CRISPRimmunity

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100260197.1\|1653882_1654983_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	8.0e-25	29.6
WP_100260198.1\|1654979_1657388_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_100260199.1\|1657384_1658137_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_100260200.1\|1658146_1658737_-	hypothetical protein	NA	NA	NA	NA
WP_100260201.1\|1658880_1660425_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	2.5e-40	29.2
WP_100260202.1\|1660462_1661332_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_100260203.1\|1661331_1661889_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_100260204.1\|1661896_1662598_+	endonuclease	NA	NA	NA	NA
WP_100261446.1\|1662740_1663079_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_100261447.1\|1663096_1664437_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	2.5e-36	31.7
WP_100260205.1\|1664681_1667450_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.3e-10	36.0
WP_100260206.1\|1667517_1668051_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_100260207.1\|1668047_1669634_-	FAD-binding protein	A0A1V0SI18	Klosneuvirus	7.4e-64	32.2
WP_100260208.1\|1669658_1670597_-	sterol desaturase family protein	NA	NA	NA	NA
WP_100261448.1\|1670606_1671002_-	hypothetical protein	NA	NA	NA	NA
WP_100260209.1\|1671070_1672489_+	amidohydrolase	NA	NA	NA	NA
WP_100260210.1\|1672489_1672930_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_100261449.1\|1672926_1673745_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	5.0e-32	35.6
WP_100260211.1\|1674000_1674774_+	cold-shock protein	A0A218MMZ6	uncultured_virus	4.3e-09	44.6
WP_100260212.1\|1674907_1676095_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.1e-24	26.7
WP_100260213.1\|1676106_1677033_+	ornithine carbamoyltransferase	M1I6M4	Paramecium_bursaria_Chlorella_virus	5.0e-20	30.8
WP_100260214.1\|1677079_1677985_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_100260215.1\|1678110_1678521_+	hypothetical protein	NA	NA	NA	NA
WP_100260216.1\|1678560_1679277_+	7-cyano-7-deazaguanine synthase QueC	A0A2I7S903	Vibrio_phage	5.5e-27	37.5
WP_100261450.1\|1679314_1680925_+	MFS transporter	NA	NA	NA	NA
WP_100260217.1\|1680933_1681467_-	superoxide dismutase family protein	NA	NA	NA	NA
WP_100260218.1\|1681563_1682676_-	OmpA family protein	NA	NA	NA	NA
WP_100260219.1\|1682894_1683347_-	DUF2793 domain-containing protein	NA	NA	NA	NA
WP_100260220.1\|1683370_1685545_-	hypothetical protein	K4JVV3	Caulobacter_phage	5.6e-22	38.2
WP_157799445.1\|1685574_1685955_+	hypothetical protein	NA	NA	NA	NA
WP_100260221.1\|1685924_1686740_-	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	8.8e-21	27.3
WP_100260222.1\|1686736_1689049_-	DUF2460 domain-containing protein	A0A291LB82	Escherichia_phage	1.7e-56	30.1
WP_100260223.1\|1689060_1689642_-\|tail	tail tape measure protein	D6PEW0	uncultured_phage	5.3e-12	32.3
WP_100260224.1\|1689634_1689829_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_100260225.1\|1689830_1690133_-	gene transfer agent family protein	NA	NA	NA	NA
WP_100260226.1\|1690129_1690537_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_100260227.1\|1690558_1690948_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_100260228.1\|1691093_1691393_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_100260229.1\|1691492_1692644_-\|capsid	phage major capsid protein	Q8W627	Enterobacteria_phage	6.3e-81	46.6
WP_100260230.1\|1692719_1693193_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.6e-11	36.2
WP_100260231.1\|1693114_1693423_-	hypothetical protein	K4I011	Acidithiobacillus_phage	1.5e-10	50.0
WP_100260232.1\|1693422_1694571_-\|portal	phage portal protein	W8ECU7	Geobacillus_phage	4.5e-47	38.3
WP_100261451.1\|1694585_1695845_-	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	2.0e-80	42.6

DBSCAN-SWA_2

2140712 : 2206130

Leptospira_phage(15.38%)

protease,transposase,capsid,integrase

attL 2151674:2151689|attR 2207294:2207309

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100260598.1\|2140712_2141884_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.6e-50	42.8
WP_100260599.1\|2142252_2144355_-	DUF87 domain-containing protein	NA	NA	NA	NA
WP_100260600.1\|2144354_2145776_-	hypothetical protein	NA	NA	NA	NA
WP_100260601.1\|2145769_2146981_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_100260602.1\|2146973_2149025_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_100260603.1\|2149029_2151807_-	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	3.0e-113	33.0
2151674:2151689	attL	NA	NA	NA	NA
WP_100260604.1\|2151959_2153138_-\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	1.5e-40	34.3
WP_100260605.1\|2153134_2154127_-\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	1.6e-37	33.7
WP_157799485.1\|2154551_2154842_+	hypothetical protein	NA	NA	NA	NA
WP_157799486.1\|2155095_2155767_+	hypothetical protein	NA	NA	NA	NA
WP_100260607.1\|2155957_2156554_-	hypothetical protein	NA	NA	NA	NA
WP_100260608.1\|2156617_2156893_+	hypothetical protein	NA	NA	NA	NA
WP_100261488.1\|2157459_2157873_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_100260609.1\|2158062_2158710_-	hypothetical protein	NA	NA	NA	NA
WP_100260610.1\|2158711_2158954_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157799487.1\|2159050_2159788_-	hypothetical protein	NA	NA	NA	NA
WP_100260612.1\|2160233_2162111_-	signal peptide peptidase SppA	A0A2I6UG67	Salinibacter_virus	6.1e-17	32.0
WP_100260613.1\|2162222_2163248_+	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	7.4e-25	35.8
WP_100260614.1\|2163244_2164477_+	amidohydrolase family protein	NA	NA	NA	NA
WP_100260615.1\|2164540_2165869_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_100260616.1\|2165911_2166442_-	hypothetical protein	NA	NA	NA	NA
WP_100260617.1\|2166472_2167189_-	ParA family protein	A0A0K1Y6H3	Rhodobacter_phage	6.0e-05	36.0
WP_100260618.1\|2167404_2168394_+	sporulation protein	NA	NA	NA	NA
WP_100261489.1\|2168557_2169724_+	DUF418 domain-containing protein	NA	NA	NA	NA
WP_100260619.1\|2169672_2170176_+	bacterioferritin	NA	NA	NA	NA
WP_100261490.1\|2170176_2170665_-	DUF2721 domain-containing protein	NA	NA	NA	NA
WP_100260620.1\|2170667_2172101_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_100260621.1\|2172189_2172774_+	CHAP domain-containing protein	NA	NA	NA	NA
WP_100260622.1\|2172774_2173059_-	DUF3297 family protein	NA	NA	NA	NA
WP_157799488.1\|2173114_2173360_-	hypothetical protein	NA	NA	NA	NA
WP_100260624.1\|2173660_2175226_+	trigger factor	NA	NA	NA	NA
WP_100260625.1\|2175295_2176663_-	sodium:proton antiporter	NA	NA	NA	NA
WP_100260626.1\|2176669_2178211_-	amidase	NA	NA	NA	NA
WP_100260627.1\|2178251_2180300_-	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA
WP_100260629.1\|2180558_2181272_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.9e-59	58.6
WP_100260630.1\|2181462_2182728_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.9e-129	56.7
WP_100260631.1\|2182896_2183550_+	response regulator	NA	NA	NA	NA
WP_100260632.1\|2183625_2186349_-	TonB-dependent receptor	NA	NA	NA	NA
WP_100260633.1\|2186457_2188032_-	hypothetical protein	NA	NA	NA	NA
WP_100260634.1\|2188297_2188681_+	hypothetical protein	NA	NA	NA	NA
WP_100260635.1\|2188906_2189461_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	3.8e-23	48.7
WP_100260636.1\|2189467_2189770_+	type VI secretion protein	NA	NA	NA	NA
WP_090478181.1\|2189771_2190056_+	type VI secretion protein	NA	NA	NA	NA
WP_100260637.1\|2190045_2192481_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_100260638.1\|2192477_2193647_+	type IV secretion system protein	NA	NA	NA	NA
WP_100260639.1\|2193643_2194417_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_100260640.1\|2194416_2195550_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_100260641.1\|2195564_2196593_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_100260642.1\|2196793_2199811_+	TonB-dependent receptor	NA	NA	NA	NA
WP_100260643.1\|2199868_2200585_-	queuosine precursor transporter	A0A1W7AG82	Streptococcus_virus	1.4e-25	35.1
WP_157799489.1\|2201090_2201561_-	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_100260645.1\|2202105_2202429_-	hypothetical protein	NA	NA	NA	NA
WP_100260646.1\|2202428_2202698_-	hypothetical protein	NA	NA	NA	NA
WP_100260647.1\|2202702_2204700_-	hypothetical protein	A0A0H4ADF4	Pseudoalteromonas_phage	2.2e-41	40.9
WP_157799490.1\|2204819_2206130_-\|capsid	phage major capsid protein	G8EXZ9	Synechococcus_phage	4.7e-24	31.6
2207294:2207309	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2730848 : 2747816

Streptococcus_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100261120.1\|2730848_2733074_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-13	32.5
WP_100261121.1\|2733164_2735351_+	EAL domain-containing protein	A0A2D0W9B6	Bordetella_phage	1.1e-06	38.6
WP_100261122.1\|2735415_2737233_+	elongation factor 4	A0A2K9L2P9	Tupanvirus	1.2e-22	43.7
WP_100261123.1\|2737311_2738250_+	restriction endonuclease	NA	NA	NA	NA
WP_100261124.1\|2738246_2738675_-	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	2.4e-38	51.1
WP_100261125.1\|2738675_2739719_-	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	4.1e-103	56.1
WP_100261126.1\|2739821_2740640_-	hypothetical protein	A0A0N9SJ94	Pseudomonas_phage	4.0e-05	40.5
WP_100261127.1\|2740709_2741975_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.5e-96	45.7
WP_100261128.1\|2742021_2742909_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	9.9e-18	28.1
WP_100261129.1\|2743018_2744167_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.4e-48	34.0
WP_100261130.1\|2744242_2745046_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_100261131.1\|2745344_2745518_+	YdcH family protein	NA	NA	NA	NA
WP_100261132.1\|2745606_2746797_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.0e-97	52.9
WP_100261133.1\|2746796_2747816_+	TerC family protein	K4F9T9	Cronobacter_phage	3.6e-40	35.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024920

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection