CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024843	Streptococcus iniae strain FP5228 chromosome, complete genome	2 crisprs	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,DinG,csa3	0	6	10	0
NZ_CP024844	Streptococcus iniae strain FP5228 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024843_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024843_1

1409684-1410511

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRT

12 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP024843_1

>merge|NZ_CP024843|1|1409684-1410511|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACAAGCGGAACAGATGACAATATATGATTTTTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACGTGGCATTTTTGGAAATAGTTAGACAATTAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACAGGTGTCAAACTTATCACAGCTCTTGTTCAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACACAATTATTTTATGTCAGATATTGATGAATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACGTGTTCGCCGAATAAGTAGAATTAAGAAGCGTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAACCCTGCAAAAGATTCATATGCGATTAGTTATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCAAGTCTTGCAACAACAAGTATCCACTACAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACATATATATCAATGGAAATACCAAAACGTTTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAATTCCTTGGTTGTCAGTGTAATAGATAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCGGTTTAGCTGCTCTTGAGAAGATTGTATTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAGTATTAAATATAATATCAACACCTTTAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTACAACAGTACCTATAAGTGTGGCTACACCGTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>NZ_CP024843|1|1|1409684-1410445|PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGGCATTTTTGGAAATAGTTAGACAATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AGGTGTCAAACTTATCACAGCTCTTGTTCA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC

>NZ_CP024843|1|1|1409684-1410511|CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGGCATTTTTGGAAATAGTTAGACAATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AGGTGTCAAACTTATCACAGCTCTTGTTCA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>NZ_CP024843|1|1|1409684-1410511|CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGGCATTTTTGGAAATAGTTAGACAATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AGGTGTCAAACTTATCACAGCTCTTGTTCA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024843.1\|WP_003099262.1\|1401722_1402490_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP024843.1\|WP_003099260.1\|1400978_1401713_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_CP024843.1\|WP_016355899.1\|1397706_1399059_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP024843.1\|WP_037583479.1\|1411709_1413542_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP024843.1\|WP_031239425.1\|1415424_1416603_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_CP024843.1\|WP_003099264.1\|1402486_1403128_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_CP024843.1\|WP_003099273.1\|1408915_1409578_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP024843.1\|WP_003099269.1\|1403612_1407719_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP024843.1\|WP_031239418.1\|1411078_1411522_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024843.1\|WP_003099294.1\|1417639_1418659_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP024843.1\|WP_003099271.1\|1407718_1408585_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP024843.1\|WP_003099297.1\|1418842_1419460_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024843.1\|WP_031239422.1\|1413652_1414096_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP024843.1\|WP_003099259.1\|1399830_1400961_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP024843.1\|WP_003099283.1\|1414098_1414755_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP024843.1\|WP_017794788.1\|1408581_1408926_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP024843.1\|WP_003099287.1\|1414774_1415239_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP024843.1\|WP_003099276.1\|1410607_1411030_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP024843.1\|WP_003099292.1\|1416685_1417531_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381297
NZ_CP024843.1\|WP_003099258.1\|1399131_1399788_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP024843.1\|WP_003099262.1\|1401722_1402490_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.46549e-126
NZ_CP024843.1\|WP_003099260.1\|1400978_1401713_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	4.71812e-76
NZ_CP024843.1\|WP_016355899.1\|1397706_1399059_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP024843.1\|WP_037583479.1\|1411709_1413542_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP024843.1\|WP_031239425.1\|1415424_1416603_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	5.87042e-79
NZ_CP024843.1\|WP_003099264.1\|1402486_1403128_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	5.18321e-54
NZ_CP024843.1\|WP_003099273.1\|1408915_1409578_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	9.43095e-113
NZ_CP024843.1\|WP_003099269.1\|1403612_1407719_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP024843.1\|WP_003099294.1\|1417639_1418659_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.79923e-94
NZ_CP024843.1\|WP_003099271.1\|1407718_1408585_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.9174e-124
NZ_CP024843.1\|WP_031239422.1\|1413652_1414096_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.68939e-84
NZ_CP024843.1\|WP_003099259.1\|1399830_1400961_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP024843.1\|WP_003099283.1\|1414098_1414755_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	1.07784e-28
NZ_CP024843.1\|WP_017794788.1\|1408581_1408926_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.34293e-48
NZ_CP024843.1\|WP_003099287.1\|1414774_1415239_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.56994e-17
NZ_CP024843.1\|WP_003099276.1\|1410607_1411030_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.77313e-69
NZ_CP024843.1\|WP_003099292.1\|1416685_1417531_+\|aldo/keto-reductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	1.60721e-102
NZ_CP024843.1\|WP_003099258.1\|1399131_1399788_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.21858e-10

>NZ_CP024843.1|WP_003099273.1|1408915_1409578_+|type-II-A-CRISPR-associated-protein-Csn2
MKLNFPVFDEPITIEKGTILVIENRTVFSSCAKHFCQYSEEDDLKLFDEKFKSIKESEVMLVTDILGYDVNAPSLLKLVHSDLETQLSDKPEVKSMIEKLAATITELIAYECLENELDLEYDEITVLELIKALGVKIETQSDTFFEKCLEIVQIFKYLTKKKLLVFINSGAYFTRDEFEKLLEYISLSSQPVLFLEPRKMYDFPQYVLDEDLFMLTENMV
>NZ_CP024843.1|WP_017794788.1|1408581_1408926_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTSEERKAYRKFRTFLLSEGFIMHQFSVYSKLLLNNSANTAMIDRLQENNPKSGNITLLTVTEKQFARMIYLNGNRDTCIANSDDRIVFLGEEYKDET
>NZ_CP024843.1|WP_003099271.1|1407718_1408585_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVIVNTHSKLSYKSNHLIYKDASRTEMIHLSEIDILLLETTDIVLSTMLIKRLIDENILVIFCDDKRLPTALLAPYYGRHDSSLQLSKQISWPEDLRAEVWTKIIAQKILNQSMYLGSCGFYEKSQSIIDLYNGLEIFDPTNREGHSARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFARELVVCGCMTQFGLKHSNQFNHFNFASDIMEPFRIIVDKIVYENRNKSFIQIKRYLFSIFSETYLYNNKEMYLSNIVSDYTKKVVKSLNNEGKGVPEFRV
>NZ_CP024843.1|WP_003099269.1|1403612_1407719_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MRKPYSIGLDIGTNSVGWAVITDDYKVPSKKMRIQGTTDRTSIKKNLIGALLFDNGETAEATRLKRTTRRRYTRRKYRIKELQKIFSSEMNELDIAFFPRLSESFLVSDDKEFENHPIFGNLKDEITYHNDYPTIYHLRQTLADSDQKADLRLIYLALAHIIKFRGHFLIEGNLDSENTDVHVLFLNLVNIYNNLFEEDIVETASIDAEKILTSKTSKSRRLENLIAEIPNQKRNMLFGNLVSLALGLTPNFKTNFELLEDAKLQISKDSYEEDLDNLLAQIGDQYADLFIAAKKLSDAILLSDIITVKGASTKAPLSASMVQRYEEHQQDLALLKNLVKKQIPEKYKEIFDNKEKNGYAGYIDGKTSQEEFYKYIKPILLKLDGTEKLISKLEREDFLRKQRTFDNGSIPHQIHLNELKAIIRRQEKFYPFLKENQKKIEKLFTFKIPYYVGPLANGQSSFAWLKRQSNESITPWNFEEVVDQEASARAFIERMTNFDTYLPEEKVLPKHSPLYEMFMVYNELTKVKYQTEGMKRPVFLSSEDKEEIVNLLFKKERKVTVKQLKEEYFSKMKCFHTVTILGVEDRFNASLGTYHDLLKIFKDKAFLDDEANQDILEEIVWTLTLFEDQAMIERRLVKYADVFEKSVLKKLKKRHYTGWGRLSQKLINGIKDKQTGKTILGFLKDDGVANRNFMQLINDSSLDFAKIIKNEQEKTIKNESLEETIANLAGSPAIKKGILQSIKIVDEIVKIMGQNPDNIVIEMARENQSTMQGIKNSRQRLRKLEEVHKNTGSKILKEYNVSNTQLQSDRLYLYLLQDGKDMYTGKELDYDNLSQYDIDHIIPQSFIKDNSIDNTVLTTQASNRGKSDNVPNIETVNKMKSFWYKQLKSGAISQRKFDHLTKAERGALSDFDKAGFIKRQLVETRQITKHVAQILDSRFNSNLTEDSKSNRNVKIITLKSKMVSDFRKDFGFYKLREVNDYHHAQDAYLNAVVGTALLKKYPKLEAEFVYGDYKHYDLAKLMIQPDSSLGKATTRMFFYSNLMNFFKKEIKLADDTIFTRPQIEVNTETGEIVWDKVKDMQTIRKVMSYPQVNIVMKTEVQTGGFSKESIWPKGDSDKLIARKKSWDPKKYGGFDSPIIAYSVLVVAKIAKGKTQKLKTIKELVGIKIMEQDEFEKDPIAFLEKKGYQDIQTSSIIKLPKYSLFELENGRKRLLASAKELQKGNELALPNKYVKFLYLASHYTKFTGKEEDREKKRSYVESHLYYFDEIMQIIVEYSNRYILADSNLIKIQNLYKEKDNFSIEEQAINMLNLFTFTDLGAPSAFKFFNGDIDRKRYSSTNEIINSTLIYQSPTGLYETRIDLSKLGGK
>NZ_CP024843.1|WP_003099264.1|1402486_1403128_+|TIGR01906-family-membrane-protein
MREKCRVIGLWLWLLSFAVLATIYLAWLSYPLEIDFLGIDKVVYMTKASILCHFNGLMSYLTNPFHQTLTFASFLSSKDGLAHFQDVKILFHVTQAIFVLLAFPSLKFLKTTIQKQLMPLYQNAFLSAAVCPVLIASFAFMIGFEQFFILFHKILFAGKSNWTFNPLTDPVIWILPESFFRHCFIAFFILYELAFWTLYSISKKQENNKKQTT
>NZ_CP024843.1|WP_003099262.1|1401722_1402490_+|TIGR01457-family-HAD-type-hydrolase
MKYKGYLIDLDGTIYMGKDPIPAGKAFIESLQAKELPYLLVTNNTTRTPEMIQEMLLKQFNIETPLKSIYTATMATVDYMNDMNRGKTAYVIGETGLKSAISAAGYQEDKETPAYVVVGLDTQLTYDMLATATLAIEKGALFIGTNPDLNIPTERGLLPGAGTLVALLEAATRVKPVFIGKPNAIIMNKALEILDIKRQDALMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVATLPIQPDYVLKSLDEWDFK
>NZ_CP024843.1|WP_003099260.1|1400978_1401713_+|acyl-ACP-thioesterase
MGLKYREQLRLSFDLCDVKCDVKLPLLLAYCMIISGKQSQQLGRSDAYVLDTYRFVWIITDHEFSFERIPKLHETITIETEALSYNKYFCYRQFTFFDQEGEKIGCLVTHFALMDFDTRKVAPIPEELVAIYQSEFSKKLRRTPRMQALQEAVEKDYNVRYYDIDLNGHVNNSKYLEWMYDVMGFAFLQSHRPKHIQVKYLKEVAPGGTVSSRYHLEDLKSYHEITSENAMNAQAIITWETITE
>NZ_CP024843.1|WP_003099259.1|1399830_1400961_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPSSAYIHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIAEFRYYDVKKLRTLYIGGGTPTSITASQLDYLLTELSRELDLQMLEEFTIEANPGDLSPDKIEVLKASAVNRISLGVQTFNDKHLKQIGRSHNEAQIYSTISALKEAGFHNISIDLIYALPGQTLEQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIIREMEANGFEHYEISNFSKPGFYSQHNLMYWNNDEYYGCGAGASGYLNGVRYRNRVPIQHYLKAVADGDARLSEEILSQKEMMEEEMFLGLRKKTGVSVTAFEEKFKCSFQELYGAVVSQLQEEGLLVNDDKVIRMTKKGLFLGDNVAEKFILE
>NZ_CP024843.1|WP_003099258.1|1399131_1399788_+|GNAT-family-N-acetyltransferase
MNQNQQDFEQGLDSPCHKLFTEMIPEFQEGYLSYVFQTEKKDIQKRRIKNINKSFHRLITEPSFYLMPLSQESAEEIANKWHYQPPYDFYDMTADIEDYKEILSADKRGDHYFQVLRNGVLFGFVGFFKRHDQLEIVLGMKPDYVGKGYGRAFFQAIEDYAKLQFAAKCHVLKVADFNKRAKHLYCQMGYKGVTVYNQKTNGSAYPFVRMEKWFSEKE
>NZ_CP024843.1|WP_016355899.1|1397706_1399059_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPRVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDADTDNLPRPSAEGLGTLVDYPEGLRKYEKFLVSTGLALDGMKVALDTANGAASVSARDIFLDLEAEITVIGEEPNGLNINDGIGSTHPEKLQELVIESGSDIGLAFDGDSDRLIAVDENGQIVDGDKIMFIIGKYLSEKGMLAKNTIVTTVMSNLGFHKALDEHGINKAITAVGDRYVVEEMRQSEFNLGGEQSGHVIIMDYNTTGDGQLTAIQLTKVMKETGRSLSDLASDVTIYPQKLVNIRVENSMKEKAMEVPEIAAIIGKMEEEMQGNGRILVRPSGTEPLLRVMAEAPTDEAVDYYVDTIADVVRSEIGID
>NZ_CP024843.1|WP_003099276.1|1410607_1411030_+|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLIGQVLERIERRGFVIEKLELRQADAAILRKHYDFLVDKPFFPEIEAYMTSGPLLIGVLSGNRVVSSWRMMMGVTNPKDALPGTIRGDFGQAPGDDGGIQNVVHGSDSIDAARREIDIWFASQE
>NZ_CP024843.1|WP_031239418.1|1411078_1411522_-|hypothetical-protein
MKKLNLTGERFGRLTVAKRTDKRAGNNEIVYICKCDCGKVIEAYTSLLRQGRTRSCGCLHRDTRMKDLSSLTAKKKIVDGVQLDMFEGRQNKNNTSGYKGVYKHYKGYVARICVKGVHHRGVTRKTKEEAYQDRLALERKFLPRLDS
>NZ_CP024843.1|WP_037583479.1|1411709_1413542_+|elongation-factor-4
MNSQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKDGETYILHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVEKPLQALIFDSAYDAYRGVILQVRIINGIVKPGDKIQMMSNGKTFDVTEVGIFTPKTVGREFLATGDVGYIAASIKTVADTRVGDTVTLANNPAQEPLHGSKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVMTTDGQMLEVSNPSEFPDPTKVDHIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNAEKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDSKK
>NZ_CP024843.1|WP_031239422.1|1413652_1414096_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MIDKEKLRQTIGDLAYKVTQEAATEPAFTGEYDHFFEKGIYVDVVDGQVLFSSDDKYQSGCGWPAFTKPIDNRQVTNHQDNSYGMRRVEIKSRQAQSHLGHVFNDGPKEEGGLRYCINSAALRFIPYEQMAKEGYGEWLSLFDGKKE
>NZ_CP024843.1|WP_003099283.1|1414098_1414755_+|HD-domain-containing-protein
MLSPKEKDILAAAEKWVSQKLADDASGHDWWHIVRVRNTAVTIAQKENANLFICQLAALLHDMTDEKLHQDRVKAEKDLKNWLEQQSLAASQKQQIRDIIESISFKAGHGKPAESIEAKVVQDADRLDAIGAIGIARCMAYSGHKGRLIHDPNRKARQNLSVDDYRNGKDTAIMHFYEKLLQLKDLMNTEYGYFLAQQRHAFLESYLEEFYAEWDGLR
>NZ_CP024843.1|WP_003099287.1|1414774_1415239_+|GNAT-family-N-acetyltransferase
MIRLATRHDIPELLLLLEEIRRHHQTVRPDLFRADGGKFDAKELELLLYNPNKPIYVYTDDHDKVLGHLFLQFKVSESPVRIPRKVLYVEDLCVNAHYRGQGIGRQLMAFAKDFAREKGCYQVTLNVWNANKEAYAFYERLGFVPQQTQMERNL
>NZ_CP024843.1|WP_031239425.1|1415424_1416603_+|DUF2974-domain-containing-protein
MATLIDYIKANSHRDFHSLPLNELDIAAINEIGYLSFDDLVEESVDASGVFDLSKMLVNDKDDTKASVYNFLITKERVALFCAIRDSKRFNDLSLSHYVNEVDPEFEKQFAAMVFTIPEINHTQMIFRGTDDSLIGWKEDFKLTYMKEVAANRSALSYLNAYLMNHPNKELVLSGHSKGGHLALYAAAFLASDLQEQLTVIYLLDSPGLAEEFLQREGYRAIRKRLRVIRPQESVVGVMLYCDVKPRIVKSASFGLLQHKTCNWQVSLDGQFEQATQASHLSKTLELVFKDWTKQLSKRDLKLVCDSLFDALISSGITSLNAFTLNDKAFVTFFQIIGSLHSLDQSKKSIIMKSVQQLIIDYTGYRKREVTEKIQLTLSKYLKKTKAKSKGE
>NZ_CP024843.1|WP_003099292.1|1416685_1417531_+|aldo/keto-reductase
MIERLKLNNGLAIPALGLNTWLVENARAESLVSQALKLGYRHIDTAQAYGNEVGVGKGLFISGLPREEIYVASKMTAEHQNYELAVASIDDSLRKLGLDYLDLMLVHCSQVGSGNASTHKVANHLEVWRALEDAHSAGKIKSIGLSCFLMDDLKTIEKHARIKPAVNQILTHIGNTPLELISYCQQKAIVLEAYSPIVYEQALQSPEIKEMANHYHVTPAQLCIQYVLQLGMVALPKTENPQHMISNQQLDFKISKKDMAILKALDFKVDGNNSQEEVFYS
>NZ_CP024843.1|WP_003099294.1|1417639_1418659_+|YeiH-family-putative-sulfate-export-transporter
MKSINEKIPGILICLAIALPSWLLGHYLPLIGAPVFAILSGMLCAMFYQKREKSQAGISFTSKYILQFAVVLLGFGLNLKQIMSVGLESLPIILSTIATSLLVAYCLQKKLKLDINTATLVGVGSSICGGSAIAATAPVIDAKEDEIAKAISVIFLFNILAALLFPSLGQLLGLSNHGFAIFAGTAVNDTSSVTATAASWDALHHSNTLDGATIVKLTRTLAIIPITLFLSYYKAKHAKESTRGQEFSLKKAFPTFIIFFLLASLVTSLASVFGLPMAIFDSLKVLSKFFIVMAMAAIGLNSNLPKLIKTGGQAIFLGAICWLSITLVSLVMQLMMGTW
>NZ_CP024843.1|WP_003099297.1|1418842_1419460_+|hypothetical-protein
MRKFLQDLETEVSHYLELALSFILTVAMIFFAISLISDLAGFMSSRIDNNNLFELVLGRAMSLAVGVELIKMLSKPSPGTVIEVLLFAITRQLIVDHPNMTDFLLGIIAVAVLFAVRRYLFIQFDDASRMIIRASHKIKMVNIIAHVKIKAEKDDTLRSFMTRKLEEDEQTISVGSIVYLKNVALRVEKMHGESISRVEVIRGIY

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Crispr_ID: NZ_CP024843_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024843_2

1770835-1770976

Orphan

Consensus_repeat	Method
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024843_2

>merge|NZ_CP024843|2|1770835-1770976|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAAACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTGGGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

>NZ_CP024843|2|2|1770835-1770976|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	ACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTG
GGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024843.1\|WP_003099963.1\|1762670_1763897_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP024843.1\|WP_003099982.1\|1782096_1783020_+\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
NZ_CP024843.1\|WP_037583420.1\|1775052_1778700_-\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_CP024843.1\|WP_003099967.1\|1765208_1766375_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
NZ_CP024843.1\|WP_003099988.1\|1784803_1785184_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP024843.1\|WP_003099975.1\|1771039_1772149_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_CP024843.1\|WP_003099969.1\|1766374_1767181_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_CP024843.1\|WP_003099965.1\|1763923_1765189_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP024843.1\|WP_000048058.1\|1774742_1774919_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP024843.1\|WP_003099974.1\|1770325_1770664_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP024843.1\|WP_003099977.1\|1774097_1774475_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|376605
NZ_CP024843.1\|WP_016356047.1\|1772157_1773969_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP024843.1\|WP_003099970.1\|1767183_1768116_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
NZ_CP024843.1\|WP_003099986.1\|1783730_1784801_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP024843.1\|WP_003099959.1\|1760351_1761662_-\|DUF2142-domain-containing-protein	unknown	unknown	gnl\|CDD\|370749
NZ_CP024843.1\|WP_003099971.1\|1768105_1769260_-\|DUF1972-domain-containing-protein	unknown	unknown	gnl\|CDD\|340858
NZ_CP024843.1\|WP_003099984.1\|1783050_1783722_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP024843.1\|WP_003099960.1\|1761697_1762678_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP024843.1\|WP_003099972.1\|1769377_1770232_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
NZ_CP024843.1\|WP_003099981.1\|1778696_1781933_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291

Protein	Function_ID	Function_description	E-value
NZ_CP024843.1\|WP_003099963.1\|1762670_1763897_-\|hypothetical-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	7.57125e-10
NZ_CP024843.1\|WP_003099982.1\|1782096_1783020_+\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	4.49769e-145
NZ_CP024843.1\|WP_037583420.1\|1775052_1778700_-\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP024843.1\|WP_003099967.1\|1765208_1766375_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	8.97088e-114
NZ_CP024843.1\|WP_003099988.1\|1784803_1785184_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	0.000232849
NZ_CP024843.1\|WP_003099975.1\|1771039_1772149_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP024843.1\|WP_003099969.1\|1766374_1767181_-\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.62687e-49
NZ_CP024843.1\|WP_003099965.1\|1763923_1765189_-\|hypothetical-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.18249e-07
NZ_CP024843.1\|WP_000048058.1\|1774742_1774919_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	9.89287e-11
NZ_CP024843.1\|WP_003099974.1\|1770325_1770664_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.41323e-41
NZ_CP024843.1\|WP_003099977.1\|1774097_1774475_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	1.06476e-42
NZ_CP024843.1\|WP_016356047.1\|1772157_1773969_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP024843.1\|WP_003099970.1\|1767183_1768116_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.81505e-85
NZ_CP024843.1\|WP_003099986.1\|1783730_1784801_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	8.71601e-09
NZ_CP024843.1\|WP_003099959.1\|1760351_1761662_-\|DUF2142-domain-containing-protein	gnl\|CDD\|370749	pfam09913, DUF2142, Predicted membrane protein (DUF2142). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.00632e-42
NZ_CP024843.1\|WP_003099971.1\|1768105_1769260_-\|DUF1972-domain-containing-protein	gnl\|CDD\|340858	cd04955, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea.	0
NZ_CP024843.1\|WP_003099984.1\|1783050_1783722_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.96473e-94
NZ_CP024843.1\|WP_003099960.1\|1761697_1762678_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.20376e-17
NZ_CP024843.1\|WP_003099972.1\|1769377_1770232_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.41324e-132
NZ_CP024843.1\|WP_003099981.1\|1778696_1781933_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0

>NZ_CP024843.1|WP_003099974.1|1770325_1770664_-|metal-sulfur-cluster-assembly-factor
MTEQKKYSDQEVSKIKDRILEALEMVIDPELGIDIVNLGLIYEIRFEATGHTEIDMTLTTMGCPLADLLTDQIYDVLKEIPEVTSSEVKLVWYPAWTVEKMSRYARIALGIR
>NZ_CP024843.1|WP_003099972.1|1769377_1770232_-|dTDP-4-dehydrorhamnose-reductase
MILITGSNGQLGTELRYLLDERNEDYVAVDVAEMDITNSEKVDDVFAQVKPTLVYHCAAYTAVDAAEDEGKALNQAINVDGTENIAKACQKHQATLVYISTDYVFDGKKPLGQEWLETDIPNPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKSHDILTVVNDQHGRPTWTRTLAEFMCHLAENKKEFGYYHLSNDAKEDTTWYDFAKEILKDTTVDVKPVDSSAFAAKAKRPLNSTMNLDKAKATGFVIPTWQDALGEFYKQEVKK
>NZ_CP024843.1|WP_003099971.1|1768105_1769260_-|DUF1972-domain-containing-protein
MRDVFIIGSRGLPAQYGGFETFVEELINHQVSHDITYHVACLSDEKGKKDSNYKGARCFYIAPPKLGPARVIAYDMLAIKKALTYIVQHDIKNPIFYILGNTIGAFMSPFVKAIKKRNGLFFINPDGLEWKRSKWSKPVQTYLKFSEKKMCQLADLVISDNIGIEAYLNQNYKSAKTTFIAYGTETGKSQLAFEDESVRNYFYQNKLSEKDYYLVLGRFVPENNYETIIREFMLSKTSRDLVIITNHQGNPYFEKLRTITLCDKDPRIKFVGTVYDKELLIYIRENAFAYIHGHEVGGTNPGLLEALAHTNLNLVFGVDFNKSVAQTAALYWTKTANDLAQLIESVDQRSHYEDLGKEAKRIIEEEYTWKKIVGEYEALFLNEN
>NZ_CP024843.1|WP_003099970.1|1767183_1768116_-|glycosyltransferase-family-2-protein
MKINILMSTYNGEKFLAQQIESIQKQTVKDWNLLIRDDGSTDRTPQIIQEFAKTDSRIRFINPNNRQNFGVVKNFHTLVKFEEADFYFFSDQDDVWLEDKLALTLAESDRYELKKPLLIYTDLKIVNQKLEVTNDSMIKTQSHHANTSLVEELTENTVTGGTMMINHALAKEWTVTENLLMHDWYLALLASGLGNLVYLDHPTELYRQHDSNVLGARTWSKRMKNWIRPHKLIDKYWWLITSSQKQAKLLLDHDLSTKDYDMVQDYVTLLDKNLKQRIITLKKYGFKKNRAFHTLVFSSLIITKFGYRRQ
>NZ_CP024843.1|WP_003099969.1|1766374_1767181_-|ABC-transporter-permease
MNFLTVKNRILLREMVRTDFKLRYQGSFIGHLWSILKPMLLFTIMYLVFVRFLKFDDGTPHYAVSLLLGMVTWNFFTEATNMGMLSIVSRGDLLRKINFPKEIIVISSVVGASINYFINIIVVFAFALINGVKPSFGILILLPLFIELFLFAAGVAFILATLFVKYRDMGPIWEVMLQAGMYSTPIIYSITYIIQRGHLSIAKVMMMNPLAQIIQELRHFIVYSGATINWDIFDNKLFTLIPIIISVGSFIVGYTVFKRNAKKFAEIL
>NZ_CP024843.1|WP_003099967.1|1765208_1766375_-|ABC-transporter-ATP-binding-protein
MSEKKVVLSVDSVSKSFKLPTEASHSLRTSLVNYFKGIKGYTEQHVLDNVSFEVEEGDFFGIVGRNGSGKSTLLKIISKIYDPEKGKVTVDGKLVPFIELGVGFNPELTGRENVYMNGALLGFSREEVEAMYNDIVAFAELHEFMDQKLKNYSSGMQVRLAFSIAIKAKGDILILDEVLAVGDEAFQRKCFDYFAQLKRDNKTVILVTHSMEQVQRFCNKAMLIDKGHQVEVGTPLEISQIYKQLNGLDVAKESNKKTENNGISLSSQFFNRDNKTLDFNFEVHFEDIIEDPVLTFTIHKDTGELLYRWVSDEEIDGQLEVSNAKISIDFAIQNIYPNGKFTTEFGVKSRDRSKEYAMFSGICDFELINRGKSGNNIYWKPETKVNLH
>NZ_CP024843.1|WP_003099965.1|1763923_1765189_-|hypothetical-protein
MYKGKRFLLTHIWLRGFSGAEINILELATYLKKEGAKVEVFTFLASSPMIEEFQKRDISVIDDINYPFDINCYDVIFSAQNIIPSAIVNALGKKQEKCPKFIFIHMAALKEHVLEQPYIYGLEEKLSSATLAISEEIVQKNLKRFFKGIPNLQYYPNPVPEEYALQVHEQKTAPESILVISNHPPKEVMGIKTLLNAKGIKVDFFGVWSDHYQLVSPDLIAGYDCVIGIGKNVQYCLAMGKPIYVYDHFKGPGYLTAENIEQAAFNNFSGRGFEKCRKTSQEIVSDLLAGYQSAQSFQKKHIEEYRNRYTISNNMSRIFSSLESSDHPIDLLEKQDIEYINAINLLIQSKIVGLENDVANLWEGIHRLESIEKQMKSEREDLLQQLEAKNQELASINASRMFKFCQVLWKVKAFIFPNKTH
>NZ_CP024843.1|WP_003099963.1|1762670_1763897_-|hypothetical-protein
MITKIIRSYKDEGGRATLRKIRHRLQGGSHQQEAGKIDLNRIPIMPQLEDIAKADYINNPYQKPSKISKEKLNIAWVSPPVGKGGGGHTTISRFVKYLQSKGHHITFYIYHNNTIDQSPKEAQEIFSKAYGIDVKVDRLEEFKNQDLVFATSWETAYAVFNLQGENLHKFYFVQDFEPIFYGVGSRYKLAEATYKFGFYGVTAGKWLTHKLKDYQMDADFFDFGADTDIYKPKQVLKKKKKIAFYARAHTERRGFELGVMALKIFKDKHPEYDIEFFGQDMSNYDIPFDFIDRGILNKEELADIYHESVACLVLSLTNVSLLPLELLVAGCIPVMNSGDNNTMVLGDNDDIAYAEAYPVALAEELCKAVERANIDDYANEISQKYDTISWEASYQKVEEIIRREVIND
>NZ_CP024843.1|WP_003099960.1|1761697_1762678_-|glycosyltransferase-family-2-protein
MTDKLKATVFIPVYNGENDHLEETLTALYAQKTDFLWDLIITNSESKDNSVAIIEKFAEKYGNLKLIQLKKSDYSHGATRQMAAQESSAEYMVYLSQDAVPANDNWLSEMVKPFEFNDKIVAVLGKQKPRLSCFPAMKYDINAVFNEQGVADALTIWTRDDENLKGKYTKESFYSDVCSAAPRDFLVNQIGYRHVAYSEDYEYGKDILDAGFMKAYNSQAVVEHSNDILLSEYKSRIFDETYNVRLNSGVTTKISMVTVLRQAAKASVKDAMNIISDKDYSWKRKLYWLAINPLFHLEKWRGMRLANQVDLTSEQSKYSLEKRKEI
>NZ_CP024843.1|WP_003099959.1|1760351_1761662_-|DUF2142-domain-containing-protein
MKVEKMYLLLASLLISLSILIMPVTQVPDERVHAHFAWDIVYQEKPQKHTWLQGTGIENKQPADKAINFKGYQKFFTQKIDFSKEKTRLKFSIVNIRHIPQLIGMVIGKMIYPSAGVIITAGRITNAFIYILAIYYLIKYIKVGKYTLMFISLLPMMIHQAGSLSYDVLNFVAIASFFVCYINLMIDKKVTWKKLFGYLLLIILLYAVKPNNLLLFPLIGFINFRFEGPYINKLNPILEFWQRNRLKIVVLLTLLCLIVLTFVLSKRTSVLHFIHMIFNTLFVNNLNPDLNNVLTTGVFGFFGMLVIQMPAWVIWLNIFVLTIVFLQEAQSHLNDVTTKEVGISSFIMVLLQVVVIIITMYFAWTPKMLGENANISVGAQGRYFTPFLLYLFPLFMSLKNYFNFYLNKKLFVPLVLGTIVFNYVIYNILIMLYYWV
>NZ_CP024843.1|WP_003099975.1|1771039_1772149_-|RNA-polymerase-sigma-factor-RpoD
MAKENEITTFNVQVADFIRNHKKEGSAVDDEITEKLVIPFVLDADQIDDLLERLTDGGISITDKEGNPSAKYIVEEPKPEELTDEQLIGSNSAKVNDPVRMYLKEIGVVPLLSSDEEKELAVAVAEGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKQLRDFIED
>NZ_CP024843.1|WP_016356047.1|1772157_1773969_-|DNA-primase
MGLLWGGDDLAIDKEMISQIKNSVNIVDLIGEVVGLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVAEKSGIAIDLAPQRQYENPRASAHQELIRIHEDAQKFYHAVLMTTTQGQLAREYLYQRGLDDSLIDHFRIGLAPDESDYLYQTLSKKYSEESLLTSGLFNLSERNNLVYDAFRQRIMFPLTNERGDTIAFSGRIWTENDTEQKLAKYKNSRATVLFNKSYEFYHLDKAKPIITKKHEVYLMEGFMDVIAAYRAGAENAIASMGTALTPEHVKHLKKLTKKVILTYDGDNAGQNAIAKSLDLLTDLQVEIVRIPNQMDPDEFIQQNSAEALSDLLSHSRISSTEFLIEYLKPGNMDNLQSQIAYVEKIAKIIAASPSITAQNSYINRVADLLPDFDYLQVEQTVNSYRIQDRQNRQGQIPQVQTALVGLPVNKSVTALIKAENHLLHRLIHHDYLLNEFRNKEDFYFDTQELQSLYNLLKESGEISPYDLSQMNPQVSQAYYRVLEENLPDEVADSEINDILVKRNRLISERDILKQGKQVRESSNKGDHQLALEVLENLIAQKRNME
>NZ_CP024843.1|WP_003099977.1|1774097_1774475_+|large-conductance-mechanosensitive-channel-protein-MscL
MIKELKEFLFKGNVLDLAVAVVIGAAFKTIIDSLVADVITPLIGLLFGAPDFSSIKLFNAILIGNFINAVVNFLIVGTVLFFVVKAANKAMSFNKKEEIEEEVIAGPTQEELLVQIRDLLAKKEA
>NZ_CP024843.1|WP_000048058.1|1774742_1774919_-|30S-ribosomal-protein-S21
MSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSEAARKRKKF
>NZ_CP024843.1|WP_037583420.1|1775052_1778700_-|helicase-exonuclease-AddAB-subunit-AddA
MNFEPFLDAKAIIALQEAEMASDKVQKRTAEQIEAIYSHGQNILVSASAGSGKTFVMVERIIDKIMRGVAIDRMFISTFTVKAATELKERLEKKLIEAIKSQHNPDVKHYLSEQLHHLDQADIGTMDAFTQKLVSQYGYSLGILPKYRIMQEKSEQDILKTEVFDKLFESYMQKHQGIFIALVQNFSGKAKTANSFKQLVYQIHQFCQSTDNPKKWLAQNFLKGVHHYQGFADYPKEELELFLECMQKTAAALQDITDLEDYKQVTAKGSETKAYQKHKQMIASLYEFSTHFETMYGFAKISQLAQDLTALLPSGQSVTVAGQKYPVFKDLQNHLEGLRHLDIIFQYQGESLPLLELLQAFIADFSEAYLQAKMAENAFEFSDIAHFAISILEGNEAVRLAYQEHYHEVMVDEYQDNNHMQERLLELLSTGQNRFMVGDIKQSIYRFRQADPQIFNAKFKDYQENPQHGQLIILKENFRSQSEVLDVTNAIFTHLMDEAVGDILYDGNHQLLAGSDRQKEEHPENKCQFLIYNTDLADDSDESTTLEESESDGISPWQVKLLVKEIIKLHTEEGVPFSDITLLVSSRTRNDTIFQAFNHYGIPLVADGGQTNYLKSVEVMLMLDTLRTINNPLNDYALVALMRSLMFGFDEDQLARIALQGSNSGKIDSFYEKLCNCLKGEGEHPELISSDFKMELEQFHNTLDSWRHFAKSHSLYDLIWKIFNDRFYYDLVATSPKAEQAQANLYALALRSSQFEKTGFKGLSRFIRMIDKILETQNDLVDVEIDQPKNAVNLMTIHKSKGLEFKYVFILNCDKRFSMTDLHSPLILDREMGIGIKYIADVKEQVEAQHLNSLKVSLETLPYQLNKNRLKRATLSEQMRLLYVAMTRAKKKLYLIGKGSQQKAQDAFSGQRTGNHLSQELRESLTTFQDWILAISENFKEDLHFDLVYVSDKDLTANQIGRLSKESFLNQKDNQKDNRQTLEIARAIDMLDKVSELNQLYDAAIHLPTVRTPSQLKKYYEPLMDNDGVDVIDKQTYSQKTYKLPNFSKSKVVESSQIGSALHELMQRITVSDKVSMREIKDALALVSADDSVKEKIDLKKILAFFQETDLGQKIQAKRAFLHREAPFAMLKKDPKSQEKFVVRGIIDGYLLFDDRIVLFDYKTDRYSTSLDMVNRYSMQMELYAQALKQAYRINKIEKYLVLMGGQTIEVVAVD
>NZ_CP024843.1|WP_003099981.1|1778696_1781933_-|ATP-dependent-nuclease-subunit-B
MRLLYTDISQSLTEILVNQAASFAKSGYRVFYIAPNSLSFEKERAVLEHLEEEASFAITVTRFTQMARYFTINSKRSGKTLTDNALTMFFYRALLLIAPKDLSIYGPLKRDLTFIKQLVDLYKELKTSNISILDLHLDNEERKNDLIAIFAMVSDLIRQDQFEDQTPLAYFAQAICSRELEKELSKTVVVIDGFTRFTAEEDYLVSLLNDKCHQVVIGTYISQKAFQKSFVKGNVYQASIEFMGQLSKDYHCKAEFMSSSMVYPETFSKLSRLFEAKNDFSELDIVLEEDDKSAIAIWQNPNQKEEIEHVAKAIRQKLYEGYRYKDILVLLGDVEAYQLQIGPIFDKYDIPYYFGKSESMSHHPLVHFMESLERSKRYNWRREDIINLLKSGLFGHFENTSIDQFEYYLDYADINGFTKFSRPFSINPKGKQDLPIFHLESLNHLRKQLFDPLATLFKSQQQLGKSLMKKLVFFFETIDLTGNFQQLSEEESENDREKNDEVWKVFISILEEFQLIFAEEKLSLDDALSLLKVAMQAAEYRAVPATLDVVTVTSYDLVQAHSNAFVYALGLTQTHFPKHSKNSSLISDDERLMTNDRQDQFHRLEIASYENGKKNHYTALSLFNAATKELVLSQPSLINEMSDHSSPYLLDLIHFGVPLIEKGKNQFSNRETDIGHYKSLLSQLIDINRQALDQEFSPEDNNFWTVMLRYLKKRLKENKISFQEQKNHLQTKKLAPEVLARRFPEDKPLSLSSSALSVFYNNQYKYYLQYVLGLEEKGSIHPDARQHGTYLHKVFEVIMSDHSAASFDAKVQKAIEEVNQETSFKTFYQQDAQGEFSLRQLEAIVKSTARILDLSQSIKVLKQEDHFKIALGKELLINGTIDRIDQLPDASVGIVDYKSSAQAFEIDQFYNGLSPQLVTYLTALKDNNPDGKLFGAMYLHMQDPKFDLKKYKQLDEKVLTDFYSEMTYKGIFLETEKEYLSNGLYKTSKNLYSEQEIDLLIQFNKHLYYKALEQIKSGHFLINPYSKDGRSVQGDQLKAITGFESDLDLGQARLLVKGSSNEKRQEFLSLMEKEVRSK
>NZ_CP024843.1|WP_003099982.1|1782096_1783020_+|neutral-zinc-metallopeptidase
MKTDDLRESQNVEDRRGQASSSYNGSSGSSGGGMLLQLLFSRGGWKTKLIIVIIMLVMGGGGLSGVLTGEQSSPSNNSYQSTKINRTKGDKASQEQVTFVSKVFASTEDYWTKTFQEQGLTYKKPTLVLYTGTTQTACGQGQAAAGPFYCSADKKVYLDISFYDELTHKYGASGDFAMAYVIAHEVGHHIQNEIGTMSKYAQARQGKSQTQANQLNVQLELQADYYAGAWAKYVQGQNLLEKGDIDEAMTAAHAVGDDKLQKEAYGRVVPDSFTHGSSEQRQRWFNKGFEYGDFDHGNTFSIPYSDL
>NZ_CP024843.1|WP_003099984.1|1783050_1783722_-|ABC-transporter-ATP-binding-protein
MERILQFIGVSKTFQDGNQKIQALKATDFTIEAGQFVAVIGPSGSGKSTFLTLAGGLQTPTKGQIIINGSDYTQLPEKERAKRRFEDIGFILQTSNLIPFLTAEQQLELVDRLSQKRNHDQKQTLFKELEISHLAKKFPKDISGGERQRLAIARALYNNPALILADEPTASLDTKRAHEVVSLLLKECREKNKAIIMVTHDQRMIEECDYVYYMEDGVLRKHH
>NZ_CP024843.1|WP_003099986.1|1783730_1784801_-|ABC-transporter-permease
MFLALNEMKEAKLKYSLITGLLLLIAYLMFFLSGLANGLVQENKSAIDYWKADLVFLAKDANATLNLSQIPKDKKKQIDAAKITSLQQFNTVAWTKVKPNEEDKQKVSLFGIEANSFLLPPLLKGRTLKGQNEALIDKSLADKSGFELGDHIQFLNQDKTVKIVGITNKATFNVSPVIYMSQETFKPFMRPSKTGDMLVNAFIVQGKVDNYPKSDFQKLSLESFITKLPGYNAQVLTFAFMIGFLILISAIIISIFMYVLTIQKAPIFGIMKAQGISNKVIANALLTQTFLLSIIGSSAGWLLTGLTALLLPKAVPFQGNLGLDSLIFTSLILCALLGTLFSVLATVRIDPLKAIG
>NZ_CP024843.1|WP_003099988.1|1784803_1785184_-|OsmC-family-protein
MYHHHIYGDRLFHTRSNGYGTSVELFGSTENGETPMSLMNIALASCVTMCVQSFWKHTFGDNQARIETSIDYEEGGFYLNVTLPALLTQHLENALRDFVAQKCRVKQLLAKDVTVVIDFHYHSKGA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_024214	Lactococcus phage P162, complete genome	53210-53239	1	0.967
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_024215	Lactococcus phage P078, complete genome	52079-52108	2	0.933
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_024208	Lactococcus phage P118, complete genome	51800-51829	2	0.933
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_024203	Lactococcus phage P092, complete genome	51140-51169	2	0.933
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448723	Streptococcus phage Javan271, complete genome	12457-12486	3	0.9
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK449000	Streptococcus phage Javan64, complete genome	13581-13610	3	0.9
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448990	Streptococcus phage Javan584, complete genome	6936-6965	4	0.867
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448896	Streptococcus phage Javan278, complete genome	9500-9529	4	0.867
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448806	Streptococcus phage Javan565, complete genome	8490-8519	5	0.833
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448818	Streptococcus phage Javan597, complete genome	10092-10121	5	0.833
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	89439-89468	5	0.833
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MK448665	Streptococcus phage Javan1, complete genome	13693-13722	6	0.8
NZ_CP024843_1	1.2\|1409786\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409786-1409815	30	NZ_CP018188	Streptococcus salivarius strain ICDC2 plasmid, complete sequence	10013-10042	6	0.8
NZ_CP024843_1	1.2\|1409786\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409786-1409815	30	NC_030925	Bacillus phage Shbh1, complete genome	18048-18077	6	0.8
NZ_CP024843_1	1.7\|1410116\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410116-1410145	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	887525-887554	6	0.8
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	NZ_LR134432	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23	2056-2085	6	0.8
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	92331-92360	6	0.8
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81923-81952	6	0.8
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	33576-33605	6	0.8
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	AP014355	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, * SEQUENCING IN PROGRESS *	2647-2676	6	0.8
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	13713-13742	7	0.767
NZ_CP024843_1	1.2\|1409786\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409786-1409815	30	NZ_CP051644	Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence	7108-7137	7	0.767
NZ_CP024843_1	1.2\|1409786\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409786-1409815	30	NZ_CP051644	Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence	26885-26914	7	0.767
NZ_CP024843_1	1.2\|1409786\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409786-1409815	30	KX961631	Bacillus phage QCM11, complete genome	9614-9643	7	0.767
NZ_CP024843_1	1.4\|1409918\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409918-1409947	30	AP014441	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C93, * SEQUENCING IN PROGRESS *, 11 ordered pieces	6536-6565	7	0.767
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	AP011616	Thermus phage phiYS40 DNA, complete genome	61410-61439	7	0.767
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	DQ997624	Thermus thermophilus phage YS40, complete genome	61411-61440	7	0.767
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	NC_015937	Thermus phage TMA, complete genome	61209-61238	7	0.767
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	NC_008584	Thermus phage phiYS40, complete genome	61411-61440	7	0.767
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	AP011617	Thermus phage TMA DNA, complete genome	61209-61238	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP045792	Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence	21070-21099	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP023547	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence	3254-3283	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP040242	Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence	7980-8009	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_022656	Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence	25353-25382	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	CP013736	Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence	23646-23675	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP017867	Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence	14281-14310	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP017880	Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence	19495-19524	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP017874	Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence	21449-21478	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_MH634990	Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence	9178-9207	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	18573-18602	7	0.767
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	MT774393	CrAssphage cr127_1, complete genome	59253-59282	7	0.767
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MN882552	Butyrivibrio virus Bo-Finn, complete genome	28207-28236	8	0.733
NZ_CP024843_1	1.1\|1409720\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409720-1409749	30	MN693509	Marine virus AFVG_25M367, complete genome	53357-53386	8	0.733
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	64886-64915	8	0.733
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	MN693959	Marine virus AFVG_250M1110, complete genome	36135-36164	8	0.733
NZ_CP024843_1	1.4\|1409918\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1409918-1409947	30	NZ_AP017919	Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ5 DNA, complete sequence, phylotype ProJPt-1	1933-1962	9	0.7
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	110744-110773	9	0.7
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	MT708547	Klebsiella phage Muenster, complete genome	232419-232448	9	0.7
NZ_CP024843_1	1.8\|1410182\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410182-1410211	30	AB897757	Klebsiella phage K64-1 DNA, complete genome	110689-110718	9	0.7
NZ_CP024843_1	1.11\|1410380\|30\|NZ_CP024843\|PILER-CR,CRISPRCasFinder,CRT	1410380-1410409	30	NC_010183	Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence	32766-32795	9	0.7

1. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_024214 (Lactococcus phage P162, complete genome) position: , mismatch: 1, identity: 0.967

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattaaatataacatcaacaccttta	Protospacer
****************.*************

2. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_024215 (Lactococcus phage P078, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

3. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_024208 (Lactococcus phage P118, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

4. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_024203 (Lactococcus phage P092, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

5. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 3, identity: 0.9

aagcggaacagatgacaatatatgattttt	CRISPR spacer
atgcgaagcagatgacaatatatgattttt	Protospacer
* ***.*.**********************

6. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK449000 (Streptococcus phage Javan64, complete genome) position: , mismatch: 3, identity: 0.9

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agggggaacagatgacaatatttgattttt	Protospacer
*.* ***************** ********

7. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448990 (Streptococcus phage Javan584, complete genome) position: , mismatch: 4, identity: 0.867

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aggtggagcagatgacgatatatgattttt	Protospacer
*.*.***.********.*************

8. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448896 (Streptococcus phage Javan278, complete genome) position: , mismatch: 4, identity: 0.867

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agggggaacaaatgacaatatttgattttt	Protospacer
*.* ******.********** ********

9. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 5, identity: 0.833

aagcggaacagatgacaatatatgattttt	CRISPR spacer
gggtggagcagatgacgatatatgattttt	Protospacer
..*.***.********.*************

10. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448818 (Streptococcus phage Javan597, complete genome) position: , mismatch: 5, identity: 0.833

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agatggagcagatgacgatatatgattttt	Protospacer
*...***.********.*************

11. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.833

atatatatcaatggaaataccaa-aacgttt	CRISPR spacer
atatatatctatcgaaataccaataacatc-	Protospacer
********* ** ********** ***.*.

12. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MK448665 (Streptococcus phage Javan1, complete genome) position: , mismatch: 6, identity: 0.8

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agatagagcagatgacaatctatgattttt	Protospacer
*....**.*********** **********

13. spacer 1.2|1409786|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

gtggcatttttggaaatagttagacaatta	CRISPR spacer
atggcatttttggaaataattagagaaaag	Protospacer
.*****************.***** **  .

14. spacer 1.2|1409786|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 6, identity: 0.8

gtggca-tttttggaaatagttagacaatta	CRISPR spacer
-tgatagtttttggatatagttagacatttt	Protospacer
 **..* ******** *********** **

15. spacer 1.7|1410116|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 6, identity: 0.8

caagtcttgcaacaacaagtatccactaca----	CRISPR spacer
caagacttgcaacaacaagt----actagattat	Protospacer
**** ***************    **** *

16. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134432 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23) position: , mismatch: 6, identity: 0.8

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
atcaatttccatggaaataccaaaacgggt	Protospacer
**  ** ** *****************  *

17. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

18. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

19. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta	CRISPR spacer
tttaatttaaatataatatcaccaacttta	Protospacer
** .  *************** ** *****

20. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to AP014355 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

----ttagtattaaatataatatcaacaccttta	CRISPR spacer
aattttggt----aagataatatcaacaccttta	Protospacer
    **.**    ** ******************

21. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.767

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aagcggaacagatgaaactatatcagatcg	Protospacer
*************** * ***** *  *.

22. spacer 1.2|1409786|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051644 (Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence) position: , mismatch: 7, identity: 0.767

gtggcatttttggaaatagttagacaatta	CRISPR spacer
tactcattttcggaaataattagacaataa	Protospacer
    ******.*******.********* *

23. spacer 1.2|1409786|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051644 (Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence) position: , mismatch: 7, identity: 0.767

gtggcatttttggaaatagttagacaatta	CRISPR spacer
tactcattttcggaaataattagacaataa	Protospacer
    ******.*******.********* *

24. spacer 1.2|1409786|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to KX961631 (Bacillus phage QCM11, complete genome) position: , mismatch: 7, identity: 0.767

gtggcatttttggaaatagttagacaatta	CRISPR spacer
tttgttcttttggaaatagttagccaacta	Protospacer
 * *. .**************** ***.**

25. spacer 1.4|1409918|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to AP014441 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C93, *** SEQUENCING IN PROGRESS ***, 11 ordered pieces) position: , mismatch: 7, identity: 0.767

acaattattttatgtcagatattgatgaat	CRISPR spacer
aatattaatttatgtcagttattgatagag	Protospacer
*  **** ********** *******..*

26. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

27. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

28. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacaact	Protospacer
  ***************.**.*****. .*

29. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

30. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacaact	Protospacer
  ***************.**.*****. .*

31. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045792 (Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

32. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023547 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

33. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040242 (Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

34. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_022656 (Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

35. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to CP013736 (Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

36. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017867 (Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

37. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017880 (Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

38. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017874 (Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

39. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH634990 (Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

40. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

41. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatc-aacaccttta	CRISPR spacer
atagtattaaatataatattaaatataatt-	Protospacer
 ******************. **.*.  **

42. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MN882552 (Butyrivibrio virus Bo-Finn, complete genome) position: , mismatch: 8, identity: 0.733

aagcggaacagatgacaatatatgattttt	CRISPR spacer
tagcggaacagatgacaaaataacaagcct	Protospacer
 ***************** ***  *  ..*

43. spacer 1.1|1409720|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MN693509 (Marine virus AFVG_25M367, complete genome) position: , mismatch: 8, identity: 0.733

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aaatatctgagatgacaataaatgattttt	Protospacer
**...    *********** *********

44. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagaattaaatataatatcaacaaccaac	Protospacer
  ** ******************* *.

45. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MN693959 (Marine virus AFVG_250M1110, complete genome) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gacatattatatataatatcaaaacctaaa	Protospacer
   .***** ************ ****  *

46. spacer 1.4|1409918|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017919 (Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ5 DNA, complete sequence, phylotype ProJPt-1) position: , mismatch: 9, identity: 0.7

acaattattttatgtcagatattgatgaat	CRISPR spacer
ttcggatttttatgtcagatagttatgaat	Protospacer
 . .   ************** * ******

47. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

48. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

49. spacer 1.8|1410182|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

50. spacer 1.11|1410380|30|NZ_CP024843|PILER-CR,CRISPRCasFinder,CRT matches to NC_010183 (Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence) position: , mismatch: 9, identity: 0.7

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gggaaattaaaaataatatcgacaccttag	Protospacer
  .. ****** ********.******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

549534 : 603004

Staphylococcus_phage(15.0%)

transposase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100505.1\|549534_551433_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_003100506.1\|551457_551916_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003100508.1\|552110_553232_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_003100509.1\|553438_554110_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA
WP_003100511.1\|554121_554994_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_003100512.1\|555004_555652_+	HAD hydrolase-like protein	NA	NA	NA	NA
WP_003100514.1\|555763_556381_-	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	4.8e-27	75.9
WP_003100515.1\|556514_557321_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_003100516.1\|557313_558156_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	6.3e-14	27.5
WP_031239148.1\|558131_558971_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.2e-19	30.8
WP_003100520.1\|558973_559516_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_003100521.1\|559515_560613_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003100523.1\|560662_561946_-	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	7.4e-22	29.7
WP_003100525.1\|561938_563192_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	2.9e-87	39.8
WP_003100527.1\|563431_563815_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	4.6e-20	63.2
WP_003100528.1\|563817_564912_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_003100529.1\|565082_565949_-	sugar transporter	NA	NA	NA	NA
WP_003100530.1\|566125_567607_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.4e-95	40.5
WP_003100531.1\|567860_568883_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003100532.1\|569281_570154_+	YitT family protein	NA	NA	NA	NA
WP_003100533.1\|570236_571856_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.0e-45	25.1
WP_003100534.1\|571909_574504_+	YfhO family protein	NA	NA	NA	NA
WP_003100536.1\|575290_575770_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_003100537.1\|575915_577118_+\|protease	serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	5.1e-17	29.7
WP_016356271.1\|577196_577970_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	4.9e-13	30.1
WP_003100539.1\|578204_579560_+	chromosomal replication initiator protein DnaA	A6XMI1	Bacillus_virus	3.9e-05	25.9
WP_003100540.1\|579715_580852_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.8e-24	25.1
WP_003100542.1\|580913_581111_+	DUF951 family protein	NA	NA	NA	NA
WP_003100545.1\|581339_582458_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003100548.1\|582525_583095_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003100550.1\|583097_586598_+	transcription-repair coupling factor	A0A068EU29	Bacillus_phage	1.2e-05	34.8
WP_003100552.1\|586560_588072_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_003100554.1\|588100_588373_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_003100556.1\|588359_588731_+	septum formation initiator family protein	NA	NA	NA	NA
WP_172952521.1\|588734_588848_+	recombinase	NA	NA	NA	NA
WP_003100558.1\|588867_590154_+	serine hydrolase	NA	NA	NA	NA
WP_071794715.1\|590150_591434_+\|tRNA	tRNA lysidine(34) synthetase TilS	R4TVK3	Phaeocystis_globosa_virus	3.7e-13	25.0
WP_003100560.1\|591438_591981_+	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	9.1e-06	25.5
WP_003100561.1\|592002_593970_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	H8ZJI5	Ostreococcus_tauri_virus	2.3e-107	48.6
WP_089180041.1\|596213_597319_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_003100568.1\|598338_599730_+	amino acid permease	NA	NA	NA	NA
WP_003100570.1\|599908_600202_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003100572.1\|600234_600510_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.6e-06	41.8
WP_003099060.1\|600634_601810_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_089180059.1\|601899_603004_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3

DBSCAN-SWA_2

642694 : 686490

Bacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100185171.1\|642694_643861_-\|transposase	IS30-like element ISSag9 family transposase	NA	NA	NA	NA
WP_003046044.1\|644174_644483_+	30S ribosomal protein S10	NA	NA	NA	NA
WP_003098633.1\|644730_645357_+	50S ribosomal protein L3	NA	NA	NA	NA
WP_003098635.1\|645380_646004_+	50S ribosomal protein L4	NA	NA	NA	NA
WP_003098637.1\|646003_646300_+	50S ribosomal protein L23	NA	NA	NA	NA
WP_003098639.1\|646317_647151_+	50S ribosomal protein L2	NA	NA	NA	NA
WP_000533765.1\|647238_647517_+	30S ribosomal protein S19	NA	NA	NA	NA
WP_000818141.1\|647532_647877_+	50S ribosomal protein L22	NA	NA	NA	NA
WP_003098640.1\|647889_648543_+	30S ribosomal protein S3	NA	NA	NA	NA
WP_003098643.1\|648546_648960_+	50S ribosomal protein L16	NA	NA	NA	NA
WP_003046054.1\|648969_649176_+	50S ribosomal protein L29	NA	NA	NA	NA
WP_003098645.1\|649203_649464_+	30S ribosomal protein S17	NA	NA	NA	NA
WP_000615920.1\|649488_649857_+	50S ribosomal protein L14	NA	NA	NA	NA
WP_100185172.1\|649942_650248_+	50S ribosomal protein L24	NA	NA	NA	NA
WP_003098649.1\|650274_650817_+	50S ribosomal protein L5	NA	NA	NA	NA
WP_002987746.1\|650832_651018_+	type Z 30S ribosomal protein S14	NA	NA	NA	NA
WP_003098651.1\|651171_651570_+	30S ribosomal protein S8	NA	NA	NA	NA
WP_003098652.1\|651769_652306_+	50S ribosomal protein L6	NA	NA	NA	NA
WP_003098654.1\|652401_652758_+	50S ribosomal protein L18	NA	NA	NA	NA
WP_003098656.1\|652776_653271_+	30S ribosomal protein S5	NA	NA	NA	NA
WP_003098659.1\|653285_653468_+	50S ribosomal protein L30	NA	NA	NA	NA
WP_003098660.1\|653594_654035_+	50S ribosomal protein L15	NA	NA	NA	NA
WP_003098662.1\|654051_655356_+	preprotein translocase subunit SecY	NA	NA	NA	NA
WP_003098663.1\|655495_656137_+	adenylate kinase	NA	NA	NA	NA
WP_001040189.1\|656254_656473_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000868345.1\|656498_656615_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_003098664.1\|656632_656998_+	30S ribosomal protein S13	NA	NA	NA	NA
WP_003098665.1\|657015_657399_+	30S ribosomal protein S11	NA	NA	NA	NA
WP_003098668.1\|657448_658387_+	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA
WP_002986602.1\|658401_658788_+	50S ribosomal protein L17	NA	NA	NA	NA
WP_000562208.1\|666119_666314_-	DUF3173 family protein	NA	NA	NA	NA
WP_003098677.1\|666382_667729_-	hypothetical protein	A0A190WHA5	Circovirus	7.0e-07	27.1
WP_003098679.1\|668078_668438_-	hypothetical protein	NA	NA	NA	NA
WP_003098684.1\|669047_669455_+	helix-turn-helix transcriptional regulator	A0A139ZPK3	Marinitoga_camini_virus	4.7e-07	42.6
WP_089180041.1\|669826_670931_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_100185173.1\|670948_672026_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_089180044.1\|672170_672497_-	hypothetical protein	NA	NA	NA	NA
WP_003098714.1\|673262_674216_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_080768721.1\|674351_676874_+	Cna B-type domain-containing protein	NA	NA	NA	NA
WP_037583616.1\|677892_678660_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_003098721.1\|678978_680001_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.8e-40	34.9
WP_003098723.1\|680339_680831_+	hypothetical protein	NA	NA	NA	NA
WP_016355755.1\|681045_681495_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_003098726.1\|681596_682010_+	DUF1722 domain-containing protein	NA	NA	NA	NA
WP_003098727.1\|682069_683089_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	2.1e-27	25.2
WP_003098729.1\|683888_684242_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_016355758.1\|684278_684677_+	hypothetical protein	NA	NA	NA	NA
WP_003098733.1\|684789_685320_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_089180045.1\|685379_686490_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4

DBSCAN-SWA_3

755154 : 814836

Staphylococcus_phage(16.67%)

transposase,tRNA,protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051009473.1\|755154_756279_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.0e-27	30.1
WP_089180041.1\|756382_757487_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_100185205.1\|758379_758913_+	hypothetical protein	NA	NA	NA	NA
WP_003098889.1\|758900_759293_+	hypothetical protein	NA	NA	NA	NA
WP_003098891.1\|759305_759605_+	hypothetical protein	NA	NA	NA	NA
WP_003098892.1\|759753_760806_-	galactose mutarotase	NA	NA	NA	NA
WP_003098894.1\|760975_761665_+	response regulator transcription factor	NA	NA	NA	NA
WP_003098897.1\|761661_763029_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_003098898.1\|763144_763753_+	hypothetical protein	NA	NA	NA	NA
WP_003098900.1\|763960_764452_+	YehR family protein	NA	NA	NA	NA
WP_003098902.1\|764581_764872_+	WXG100 family type VII secretion target	NA	NA	NA	NA
WP_003098903.1\|765069_765558_+\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_100185177.1\|765663_766980_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.4e-89	41.7
WP_003098906.1\|767121_767484_-	hypothetical protein	NA	NA	NA	NA
WP_003098917.1\|767597_768008_-	hypothetical protein	NA	NA	NA	NA
WP_003098920.1\|768295_768868_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003098924.1\|768991_770560_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_003098925.1\|770762_771914_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_003098927.1\|772215_774156_+	transcription antiterminator	NA	NA	NA	NA
WP_003098928.1\|774162_774621_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003098930.1\|774630_775965_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_003098933.1\|775967_776252_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003098935.1\|776253_777114_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_003098937.1\|777088_777784_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_003098938.1\|777785_778307_+	YjbQ family protein	NA	NA	NA	NA
WP_003098940.1\|778425_779031_+	stage II sporulation protein M	NA	NA	NA	NA
WP_003098942.1\|779183_779504_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003098944.1\|779496_780090_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_003098945.1\|780086_780986_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_003098946.1\|781065_782097_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_017794663.1\|782437_783361_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_100185178.1\|783720_784641_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003098952.1\|784653_787146_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_003098954.1\|787458_787962_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_003098956.1\|788111_789038_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003098957.1\|789246_789888_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003098958.1\|789899_790907_-	sugar kinase	NA	NA	NA	NA
WP_003098959.1\|790929_791571_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_003098960.1\|791584_792397_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_003098962.1\|792726_793161_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_016355781.1\|793160_794360_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA
WP_003098964.1\|794396_794888_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003098966.1\|794908_795775_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_003098967.1\|795761_796577_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_003098968.1\|796647_798564_+	alginate lyase family protein	NA	NA	NA	NA
WP_003098969.1\|798659_799661_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003098971.1\|799720_803224_-	polysaccharide lyase 8 family protein	NA	NA	NA	NA
WP_003098973.1\|803489_804365_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.7e-18	28.8
WP_003098975.1\|804364_805099_+	ABC transporter permease	NA	NA	NA	NA
WP_003098977.1\|805095_806184_+	sensor histidine kinase	NA	NA	NA	NA
WP_003098979.1\|806185_806782_+	response regulator transcription factor	NA	NA	NA	NA
WP_003098982.1\|807271_808147_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003098984.1\|808583_808859_+	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_003098986.1\|808913_809195_+	hypothetical protein	NA	NA	NA	NA
WP_003098987.1\|809213_809513_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003098989.1\|809524_809842_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003098990.1\|809857_811213_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_003098992.1\|811267_813814_+\|holin	choline trimethylamine-lyase	Q70BG9	Salmonella_phage	2.3e-06	38.7
WP_003098993.1\|813879_814836_+\|holin	choline TMA-lyase-activating enzyme	A0A2P0VNQ0	Tetraselmis_virus	1.1e-14	28.1

DBSCAN-SWA_4

837332 : 896378

Bacillus_phage(25.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099047.1\|837332_838694_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	3.3e-214	75.1
WP_003099048.1\|838807_840250_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA
WP_003099050.1\|840331_840838_-	DNA topology modulation protein	A0A097BYE2	Leuconostoc_phage	4.6e-28	38.1
WP_003099056.1\|842584_843760_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.6e-26	29.6
WP_003099057.1\|844062_844761_+	lantibiotic protection ABC transporter ATP-binding subunit	A0A2H4PQG7	Staphylococcus_phage	1.6e-58	50.9
WP_003099058.1\|844762_845518_+	ABC transporter permease	NA	NA	NA	NA
WP_003099060.1\|846040_847216_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003099063.1\|847568_848237_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.5e-21	31.9
WP_003098612.1\|848894_849848_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_089180045.1\|850550_851662_-\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003100581.1\|853627_854899_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.0e-92	46.2
WP_003100582.1\|854909_855485_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.0e-31	41.9
WP_003100584.1\|855507_857232_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	2.2e-37	30.2
WP_016355800.1\|857317_859297_-	amidase	NA	NA	NA	NA
WP_003100587.1\|859499_859970_+	DUF3013 family protein	NA	NA	NA	NA
WP_003100589.1\|860132_861086_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_003100591.1\|861085_861829_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_003100592.1\|861943_863194_+	hypothetical protein	NA	NA	NA	NA
WP_003100600.1\|863218_864259_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003100605.1\|864452_866633_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_003100608.1\|866706_867522_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_003100618.1\|867566_868604_-	M42 family metallopeptidase	NA	NA	NA	NA
WP_003100621.1\|868694_869159_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_003100624.1\|869264_871652_-	bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA	NA	NA	NA
WP_003100627.1\|871902_874122_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	U5J9N6	Bacillus_phage	6.3e-13	33.5
WP_003100630.1\|874131_874575_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003100632.1\|874588_875017_+	GtrA family protein	NA	NA	NA	NA
WP_003100634.1\|875119_875782_+	YdeI/OmpD-associated family protein	NA	NA	NA	NA
WP_003100636.1\|875858_876704_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003100637.1\|876834_877968_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	6.1e-20	31.3
WP_003100638.1\|878048_879656_+	alpha-glucosidase	NA	NA	NA	NA
WP_003100639.1\|879894_880971_+	hypothetical protein	NA	NA	NA	NA
WP_003100640.1\|881357_887627_+	pullulanase	NA	NA	NA	NA
WP_003100641.1\|887713_888712_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.6e-11	28.0
WP_003100643.1\|888862_890026_+	galactokinase	NA	NA	NA	NA
WP_003100645.1\|890038_891517_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_003100646.1\|891516_892512_+	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	3.7e-45	34.5
WP_003100648.1\|892564_892906_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_003100650.1\|892991_893360_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_003100651.1\|893529_894279_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.6e-24	43.2
WP_003100652.1\|894294_895089_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003100654.1\|895118_896378_+\|protease	site-2 protease family protein	NA	NA	NA	NA

DBSCAN-SWA_5

998675 : 1069284

Planktothrix_phage(13.33%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100830.1\|998675_999128_+\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA
WP_172952522.1\|999146_999854_+\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_003100833.1\|999917_1000844_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003100835.1\|1001175_1002057_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_003098612.1\|1002517_1003471_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003100836.1\|1003634_1003823_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_003100837.1\|1003964_1004330_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003100838.1\|1004329_1005994_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_003100840.1\|1006331_1007222_+	SPFH domain-containing protein	A0A1V0SL90	Klosneuvirus	2.7e-31	32.1
WP_016355825.1\|1007289_1007406_-	putative metal homeostasis protein	NA	NA	NA	NA
WP_003100842.1\|1007603_1008344_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.8e-26	39.1
WP_003100845.1\|1008336_1009905_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_003100846.1\|1010387_1011227_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_003100848.1\|1011346_1012108_+	adaptor protein MecA	NA	NA	NA	NA
WP_016355826.1\|1012110_1013271_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_003100850.1\|1013394_1014165_+	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	8.6e-10	27.5
WP_003100851.1\|1014235_1015498_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_003100852.1\|1015516_1016743_+	cysteine desulfurase	Q2XUY6	environmental_halophage	1.8e-105	44.3
WP_003100854.1\|1016729_1017167_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003100855.1\|1017197_1018616_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_172952523.1\|1018757_1019894_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.8e-11	25.6
WP_089180045.1\|1020060_1021171_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_017794608.1\|1021263_1022472_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_003100860.1\|1022540_1023779_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_003100861.1\|1024095_1026075_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003100862.1\|1026139_1027639_+	ABC transporter permease	NA	NA	NA	NA
WP_003100863.1\|1027638_1028565_+	ABC transporter permease	NA	NA	NA	NA
WP_031239151.1\|1028570_1029641_+	ABC transporter ATP-binding protein	A0A2R8FFL6	Cedratvirus	4.7e-06	24.7
WP_003100865.1\|1029633_1030557_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-21	34.1
WP_003100867.1\|1038599_1038914_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_016355831.1\|1038971_1039505_-	DUF402 domain-containing protein	NA	NA	NA	NA
WP_003100869.1\|1039586_1040363_-	recombination regulator RecX	NA	NA	NA	NA
WP_003100871.1\|1040448_1041804_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	9.7e-73	33.1
WP_003100873.1\|1041922_1042798_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	5.2e-11	37.4
WP_003100874.1\|1042811_1043804_+	sugar transferase	NA	NA	NA	NA
WP_003100875.1\|1043812_1045540_+	SP_1767 family glycosyltransferase	A0A0F7L2F7	uncultured_marine_virus	2.0e-06	31.2
WP_003100876.1\|1045546_1046428_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	8.9e-11	42.4
WP_003100877.1\|1046518_1047724_+	family 8 glycosyl transferase	NA	NA	NA	NA
WP_051015175.1\|1048227_1053843_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_016355840.1\|1053920_1055615_-\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.7e-103	41.0
WP_003100880.1\|1055778_1057044_+	accessory Sec system protein translocase subunit SecY2	NA	NA	NA	NA
WP_003100882.1\|1057054_1058626_+	accessory Sec system protein Asp1	NA	NA	NA	NA
WP_003100884.1\|1058632_1060210_+	accessory Sec system protein Asp2	NA	NA	NA	NA
WP_003100886.1\|1060209_1060746_+	accessory Sec system protein Asp3	NA	NA	NA	NA
WP_100185179.1\|1060765_1063144_+	accessory Sec system translocase SecA2	NA	NA	NA	NA
WP_003100890.1\|1063155_1064673_+	accessory Sec system glycosyltransferase GtfA	NA	NA	NA	NA
WP_003100892.1\|1064656_1065964_+	accessory Sec system glycosylation chaperone GtfB	NA	NA	NA	NA
WP_003100893.1\|1065977_1066145_+	hypothetical protein	NA	NA	NA	NA
WP_003100895.1\|1066217_1067096_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003100897.1\|1067544_1067952_+	hypothetical protein	NA	NA	NA	NA
WP_003099060.1\|1068108_1069284_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_6

1216843 : 1356876

117

Staphylococcus_phage(18.52%)

transposase,tRNA,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099060.1\|1216843_1218019_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003101132.1\|1218114_1218327_+	competence protein CoiA	NA	NA	NA	NA
WP_089180059.1\|1218336_1219442_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_003100090.1\|1219583_1220273_+	competence protein CoiA	NA	NA	NA	NA
WP_003100091.1\|1220298_1222101_+	oligoendopeptidase F	NA	NA	NA	NA
WP_003100092.1\|1222102_1222756_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003100094.1\|1222791_1223436_+	HAD family hydrolase	NA	NA	NA	NA
WP_003100096.1\|1223606_1224314_+	O-methyltransferase	NA	NA	NA	NA
WP_003100098.1\|1224377_1225319_+	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_003100100.1\|1225616_1228235_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.3e-61	33.6
WP_003100102.1\|1228362_1229007_-	hypothetical protein	NA	NA	NA	NA
WP_003100103.1\|1229104_1229797_-	hypothetical protein	NA	NA	NA	NA
WP_003100105.1\|1230187_1230970_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_003100106.1\|1230986_1232162_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003100107.1\|1232232_1232613_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	9.8e-23	46.2
WP_003100108.1\|1232847_1233042_-	hypothetical protein	NA	NA	NA	NA
WP_003100109.1\|1233248_1233368_-\|transposase	transposase	NA	NA	NA	NA
WP_003100110.1\|1233446_1234697_-	chloride channel protein	NA	NA	NA	NA
WP_003100111.1\|1234790_1235750_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	8.2e-127	69.9
WP_003100112.1\|1236213_1238373_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.7e-258	61.6
WP_003100113.1\|1238402_1238621_-	glutaredoxin-like protein NrdH	A0A249XUR7	Enterococcus_phage	5.8e-12	42.7
WP_000146945.1\|1239144_1239408_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003100126.1\|1239412_1241146_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_031238984.1\|1241282_1242710_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003100130.1\|1242856_1244137_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003100131.1\|1244326_1245415_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.6e-31	32.9
WP_003100132.1\|1245567_1246194_+	uridine kinase	A0A1V0SAA3	Catovirus	1.0e-32	37.7
WP_003100133.1\|1246202_1246481_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_003100134.1\|1246579_1247077_+	GAF domain-containing protein	NA	NA	NA	NA
WP_003100135.1\|1247076_1248750_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.1e-47	41.6
WP_003100136.1\|1248800_1249004_+	DUF3272 family protein	NA	NA	NA	NA
WP_017794607.1\|1248984_1249920_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
WP_016355875.1\|1250082_1252362_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_003100140.1\|1252746_1253934_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.6e-140	66.8
WP_037583621.1\|1254116_1255376_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003100142.1\|1255625_1257170_+	MFS transporter	NA	NA	NA	NA
WP_003100144.1\|1257228_1258254_+	sugar kinase	NA	NA	NA	NA
WP_003100145.1\|1258360_1259044_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_003100147.1\|1259155_1259773_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003100148.1\|1259783_1261184_+	glucuronate isomerase	NA	NA	NA	NA
WP_003100150.1\|1261206_1262253_+	mannonate dehydratase	NA	NA	NA	NA
WP_003100151.1\|1262303_1263143_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003100157.1\|1264862_1265669_+	HAD family hydrolase	NA	NA	NA	NA
WP_003100159.1\|1265699_1267490_+	beta-hexosamidase	NA	NA	NA	NA
WP_003100161.1\|1267642_1268194_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003100163.1\|1268186_1269476_+	CBS domain-containing protein	NA	NA	NA	NA
WP_003100165.1\|1269502_1270363_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_003100167.1\|1270364_1271318_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003100169.1\|1271388_1272672_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003100171.1\|1272664_1273183_+	shikimate kinase	NA	NA	NA	NA
WP_003100173.1\|1273310_1274747_+	LCP family protein	NA	NA	NA	NA
WP_003100174.1\|1274828_1276187_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	3.8e-194	74.9
WP_003100176.1\|1276456_1277335_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_003100177.1\|1277312_1277885_+	SLATT domain-containing protein	NA	NA	NA	NA
WP_089180059.1\|1279668_1280774_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_017795003.1\|1280989_1281853_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_089180045.1\|1282185_1283297_-\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_089180045.1\|1284048_1285159_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003099068.1\|1286619_1286925_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_003099069.1\|1287086_1289066_+	DUF1430 domain-containing protein	NA	NA	NA	NA
WP_003099070.1\|1289067_1289697_+\|bacteriocin	putative bacteriocin export ABC transporter	G9BWD6	Planktothrix_phage	5.8e-20	33.3
WP_037583502.1\|1290237_1291983_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_003099087.1\|1292307_1293027_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003099091.1\|1293207_1293780_-	dihydrofolate reductase family protein	NA	NA	NA	NA
WP_003099060.1\|1293897_1295073_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003099095.1\|1295285_1295789_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003099096.1\|1296018_1297539_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	3.8e-41	27.7
WP_003099097.1\|1297773_1298979_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_003099100.1\|1299060_1300377_+	4-hydroxybutyrate CoA-transferase	NA	NA	NA	NA
WP_003099102.1\|1300391_1302650_+	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_003099104.1\|1302690_1303884_+	thiolase family protein	NA	NA	NA	NA
WP_003099107.1\|1304042_1304969_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003099109.1\|1305092_1305479_+	PaaI family thioesterase	NA	NA	NA	NA
WP_003099110.1\|1305605_1306262_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.6e-15	29.5
WP_003099111.1\|1306258_1307032_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_003099114.1\|1307074_1308559_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_003099115.1\|1308876_1310097_+	MFS transporter	NA	NA	NA	NA
WP_003099116.1\|1310115_1310622_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003099117.1\|1310689_1311052_-	thioesterase family protein	NA	NA	NA	NA
WP_003099118.1\|1311165_1311894_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_003099120.1\|1311914_1312832_-	magnesium transporter CorA	NA	NA	NA	NA
WP_003099121.1\|1312941_1314672_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-44	27.9
WP_003099124.1\|1314661_1316392_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-36	28.0
WP_003099125.1\|1316700_1317942_-	aminopeptidase	NA	NA	NA	NA
WP_003099126.1\|1318123_1318252_+	DUF4044 domain-containing protein	NA	NA	NA	NA
WP_003099128.1\|1318304_1319621_+	GTPase ObgE	NA	NA	NA	NA
WP_003099130.1\|1319650_1319803_+	hypothetical protein	NA	NA	NA	NA
WP_003099132.1\|1319850_1320564_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA
WP_100185184.1\|1320588_1322100_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	1.2e-26	25.6
WP_003099135.1\|1322394_1323135_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-37	43.3
WP_003099137.1\|1323136_1325308_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_003099140.1\|1325482_1327474_+	excinuclease ABC subunit B	NA	NA	NA	NA
WP_003099143.1\|1327683_1327827_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_003099148.1\|1327838_1329377_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	1.5e-37	28.6
WP_003099152.1\|1329373_1330633_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	4.1e-17	24.7
WP_003099154.1\|1330646_1330892_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_003099157.1\|1330884_1332144_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_017794599.1\|1332370_1333627_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003099161.1\|1333700_1335401_+	alpha-glycosidase	NA	NA	NA	NA
WP_003099163.1\|1335422_1337555_+	IPT/TIG domain-containing protein	NA	NA	NA	NA
WP_003099164.1\|1337625_1338930_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003099165.1\|1338929_1339790_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003099166.1\|1339810_1340641_+	hypothetical protein	NA	NA	NA	NA
WP_003099168.1\|1340796_1342515_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.8e-103	41.0
WP_003099169.1\|1342511_1343309_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003099170.1\|1343479_1344316_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_016355889.1\|1344315_1345665_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_003099172.1\|1345881_1347135_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_003099173.1\|1347361_1348381_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003099174.1\|1348484_1349993_+	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_003099176.1\|1350009_1352274_+	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	6.5e-13	43.7
WP_003099177.1\|1352324_1352630_-	hypothetical protein	NA	NA	NA	NA
WP_003099179.1\|1352843_1353830_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_003099181.1\|1353927_1354731_+	cation transporter	NA	NA	NA	NA
WP_031239140.1\|1354745_1355660_+	TDT family transporter	NA	NA	NA	NA
WP_016355892.1\|1355683_1355860_-	DUF3042 family protein	NA	NA	NA	NA
WP_031239141.1\|1355988_1356876_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA

DBSCAN-SWA_7

1514332 : 1522705

Bacillus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099499.1\|1514332_1515136_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-17	30.0
WP_003099501.1\|1515147_1515906_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-18	32.9
WP_003099503.1\|1515960_1516614_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_003099506.1\|1516675_1519213_+	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	1.3e-67	24.4
WP_003099507.1\|1519333_1520008_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-27	32.4
WP_016355994.1\|1520087_1521311_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	1.3e-12	28.6
WP_071794725.1\|1521482_1521737_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_003099512.1\|1521784_1522705_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	1.4e-30	33.6

DBSCAN-SWA_8

1534204 : 1591645

Streptococcus_phage(29.41%)

transposase,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071127661.1\|1534204_1534441_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003099526.1\|1534617_1536333_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-270	83.0
WP_003099527.1\|1536479_1537049_-	ECF transporter S component	NA	NA	NA	NA
WP_003099529.1\|1537115_1537661_-	phosphopantothenoylcysteine decarboxylase	A0A1V0S7W6	Shearwaterpox_virus	2.0e-21	32.8
WP_017794671.1\|1537653_1538343_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_003099531.1\|1538518_1539343_+	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_003099533.1\|1539456_1541127_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_003099534.1\|1541245_1542835_+	cardiolipin synthase	NA	NA	NA	NA
WP_003099536.1\|1543093_1544173_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_016355997.1\|1544208_1545138_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_017794672.1\|1545245_1545584_+	hypothetical protein	A0A248SK58	Salicola_phage	3.7e-05	34.5
WP_003099541.1\|1545606_1546869_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.3e-100	47.4
WP_003099543.1\|1547048_1548593_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.2e-49	29.3
WP_003099545.1\|1548710_1548887_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_003099550.1\|1549291_1549444_+	hypothetical protein	NA	NA	NA	NA
WP_003099551.1\|1549453_1549798_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_003099552.1\|1549803_1551273_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.1e-210	74.7
WP_003099553.1\|1551543_1552446_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
WP_003099555.1\|1552521_1553172_-	hemolysin III family protein	NA	NA	NA	NA
WP_003099557.1\|1553168_1553618_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_003099561.1\|1553966_1555253_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003099563.1\|1555249_1556089_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003099566.1\|1556557_1557412_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003099568.1\|1557395_1558181_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	4.4e-25	38.6
WP_003099570.1\|1558193_1558742_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003099573.1\|1558807_1559653_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003099575.1\|1559749_1561885_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	6.4e-103	36.5
WP_003099578.1\|1561978_1562863_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003099589.1\|1563028_1564087_+	PTS transporter subunit IIC	NA	NA	NA	NA
WP_003099592.1\|1564105_1565098_+	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.3e-39	33.4
WP_003099599.1\|1565203_1565869_+	DNA-binding protein	NA	NA	NA	NA
WP_003099601.1\|1565868_1566582_+	DUF3307 domain-containing protein	NA	NA	NA	NA
WP_003099603.1\|1566711_1568046_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_003099606.1\|1568184_1568670_-	hypothetical protein	NA	NA	NA	NA
WP_003099608.1\|1568868_1569621_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-30	36.3
WP_037583456.1\|1569622_1571578_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_003099615.1\|1571620_1572286_+	response regulator transcription factor	NA	NA	NA	NA
WP_031239170.1\|1572282_1573230_+	sensor histidine kinase	NA	NA	NA	NA
WP_003099619.1\|1573231_1573567_+	hypothetical protein	NA	NA	NA	NA
WP_003099620.1\|1573655_1574726_-	tyrosine recombinase XerS	NA	NA	NA	NA
WP_003099621.1\|1574939_1575563_-	hypothetical protein	NA	NA	NA	NA
WP_037583453.1\|1575579_1577085_-	serine/threonine protein kinase	A0A1S5V1U4	Saudi_moumouvirus	2.4e-08	25.4
WP_089180041.1\|1577669_1578775_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_089180045.1\|1579441_1580552_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003099625.1\|1581048_1582281_+	peptidoglycan bridge formation glycyltransferase FemA/FemB family protein	NA	NA	NA	NA
WP_003099626.1\|1582305_1582743_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003099627.1\|1582733_1583516_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003099628.1\|1583702_1584125_-	cupin domain-containing protein	Q2I8C5	Bacillus_phage	1.1e-38	61.8
WP_003099629.1\|1584248_1585277_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003099630.1\|1585447_1586140_+	helix-turn-helix transcriptional regulator	A0A1S5SAF1	Streptococcus_phage	4.6e-63	52.3
WP_003099631.1\|1586221_1586482_+	hypothetical protein	M1PG86	Streptococcus_phage	1.3e-13	52.9
WP_003099632.1\|1586544_1588116_-	signal recognition particle protein	NA	NA	NA	NA
WP_016356006.1\|1588127_1588460_-	putative DNA-binding protein	NA	NA	NA	NA
WP_003099634.1\|1588564_1589263_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003099635.1\|1589339_1590542_-	hypothetical protein	NA	NA	NA	NA
WP_003098612.1\|1590691_1591645_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8

DBSCAN-SWA_9

1618765 : 1739493

113

unidentified_phage(12.5%)

transposase,tRNA,protease,integrase

attL 1617780:1617801|attR 1666661:1666682

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1617780:1617801	attL	NA	NA	NA	NA
WP_089180041.1\|1618765_1619870_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_003099686.1\|1620647_1620833_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_016356012.1\|1620904_1621816_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_142924914.1\|1621899_1622343_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0N9SIX5	Staphylococcus_phage	8.7e-39	61.6
WP_003099691.1\|1622427_1623696_-	purine permease	Q9KX94	Enterobacteria_phage	5.2e-28	28.0
WP_003099696.1\|1623695_1624277_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_003099697.1\|1624518_1625502_-	GMP reductase	G3MBI2	Bacillus_virus	5.6e-139	75.4
WP_003099699.1\|1625755_1627285_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_037583443.1\|1627277_1628006_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-27	37.7
WP_100185188.1\|1628241_1629090_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003099704.1\|1629245_1629935_+	hypothetical protein	NA	NA	NA	NA
WP_003099705.1\|1630122_1630881_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003099706.1\|1630955_1631948_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_037583441.1\|1631964_1632858_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003099713.1\|1632854_1633691_-	NAD kinase	NA	NA	NA	NA
WP_003099716.1\|1633665_1634337_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_003099718.1\|1634430_1635003_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_003099722.1\|1635116_1636088_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	4.2e-38	35.5
WP_003099723.1\|1636091_1637207_+	cysteine desulfurase	H7BUW1	unidentified_phage	2.3e-27	35.8
WP_003099725.1\|1637208_1637556_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_003099727.1\|1637624_1637837_+	DUF4649 family protein	NA	NA	NA	NA
WP_003099729.1\|1638011_1638656_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_003099731.1\|1638664_1639366_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_003099737.1\|1640084_1641209_-	AI-2E family transporter	NA	NA	NA	NA
WP_003099738.1\|1641311_1642751_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_003099739.1\|1642889_1643489_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_003099740.1\|1643600_1644218_-	lipase/acylhydrolase	NA	NA	NA	NA
WP_003099741.1\|1644298_1645786_-	family 1 glycosylhydrolase	NA	NA	NA	NA
WP_003099742.1\|1646044_1646977_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003099743.1\|1647068_1648988_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_003099745.1\|1649274_1650102_-	PRD domain-containing protein	NA	NA	NA	NA
WP_003099747.1\|1650181_1651729_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_003099748.1\|1651946_1656491_-	S8 family serine peptidase	NA	NA	NA	NA
WP_003099750.1\|1656684_1657845_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_003099752.1\|1657867_1659175_-	2-hydroxycarboxylate transporter family protein	A0A140XAH4	Dickeya_phage	3.0e-18	56.1
WP_003099759.1\|1659335_1660856_+	sensor histidine kinase	NA	NA	NA	NA
WP_003099762.1\|1660857_1661529_+	response regulator	NA	NA	NA	NA
WP_003099766.1\|1661820_1662894_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003099768.1\|1662886_1663663_-	ABC transporter permease	NA	NA	NA	NA
WP_003099770.1\|1663659_1664454_-	ABC transporter permease	Q6GZ02	Mycoplasma_phage	3.3e-12	25.2
WP_003099772.1\|1664437_1665592_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.6e-36	40.3
WP_100185189.1\|1665626_1666520_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_003099776.1\|1666774_1667941_+\|transposase	IS30 family transposase	NA	NA	NA	NA
1666661:1666682	attR	NA	NA	NA	NA
WP_003099778.1\|1668192_1668684_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099779.1\|1668680_1669040_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003099781.1\|1669046_1669847_-	dihydropteroate synthase	NA	NA	NA	NA
WP_003099782.1\|1669856_1670420_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.0e-47	51.6
WP_003099784.1\|1670448_1671708_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_003099786.1\|1671791_1672652_-	homoserine kinase	NA	NA	NA	NA
WP_003099788.1\|1672653_1673940_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_003099793.1\|1674124_1675045_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003099056.1\|1675304_1676480_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.6e-26	29.6
WP_089180059.1\|1676824_1677930_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_003099798.1\|1677997_1678438_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	5.4e-17	36.8
WP_003099800.1\|1678660_1679026_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_003099802.1\|1679089_1679590_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_003098612.1\|1679853_1680807_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003099809.1\|1682366_1683080_-	hypothetical protein	NA	NA	NA	NA
WP_003099810.1\|1683187_1683787_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003099812.1\|1683796_1685026_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	9.5e-136	59.9
WP_003099817.1\|1685250_1685748_-	dihydrofolate reductase	A0A1L7N103	Ralstonia_phage	6.8e-16	36.7
WP_017794807.1\|1685826_1686666_-	thymidylate synthase	U5J9N5	Bacillus_phage	2.1e-81	53.2
WP_003099823.1\|1686861_1688034_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_071794728.1\|1688014_1689301_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003099830.1\|1689324_1690320_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_003099834.1\|1690300_1691320_-	phosphomevalonate kinase	NA	NA	NA	NA
WP_003099837.1\|1691312_1692257_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_003099844.1\|1692232_1693117_-	mevalonate kinase	NA	NA	NA	NA
WP_003099847.1\|1693247_1694990_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	3.1e-23	24.6
WP_003099849.1\|1694991_1696713_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-39	24.7
WP_003099850.1\|1697288_1699319_+	5'-nucleotidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_003099851.1\|1699354_1699765_-	peptide deformylase	NA	NA	NA	NA
WP_003099852.1\|1699844_1701194_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_003099853.1\|1701327_1703094_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.0e-51	29.9
WP_003099854.1\|1703093_1704836_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	24.4
WP_003099856.1\|1704937_1705417_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003099861.1\|1705418_1707305_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	8.2e-62	30.5
WP_003099863.1\|1707301_1708510_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.1e-39	43.6
WP_003099866.1\|1708506_1709274_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_003099869.1\|1709290_1710142_-	DegV family protein	NA	NA	NA	NA
WP_003099871.1\|1710141_1710522_-	DUF1149 family protein	NA	NA	NA	NA
WP_003099873.1\|1710594_1711116_-	hypothetical protein	NA	NA	NA	NA
WP_003099875.1\|1711312_1711786_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_003099876.1\|1711924_1712689_-	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	1.1e-09	38.4
WP_003099878.1\|1712813_1713428_-	glycoside hydrolase family 73 protein	NA	NA	NA	NA
WP_100185190.1\|1713516_1715469_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003099882.1\|1715465_1716377_-	1-phosphofructokinase	NA	NA	NA	NA
WP_003099883.1\|1716373_1717087_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_003099884.1\|1717248_1718172_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_003099885.1\|1718190_1719249_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_003099886.1\|1719384_1720383_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.2e-26	51.6
WP_016356032.1\|1720375_1721116_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003099888.1\|1721105_1721624_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003099889.1\|1721878_1723408_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003082623.1\|1723579_1723819_-	KH domain-containing protein	NA	NA	NA	NA
WP_003099891.1\|1723828_1724101_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_003099892.1\|1724371_1724980_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.8e-40	47.9
WP_017794652.1\|1724972_1726196_-	ABC transporter permease	NA	NA	NA	NA
WP_172952524.1\|1726207_1726900_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-37	41.7
WP_100185191.1\|1726939_1728184_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003099896.1\|1728450_1729710_-	uracil transporter	Q9KX94	Enterobacteria_phage	3.9e-60	37.1
WP_016356036.1\|1729724_1730246_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_003099901.1\|1730449_1731349_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003099904.1\|1731349_1731796_-	signal peptidase II	NA	NA	NA	NA
WP_003099906.1\|1731792_1732707_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.8e-06	28.5
WP_003099908.1\|1732851_1733145_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_016356038.1\|1733172_1733496_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003099910.1\|1733503_1733818_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_003098714.1\|1734129_1735083_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003099911.1\|1735214_1736126_+	nucleoside hydrolase	NA	NA	NA	NA
WP_003099912.1\|1736209_1736905_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_016356042.1\|1737000_1738197_-	CapA family protein	A0A2H4J434	uncultured_Caudovirales_phage	3.6e-39	35.1
WP_003099916.1\|1738278_1739493_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA

DBSCAN-SWA_10

2046367 : 2062177

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003101503.1\|2046367_2047195_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.9
WP_003101504.1\|2047196_2047856_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_003101505.1\|2048003_2048378_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003101507.1\|2048402_2048819_+	VOC family protein	NA	NA	NA	NA
WP_003101510.1\|2048969_2049872_+	cation transporter	M1Q1N9	Streptococcus_phage	4.2e-72	49.3
WP_003101511.1\|2049997_2051680_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.7e-103	41.0
WP_003101512.1\|2051671_2052028_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.0e-37	66.1
WP_003101518.1\|2052024_2052519_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.9e-42	53.5
WP_003101520.1\|2052588_2053764_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.0e-166	75.1
WP_003101521.1\|2053806_2054355_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.1e-50	59.6
WP_031239202.1\|2054378_2055470_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.0e-162	76.8
WP_003101523.1\|2055589_2056222_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003101524.1\|2056401_2057268_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	72.5
WP_003101525.1\|2057272_2057605_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.3e-28	56.5
WP_003101526.1\|2057594_2058395_-	signal peptidase II	NA	NA	NA	NA
WP_100185203.1\|2058391_2059267_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.8e-73	49.7
WP_003101530.1\|2059284_2059917_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-70	63.6
WP_003101532.1\|2059997_2060660_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	5.2e-64	59.4
WP_003101534.1\|2060702_2061413_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-18	28.1
WP_003101535.1\|2061412_2062177_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-16	27.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024844

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

692 : 11173

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100185207.1\|692_1310_+	recombinase family protein	A0A219YA40	Aeromonas_phage	1.0e-16	38.3
WP_100185208.1\|1309_3454_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	1.4e-267	98.4
WP_002387620.1\|3556_4453_+	ParA family protein	A0A1X9I765	Streptococcus_phage	5.1e-155	100.0
WP_000527317.1\|4557_4767_+	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	6.3e-32	100.0
WP_000301765.1\|4783_5056_+	antitoxin	A0A1X9I6E5	Streptococcus_phage	5.0e-05	100.0
WP_100185210.1\|5057_5921_+	zeta toxin family protein	NA	NA	NA	NA
WP_002338433.1\|6356_6674_+	hypothetical protein	A0A1W6JN36	Lactococcus_phage	3.5e-26	79.4
WP_010713926.1\|6693_7191_+	molecular chaperone DnaJ	NA	NA	NA	NA
WP_085444310.1\|7224_7458_+	thymidylate synthase ThyX	NA	NA	NA	NA
WP_010710189.1\|7485_8166_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	4.9e-126	98.7
WP_002352254.1\|8412_9060_-	type A-8 chloramphenicol O-acetyltransferase	A0A1X9I6V6	Streptococcus_phage	2.1e-70	56.3
WP_172952525.1\|9703_10384_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.1e-125	98.2
WP_100185212.1\|10408_11173_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	5.5e-134	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024843

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024844

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection