetical-protein
MITTSQRTQGGAVMCKRLWGWRAAPRPKPVPPTPWPAYSPLDPAVARFAGAARYLVWRRDQDWTAVIDGLHWGPALAPRWWAWRHRHWRLLAAGMGVLGSAGGLWLASASAGGWLLAWAALGLVELGMRASAVRQASRWRCAALQRAGWQPVTQLRAISVEDAVTTARIRSGELRPE
>NZ_CP017310.1|WP_011035761.1|4490520_4491441_+|50S-ribosomal-protein-L11-methyltransferase
MPFLELTLPCTRATQPRFENALEDVGALAVTMLDAHAGTINERAILEPGVGEVRLWEETELTALFDGDSDPLMLLAALEAFDPSLDTRHATFRSVEDSAWERAWIDQFKPMRFGARTFIVPWNQDLPEEANTPDAAVVRLDPGLAFGSGTHQTTALCLRWLDALAGEGQLQGCSVLDFGCGSGILALAALKLGAANAVGVDYDPQALLATAENAERNAMEAQMQVYLPQDEPVQTYPVVLANILATALDALAETLAARVAPGGRIALSGIMQGQEQDLVQRYTPWFEHLHCEYDAEWVRIDGVRRH
>NZ_CP017310.1|WP_011035762.1|4489141_4490062_-|hypothetical-protein
MPLVRARHLWLLLAPAALAAAWWQARPQTAGVAPAAVVETAAAHVAPTAGQPHAVPERSAALQLARGTAGEPPQDLYRYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAVSPAGYAADSAWIASQPAPGVAAMHAARERVAQRCAGFAPSDGLSPRVVAQQRQAAARAGSLAAEAAMLALGEPLQTTPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLDGYVAGDQFAELAWQVAACRLGLDCSAQSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADKVDEMVDTLVTRSETQS
>NZ_CP017310.1|WP_011035763.1|4488779_4489145_-|hypothetical-protein
MNYRRLAHGAKFWFWVALFVAYSAAAVGIVMIDTADHRYQPLSVKRITVGADAQLRQHGASQVAAVYRASSGMPFASLPAGATFQVVWPDGSTETMTVVDPSSPSGAVPVPGSQQPAAKRR
>NZ_CP017310.1|WP_040940515.1|4486875_4488243_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MLDKVVIANRGEIALRILRACHTLGIRTVAVHSTVDRNLKHVAMADESVCIGPAASSDSYLNIPALIAAAEVTDAQAIHPGYGFLSENADFAERVEESGFIFIGPKADTIRLMGDKVEAIRAMKAAGVPCVPGSGGPLGDEIVANTKIAREIGYPVIIKAAGGGGGRGMRVVHSEAALKAAIETTKSEAKAAFSNDQVYMEKFLENPRHVEIQVLADGQGNAIHLGERDCSMQRRHQKVVEEAPAPGISEELRAEIGKVCVDACIRIGYRGAGTFEFLFEGGRFYFIEMNTRIQVEHPVTERITGIDLVCEQLRIAAGHKLSIKQSDIVLRGHAIECRINAEDPETFMPNPGLITAFHPPGGPGVRVDTHIYAGYKVPPNYDSMIGKLIVHGPDRETAIARMRVALSEMVVDGIKTNIPLQQRIMRDKGFQAGGQNIHYLEKRLAERKNKSIALV
>NZ_CP017310.1|WP_014509172.1|4486521_4486833_+|four-helix-bundle-protein
MIYRLTEVFPDQERYGLTAQLRRAAVSIPSNIAEGAARRSTPDYSRFLSIARGSLSELDTQVQIAARLGYSRSEDDQSVRRQVDLVFAKLTALMNALRRRGAA
>NZ_CP017310.1|WP_011035766.1|4485947_4486430_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDLRKIKKLIDLLEESNLAEIEIKEGEESVRLARVPKGTQVMSAPMQQYAPAPAAPAPAATMPMQSPTEASTGGAKQGAALPEGHVLRAPMVGTFYTSPSPDKPAFVTVGQQVKAGETLAIIEAMKMFNPIEADISGTIVAVLSDTGQPVEFDQPLFVIG
>NZ_CP017310.1|WP_011035755.1|4499165_4500098_-|phosphatidate-cytidylyltransferase
MHQQTLWLFSGIALVLVVATLISETLRWRARAQPSAVLDNLVARIRAWWVMAGVVGIAFVFGRAGVIGLFALVSLFALREFITLTPTRRGDYYALLAAFYIVLPWQYGLVWTGWYGMYTLLIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFCISHVPALLNLEIPGYAGRNLLLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVLSASLLGMALWWITPFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPVFFHLIRYGWA
>NZ_CP017310.1|WP_042597267.1|4500136_4500769_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIARLIARACSGAIRTLTGARALWRGCAPSNERRVYYGNHASHGDFVLIWSSLPASLRHEVRPVAAADYWQRTALRRYLIHAVFNGVLIERDAARRTRDPIECLCDAVDAGDSLILFPEGTRNPDEGVLPFKSGLYHLARQRPELEFVPVWIDNLKRVMPKGKWLPLPLLCTTTFGAPLRLEADEDKQAFLARAREALLALSPDQLEARA
>NZ_CP017310.1|WP_011269480.1|4500765_4501434_-|CDP-alcohol-phosphatidyltransferase-family-protein
MWRGRRLMAHETTGLRARQRQLARALRGRGATPNGVSWVGIAFAALAGLMFYIALSAPAREGAAPLLLALLGLQGRLWCNRLDGVLARQARLVSRAGEVYNDAPDRLSDVLVCIGLGYGLQASVPWAAQLGWAAALCCVATAYVRMLGLACGTAEPRQGPMSRVQRMHWLSLMTVLALPLQWMGQPRAAAWVLIGALAVLIAGAVLTVVLRLRMIVRALEWT
>NZ_CP017310.1|WP_075272095.1|4501412_4503005_-|TIGR04222-domain-containing-membrane-protein
MARHARPAAHAAAVRSLAGTGVGDRPAGQGDAVTAAPTVPLQATPEQHALWLRLQAYAFGPDADALPAFERRVAQQAHCSVAVAQQLVEEYRRFCFLACTSTAQATPSPLVDQVWHTHLTDTREYWDSFCPQVLQTTLHHQPGRGSAAEDARFQQQYRATLERYELQFGAPPALLWPAPRPAPTAVPAAHDDASAAALRALRGEPAPPSVRRLPRAVIGWAFAAAVAAWLAYSANGGVPQPLQWRGVHFLPFFITLIGLGWSTSAWLRRALRGGRARVVDAVDASEFAYLSGGADRVADLLFTELLVRNAVYLDRDEDAQARRWVRWQPRIAVPPALEPALQALRSAEDPTVAWQALRGLAGPVRQQLIDKGLWLAPGAARWVRAVSTVPVAVVWVLGACKLVIGVQGGSPVGYLLGCMVLTSVLVLGFLLVPVRRTLSGDARLQARRQAVRRDAARTGADPGEAVALYGTVALVGTPWASYHEIRAPNTHHHDSTGSSCGGGGDGGDGGGGDSGGDGGGGCGGCGGGGD
>NZ_CP017310.1|WP_012437213.1|4502905_4503349_-|hypothetical-protein
MTAVVTLASMRALLRQGAAVDRCAVLLLAAAVLLLGITDAPTVVQVAYALSALAGLAQRYWAFRVGLDADLLDAVLGQLERGHTDDAQAAQQLDQALQDIGLLRHAPPVRDWAARWRGMRGLLRTQLLCAALQVLALAIGLLAKGML
>NZ_CP017310.1|WP_012437212.1|4503345_4504683_-|phosphatase-PAP2/dual-specificity-phosphatase-family-protein
MSAGARPFARAALWLAVLGLFFFLSYGLANTLAGRAASVPSVVFGWEHGMPFWPWTIVPYWSIDVFYAVSFFTCRTRRQLDTHALRLFTAQLLCVSCFLLWPLRYSFVRPDTEGVFGWLFAVLLGFDKPYNQAPSLHIVLLVVLWVRYGAQLQGVWRWLLHGWFALIGISVLTTYQHHFIDVPTGLAAGWLCVWLWPERIAAPWTDARLARDPRRWRLAALYLAGAGVTAGMALWLGGAALWLLWMSGALLLVALNYALLGPGGFQKRSDGQLSLAARWLYAPYLLAAWCNSRLWTRRAPLPRAVCDDVWLGRIPLPAQRAAFAVVVDVSAELSLRHAHANDRIIPMLDLVAPAPASLRAAAQAIEAARAHGSVLVCCALGYSRSAASVVTWLVLSQRAASVSEAMAWVRAARPSIVLGPHHQAAIAAACAGDAAADAPIAQVPA
>NZ_CP017310.1|WP_075285252.1|4504679_4506443_-|bifunctional-alpha/beta-hydrolase/class-I-SAM-dependent-methyltransferase
MRTVVEREFASFDGAPLFYRHWPVQAAADAATPPKAVVLLHRGHEHSGRVMHLAEELQLPDAQFFAWDARGNGRSPGARGDAPGFDALVRDLDSFIAHIGATHGIAVQDIVVIAQSVGAVVASTWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALMQALRGNFFVNSYVKPQWLTHDPARVDSYRTDPLITRPISVRVLLGLYAAGDRVVADAQAITVPTQLLVSGADFVVHRGPQDRFYENLRSPIKQRHFLPGFFHDTLGERDRAVAITQIRQFVSERFAQPPVRADLRDAHRAGPSFEEAERLAWPSQRNSLQDLRWRGVRAGLRLGGTLSEGIALGLQTGFDSGSTLDYIYRNQARGRGPLGRMIDRNYLNAIGWRGIRIRGAHLGELLRATATRLRQAGQPVRVLDIAAGHGRYVLEALGSGAQRADAIVLRDFSPLNVTQGAALIQALGAGDIARFEQGDAFDPVSVGAVDPAPTLAVVSGLYELFADNDQVARSLAGVAAAVPPGGYLLYTGQPWHPQLEFIARALTSHRDGVAWVMRRRSQQEMDGLVEAAGFRKVDQRIDAFGIFTVSLAQRINA
>NZ_CP017310.1|WP_011269479.1|4506497_4507112_-|CDP-alcohol-phosphatidyltransferase-family-protein
MASIYALKGRFQDLLRPMVGALYRGGITANQVTLIAAAISVLVAAVVYRAGTSWPLLYLLLPVWMLLRMALNAIDGMLAREFGQQSRLGAYLNELCDVVADATLYLSLLGVPGVNASALWSFALLAALTEYAGVLGLMVGAGRRYDGPMGKSDRAFVIGALGLALAFGLLGGHGVTGVALLLCLACAATVWRRVRAGLADAAAR
>NZ_CP017310.1|WP_011035747.1|4507187_4508771_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MASDFLPVRRALLSVSDKTGLIDLARALVARNVELLSTGGTAKAIRDAGLPVKDVAELTGFPEMMDGRVKTLHPLVHGGLLGRAGVDEAVMAEHGIAPIDLLVLNLYPFESVTAKADCTLADAVENIDIGGPAMLRSAAKNFARVAVATDPAQYADLLAELEANNGQLSAAQRFALSVAAFNRVAQYDAAISNYLSAVADSAESVPTRSPFPAQINSNFIKVMDLRYGENPHQSGAFYRDLYPVPGTLATFQQLQGKELSYNNLADADAAWECVRQFDAPACVIVKHANPCGVAVGVACGDAYELAYATDPTSAFGGILAFNRTLDAATAKAILDRQFVEVLIAPDYEPGALDYATKKANVRVLKIPHGAGLNNYDTKRIGSGLLMQSADNRGMSLGELSVVTKRAPSDAELADLLFAWRVAKYVKSNAIVYAKDSRTIGVGAGQMSRVVSAKIAALKAEEAKLTVAGSVMASDAFFPFRDGIDAAAAAGIQAVIQPGGSMRDGEVIAAADEHGLAMVFTGVRHFRH
>NZ_CP017310.1|WP_012437210.1|4508794_4509640_+|hypothetical-protein
MHRSHALAALLAAAALLGGCKQAPAPTAAPATKAPATPAATPHLSRTARLEAFVRTRYGDKASLSADWAGEADGFKANSQVCAEQPAVVGEQVQQLLAVCHSLSDGGHGNPGLVDFFVLRGEGDGFKVVAEKLSDTFGSDGQPGSVDILHLGSDFYGFIVHSFWMGQGLLLESQDLVVPGPKGLANAGSLRAHIDNSGSISCEDDAREPDQTEAQCRAEAFNVDFTLDVDSSNIQARTWPLQIHEHGTDCGVALDTTHTFALDTKTWTYPFPNALQREDCR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017310_3	3.2\|4496658\|25\|NZ_CP017310\|CRISPRCasFinder	4496658-4496682	25	NZ_CP017310.1	4496514-4496538	1	0.96
NZ_CP017310_3	3.2\|4496658\|25\|NZ_CP017310\|CRISPRCasFinder	4496658-4496682	25	NZ_CP017310.1	4495938-4495962	2	0.92
NZ_CP017310_3	3.3\|4496706\|25\|NZ_CP017310\|CRISPRCasFinder	4496706-4496730	25	NZ_CP017310.1	4496562-4496586	2	0.92
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_CP017310.1	4496130-4496154	2	0.92
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_CP017310.1	4496418-4496442	2	0.92

1. spacer 3.2|4496658|25|NZ_CP017310|CRISPRCasFinder matches to position: 4496514-4496538, mismatch: 1, identity: 0.96

gtcactgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgtgcggtctgc	Protospacer
***.*********************

2. spacer 3.2|4496658|25|NZ_CP017310|CRISPRCasFinder matches to position: 4495938-4495962, mismatch: 2, identity: 0.92

gtcactgcccttgcgtgcggtctgc	CRISPR spacer
gtcactgcccttacgcgcggtctgc	Protospacer
************.**.*********

3. spacer 3.3|4496706|25|NZ_CP017310|CRISPRCasFinder matches to position: 4496562-4496586, mismatch: 2, identity: 0.92

cgaactctcgctacccgaggtctgc	CRISPR spacer
cgaactctcgccaccggaggtctgc	Protospacer
***********.*** *********

4. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to position: 4496130-4496154, mismatch: 2, identity: 0.92

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactttccccgccggaggtctgg	Protospacer
****** ***********.******

5. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to position: 4496418-4496442, mismatch: 2, identity: 0.92

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactgtcgccgccggaggtctgg	Protospacer
********* ********.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	330913-330938	3	0.885
NZ_CP017310_3	3.1\|4496610\|25\|NZ_CP017310\|CRISPRCasFinder	4496610-4496634	25	ASHF01000034	Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence	50549-50573	3	0.88
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	27409-27433	3	0.88
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	209397-209421	3	0.88
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_CP005087	Sphingobium sp. TKS plasmid pTK3, complete sequence	11418-11442	3	0.88
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_CP005088	Sphingobium sp. TKS plasmid pTK4, complete sequence	65195-65219	3	0.88
NZ_CP017310_3	3.8\|4496946\|25\|NZ_CP017310\|CRISPRCasFinder	4496946-4496970	25	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	152062-152086	3	0.88
NZ_CP017310_3	3.8\|4496946\|25\|NZ_CP017310\|CRISPRCasFinder	4496946-4496970	25	NZ_CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	107106-107130	3	0.88
NZ_CP017310_3	3.8\|4496946\|25\|NZ_CP017310\|CRISPRCasFinder	4496946-4496970	25	NZ_CP005987	Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence	163970-163994	3	0.88
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	243232-243256	3	0.88
NZ_CP017310_3	3.14\|4497234\|25\|NZ_CP017310\|CRISPRCasFinder	4497234-4497258	25	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	378085-378109	3	0.88
NZ_CP017310_3	3.14\|4497234\|25\|NZ_CP017310\|CRISPRCasFinder	4497234-4497258	25	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	143684-143708	3	0.88
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NZ_CP010990	Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence	69855-69879	3	0.88
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	16607-16631	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	250941-250965	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	460308-460332	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP023450	Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p1, complete sequence	132960-132984	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP010956	Sphingobium sp. YBL2 plasmid 2pYBL2-2, complete sequence	175194-175218	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP005190	Sphingobium sp. MI1205 plasmid pMI1, complete sequence	41928-41952	3	0.88
NZ_CP017310_3	3.20\|4497522\|25\|NZ_CP017310\|CRISPRCasFinder	4497522-4497546	25	NZ_CP041018	Sphingobium fuliginis ATCC 27551 plasmid pSF1, complete sequence	158454-158478	3	0.88
NZ_CP017310_3	3.21\|4497570\|25\|NZ_CP017310\|CRISPRCasFinder	4497570-4497594	25	NZ_CP032230	Streptomyces seoulensis strain KCTC 9819 plasmid unnamed	51121-51145	3	0.88
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP015530	Rhodococcus sp. WB1 plasmid pWB1, complete sequence	127163-127188	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1426578-1426603	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP015280	Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence	43423-43448	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP023153	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence	31060-31085	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP019224	Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence	76165-76190	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP041605	Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence	41361-41386	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1513932-1513957	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_LT703507	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3	64690-64715	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP015273	Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence	56914-56939	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	42154-42179	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP029333	Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence	105664-105689	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP045964	Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence	48157-48182	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	500359-500384	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NC_022654	Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence	48697-48722	4	0.846
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	KY965934	Halorubrum pleomorphic virus 9 strain B2-2/SS5-4, complete genome	7267-7292	4	0.846
NZ_CP017310_3	3.1\|4496610\|25\|NZ_CP017310\|CRISPRCasFinder	4496610-4496634	25	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	118257-118281	4	0.84
NZ_CP017310_3	3.1\|4496610\|25\|NZ_CP017310\|CRISPRCasFinder	4496610-4496634	25	NZ_CP021815	Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence	49071-49095	4	0.84
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5969600-5969624	4	0.84
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1420670-1420694	4	0.84
NZ_CP017310_3	3.4\|4496754\|25\|NZ_CP017310\|CRISPRCasFinder	4496754-4496778	25	NZ_CP004394	Celeribacter indicus strain P73 plasmid pP73A, complete sequence	152689-152713	4	0.84
NZ_CP017310_3	3.5\|4496802\|25\|NZ_CP017310\|CRISPRCasFinder	4496802-4496826	25	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	156372-156396	4	0.84
NZ_CP017310_3	3.7\|4496898\|25\|NZ_CP017310\|CRISPRCasFinder	4496898-4496922	25	NC_015382	Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence	69011-69035	4	0.84
NZ_CP017310_3	3.7\|4496898\|25\|NZ_CP017310\|CRISPRCasFinder	4496898-4496922	25	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	911990-912014	4	0.84
NZ_CP017310_3	3.9\|4496994\|25\|NZ_CP017310\|CRISPRCasFinder	4496994-4497018	25	MN062720	Microbacterium phage FuzzBuster, complete genome	23698-23722	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	68382-68406	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	186792-186816	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	315946-315970	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP029234	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence	73358-73382	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	41925-41949	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1577504-1577528	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	68399-68423	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP045095	Streptomyces sp. GY16 plasmid unnamed1, complete sequence	1473-1497	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	135413-135437	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1505773-1505797	4	0.84
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	70068-70092	4	0.84
NZ_CP017310_3	3.13\|4497186\|25\|NZ_CP017310\|CRISPRCasFinder	4497186-4497210	25	NC_008537	Arthrobacter sp. FB24 plasmid 1, complete sequence	94006-94030	4	0.84
NZ_CP017310_3	3.13\|4497186\|25\|NZ_CP017310\|CRISPRCasFinder	4497186-4497210	25	NC_008538	Arthrobacter sp. FB24 plasmid 2, complete sequence	37310-37334	4	0.84
NZ_CP017310_3	3.13\|4497186\|25\|NZ_CP017310\|CRISPRCasFinder	4497186-4497210	25	NC_008539	Arthrobacter sp. FB24 plasmid 3, complete sequence	33091-33115	4	0.84
NZ_CP017310_3	3.16\|4497330\|25\|NZ_CP017310\|CRISPRCasFinder	4497330-4497354	25	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	395981-396005	4	0.84
NZ_CP017310_3	3.17\|4497378\|25\|NZ_CP017310\|CRISPRCasFinder	4497378-4497402	25	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	351573-351597	4	0.84
NZ_CP017310_3	3.17\|4497378\|25\|NZ_CP017310\|CRISPRCasFinder	4497378-4497402	25	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	52264-52288	4	0.84
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NZ_CP046256	Sphingobium sp. CAP-1 plasmid p3, complete sequence	125194-125218	4	0.84
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NZ_CP022748	Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence	107885-107909	4	0.84
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	59811-59835	4	0.84
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	MN204501	Gordonia phage Chikenjars, complete genome	29380-29404	4	0.84
NZ_CP017310_3	3.19\|4497474\|25\|NZ_CP017310\|CRISPRCasFinder	4497474-4497498	25	NC_048793	Gordonia phage Kenosha, complete genome	29930-29954	4	0.84
NZ_CP017310_3	3.21\|4497570\|25\|NZ_CP017310\|CRISPRCasFinder	4497570-4497594	25	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	859763-859787	4	0.84
NZ_CP017310_3	3.21\|4497570\|25\|NZ_CP017310\|CRISPRCasFinder	4497570-4497594	25	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	461680-461704	4	0.84
NZ_CP017310_2	2.2\|4495188\|26\|NZ_CP017310\|CRT	4495188-4495213	26	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	478112-478137	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1490973-1490998	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1411983-1412008	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	51483-51508	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1411005-1411030	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1411975-1412000	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1411328-1411353	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1411966-1411991	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	802055-802080	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1491132-1491157	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	215870-215895	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1491113-1491138	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NC_009479	Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2, complete sequence	38771-38796	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1491096-1491121	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	MK686071	Streptomyces phage Mischief19, complete genome	26392-26417	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NC_010408	Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence	8830-8855	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NC_018023	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence	68071-68096	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1817125-1817150	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	36212-36237	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	191887-191912	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	1003119-1003144	5	0.808
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1330334-1330359	5	0.808
NZ_CP017310_3	3.1\|4496610\|25\|NZ_CP017310\|CRISPRCasFinder	4496610-4496634	25	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	297223-297247	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_KY296095	Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence	40969-40993	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	MK882885	Pseudomonas aeruginosa plasmid YLH6_p3, complete sequence	38468-38492	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_CP024631	Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence	16093-16117	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_CP020561	Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence	37490-37514	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_MN433456	Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence	21314-21338	5	0.8
NZ_CP017310_3	3.6\|4496850\|25\|NZ_CP017310\|CRISPRCasFinder	4496850-4496874	25	NZ_MH734334	Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence	54715-54739	5	0.8
NZ_CP017310_3	3.8\|4496946\|25\|NZ_CP017310\|CRISPRCasFinder	4496946-4496970	25	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	281685-281709	5	0.8
NZ_CP017310_3	3.8\|4496946\|25\|NZ_CP017310\|CRISPRCasFinder	4496946-4496970	25	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	426616-426640	5	0.8
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	694675-694699	5	0.8
NZ_CP017310_3	3.11\|4497090\|25\|NZ_CP017310\|CRISPRCasFinder	4497090-4497114	25	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	123372-123396	5	0.8
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	298050-298075	6	0.769
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	MK002701	Halobacterium phage phiH variant phiH1, complete genome	8725-8750	6	0.769
NZ_CP017310_2	2.4\|4495284\|26\|NZ_CP017310\|CRT	4495284-4495309	26	X80162	Bacteriophage phi-H hp32 gene	2417-2442	6	0.769

1. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 3, identity: 0.885

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gctcttggtgccgtcggcgccggcga	Protospacer
* *** *****.**************

2. spacer 3.1|4496610|25|NZ_CP017310|CRISPRCasFinder matches to ASHF01000034 (Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtccgcaccggcggtcgag	CRISPR spacer
gcggctgtccgcaccggcggtcggg	Protospacer
*  ********************.*

3. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
agtgctgtccgagccgccggtcgag	Protospacer
.********** **** ********

4. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
gtcgctgtccgcgccgccggtcgag	Protospacer
* .************* ********

5. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP005087 (Sphingobium sp. TKS plasmid pTK3, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
gttgctggcggcgccggcggtcgag	Protospacer
* ***** * ***************

6. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP005088 (Sphingobium sp. TKS plasmid pTK4, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
gttgctggcggcgccggcggtcgag	Protospacer
* ***** * ***************

7. spacer 3.8|4496946|25|NZ_CP017310|CRISPRCasFinder matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccggtacgggcggtttgg	CRISPR spacer
atcggtgccggtatgggcggtttgg	Protospacer
.*** ********.***********

8. spacer 3.8|4496946|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP026329 (Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccggtacgggcggtttgg	CRISPR spacer
atcggtgccggtatgggcggtttgg	Protospacer
.*** ********.***********

9. spacer 3.8|4496946|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP005987 (Acidithiobacillus caldus ATCC 51756 plasmid megap mpAca1.1, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccggtacgggcggtttgg	CRISPR spacer
atcggtgccggtatgggcggtttgg	Protospacer
.*** ********.***********

10. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
gtagctgccgtcctgcaccgtctcc	Protospacer
** *************.****** *

11. spacer 3.14|4497234|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccgttctgcgcggtttgg	CRISPR spacer
ttcgctgccgttctgcgcggtcagg	Protospacer
 ********************. **

12. spacer 3.14|4497234|25|NZ_CP017310|CRISPRCasFinder matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 3, identity: 0.88

gtcgctgccgttctgcgcggtttgg	CRISPR spacer
ttcgctgccgttctgcgcggtcagg	Protospacer
 ********************. **

13. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtcggatccggccacgccg	CRISPR spacer
gatgccgttggatccggccacgccg	Protospacer
*.***.**.****************

14. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtcggatccggccacgccg	CRISPR spacer
gctgctggcggatccggccaagccg	Protospacer
* ***** ************ ****

15. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
ttcgctgcccttcgccgcggtctcg	Protospacer
.******** *** ***********

16. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
ttcgctgcccttcgccgcggtctcg	Protospacer
.******** *** ***********

17. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP023450 (Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
cacgctgccgttcaccgcggtcgcg	Protospacer
* *********** ******** **

18. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP010956 (Sphingobium sp. YBL2 plasmid 2pYBL2-2, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
cacgctgccgttcaccgcggtcgcg	Protospacer
* *********** ******** **

19. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP005190 (Sphingobium sp. MI1205 plasmid pMI1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
cacgctgccgttcaccgcggtcgcg	Protospacer
* *********** ******** **

20. spacer 3.20|4497522|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP041018 (Sphingobium fuliginis ATCC 27551 plasmid pSF1, complete sequence) position: , mismatch: 3, identity: 0.88

ctcgctgccgttccccgcggtctcg	CRISPR spacer
cacgctgccgttcaccgcggtcgcg	Protospacer
* *********** ******** **

21. spacer 3.21|4497570|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP032230 (Streptomyces seoulensis strain KCTC 9819 plasmid unnamed) position: , mismatch: 3, identity: 0.88

ctgactctgatcggcgccagtgagc	CRISPR spacer
ctgactctgatcggcgcccgtgtgt	Protospacer
****************** *** *.

22. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP015530 (Rhodococcus sp. WB1 plasmid pWB1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggggtgggtgctgtcggcgcgggcga	Protospacer
*.  **************** *****

23. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
cagctgggtgccgtcggcgccgggga	Protospacer
 * ********.*********** **

24. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP015280 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

25. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP023153 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_2, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

26. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP019224 (Mycobacterium chimaera strain CDC 2015-22-71 plasmid pDHQP20152271_1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

27. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP041605 (Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gatctggtcgctgtcggcgccggtca	Protospacer
******* .**************. *

28. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gagcggggtgctgtcggcgccggggg	Protospacer
** * ****************** *.

29. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_LT703507 (Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 3) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

30. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP015273 (Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

31. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

32. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

33. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP045964 (Mycobacterium chimaera strain AUSMDU00007395 plasmid pAUSMDU00007395_01, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

34. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gtacagggtgccgtcggcgccggcga	Protospacer
*  * ******.**************

35. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtggtgtcggggccggcga	Protospacer
*..******* ****** ********

36. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to KY965934 (Halorubrum pleomorphic virus 9 strain B2-2/SS5-4, complete genome) position: , mismatch: 4, identity: 0.846

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gtactgggtactgtcggcgccggaga	Protospacer
*  ******.************* **

37. spacer 3.1|4496610|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtccgcaccggcggtcgag	CRISPR spacer
ggtgctggccgcacaggcggtcgcc	Protospacer
******* ****** ********

38. spacer 3.1|4496610|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP021815 (Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtccgcaccggcggtcgag	CRISPR spacer
aggtctgtccgcaccggcggtcgtg	Protospacer
.*  ******************* *

39. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
ggtgctgtccgcgtcggcggtgctg	Protospacer
*************.*******   *

40. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
gtccctgtccgcgccgccggtcgag	Protospacer
* . ************ ********

41. spacer 3.4|4496754|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP004394 (Celeribacter indicus strain P73 plasmid pP73A, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtccgcgccggcggtcgag	CRISPR spacer
tttgctgtccgcgccggcgatggag	Protospacer
  *****************.* ***

42. spacer 3.5|4496802|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctacccttgcgcgcggtttgg	CRISPR spacer
gacgctacccttgcgcgcgttttca	Protospacer
* ***************** *** .

43. spacer 3.7|4496898|25|NZ_CP017310|CRISPRCasFinder matches to NC_015382 (Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence) position: , mismatch: 4, identity: 0.84

cgtgctgtccgcaccagcggtggat	CRISPR spacer
cgtgatgtccgcaccagcggcgggg	Protospacer
**** ***************.**.

44. spacer 3.7|4496898|25|NZ_CP017310|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 4, identity: 0.84

cgtgctgtccgcaccagcggtggat	CRISPR spacer
cgggctgtccgccccagcggtggcg	Protospacer
** ********* **********

45. spacer 3.9|4496994|25|NZ_CP017310|CRISPRCasFinder matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 4, identity: 0.84

cgagctgtcgttgccggatgtctgc	CRISPR spacer
cgacctgtcgatgccggatgtctcg	Protospacer
*** ****** ************

46. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ggcgctgcggtcctgcgccgtctcg	Protospacer
* ****** **************

47. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ggcgctgccgtccggcgccgtctcg	Protospacer
* *********** *********

48. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ctcgccgacgtcctgcgccgtctgg	Protospacer
 ****.* ****************

49. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP029234 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
gatcctgccgtcctgcgccgcctgc	Protospacer
* . ****************.****

50. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
tccgctgccgtgctgggccgtctgc	Protospacer
 .********* *** *********

51. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ctcgccgacgtcctgcgccgtctgg	Protospacer
 ****.* ****************

52. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
gtcgatgccgtcctgcgccggctcg	Protospacer
**** *************** **

53. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP045095 (Streptomyces sp. GY16 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ctcgctggcgtcctgcgccgtcctc	Protospacer
 ****** **************. *

54. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ggcgctgcggtcctgcgccgtctcg	Protospacer
* ****** **************

55. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ctcgccgacgtcctgcgccgtctgg	Protospacer
 ****.* ****************

56. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
ctcgccgacgtcctgcgccgtctgg	Protospacer
 ****.* ****************

57. spacer 3.13|4497186|25|NZ_CP017310|CRISPRCasFinder matches to NC_008537 (Arthrobacter sp. FB24 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.84

cgagctatcggtgcccgccgtgctg	CRISPR spacer
gcagctatcggtgcccgccgcgccg	Protospacer
  ******************.**.*

58. spacer 3.13|4497186|25|NZ_CP017310|CRISPRCasFinder matches to NC_008538 (Arthrobacter sp. FB24 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.84

cgagctatcggtgcccgccgtgctg	CRISPR spacer
gcagctatcggtgcccgccgcgccg	Protospacer
  ******************.**.*

59. spacer 3.13|4497186|25|NZ_CP017310|CRISPRCasFinder matches to NC_008539 (Arthrobacter sp. FB24 plasmid 3, complete sequence) position: , mismatch: 4, identity: 0.84

cgagctatcggtgcccgccgtgctg	CRISPR spacer
gcagctatcggtgcccgccgcgccg	Protospacer
  ******************.**.*

60. spacer 3.16|4497330|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

cgagctgtctgcaccggcggtttcc	CRISPR spacer
cgacctgtctgcaccggcggttctg	Protospacer
*** ******************..

61. spacer 3.17|4497378|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcgctgccattgcgggcggtctgt	CRISPR spacer
atcgctgccatcgcgggcggtcagc	Protospacer
 **********.********** *.

62. spacer 3.17|4497378|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ctcgctgccattgcgggcggtctgt	CRISPR spacer
atcgctgccatcgcgggcggtcagc	Protospacer
 **********.********** *.

63. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP046256 (Sphingobium sp. CAP-1 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggatccggccacgccg	CRISPR spacer
ccggctgtccgatccggccacgccg	Protospacer
   ****** ***************

64. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP022748 (Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggatccggccacgccg	CRISPR spacer
ccggctgtccgatccggccacgccg	Protospacer
   ****** ***************

65. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggatccggccacgccg	CRISPR spacer
ccggctgtccgatccggccacgccg	Protospacer
   ****** ***************

66. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to MN204501 (Gordonia phage Chikenjars, complete genome) position: , mismatch: 4, identity: 0.84

ggtgctgtcggatccggccacgccg	CRISPR spacer
ggtgctgttggatcctgccacgcac	Protospacer
********.****** *******

67. spacer 3.19|4497474|25|NZ_CP017310|CRISPRCasFinder matches to NC_048793 (Gordonia phage Kenosha, complete genome) position: , mismatch: 4, identity: 0.84

ggtgctgtcggatccggccacgccg	CRISPR spacer
ggtgctgttggatcccgccacgcac	Protospacer
********.****** *******

68. spacer 3.21|4497570|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.84

ctgactctgatcggcgccagtgagc	CRISPR spacer
gagactctggtcggcgccagcgagc	Protospacer
  *******.**********.****

69. spacer 3.21|4497570|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.84

ctgactctgatcggcgccagtgagc	CRISPR spacer
gagactctggtcggcgccagcgagc	Protospacer
  *******.**********.****

70. spacer 2.2|4495188|26|NZ_CP017310|CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 5, identity: 0.808

catcagcgtgcaatcgtcacctgcgg	CRISPR spacer
gatcagcgtgcagtcgtcaccttctt	Protospacer
 ***********.********* *

71. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

72. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

73. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtgctgtcggcggcggcct	Protospacer
*..**************** ****

74. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

75. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

76. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

77. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

78. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gatctggctgctgtcggcgctggacc	Protospacer
******* ************.**

79. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

80. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tatgtcggtgctgtcggcgccggctt	Protospacer
 ** * ******************

81. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

82. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NC_009479 (Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
cctctgggtgctgtcggcgctcgcgc	Protospacer
  ******************. ***

83. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
tggctgggtgtggtcggcgccggcga	Protospacer
 . *******. **************

84. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to MK686071 (Streptomyces phage Mischief19, complete genome) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
catctcggtgctgtcggcgccgcagc	Protospacer
 **** ****************  *

85. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NC_010408 (Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
cctctgggtgctctcggcgctggcgc	Protospacer
  ********** *******.****

86. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NC_018023 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ccgctgggtgctgtctgcggcggcga	Protospacer
   ************ *** ******

87. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gatctggccgctgtcggcgccggacc	Protospacer
******* .**************

88. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggtctgggtgctgtccgcgccggatg	Protospacer
*.************* *******  .

89. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggcctgggtgctgtcggcggcggcct	Protospacer
*..**************** ****

90. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
ggtctgggtgctttcggcgccggacg	Protospacer
*.********** **********  .

91. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 5, identity: 0.808

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gatctggctgctgtcggcgctggacc	Protospacer
******* ************.**

92. spacer 3.1|4496610|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 5, identity: 0.8

ggtgctgtccgcaccggcggtcgag	CRISPR spacer
agttctgtccgcaccggcggtcttt	Protospacer
.** ******************

93. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to NZ_KY296095 (Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

94. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to MK882885 (Pseudomonas aeruginosa plasmid YLH6_p3, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

95. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP024631 (Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

96. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP020561 (Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

97. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to NZ_MN433456 (Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

98. spacer 3.6|4496850|25|NZ_CP017310|CRISPRCasFinder matches to NZ_MH734334 (Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence) position: , mismatch: 5, identity: 0.8

cgaactgtccccgccggaagtctgg	CRISPR spacer
cgaactggccccgccggaagtgcac	Protospacer
******* ************* ..

99. spacer 3.8|4496946|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 5, identity: 0.8

gtcgctgccggtacgggcggtttgg	CRISPR spacer
ggggctgccggtacgggcggttcct	Protospacer
*  *******************.

100. spacer 3.8|4496946|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 5, identity: 0.8

gtcgctgccggtacgggcggtttgg	CRISPR spacer
aacgctgccggtacgggcggattcc	Protospacer
. ****************** **

101. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 5, identity: 0.8

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
cttgctgccgtcctgcgccgtcgcg	Protospacer
 *.*******************

102. spacer 3.11|4497090|25|NZ_CP017310|CRISPRCasFinder matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 5, identity: 0.8

gtcgctgccgtcctgcgccgtctgc	CRISPR spacer
agcgctgcggtcctgcgccgtctcg	Protospacer
. ****** **************

103. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.769

gatctgggtgctgtcggcgccggcga	CRISPR spacer
atggtgggtgctgtcggcggcggcgg	Protospacer
.   *************** *****.

104. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to MK002701 (Halobacterium phage phiH variant phiH1, complete genome) position: , mismatch: 6, identity: 0.769

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gccgctggtgctgtcggcgccggcgt	Protospacer
* . . *******************

105. spacer 2.4|4495284|26|NZ_CP017310|CRT matches to X80162 (Bacteriophage phi-H hp32 gene) position: , mismatch: 6, identity: 0.769

gatctgggtgctgtcggcgccggcga	CRISPR spacer
gccgctggtgctgtcggcgccggcgt	Protospacer
* . . *******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

823270 : 833131

Enterobacteria_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019237974.1\|823270_824374_-	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	1.1e-45	33.2
WP_011035861.1\|824422_824770_-	WxcH protein	NA	NA	NA	NA
WP_019237972.1\|824829_825774_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_011035863.1\|825773_826520_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_012439278.1\|826748_827804_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.0e-82	47.6
WP_075286172.1\|827867_828755_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.2e-94	57.8
WP_011035866.1\|828751_829309_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.3e-43	49.4
WP_075286171.1\|829305_830214_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	1.5e-29	33.9
WP_011035868.1\|830335_831739_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.1e-47	29.9
WP_040941821.1\|831784_833131_-	phosphohexose mutase	A0A127AWJ1	Bacillus_phage	1.6e-30	26.2

DBSCAN-SWA_2

2067448 : 2077924

Micromonas_pusilla_virus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011036897.1\|2067448_2069125_+	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	9.3e-41	27.7
WP_011269877.1\|2069191_2069833_+	transcriptional repressor LexA	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
WP_011036899.1\|2070005_2071037_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.6e-112	61.3
WP_011036900.1\|2071152_2071641_+	recombination regulator RecX	NA	NA	NA	NA
WP_012438559.1\|2071742_2074391_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	2.4e-83	39.8
WP_011036902.1\|2074532_2074745_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	1.5e-12	65.5
WP_011036903.1\|2075959_2077924_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-12	43.6

DBSCAN-SWA_3

2217953 : 2288858

uncultured_Caudovirales_phage(50.0%)

transposase,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075285726.1\|2217953_2219471_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	8.6e-86	38.5
WP_011037024.1\|2219609_2220746_+	two-component system response regulator	NA	NA	NA	NA
WP_011037025.1\|2220747_2221371_+	RpfH protein	NA	NA	NA	NA
WP_012438292.1\|2221378_2223559_+	response regulator	A0A1V0SGX0	Hokovirus	2.2e-50	34.7
WP_011037027.1\|2223571_2224441_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_011037028.1\|2224617_2226300_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.0e-31	31.2
WP_075285725.1\|2226331_2226841_+	hypothetical protein	NA	NA	NA	NA
WP_075285724.1\|2227030_2229799_-	aconitate hydratase AcnA	NA	NA	NA	NA
WP_011037031.1\|2229947_2230205_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_011037032.1\|2230201_2230609_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_050912247.1\|2230661_2233253_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_011037034.1\|2233448_2234264_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_100101043.1\|2234433_2235648_+\|transposase	IS4-like element IS1481A family transposase	A0A0F7LAS3	uncultured_marine_virus	2.7e-50	31.5
WP_011037035.1\|2235872_2238053_-	EAL domain-containing protein	NA	NA	NA	NA
WP_011037036.1\|2238160_2239237_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_024937701.1\|2239233_2239830_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_075285723.1\|2239826_2240696_-	chemotaxis protein CheR	NA	NA	NA	NA
WP_075285722.1\|2240889_2243262_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	3.5e-09	60.0
WP_010365266.1\|2243341_2243686_-	hypothetical protein	NA	NA	NA	NA
WP_011037040.1\|2244039_2244525_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_075285721.1\|2244636_2245434_-	flagellar brake protein	NA	NA	NA	NA
WP_075286551.1\|2246048_2246240_-	hypothetical protein	NA	NA	NA	NA
WP_075285718.1\|2246490_2249163_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	5.1e-09	40.1
WP_075285717.1\|2249627_2251883_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.8e-10	50.5
WP_100097356.1\|2252626_2255101_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-10	56.0
WP_075285716.1\|2255189_2257436_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-11	49.5
WP_075285715.1\|2257903_2260162_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	3.9e-10	52.4
WP_075285714.1\|2260393_2263129_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.6e-11	56.3
WP_075286547.1\|2263242_2265294_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.7e-13	38.8
WP_050911523.1\|2266152_2266686_-	hypothetical protein	NA	NA	NA	NA
WP_075285713.1\|2266923_2269188_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.7e-08	55.9
WP_075285712.1\|2269637_2271641_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_002806565.1\|2271674_2272040_-	response regulator	W8CYM9	Bacillus_phage	2.7e-14	39.3
WP_075285711.1\|2272036_2272345_-	STAS domain-containing protein	NA	NA	NA	NA
WP_075285710.1\|2272442_2273672_-	chemotaxis protein	NA	NA	NA	NA
WP_011269794.1\|2273668_2274451_-	ParA family protein	Q8JL10	Natrialba_phage	5.9e-14	37.1
WP_011037058.1\|2274452_2275427_-	flagellar motor protein MotD	NA	NA	NA	NA
WP_012438311.1\|2275434_2276175_-	flagellar motor protein	NA	NA	NA	NA
WP_075286545.1\|2277099_2280141_+	TonB-dependent receptor	NA	NA	NA	NA
WP_011037061.1\|2280655_2281192_+	hypothetical protein	NA	NA	NA	NA
WP_011037062.1\|2281188_2281992_+	hypothetical protein	NA	NA	NA	NA
WP_011035386.1\|2282038_2283253_-\|transposase	IS4-like element IS1481A family transposase	A0A0F7LAS3	uncultured_marine_virus	2.7e-50	31.5
WP_087942065.1\|2283527_2284635_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.9e-43	37.9
WP_011038664.1\|2284592_2285003_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_012437264.1\|2285167_2286049_-	hypothetical protein	NA	NA	NA	NA
WP_075286263.1\|2286592_2287291_-\|transposase	transposase	NA	NA	NA	NA
WP_087942069.1\|2287726_2288858_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1

DBSCAN-SWA_4

2452270 : 2557546

Xanthomonas_phage(28.57%)

transposase,protease,integrase

attL 2444086:2444114|attR 2478049:2478077

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2444086:2444114	attL	NA	NA	NA	NA
WP_009602002.1\|2452270_2455351_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.3e-51	25.3
WP_044474912.1\|2455496_2457197_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_080601544.1\|2458221_2459190_+	hypothetical protein	NA	NA	NA	NA
WP_129589028.1\|2459297_2461088_+	hypothetical protein	NA	NA	NA	NA
WP_019238197.1\|2462889_2464770_-	S8/S53 family peptidase	NA	NA	NA	NA
WP_019238198.1\|2465370_2468328_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_057672720.1\|2469498_2470554_+	DNA-binding protein	NA	NA	NA	NA
WP_100101046.1\|2471404_2474593_+	Avirulence protein AvrBs3	NA	NA	NA	NA
WP_095575434.1\|2475075_2475615_+	hypothetical protein	NA	NA	NA	NA
WP_075285681.1\|2475957_2476422_+	hypothetical protein	NA	NA	NA	NA
WP_075285680.1\|2476418_2477144_+	hypothetical protein	NA	NA	NA	NA
WP_005918301.1\|2477233_2477521_-	DUF3892 domain-containing protein	NA	NA	NA	NA
WP_011037183.1\|2478683_2479193_+	ferritin-like domain-containing protein	NA	NA	NA	NA
2478049:2478077	attR	NA	NA	NA	NA
WP_011269772.1\|2479575_2480628_+	chemotaxis protein CheB	NA	NA	NA	NA
WP_075285679.1\|2480766_2481687_+	M14 family metallocarboxypeptidase	NA	NA	NA	NA
WP_075287245.1\|2481755_2483561_-	EAL domain-containing protein	NA	NA	NA	NA
WP_087942069.1\|2483873_2485005_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_100097351.1\|2485442_2497328_+	hypothetical protein	NA	NA	NA	NA
WP_075285678.1\|2497411_2500243_-	S8 family serine peptidase	NA	NA	NA	NA
WP_011037189.1\|2501746_2502382_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_075285677.1\|2502299_2502935_+	alpha/beta hydrolase	A0A1L7N183	Ralstonia_phage	4.3e-07	31.6
WP_075285676.1\|2503151_2505116_-	beta-N-acetylglucosaminidase	NA	NA	NA	NA
WP_011269768.1\|2505828_2506602_-	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_075285675.1\|2506731_2508003_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_011037194.1\|2508665_2509082_+	membrane protein	NA	NA	NA	NA
WP_040941293.1\|2509078_2510389_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
WP_011037196.1\|2510604_2511642_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_075285674.1\|2512020_2512716_+	thermonuclease family protein	NA	NA	NA	NA
WP_075285673.1\|2512823_2514914_-	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	1.6e-66	27.8
WP_012438415.1\|2515116_2515992_-	NmrA family NAD(P)-binding protein	NA	NA	NA	NA
WP_011037200.1\|2516302_2516734_+	DUF2946 family protein	NA	NA	NA	NA
WP_043890333.1\|2517179_2517734_+	SCO family protein	NA	NA	NA	NA
WP_011037202.1\|2517734_2518403_+	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_075272165.1\|2518455_2519745_-	MFS transporter	NA	NA	NA	NA
WP_011037204.1\|2519906_2520323_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011037205.1\|2520568_2520901_-	hypothetical protein	NA	NA	NA	NA
WP_075286539.1\|2520819_2521995_-	hypothetical protein	NA	NA	NA	NA
WP_011037207.1\|2522172_2523315_-	SPFH domain-containing protein	NA	NA	NA	NA
WP_016945311.1\|2523513_2523789_-	hypothetical protein	NA	NA	NA	NA
WP_011037208.1\|2523920_2524346_-	DedA family protein	NA	NA	NA	NA
WP_012438425.1\|2524638_2526687_+	TonB-dependent receptor	NA	NA	NA	NA
WP_016945312.1\|2526939_2529048_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-11	27.9
WP_012438427.1\|2529401_2529710_+	hypothetical protein	NA	NA	NA	NA
WP_087942079.1\|2529778_2530577_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_075272316.1\|2530807_2532115_-	alginate export family protein	NA	NA	NA	NA
WP_050911475.1\|2532205_2533096_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_050911474.1\|2533393_2533702_-	XapX domain-containing protein	NA	NA	NA	NA
WP_043890335.1\|2535332_2537441_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.3e-11	51.2
WP_012438434.1\|2537965_2538334_-	response regulator	NA	NA	NA	NA
WP_029217096.1\|2538417_2539734_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_012438436.1\|2539806_2540091_+	hypothetical protein	NA	NA	NA	NA
WP_012438437.1\|2540137_2540839_-	response regulator transcription factor	NA	NA	NA	NA
WP_016944917.1\|2540826_2542530_-	ATPase	NA	NA	NA	NA
WP_012438442.1\|2544573_2545425_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_014507805.1\|2545561_2545870_-	hypothetical protein	NA	NA	NA	NA
WP_100097350.1\|2547210_2548251_+	inovirus-type Gp2 protein	A0A077JDC0	Xanthomonas_phage	2.0e-198	97.7
WP_100097324.1\|2548247_2548544_+	DNA-binding protein	A0A1W6DXU2	Xanthomonas_phage	6.4e-46	91.8
WP_157769269.1\|2548759_2548897_+	hypothetical protein	NA	NA	NA	NA
WP_157769270.1\|2548973_2550215_+	hypothetical protein	NA	NA	NA	NA
WP_100097327.1\|2550211_2550487_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_100097347.1\|2550483_2551563_+	Zonular occludens toxin	E5F074	Ralstonia_phage	7.3e-31	31.5
WP_100101048.1\|2551573_2551816_-	hypothetical protein	NA	NA	NA	NA
WP_100097345.1\|2551854_2552238_-	hypothetical protein	A0A077JDD0	Xanthomonas_phage	4.0e-48	73.2
WP_100101049.1\|2552296_2552695_-	hypothetical protein	A0A1D6ZIU9	Xanthomonas_phage	2.1e-23	48.9
WP_100101050.1\|2553127_2554234_+	replication protein	S0F3I3	Stenotrophomonas_phage	6.5e-152	70.7
WP_100101051.1\|2554230_2554524_+	single-stranded DNA-binding protein	B1NI78	Stenotrophomonas_phage	4.3e-26	63.5
WP_157769269.1\|2554739_2554877_+	hypothetical protein	NA	NA	NA	NA
WP_157769271.1\|2554953_2556198_+	hypothetical protein	NA	NA	NA	NA
WP_100097327.1\|2556194_2556470_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_100097340.1\|2556466_2557546_+	Zonular occludens toxin	Q6UAZ2	Ralstonia_phage	4.7e-30	31.6

DBSCAN-SWA_5

2568923 : 2601332

Leptospira_phage(50.0%)

transposase,integrase

attL 2569841:2569860|attR 2592115:2592134

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087942069.1\|2568923_2570056_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
2569841:2569860	attL	NA	NA	NA	NA
WP_074038299.1\|2570403_2570697_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046937630.1\|2570728_2571847_-	hypothetical protein	A0A2H4J138	uncultured_Caudovirales_phage	1.9e-66	42.0
WP_042840992.1\|2571849_2572476_-	hypothetical protein	A0A2H4J137	uncultured_Caudovirales_phage	1.6e-46	49.3
WP_042840993.1\|2572600_2573491_+	hypothetical protein	NA	NA	NA	NA
WP_011345695.1\|2573958_2576061_-	hypothetical protein	NA	NA	NA	NA
WP_100101052.1\|2576436_2576931_-	hypothetical protein	NA	NA	NA	NA
WP_100101148.1\|2576996_2577794_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_146011572.1\|2577824_2579408_-	hypothetical protein	NA	NA	NA	NA
WP_100101054.1\|2579422_2582386_-	AAA family ATPase	A0A1B1IUG5	uncultured_Mediterranean_phage	1.2e-06	38.8
WP_100101055.1\|2583437_2584259_-	hypothetical protein	NA	NA	NA	NA
WP_146011571.1\|2584258_2584420_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_100101056.1\|2584586_2585666_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_157769272.1\|2586215_2587355_+	AAA family ATPase	NA	NA	NA	NA
WP_100101057.1\|2587578_2590461_+	avirulence protein	NA	NA	NA	NA
WP_100101058.1\|2591224_2592327_-\|transposase	IS3-like element IS1404 family transposase	S5WIU1	Leptospira_phage	4.5e-44	41.9
2592115:2592134	attR	NA	NA	NA	NA
WP_100101059.1\|2592307_2592841_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|2592878_2594010_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_100097386.1\|2595111_2596149_+	hypothetical protein	NA	NA	NA	NA
WP_014125898.1\|2596136_2597204_-	cointegrate resolution protein T	NA	NA	NA	NA
WP_040942478.1\|2598371_2601332_+\|transposase	Tn3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2609870 : 2619932

Xanthomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100101062.1\|2609870_2610911_+	inovirus-type Gp2 protein	A0A077JDC0	Xanthomonas_phage	3.6e-200	97.4
WP_100097324.1\|2610907_2611204_+	DNA-binding protein	A0A1W6DXU2	Xanthomonas_phage	6.4e-46	91.8
WP_157769269.1\|2611419_2611557_+	hypothetical protein	NA	NA	NA	NA
WP_157769273.1\|2611633_2612878_+	hypothetical protein	NA	NA	NA	NA
WP_100097327.1\|2612874_2613150_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_100101064.1\|2613146_2614226_+	Zonular occludens toxin	Q6UAZ2	Ralstonia_phage	4.7e-30	31.6
WP_100101065.1\|2614266_2614605_-	hypothetical protein	Q38057	Xanthomonas_phage	1.7e-50	83.9
WP_100101066.1\|2614663_2615062_-	hypothetical protein	A0A1D6ZIU9	Xanthomonas_phage	6.4e-25	49.2
WP_157769274.1\|2615355_2615514_+	hypothetical protein	NA	NA	NA	NA
WP_100097343.1\|2615513_2616620_+	replication protein	S0F3I3	Stenotrophomonas_phage	3.1e-154	70.9
WP_100097342.1\|2616616_2616910_+	single-stranded DNA-binding protein	B1NI78	Stenotrophomonas_phage	1.5e-26	65.6
WP_157769269.1\|2617125_2617263_+	hypothetical protein	NA	NA	NA	NA
WP_157769275.1\|2617339_2618584_+	hypothetical protein	NA	NA	NA	NA
WP_100097327.1\|2618580_2618856_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_100097340.1\|2618852_2619932_+	Zonular occludens toxin	Q6UAZ2	Ralstonia_phage	4.7e-30	31.6

DBSCAN-SWA_7

4651301 : 4710633

Leptospira_phage(42.86%)

transposase,tRNA,integrase

attL 4663288:4663305|attR 4716497:4716514

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011035631.1\|4651301_4653206_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_011035630.1\|4653537_4654248_+	DUF2490 domain-containing protein	NA	NA	NA	NA
WP_012437135.1\|4654331_4655300_-	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	1.3e-26	28.8
WP_011035628.1\|4655589_4656447_-	serine protein kinase RIO	NA	NA	NA	NA
WP_011035627.1\|4656598_4657459_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_075286457.1\|4657474_4658311_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_057671185.1\|4658891_4659305_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_040940445.1\|4659332_4660115_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_075285223.1\|4660124_4661477_-	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_011035622.1\|4661710_4662274_-	protocatechuate 3,4-dioxygenase subunit alpha	NA	NA	NA	NA
WP_011035621.1\|4662278_4663016_-	protocatechuate 3,4-dioxygenase subunit beta	NA	NA	NA	NA
WP_075285222.1\|4663088_4664297_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
4663288:4663305	attL	NA	NA	NA	NA
WP_011035619.1\|4664293_4665082_-	CoA-transferase subunit beta	NA	NA	NA	NA
WP_050911195.1\|4665078_4665942_-	CoA transferase subunit A	NA	NA	NA	NA
WP_011035617.1\|4666195_4667272_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_075286456.1\|4667419_4668403_+	oxidoreductase	NA	NA	NA	NA
WP_075286455.1\|4668671_4669451_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_075285221.1\|4669799_4671326_+	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_011035613.1\|4671510_4672335_+	aquaporin family protein	NA	NA	NA	NA
WP_075285220.1\|4672402_4673902_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_075285219.1\|4673952_4674663_-	hypothetical protein	NA	NA	NA	NA
WP_057671178.1\|4674681_4675866_-	4-hydroxybenzoate 3-monooxygenase	NA	NA	NA	NA
WP_011035609.1\|4675959_4676856_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011035608.1\|4676883_4678395_-	benzaldehyde dehydrogenase	NA	NA	NA	NA
WP_075285218.1\|4678401_4679169_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_075286454.1\|4679192_4679672_-	hypothetical protein	NA	NA	NA	NA
WP_075285217.1\|4679734_4680211_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_075286453.1\|4680963_4682205_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_075285215.1\|4682353_4683664_-	MFS transporter	NA	NA	NA	NA
WP_157382675.1\|4684306_4684447_-	hypothetical protein	NA	NA	NA	NA
WP_012437117.1\|4684536_4685097_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_040942203.1\|4685178_4686075_+	DUF2167 domain-containing protein	NA	NA	NA	NA
WP_011269473.1\|4686215_4686407_+	hypothetical protein	NA	NA	NA	NA
WP_011035600.1\|4686479_4686746_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_012437115.1\|4687157_4688996_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_057671170.1\|4689264_4690248_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	4.0e-60	46.1
WP_139328404.1\|4690470_4690917_+	hypothetical protein	NA	NA	NA	NA
WP_075285214.1\|4691328_4691985_+	hypothetical protein	NA	NA	NA	NA
WP_146011532.1\|4692296_4692971_+	hypothetical protein	NA	NA	NA	NA
WP_075285213.1\|4693349_4694018_+	AbiV family abortive infection protein	NA	NA	NA	NA
WP_146011531.1\|4694677_4694920_-	hypothetical protein	NA	NA	NA	NA
WP_040941151.1\|4695273_4695693_+	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|4697216_4698349_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_129588813.1\|4698830_4699277_+	hypothetical protein	NA	NA	NA	NA
WP_075286451.1\|4699716_4699950_-	xanthomonadin biosynthesis protein	NA	NA	NA	NA
WP_075285212.1\|4700019_4700592_+	hypothetical protein	NA	NA	NA	NA
WP_012438063.1\|4700884_4701865_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	3.7e-98	60.7
WP_100101130.1\|4702395_4703046_+	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|4703093_4704225_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_100097275.1\|4704435_4705537_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.5e-44	41.9
WP_075286667.1\|4707961_4708993_+	hypothetical protein	NA	NA	NA	NA
WP_012438063.1\|4709652_4710633_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	3.7e-98	60.7
4716497:4716514	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017310

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection