CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024883	Klebsiella aerogenes strain AR_0007 chromosome, complete genome	3 crisprs	WYL,DEDDh,cas3,csa3,DinG	1	4	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024883_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024883_1

1017372-1017571

Orphan

Consensus_repeat	Method
CGCCGCCATCCGGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTA	PILER-CR
GGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTACGGTTC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP024883_1

>merge|NZ_CP024883|1|1017372-1017571|PILER-CR,CRISPRCasFinder
TATTCCCTGCTCGCGCAGCACGGTTCCAGATCGTTGGGTAGCCCGGATAAGGCGCAACGCGCCGCCATCCGGGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTACGGTTCTGAGCGTTAGGTAGCCCGGATAAGGCGCAACGCGCCGCCATCCGGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTACGGTTC

>NZ_CP024883|1|1|1017372-1017565|PILER-CR
TATTCCCTGCTCGCGCAGCACGGTTCCAGATCGTTGGGTAGCCCGGATAA	GGCGCAACGCGCCGCCATCCGGGGGTATTCCCTGCTCGCGCTG
CGCTTAGCAGGGCTACGGTTCTGAGCGTTAGGTAGCCCGGATAAGGCGCA	ACGCGCCGCCATCCGGGGTATTCCCTGCTCGCGCTGCG
CTTAGCAGGGCTA

>NZ_CP024883|1|1|1017443-1017571|CRISPRCasFinder
GGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTACGGTTC	TGAGCGTTAGGTAGCCCGGATAAGGCGCAACGCGCCGCCATCC
GGGGTATTCCCTGCTCGCGCTGCGCTTAGCAGGGCTACGGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024883.1\|WP_100279329.1\|1019354_1020575_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|235348
NZ_CP024883.1\|WP_015369308.1\|1018794_1019352_+\|DcrB-family-lipoprotein	unknown	unknown	gnl\|CDD\|183232
NZ_CP024883.1\|WP_015369302.1\|1022955_1023537_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226995
NZ_CP024883.1\|WP_015369304.1\|1022428_1022686_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|181682
NZ_CP024883.1\|WP_015369303.1\|1022697_1022949_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|180033
NZ_CP024883.1\|WP_015369313.1\|1013946_1014318_-\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP024883.1\|WP_015369319.1\|1007165_1008269_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|237959
NZ_CP024883.1\|WP_015369312.1\|1014447_1015074_+\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|226237
NZ_CP024883.1\|WP_015369309.1\|1018055_1018721_+\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	unknown	unknown	gnl\|CDD\|183041
NZ_CP024883.1\|WP_100279327.1\|1011421_1012873_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP024883.1\|WP_015369318.1\|1009702_1010758_-\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_CP024883.1\|WP_015703711.1\|1017602_1017848_-\|sulfurtransferase-TusA	unknown	unknown	gnl\|CDD\|178967
NZ_CP024883.1\|WP_100279331.1\|1021632_1022448_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP024883.1\|WP_015369317.1\|1010750_1011419_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|182829
NZ_CP024883.1\|WP_100280061.1\|1013066_1013663_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	unknown	unknown	gnl\|CDD\|236793
NZ_CP024883.1\|WP_002920815.1\|1008592_1009447_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP024883.1\|WP_015369314.1\|1013652_1013931_+\|DUF1145-family-protein	unknown	unknown	gnl\|CDD\|182831
NZ_CP024883.1\|WP_100279328.1\|1015152_1017360_+\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	unknown	unknown	gnl\|CDD\|236827
NZ_CP024883.1\|WP_100279330.1\|1020913_1021636_+\|beta-ketoacyl-synthase-chain-length-factor	unknown	unknown	gnl\|CDD\|379349
NZ_CP024883.1\|WP_100279332.1\|1023533_1024883_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|223442

Protein	Function_ID	Function_description	E-value
NZ_CP024883.1\|WP_100279329.1\|1019354_1020575_-\|MFS-transporter	gnl\|CDD\|235348	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional.	0
NZ_CP024883.1\|WP_015369308.1\|1018794_1019352_+\|DcrB-family-lipoprotein	gnl\|CDD\|183232	PRK11615, PRK11615, hypothetical protein; Provisional.	1.25666e-113
NZ_CP024883.1\|WP_015369302.1\|1022955_1023537_+\|hypothetical-protein	gnl\|CDD\|226995	COG4648, COG4648, Predicted membrane protein [Function unknown].	2.13394e-68
NZ_CP024883.1\|WP_015369304.1\|1022428_1022686_+\|acyl-carrier-protein	gnl\|CDD\|181682	PRK09184, PRK09184, acyl carrier protein; Provisional.	3.88646e-24
NZ_CP024883.1\|WP_015369303.1\|1022697_1022949_+\|acyl-carrier-protein	gnl\|CDD\|180033	PRK05350, PRK05350, acyl carrier protein; Provisional.	2.96243e-37
NZ_CP024883.1\|WP_015369313.1\|1013946_1014318_-\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	2.77685e-30
NZ_CP024883.1\|WP_015369319.1\|1007165_1008269_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
NZ_CP024883.1\|WP_015369312.1\|1014447_1015074_+\|lysoplasmalogenase	gnl\|CDD\|226237	COG3714, COG3714, Predicted membrane protein [Function unknown].	9.58425e-50
NZ_CP024883.1\|WP_015369309.1\|1018055_1018721_+\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	gnl\|CDD\|183041	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter.	6.10566e-138
NZ_CP024883.1\|WP_100279327.1\|1011421_1012873_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP024883.1\|WP_015369318.1\|1009702_1010758_-\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_CP024883.1\|WP_015703711.1\|1017602_1017848_-\|sulfurtransferase-TusA	gnl\|CDD\|178967	PRK00299, PRK00299, sulfurtransferase TusA.	4.86185e-54
NZ_CP024883.1\|WP_100279331.1\|1021632_1022448_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.28285e-33
NZ_CP024883.1\|WP_015369317.1\|1010750_1011419_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|182829	PRK10908, PRK10908, cell division ATP-binding protein FtsE.	1.48012e-160
NZ_CP024883.1\|WP_100280061.1\|1013066_1013663_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	gnl\|CDD\|236793	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.	2.07929e-148
NZ_CP024883.1\|WP_002920815.1\|1008592_1009447_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP024883.1\|WP_015369314.1\|1013652_1013931_+\|DUF1145-family-protein	gnl\|CDD\|182831	PRK10910, PRK10910, DUF1145 family protein.	8.64202e-45
NZ_CP024883.1\|WP_100279328.1\|1015152_1017360_+\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	0
NZ_CP024883.1\|WP_100279330.1\|1020913_1021636_+\|beta-ketoacyl-synthase-chain-length-factor	gnl\|CDD\|379349	pfam13723, Ketoacyl-synt_2, Beta-ketoacyl synthase, N-terminal domain.	8.17013e-79
NZ_CP024883.1\|WP_100279332.1\|1023533_1024883_+\|acyl-CoA-synthetase	gnl\|CDD\|223442	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism].	2.25356e-55

>NZ_CP024883.1|WP_100279328.1|1015152_1017360_+|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA
MSTPESQDKKVPQFSSFKFTPATAPAESCCTDHNCAGETASAEQPLNGARYSWQVEGMDCAACARKVETAVRQIDGVSQVQVLFATEKLLVNADSDIRSQVENAVRAAGYTLRDADAPQEEKPQGSWLQENLALLSLVVMMALSWGLEQFNHPFGKLAFVATTLVGLWPVARQALRLIKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPDTAVRLRNGERETVSQRDLRPGDVIEVAAGGRLPADGELLSPFASFDESALTGESVPVERKAGERVAAGATSVDRLVQLSVISEPGDSAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMVVALLVAIVPPLFFASAWLPWIYKGLTLLLIGCPCALVISTPAAITSGLAVAARRGALIKGGAALEQLGQVRQVAFDKTGTLTIGQPQVTHVITTADVDENGLLALAAAVEQGSSHPLAQAIVREAQQRKLTLPVARNQRALAGSGIEAEVNGSRILICAASKAAPAEHEAQIQQLESVGQTVVLVMRDDTLLGILALRDTLRDDARQAVEELHQLGVQGVILTGDNPRAAAAIANELGLQFRAGLLPADKVNAVMALNANAPLAMVGDGINDAPAMKAATIGIAMGSGTDVALETADAALTHNRLTGLAQMISLARATHANIRQNIAIALGLKGIFLVTTLLGLTGLWLAVLADTGATVLVTANALRLLRKK
>NZ_CP024883.1|WP_015369312.1|1014447_1015074_+|lysoplasmalogenase
MLWSFIAVCFSAWLYVDASYRGPAWQRWVFKPVTLLLLLLLAWQAPMFNAISYLVLAGLCASLLGDALTLLPRQRVMYAVGAFFLSHLLYTIWFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEMRMPVLTFIGMTLVMVWLAGELWFVRPTDTALSGFLGAASLLLGNAVWLISHYRRRFRADNAISAAFYFAGHFLIVRALYL
>NZ_CP024883.1|WP_015369313.1|1013946_1014318_-|DUF2500-domain-containing-protein
MGTQMSKVPLFFVLVVAVIVVAASFRYVQQRREKMDNDAAPLLQKRVVVSNKREKVINDRRSRQQTVTPAGSEMRYEASFRPENGGLEVVFRLDAPQYHALSVGDRGMLSYKGSKFVDFVADN
>NZ_CP024883.1|WP_015369314.1|1013652_1013931_+|DUF1145-family-protein
MLINLGRLLMLCVWAFLLLNLFQPFPKPLNIFVNVALIFMILMHGLQLTLLKATQTKDAPPLSRFEQIRIFIFGVFELVAWQKKLKATLKKK
>NZ_CP024883.1|WP_100280061.1|1013066_1013663_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase
MKKPNHAGSGQIRIIGGQWRGRKLPVPESPGLRPTTDRVRETLFNWLAPSMVDAHCLDCFAGSGALGLEALSRYAASTTLLEMERGVAQQLQKNLATLKASNGKVVNTNTLEFLSQPGTPHHIVFVDPPFRKGLLEETLSLLEKNHWLADEALIYVESEVENGLPPVPANWQLYREKAAGQVAYRLYQREAQGENHAD
>NZ_CP024883.1|WP_100279327.1|1011421_1012873_-|signal-recognition-particle-docking-protein-FtsY
MAKEKKRGFFSWLGFGQKEQAQESETEQKVEEQQEVVEQTPAAEMPAETVPAAETVKEDPEAFAAEVVEVTEQVVESELPHPVVTEAVAQEKVAEPLVEEVIAEPVIAEAVAEQTPEEVIVAEPEVIEDELLPEEPEAELSDEELEAQALAVQDVEEAPEEEAETQEAAPQEQEKPTKEGFFARLKRSLVKTKQNLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMSEILTKVEEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNEIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVDAPHEVMLTIDASTGQNAISQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFSIPIRYIGVGERIEDLRPFNAGDFIEALFARED
>NZ_CP024883.1|WP_015369317.1|1010750_1011419_-|cell-division-ATP-binding-protein-FtsE
MIRFEQVSKAYLGGRQALQGVTFHLQQGEMAFLTGHSGAGKSTLLKLICGIERPSAGKILFSGHDISRLKSREVPFLRRQIGMIFQDHHLLMDRTVFDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDEALSEGILRLFEEFNRVGVTVLMATHDLGLISSRPYRVLTLSDGHMHGGHRGE
>NZ_CP024883.1|WP_015369318.1|1009702_1010758_-|cell-division-protein-FtsX
MNKRDAVNQIRQFGSKFDRLRNATGGGNGGRNAPKRPKAAPNPASRKSNVFNEQVRYAWHGALQDLKSTPLATFLTIMVIAISLTLPSVCYMVYKNVNSAASQYYPSPQITVYLEKTLDDDAAARVVGQLQAEQGVEKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAIVVPKLDFQNTDSLNTLRDRVSRIQGVDEVRMDDSWFARLASLTGLVGRVSAMIGVLMIAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFAGAFLSLILSEILVMRLSSAVTEVAKVFGTKFELSGLGFDECLLMLIVCSMIGWVAAWLATVQHLRHFTPD
>NZ_CP024883.1|WP_002920815.1|1008592_1009447_-|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLSADEERELAEKLHYQGDLEAAKKLILSHLRFVVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKTSNFADGIEDDNWEEQAANKLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>NZ_CP024883.1|WP_015369319.1|1007165_1008269_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MNMKGKALLAGCIALIMSGSALAEDIKIAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYKLILRTTGLDSDQGPTAAKYILGTVKPQRIAVVHDKQQYGEGLARSVQENLKKGGANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSEDPAEIAKYLKGAKVDTVMGPLSWDEKGDLKGFEFGVFTWHANGTATDAK
>NZ_CP024883.1|WP_015703711.1|1017602_1017848_-|sulfurtransferase-TusA
MSELFSSPDHTLDALGLRCPEPVMMVRKTVRTMPVGETLLIIADDPATTRDIPGFCLFMEHELVAQETEALPYRYLIRKSH
>NZ_CP024883.1|WP_015369309.1|1018055_1018721_+|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter
MNPFTTVQRKKALVWLSLFHLLVITSSNYLVQLPISIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMVPALIISYGISALFYMGEWQGFAALGTFNLFVARIAAASFMAYALGQILDVHVFNRLRQNRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDPFMAAHWGEIATVDYCFKVLISIVFFLPMYGVLLNMLLKKLADKSDLSALQPG
>NZ_CP024883.1|WP_015369308.1|1018794_1019352_+|DcrB-family-lipoprotein
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNTSGQAISLLDGKLSFTLPAGMADQSGKLGTQANNMHVYSDATGQKAVIVIVGDNTNEDLAVLSKRLEDQQRSRDPQLQVVSNKSIEIKGHTLQQLDSIISAKGQTAWSSVLLGKIDDKLLTLQVTLPADNQQQAQTEAESIVNTLVIN
>NZ_CP024883.1|WP_100279329.1|1019354_1020575_-|MFS-transporter
MPEPVAEPALNGLRLNLRIVSVVIFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLSYLLAAWSSSWPLLSLLLLCLGRAILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYSYIGLSGLAMVIMAVALVAIICALPRTVVKATKGKAMSFRAVLGRVWPYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRLGGLNVAMLCFSVEVIGLLLVGFAQTPLMAKVGTFLTGAGFSLVFPALGVVAVKAVPQHNQGSALATYTVFMDLSLGITGPLAGLLMAWTGIPTIYLAAAGLVMAALLLGWRLKKRPPVVEPEAAASGQ
>NZ_CP024883.1|WP_100279330.1|1020913_1021636_+|beta-ketoacyl-synthase-chain-length-factor
MNFTLNIIDWQARAPGLCEAEQWQQWSRDSHTIDPAAPAAKLNELPMMTARRLSSGSKLAVECGLAMLRRHEIDAVLYTSRHGELERNYRILHALAMEQAVSPTDFTLSVHNSAVGNLTIAAKKPIVSSSLSAGRDTFQQGLYEVMGLLQAGYQRVLMVDFDGFLPEFYHSQLPTAMPTWPYATAWVIESGGEWQCQAERYDAVPESPLPQSLLFLRHYLQNSRTFTLPGERVQWRWSRA
>NZ_CP024883.1|WP_100279331.1|1021632_1022448_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MTPLLQRLNRLWRAAMTGFCFALFGVGGLLLSLIWFNLLLIVVRDSTRRRRLARRSISASFRVFLNVVKAVGVLDYQIKGREILRQERGCLVVANHPSLIDYVMLASVMPETDCLVKSALLKNPFVSGVIRAADYLINDRADTLLPASRQRLQQGDTILIFPEGTRTVPGEKMQLQRGAANIAVRCGSDLRVVVIRCTEHMLGKRSKWYDPPRTKPLFTVEVGERLRIDQFYNANTQEPALAARQLNRHILLKLESGVAPETGINDGSALS
>NZ_CP024883.1|WP_015369304.1|1022428_1022686_+|acyl-carrier-protein
MEALYLEIKNLIISTLNLDELSADDIDTDAALFGDGLGLDSIDALELGLAVKKQYGVVLSAESEEMRQHFFSVATLASFIQAQRA
>NZ_CP024883.1|WP_015369303.1|1022697_1022949_+|acyl-carrier-protein
MTEQKAIYEEVSALLVKVFEIDPQDIKPEARLYEDLELDSIDAIDMIVHLQKKIGKKIKPEDFKTVRTVQDVVDAADRLLKEA
>NZ_CP024883.1|WP_015369302.1|1022955_1023537_+|hypothetical-protein
MSGIRSLPVVSIMTGLLLLTWPFLIWFGLAHNSLPWLLPLMALLLFLRFRQTRRQSGPLSVVTQIVAVAGMTLCIASYLLKTHQLLLFYPVVVSGVMLAVFGGSLWSSMPVVERLARLRDPVLSEQAVRYTRRVTQIWCAFFIGNGGIALVTALYGDMSLWTAWNGMISYLLMGMLMAGEWLVRQRVIKRDKP
>NZ_CP024883.1|WP_100279332.1|1023533_1024883_+|acyl-CoA-synthetase
MMQPLTLAQWLSAPRPPQTLIAWQEAHSWTLAHLRYDVAHLLNNLQQQPGERWALCFDNSYLFLVALLATLHAGKTPVLPGHSRAALLHEQRALFNGILSDKTLPWRGPLRVIQSAMATASHEYAFPAIGDNACIELFTSGSTGEPKRISKPVKSLDREAALIAAHYAGRLTGSRVVASVAPQHLYGLTFRLFLPMALGLPLHAAMIEYAEQLAALSHDHHYLFISSPAFLKRLDYRLTPPPVAMILSAGGKLPWQDAVHTANWFNTWPDEIYGSTESGVIACRQRLQDNAPWQPFPGIRFQPQGNTIRLFSPLIADDNGLVIDDILHFNESGQFQLAGRRDRVVKIEEKRISLSEVEYRLLQLDGILEAAVLPITRGSRQSVGALLVLDHDARRRWGKSQELQWRKALRASLEPVAIPRYWRVVDEIPVNSMNKRVYAQLQELFHEAP

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Crispr_ID: NZ_CP024883_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024883_2

4534154-4534284

Orphan

Consensus_repeat	Method
GCTGCGCAGGTTGATAAGCCTGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP024883_2

>merge|NZ_CP024883|2|4534154-4534284|CRISPRCasFinder
GCTGCGCAGGTTGATAAGCCTGCGGCTGCGGCGCTACCGGCTGATGGTGTACGGGCGGCTGCGCAGGTTGATAACCCTGCTGTGGCGCAGCTGCCGGTTGTTGATAATGCTGAGCCGGTTGCTGGGGCTGC

>NZ_CP024883|2|2|4534154-4534284|CRISPRCasFinder
GCTGCGCAGGTTGATAAGCCTGC	GGCTGCGGCGCTACCGGCTGATGGTGTACGGGCG
GCTGCGCAGGTTGATAACCCTGC	TGTGGCGCAGCTGCCGGTTGTTGATAAT
GCTGAGCCGGTTGCTGGGGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024883.1\|WP_015367493.1\|4543936_4546216_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP024883.1\|WP_015367486.1\|4531812_4532424_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP024883.1\|WP_015367494.1\|4546246_4546564_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP024883.1\|WP_015367495.1\|4546888_4547110_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP024883.1\|WP_015367489.1\|4537788_4538757_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP024883.1\|WP_045362336.1\|4524949_4525813_-\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|113736
NZ_CP024883.1\|WP_015367482.1\|4525814_4526432_-\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP024883.1\|WP_001040187.1\|4543466_4543685_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP024883.1\|WP_032707680.1\|4547178_4549125_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP024883.1\|WP_015704875.1\|4538871_4540638_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP024883.1\|WP_015367480.1\|4523527_4524676_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|179614
NZ_CP024883.1\|WP_015367478.1\|4520201_4522484_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP024883.1\|WP_015367483.1\|4526442_4528881_-\|dimethylsulfoxide-reductase-subunit-A	unknown	unknown	gnl\|CDD\|184952
NZ_CP024883.1\|WP_015367492.1\|4542402_4543107_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP024883.1\|WP_015367485.1\|4530460_4531804_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP024883.1\|WP_100279953.1\|4540638_4542360_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP024883.1\|WP_015367479.1\|4522675_4523416_+\|pyruvate-formate-lyase-1-activating-protein	unknown	unknown	gnl\|CDD\|182994
NZ_CP024883.1\|WP_015367484.1\|4529075_4530368_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP024883.1\|WP_000228469.1\|4536761_4537256_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP024883.1\|WP_015367477.1\|4519292_4520150_+\|formate-transporter-FocA	unknown	unknown	gnl\|CDD\|182746

Protein	Function_ID	Function_description	E-value
NZ_CP024883.1\|WP_015367493.1\|4543936_4546216_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP024883.1\|WP_015367486.1\|4531812_4532424_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.56232e-117
NZ_CP024883.1\|WP_015367494.1\|4546246_4546564_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	3.47571e-47
NZ_CP024883.1\|WP_015367495.1\|4546888_4547110_+\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	7.509e-48
NZ_CP024883.1\|WP_015367489.1\|4537788_4538757_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP024883.1\|WP_045362336.1\|4524949_4525813_-\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|113736	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC). The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).	6.92606e-105
NZ_CP024883.1\|WP_015367482.1\|4525814_4526432_-\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.28573e-91
NZ_CP024883.1\|WP_001040187.1\|4543466_4543685_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP024883.1\|WP_032707680.1\|4547178_4549125_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP024883.1\|WP_015704875.1\|4538871_4540638_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP024883.1\|WP_015367480.1\|4523527_4524676_-\|MFS-transporter	gnl\|CDD\|179614	PRK03633, PRK03633, putative MFS family transporter protein; Provisional.	0
NZ_CP024883.1\|WP_015367478.1\|4520201_4522484_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP024883.1\|WP_015367483.1\|4526442_4528881_-\|dimethylsulfoxide-reductase-subunit-A	gnl\|CDD\|184952	PRK14990, PRK14990, anaerobic dimethyl sulfoxide reductase subunit A; Provisional.	0
NZ_CP024883.1\|WP_015367492.1\|4542402_4543107_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.25453e-138
NZ_CP024883.1\|WP_015367485.1\|4530460_4531804_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP024883.1\|WP_100279953.1\|4540638_4542360_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP024883.1\|WP_015367479.1\|4522675_4523416_+\|pyruvate-formate-lyase-1-activating-protein	gnl\|CDD\|182994	PRK11145, pflA, pyruvate formate lyase 1-activating protein.	0
NZ_CP024883.1\|WP_015367484.1\|4529075_4530368_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP024883.1\|WP_000228469.1\|4536761_4537256_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	1.61477e-117
NZ_CP024883.1\|WP_015367477.1\|4519292_4520150_+\|formate-transporter-FocA	gnl\|CDD\|182746	PRK10805, PRK10805, formate transporter; Provisional.	0

>NZ_CP024883.1|WP_015367486.1|4531812_4532424_-|outer-membrane-lipoprotein-chaperone-LolA
MKKLAITCALLSGFVVSQVWADAAGDLKSRLDKVSSFHASFTQKVTDASGNAVQDGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKNATSNTPFMLIARNQSADWQQYNIKQNGDDFVLTPKSGNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDASKFTFTPPQGVTVDDQRK
>NZ_CP024883.1|WP_015367485.1|4530460_4531804_-|replication-associated-recombination-protein-A
MSNFSLDFSDNAFQPLAARMRPENLAQYIGQQHLLAPGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIEQVLNQAMSDKARGYGGQDIILPDETRKAIAELVNGDARRALNTLEMMADMAENDDSGKRVLKAELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARDRPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEQYFPQEMAQTRYYQPTNRGLEGKIAEKLAWLAELDQNSQIKRYR
>NZ_CP024883.1|WP_015367484.1|4529075_4530368_-|serine--tRNA-ligase
MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDENDNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCSGDMGFSACKTYDLEVWVPAQDTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVLRPYMRGLEYIG
>NZ_CP024883.1|WP_015367483.1|4526442_4528881_-|dimethylsulfoxide-reductase-subunit-A
MKIKAPDALLAAEVSRRGLMKTTAIGGLAMASNALTLPFTRIAHAADTLAPVSEKVVWSACTVNCGSRCPLRMHVVDGAIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGKRGEGKFEQISWEEAFDTIASNMQRLIKDYGNESIYLNYGTGTLGGTLTRSWPPGKTLIARLMNCCGGYLNHYGDYSSAQIAAGLNYTYGGWADGNSPSDIENSQLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALISALAWVMITENLVDQPFLDKYCVGYDEKTLPADAPANGHYKAYILGQGSDGIAKTPEWASTITGIPRERIVKLAREIATAKPAYISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFERMPTLENPVETSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEMIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFADQAIKPRFECKTIYEMTTELAKRMGVAEKFTEGRTQEGWMRYLYEQSRKAIPELPDFDTFRQQGIFKQRDPQGHHVAYKAFRDDPQANPLTTPSGKIEIYSQELAKIAATWELPEGDVIDPLPIYTPGFENYNDPLTAKYPLQLTGFHYKSRVHSTYGNVDVLQAACRQEMWINPIDAKTRGIVNGDRIRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYNPDASRVDQAGSINVLTTQRPSPLAKGNPSHTNLVQVEKL
>NZ_CP024883.1|WP_015367482.1|4525814_4526432_-|dimethylsulfoxide-reductase-subunit-B
MTTQYGFFIDSARCTGCKTCELACKDYKNLTPDVSFRRIYEYAGGDWQEDNGVWNQNVFAYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAAKGHMTKCDGCHERVAQGKKPICVESCPLRALDFGPIAELREKHGQLAAVAPLPSAHFTRPSIVIKPNANSRPCGDTTGYLANPKEV
>NZ_CP024883.1|WP_045362336.1|4524949_4525813_-|dimethyl-sulfoxide-reductase-anchor-subunit
MGNGWHEWPLMIFTVFGQCVAGGFIVLALALMKGELSREQQRQVIMSMFGLWVLMGIGFIASTMHLGSPMRAFNSLNRVGASSLSNEIASGALFFAVGGIGWLLAVVNKLPSGLRNLWLVVTMILGVIFVWMMIRVYNTIDTVPTWYTIWTPLNFFLTLFIGGPLLGYLLLRVAGVDGWAMRLLPVIMLVALVISVTVALIQGSELATIHSSIQQASALVPNYGSLMAWRTVALVLALVCWIVPQLKGYQPALPLLGLAFVLVLVGEMIGRGVFYGLHMTVGMAIAS
>NZ_CP024883.1|WP_015367480.1|4523527_4524676_-|MFS-transporter
MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLVGTLFAGWVIKRLGFNRSYYLASLIFAVGCVGLGITLGFWTWLSWRFIAGVGCAMIWVVVESALVCSGTSRSRGRLLAAYMMVYYIGTVLGQLMVSKLPTDLMSVLPWVTGLALAAILPLMFTRIMSQADEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFWMAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGFTLYPVAMAWACEKVEHHQLVAMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASVSFIYLLTLLRKAGHHPTPVAHA
>NZ_CP024883.1|WP_015367479.1|4522675_4523416_+|pyruvate-formate-lyase-1-activating-protein
MSTIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEITVEELMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAQYLSKKGINVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVHPPKKETMERVKGILEQYGHKVMY
>NZ_CP024883.1|WP_015367478.1|4520201_4522484_+|formate-C-acetyltransferase
MSELNEKLATAWEGFAKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATDATTKLWDSVMEGVKQENRTHAPVDFDTSLASTITSHDAGYIEKALEKIVGLQTEAPLKRAIIPFGGIKMVEGSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDFLMKDKFAQFNSLQAKLESGEDLEATIRLREEIAEQHRALGQIKEMAAKYGYDISGPATTAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSSFLDIYIERDLQAGKITEQDAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGVDGRTLVTKNSFRFLNTLYTMGPSPEPNITILWSEKLPLSFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNFDEVMERMDHFMDWLAKQYVTALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAVDFEIEGEYPQFGNNDARVDDMAVDLVERFMKKIQKLHTYRNAIPTQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQTM
>NZ_CP024883.1|WP_015367477.1|4519292_4520150_+|formate-transporter-FocA
MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTAAMPFGIAKLIGGVCFSLGLILCVICGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYVGNLIGALLFVLLMWLSGEYMTANGGWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAMIMVLPVAMFVASGFEHSIANMFMIPMGIVIRNFASPEFWTAIGSTPESFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGDDHH
>NZ_CP024883.1|WP_000228469.1|4536761_4537256_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP024883.1|WP_015367489.1|4537788_4538757_+|thioredoxin-disulfide-reductase
MGTAKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHISSVDLQNRPFRLVGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIAAEVHLIHRRDTFRAEKILIKRLMDKVESGNIVLHTDRTLEEVTGDQMGVSGLRLRDTKNSDNVETLDVAGLFVAIGHSPNTAIFEGQLALENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADACK
>NZ_CP024883.1|WP_015704875.1|4538871_4540638_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKTRQQELTRWLKEKSIISRRWLMISRLLGVVSGLLIVAQAWFLARILHRMIMENIPATALLLPFTLLALVLILRAWVVWLRERVGFHAGQHIRYEIRRQVLDRLQQAGPAWIQGKPAGSWATLILEQIDDMHDYYARYLPQMTLAACVPLLIVITIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALGRLSGHFLDRLRGMETLRLFNRGEAEINNIRDASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELDFGHYGVGVTLMSGFLTLILAPEFFQPLRDLGTFYHAKAQAIGAADSLKTFMETPLAQAERGEKTLSDHELIRLEARDLMVKSPDGKTLAGPLSFTLNAGERVVLVGQSGSGKSSLLNTLTGFLPYEGSLQVNGVELRDLDAERWRRLISWVGQNPQLPAATLRENVLLAWPEATEAQLQLALDKAWVSEFISQLPQGINTPLGDQAGGLSVGQAQRIAVARALLVPCRLLLLDEPAASLDAHSEQRVMQALSNASTQQTTLMVTHQLAGLAEWDAIWVMQNGQIVEQGGYAQLSAAGGAFASLLAHRQEEI
>NZ_CP024883.1|WP_100279953.1|4540638_4542360_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWLLTLGVVLAIVTLLASIGLLTLSGWFLSTSAVVGVAGIYSFNYMLPAAGVRGAAIIRTAGRYFERLVSHDATFRVLQHLRVATFSKLLPLSPAGLARFRQGELLNRIVADVDTLDHLYLRVISPLVGALVVILVVTIGLSVLDVTLALTLGGIMLATLLLLPPLFYRAGKPTGEQITQLRGQYRQQLTSWLQGQAELMLFNASDRYRKQMEKTEQRWQEAQRRQAELTALSQALMLLIGGIAVIAMLWMASEGVGGNSQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASARRITQITEQQPEVTFSQQAPQSFSQVALTLNEVTFSYPQQSAPALKDISLQVAAGEHIAILGRTGCGKSTLLQLLTRAWDPANGQIQLNGQPLSELSETTLRQAMSVVPQRVHLFSATLRDNLLLAAPQVSDARLADILARVGLEKLLEDSGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLSEVMRDKTVLMVTHRLRGLARFNQIIVMDNGQIIEQGSHAELLAKQGRYYQFKQRL
>NZ_CP024883.1|WP_015367492.1|4542402_4543107_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRDSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPEQFHYSRSMKRFHQRSPYRVTLNHAFGQVIEGCASHRDEGTWITHGIVQAYHQLHELGHAHSIEVWDEDRLVGGMYGVAQGALFCGESMFSRAENASKTALMIFCQAFAQGGGRLIDCQVLNAHTASLGAIEIPRRDYLDYLSVLRTYRLPERFWVPRVLFTGNG
>NZ_CP024883.1|WP_001040187.1|4543466_4543685_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP024883.1|WP_015367493.1|4543936_4546216_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPATEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQPSENNASQPGNEEQAGGEDRMENFTTNLNQLARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDVTEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSRSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLAKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIQQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTTVIHQVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVELDKANNVLTYGFHSAQKHKPEAAH
>NZ_CP024883.1|WP_015367494.1|4546246_4546564_-|ATP-dependent-Clp-protease-adapter-ClpS
MSKRDWLDFDQLVEDEVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYEGKAICGVFTAEVAETKVAMVNQYAKENEHPLLCTLEKA
>NZ_CP024883.1|WP_015367495.1|4546888_4547110_+|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPVEAETAA
>NZ_CP024883.1|WP_032707680.1|4547178_4549125_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELRDIRRSYPSGDGEIDVLKGITLSIAAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYQVAGVDVAHLSGDELARLRREHFGFIFQRYHLLSHLTAAQNVEVPAIYAGKERRIRLERARDLLTRLGLGERAEYFPSQLSGGQQQRVSIARALMNGGEVILADEPTGALDSRSGEEVMAILHQLKAQGHTVIIVTHDPQVAAQAERIIELRDGEIVRNPPPSSPEKGGVLRAEARAEPSVWRQFSSGFREALVMAWRAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDDPRYQQALKYDDLLAIQKQPWVSSATPAVSKSLRLRANNIDVAASAEGVGAQYFNVYGMTFSEGNTFNELQLNSRAQVVVLDSNARRQLFPHKAKVVGEVILVGNMPATIVGVADEKQSMFGSSKILRVWLPYSTMAGRVMGQSWLNSITVRVQEGYDSATAEQQLVRLLELRHGKKDVFTWNMDSVLKTAERTTHTLQLFLTLVAVIALVVGGIGVMNIMLVSVTERTREIGIRMAVGARARDVLQQFLIEAVLVCLVGGAIGVSLSLMIAFILQLFLPGWEIGFSPLALLTAFLCSTLTGVLFGWLPARNAARLDPVDALARE

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Crispr_ID: NZ_CP024883_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024883_3

4636518-4636591

Orphan

Consensus_repeat	Method
CGGGTAAGGCGTTAGCCGCCACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024883_3

>merge|NZ_CP024883|3|4636518-4636591|CRISPRCasFinder
CGGGTAAGGCGTTAGCCGCCACCCGACAAAAAACGGCACCGCGGGTAGCCCGGGTAAGGCGTAGCCGCCACCCG

>NZ_CP024883|3|3|4636518-4636591|CRISPRCasFinder
CGGGTAAGGCGTTAGCCGCCACCCG	ACAAAAAACGGCACCGCGGGTAGC
CCGGGTAAGGCGTAGCCGCCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024883.1\|WP_042895107.1\|4625282_4626182_+\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163
NZ_CP024883.1\|WP_015704832.1\|4629723_4630989_+\|DUF1479-domain-containing-protein	unknown	unknown	gnl\|CDD\|369327
NZ_CP024883.1\|WP_015367575.1\|4645585_4645711_+\|manganase-accumulation-protein-MntS	unknown	unknown	gnl\|CDD\|380222
NZ_CP024883.1\|WP_047075760.1\|4642674_4643715_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381317
NZ_CP024883.1\|WP_020079297.1\|4630985_4632059_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP024883.1\|WP_100279976.1\|4640365_4641082_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP024883.1\|WP_045374148.1\|4632355_4633657_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP024883.1\|WP_100279973.1\|4626185_4628618_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	unknown	unknown	gnl\|CDD\|273798
NZ_CP024883.1\|WP_100279975.1\|4638378_4639161_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP024883.1\|WP_063443644.1\|4624371_4625127_+\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180204
NZ_CP024883.1\|WP_100279977.1\|4641142_4642519_-\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP024883.1\|WP_100279972.1\|4623136_4624372_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|182643
NZ_CP024883.1\|WP_100279971.1\|4622015_4622957_-\|beta-aspartyl-peptidase	unknown	unknown	gnl\|CDD\|182319
NZ_CP024883.1\|WP_015367569.1\|4639359_4640274_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|182341
NZ_CP024883.1\|WP_015367574.1\|4644931_4645399_-\|manganese-binding-transcriptional-regulator-MntR	unknown	unknown	gnl\|CDD\|182927
NZ_CP024883.1\|WP_015367573.1\|4643822_4644935_-\|anion-transporter	unknown	unknown	gnl\|CDD\|238537
NZ_CP024883.1\|WP_015367567.1\|4636606_4638199_-\|ABC-F-family-ATPase	unknown	unknown	gnl\|CDD\|237894
NZ_CP024883.1\|WP_100279974.1\|4633672_4636036_+\|glycoside-hydrolase-family-31-protein	unknown	unknown	gnl\|CDD\|224418
NZ_CP024883.1\|WP_015367562.1\|4628768_4629584_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|272905
NZ_CP024883.1\|WP_100279978.1\|4645979_4647557_+\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|225105

Protein	Function_ID	Function_description	E-value
NZ_CP024883.1\|WP_042895107.1\|4625282_4626182_+\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	1.89076e-138
NZ_CP024883.1\|WP_015704832.1\|4629723_4630989_+\|DUF1479-domain-containing-protein	gnl\|CDD\|369327	pfam07350, DUF1479, Protein of unknown function (DUF1479). This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.	0
NZ_CP024883.1\|WP_015367575.1\|4645585_4645711_+\|manganase-accumulation-protein-MntS	gnl\|CDD\|380222	NF033226, small_MntS, manganase accumulation protein MntS. Members of this family are MntS, a small protein of about 42 amino acids that seems to play assist bacteria in accumulating manganese when iron is limiting. It may function as a manganese chaperone, or may inhibit manganese efflux transporters.	8.63856e-23
NZ_CP024883.1\|WP_047075760.1\|4642674_4643715_-\|aldo/keto-reductase	gnl\|CDD\|381317	cd19091, AKR_PsAKR, Polaromonas Sp. aldo-keto reductase and similar proteins. The prototype of this family is an uncharacterized aldo-keto reductase from Polaromonas sp.	0
NZ_CP024883.1\|WP_020079297.1\|4630985_4632059_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	8.79663e-60
NZ_CP024883.1\|WP_100279976.1\|4640365_4641082_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.42691e-61
NZ_CP024883.1\|WP_045374148.1\|4632355_4633657_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.0283e-74
NZ_CP024883.1\|WP_100279973.1\|4626185_4628618_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	gnl\|CDD\|273798	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family. This family previously was designated pyruvate formate-lyase, but it now appears that members include the B12-independent glycerol dehydratase. Therefore, the functional definition of the family is being broadened. This family includes the PflF and PflD proteins of E. coli, described as isoforms of pyruvate-formate lyase found in a limited number additional species. PFL catalyzes the reaction pyruvate + CoA -> acetyl-CoA + formate, which is a step in the fermentation of glucose.	0
NZ_CP024883.1\|WP_100279975.1\|4638378_4639161_+\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	5.46173e-72
NZ_CP024883.1\|WP_063443644.1\|4624371_4625127_+\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180204	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional.	0
NZ_CP024883.1\|WP_100279977.1\|4641142_4642519_-\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	3.99793e-157
NZ_CP024883.1\|WP_100279972.1\|4623136_4624372_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|182643	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional.	0
NZ_CP024883.1\|WP_100279971.1\|4622015_4622957_-\|beta-aspartyl-peptidase	gnl\|CDD\|182319	PRK10226, PRK10226, isoaspartyl peptidase; Provisional.	0
NZ_CP024883.1\|WP_015367569.1\|4639359_4640274_+\|L,D-transpeptidase	gnl\|CDD\|182341	PRK10260, PRK10260, L,D-transpeptidase; Provisional.	0
NZ_CP024883.1\|WP_015367574.1\|4644931_4645399_-\|manganese-binding-transcriptional-regulator-MntR	gnl\|CDD\|182927	PRK11050, PRK11050, manganese-binding transcriptional regulator MntR.	4.05373e-90
NZ_CP024883.1\|WP_015367573.1\|4643822_4644935_-\|anion-transporter	gnl\|CDD\|238537	cd01117, YbiR_permease, Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.	2.3497e-91
NZ_CP024883.1\|WP_015367567.1\|4636606_4638199_-\|ABC-F-family-ATPase	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP024883.1\|WP_100279974.1\|4633672_4636036_+\|glycoside-hydrolase-family-31-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
NZ_CP024883.1\|WP_015367562.1\|4628768_4629584_+\|HAD-family-hydrolase	gnl\|CDD\|272905	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. [Unknown function, Enzymes of unknown specificity].	3.62148e-67
NZ_CP024883.1\|WP_100279978.1\|4645979_4647557_+\|phosphoethanolamine-transferase	gnl\|CDD\|225105	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	1.81769e-110

>NZ_CP024883.1|WP_100279974.1|4633672_4636036_+|glycoside-hydrolase-family-31-protein
MKTLKHWSLHQQLEHHVELTVDGQHTLCLYVLEENLFRVLLKRQGQLALDRTWSIAPQQDVPWEGRARDDLSGFSLPAWQMSEADDTLTIATRQLRVTVHQPLWLEWSYRDEAGEWQTLANDRPTSAYLANAHGDGVAHYLSRRKDERFYGLGEKAGDLQRNGKRYEMRNLDAMGYNAVSTDPLYKHIPFTITQRSDISYGLFYDNLSSCWLDLGNEIDNYHTAYRRWQAEAGDIDYYLFTGKQVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHYTDAPDAQNQLMNFIRLCEQHAIPCDSFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSRSFHDAGLKLAANIKPCLLQDHPRYGEVAERGLFIRDSQTDSPERSSFWDDEGSHLDFTNPHTVTWWQEGVTTQLLEMGIDSTWNDNNEYEVWDGEARCYGFGREIAIKHIRPVMPLLMMRASLEAQQRFAPQKRPYLISRSGCAGMQRYVQTWSGDNRTNWDTLRYNTRMGLGMSLSGLFNVGHDVGGFSGDKPEPELFVRWVQNGVMHPRFTIHSWNDDQTVNEPWMYPEITPAIRSAIELRYRLLPYLYTLLWQAHADDEPMLRPTFLDHQHDTQTFAECDDFMLGRDLLVASVVEPGARQRQLWLPDNQDGWYDFYSHQWFAGGQWVTLDAPLEKLPLLVRAGAGLPLSERISHVDAQKDDRRELQLFPLKGTGSTRGLLFEDDGESWGYKEGDALWLEWEMTCSASSINLKINARGNYSPAWKALKLSLPAGEKRQLLVNGVEGTEWRL
>NZ_CP024883.1|WP_045374148.1|4632355_4633657_+|MFS-transporter
MSQGLNNDMAVSKTRRVVKNLRWWVLVLFLLGVTVNYITRNSLGIIAPELKATLGITTEQYSWIVGAFQLAYTIFQPLCGWLIDVIGLKLGFMVCATLWAVACIAHAGAGSWLHLAILRFFMGGAEAAATPANAKTIGEWFPKSERPIAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGAFMFTGVLALLWVVLWWAFYQSPEKHPNLSQSELEYIKQDNEAPPVKLPFFTALKTVSKNKRFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVVSGYLTRLYVRWFGCTRVNSVIASSVTGAFLMISLALVAITRDPYITIILISIGGFGHQIISCMLSALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLIGAVFLVAFIAERRAKRA
>NZ_CP024883.1|WP_020079297.1|4630985_4632059_-|LacI-family-transcriptional-regulator
MDKKLRVAEIAARTGLSASTVSRVLAGKANTSEKARQAVLACARELGVMQGLAAGRLLLNNLLIFAPQRAFDERSDIFYYRVIQSINNALAPHEVRLRYCALEENDSDANLFLARMNETDTQAAVLLGIDDRHIHALAADLGKPCVLINCRDEGMRLPSIAPDHRLIGQCAARYLFDMGHQAVMNVMCLRRYTMELRLVGIKEAWRARNLRFTGSRDLISVANFSARETEEQVGAWLDALQGRPMPTAFLVGGDFMAAGTVSALQKRGLRVPQDVSVMSIDGFNLAAIQDVPLTAIHVPRDELGSEAVHLLQQRLLRPEAPHGSLLLHGALVVRDSVRRIRPGKSHTAVEQQGLYDD
>NZ_CP024883.1|WP_015704832.1|4629723_4630989_+|DUF1479-domain-containing-protein
MAALPTHETLPADHKAAIRQMKQALRAQIGDVQAVFDKLSARISERLDEINALKAAGQEVWPTIPFSDIAQGKVSDAQREAIKRRGCAVIKGHYPREQALAWDNAMLEYLDLNHFDDVYKGPGDSFFGSLEASRPEIYPIYWSPSQMQARQSDEMAAVQSFLNRLWRFEQDGKRWFDPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFANVFNGNIDAYDPWDAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMIPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGKVLPISEQWHPLLIKALSSIPALNAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAQKVKIALEKGASPGDFPREDYECDWQARFTVADLNDHGKRALGMKI
>NZ_CP024883.1|WP_015367562.1|4628768_4629584_+|HAD-family-hydrolase
MTVKVIVTDMDGTFLNDAKQYDRPRFLAQFAQLKQQGIEFVVASGNQYYQLISFFPEIREQISFVAENGALVYEHGKQVFHGELTRHESQVVIGELLKDPQLNFVACGLQSAYVSDKAPDAFVELMSKHYHRLQRVSDYHRIDDTLFKFSLNLPDSDIPQLIDKLHVSLDGIMKPVTSGFGFVDLIIPGLHKANGISRLLKRWNLSPQQCVAIGDSGNDAEMLKLVKYAFAMANAADSIKAIAGFTTDDNNHDGALKVIQAVLDKTSPFND
>NZ_CP024883.1|WP_100279973.1|4626185_4628618_+|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme
MTTLKLDTLSARIQAHKMALVHIVKPPVCTERAQHYTAAYQQHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLAAVSEHCKRFATLARDMAAQEPRELRRDELLAIAENCEIIAHQPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHCCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQVFLAQQHALSKGNFTNFDQVLEDWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGVIGQQELAKALAEDFAGLTHEQLRQRLINGAPKYGNDDDSVDILLARAYQTYIDELKQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHAPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGGVLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQDDIIARTEHTL
>NZ_CP024883.1|WP_042895107.1|4625282_4626182_+|glycyl-radical-enzyme-activating-protein
MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARSEDLLYDARLCLDGCELCQQAAPEVITRTLDGLIIHRQNVNDSHIAALRHCCPTTALTVCGEEKSVTEIMATVLRDKPFYDRSGGGITLSGGEPFMNPALAQALFEASHQAGIHTAVETCLHVPWKYIEPSLPFVDLFLADLKHVDEAVFQQWTDGSARRVLDNLQRLAQAGKKIIIRVPLIQGFNASEADITAITDFAADRLQVSEIHFLPYHTLGMNKYQLLSQPYTAPDKPLAAPELLAFAQQYAQSKGLTATLRG
>NZ_CP024883.1|WP_063443644.1|4624371_4625127_+|molybdopterin-synthase-adenylyltransferase-MoeB
MAVELSDEEMLRYNRQIVLRGFDFDGQERLKAARVLVVGLGGLGCAAAQYLAAAGVGQLTLVDFDTVSLSNLQRQTLHSDATIGQPKVDSARDALARINPHVRLVTIDAMLDDAALATQIADHHLVLDCTDNVAIRNQLNAGCFQHKTPLISGAAIRMEGQISVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLVGTIGSLQAMEAIKLLTGYGAPARGKIVMYDAMTCQFREMKLMRHPQCEVCGSR
>NZ_CP024883.1|WP_100279972.1|4623136_4624372_+|molybdopterin-molybdotransferase-MoeA
MDFTAGLMPLDTALTQMLDRISPLQATETLPLLQAFSRVTAHDVVSPLDVPGFDNSAMDGYAVRLADLTDGASLPVAGKAFAGQPFHDAWPAGTCIRIMTGAPVPEGCDAVVMQEETEQTDAGVRFTAPVKAGQNIRRRGEDIANGAVVFPAGTRLTVAELPVLASLGIADVEVVRKVRVAVFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIPDDPAKLRDAFIAADQQADVVISSGGVSVGEADYTKTILEELGEIGFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNRGQTQPMRLRVRAASRLKKSPGRLDFQRGVLQRNPEGELVVSTTGHQGSHIFSSFSLGNCFIVLERERGNVEAGEWVEVEPFNHLFGGL
>NZ_CP024883.1|WP_100279971.1|4622015_4622957_-|beta-aspartyl-peptidase
MGKAVIAIHGGAGAISRAQMTQAREREYVAALSAIVDSGQKMLAAGASALDAVTEAVRLLEECPLFNAGIGSVFTHDQTHELDACVMDGYSLQAGAVAGVKHLRNPVLAARLVLEESPHVLLIGEGAEKFASSRGMALVENELFSTTERLLQLQQAKEGGEIILDHHAAPLDERHKMGTVGAVALDLAGNLAAATSTGGMTNKLPGRVGDSPVPGAGCYANNASVAVSCTGTGEVFIRTLAAYDISALMEYGNLSLFEACERVVQEKLPALGGSGGLIAIDREGNVVLPFNSEGMYRAWCYAGDTPTIGIYRE
>NZ_CP024883.1|WP_015367567.1|4636606_4638199_-|ABC-F-family-ATPase
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIADLQAFVSRFSANASKSRQATSRARQIDKIKLDEVKASSRQNPFIRFEQDKKLFRNALEVEALAKGFDNGPLFKGVNLLLEVGEKLAVLGTNGVGKSTMLKTLVGELEADNGTVKWSENARIGYYAQDHAEDFENDLTVFDWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTLIFVSHDREFVSSLATRVLEITPERVIDFSGNYEDYLRSKGIE
>NZ_CP024883.1|WP_100279975.1|4638378_4639161_+|tyrosine-protein-phosphatase
MTTRTSHPAFISLQGGINFRDLGGQRAADGRRVRSGKLLRSGSLHNMTPEDLNHLSAIPLSRVLDYRDPTEVNRSPDRLNSEAFYLNAPANPLSSNVNAKVTEFNAATLNTMDGEQFMLQLYRQLPFDNAAYRQLTQWLMEPFDGALLQHCAVGKDRTGVGCALTLFALGCDSNTVMEEYLLTQGMLAQVEGFLLDTFGEGLNEHGRKNLAAIMTVQESYLATALSSIEQHYGHVDRWLEQEYRLTPQAREALQSRLLED
>NZ_CP024883.1|WP_015367569.1|4639359_4640274_+|L,D-transpeptidase
MKLSTLLAAAFAIVGFCNTASAVTYPLPTDGSRLIGQNQVITIPDDNKQPLEYFAAKYQMGLSNMLEANPGVDTYLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYAAEGNPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFENVPVGTRVQFIDEPVKATTEPDGSRYVEVHNPLSTTEAQFKGGEIVPISLTQAVQSVTSQPDVDQSVMDQAIQNRSGMPVRLN
>NZ_CP024883.1|WP_100279976.1|4640365_4641082_-|GntR-family-transcriptional-regulator
MTAKYLNIAREIKKRIISQQYPASAPLPDQFALAAEFNTSRMTIQQAMRQLIVEGLIYTRKGQGTFVRKNFLQLSQWELPGSDYFGATKTWEHLGEVQSEVVRFELRFPSEKEQSSLLIDADAPVYDFVRLRLLNGEPISLDLTVMPVVLVPGLNKSHLQSSVFRYVQEALGLKLMGSYRVVRAMKPDELDKLHLNCEPTDPVLEVEQVIYLEDGTPLEYAHCHYRYDHGGVILVNNG
>NZ_CP024883.1|WP_100279977.1|4641142_4642519_-|glycoside-hydrolase-family-1-protein
MKDKLPANFLWGNSVSSMQTEGAWNEGGKGMSVYDIREPSEFASDWKVATDSYHRFREDFDLMQDLGMNCYRFQIAWSRVCPQGDGEFNEEGIAFYHQFIDELIARGIEPMICLYHFDMPLSLAERYNGFTDRRVMDAFIRYGQKMIDCYGDKVKYWLTFNEQNLYHSPEAFLITGYLRGDKTLRELYQIQHHVMMAHVHLTDYLHQAKPQCLMGGMLAHALVYPATCKPRDILCAQQLDEFLNQNLLRAYAGEGYSPEVMHFVAHEGFDDIYRPEDIALMARVKVDYLAFSYYASRTLNSDAIPPGTAVNNYMLFGNQDNPYLKATEWNWQIDPLGFRTIITRYYNDWRLPVFPIENGIGVIESWDGENQVADDYRIAYHRDHINAMKAAMFEDGAQVIGYLGWGLIDILSSQGDMRKRYGVVYVNRENHDLKDLKRVPKKSYAWLKRVIHSNGEEM
>NZ_CP024883.1|WP_047075760.1|4642674_4643715_-|aldo/keto-reductase
MRYQKLGNTGLFVSELCLGTMTFGGEEGMWGKIGQLRQAEAEQLVGSALDAGINFIDTANVYSEGRSEEITGQALKNLKIPRENVVVATKVFGETGTAGVNSRGSSRYHIMGSVKESLRRLQLDHIDLYQLHGFDPATPIEETLSALDTLVQQGHVRYIGVSNWAAWQIAKALGIAERLGLSRFASLQAYYTIAGRELERELVPMMQSEGLGLMVWSPLAGGLLSGKYRRDGQAEAGGRRLEFDFPPVNKDRAFDCIDVMQVIAEAKGVSVAQIALAWLLHQPAVTSVIIGAKRAEQLQDNIAATAIRLSEDELRQLDAVSALPREYPGWMLERQGEYRRKQLDAE
>NZ_CP024883.1|WP_015367573.1|4643822_4644935_-|anion-transporter
MNLPFVQSLARDRFLHLLLLIAVILSLFVPFAPQRWGQAIDWHTIITLSGLMLLTKGIELSGYFDVLGRKMARRFVTERQLAIFMVLAAALLSTFLTNDVALFIVVPLTLTLKKWCAIPVNRLIIFEALAVNAGSLLTPIGNPQNILLWGRSGLSFLAFIGQMLPLAAAMMITLLVLCWFCFPAARLNYQSSDKAPEWRPQLVWSCLAFYLIFLAALEMKQELWGLALIAVGFLLLARAVIINVDWSLLLVFMAMFIDVHLLTQLPVLQQWLNDVGQLSHGGLWLTAIGLSQFISNVPSTILLLNYVPPTMLLAWAVNVGGFGLLPGSLANLIALRMAGDRRIWWRFHLYSIPLLIWAALTGYAMLALWR
>NZ_CP024883.1|WP_015367574.1|4644931_4645399_-|manganese-binding-transcriptional-regulator-MntR
MNRRAGKPITKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLINEVGEARQVDMAARLGVSQPTVAKMLKRLASVGLIEQIPWRGIFLTPEGEKLAHESRERHQIVENFLLAIGVSPEIARRDAEGMEHHVSEETLAQFKLFTQRLHAE
>NZ_CP024883.1|WP_015367575.1|4645585_4645711_+|manganase-accumulation-protein-MntS
MNEFKRCLNVFSHSPFKVRLMLIGMLCDMINGKPQQDKPNH
>NZ_CP024883.1|WP_100279978.1|4645979_4647557_+|phosphoethanolamine-transferase
MNVTLKETLAARRLALNPWTGFYFLQSLLINLALGYEFSLLYTVAFTCVLHLLWRTFPRVQKGVVGLYSLLAAMYYPFGQAYGAPNFNTLLALHATNVEESTEILTIFPWYNYLLAVFIFALGVIAVRRKPQPPARLGKVEYLGLLFSIGIFFLQPVQNLAWGGVFKVIDSGYPAVRFVKDVIVNNNEVLDEQARMAQLANMKDSWHVLAVKPKYHLYVVVIGESARRDALGAFGGHWGNTPFASSVNGYLFKNYVAASGSTQKSLGLTLNRVVDGKPQYQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVQFLKNGDFEANKNTQDEQLLKLTEQVLSVERSQPQLIVLHIMGSHPQACDRTKGKYTTFVQSKETSCYLYSVTQTDALLAKLYGQLQNSGSSFSLTYFSDHGLAFKERGKAVQYLAHDDKYQQNFQVPFMVLSSDDKAHKMIKARRSANDFLSFFSQWTGISAQEITPRYRFISEQKAGPVYITNFQLQKVDYNHLGSDEFTVN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	NZ_CP024883.1	598321-598344	1	0.958
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	NZ_CP024883.1	962892-962915	1	0.958

1. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to position: 598321-598344, mismatch: 1, identity: 0.958

acaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaacgacaccgcgggtagc	Protospacer
**********.*************

2. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to position: 962892-962915, mismatch: 1, identity: 0.958

acaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaacggtaccgcgggtagc	Protospacer
***********.************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024883_2	2.2\|4534234\|28\|NZ_CP024883\|CRISPRCasFinder	4534234-4534261	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	238670-238697	1	0.964
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	323589-323612	1	0.958
NZ_CP024883_2	2.1\|4534177\|34\|NZ_CP024883\|CRISPRCasFinder	4534177-4534210	34	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	238613-238646	2	0.941
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	324019-324042	2	0.917
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447690-447713	2	0.917
NZ_CP024883_3	3.1\|4636543\|24\|NZ_CP024883\|CRISPRCasFinder	4636543-4636566	24	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447529-447552	3	0.875
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	563853-563895	5	0.884
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	CP052389	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1	227977-228019	6	0.86
NZ_CP024883_2	2.2\|4534234\|28\|NZ_CP024883\|CRISPRCasFinder	4534234-4534261	28	NZ_KM406416	Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence	3293-3320	6	0.786
NZ_CP024883_2	2.2\|4534234\|28\|NZ_CP024883\|CRISPRCasFinder	4534234-4534261	28	NZ_MF788070	Raoultella ornithinolytica strain 23141 plasmid p23141-2, complete sequence	59889-59916	6	0.786
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	CP045556	Citrobacter sp. S39 plasmid pS39-1, complete sequence	107017-107059	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP045203	Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence	229891-229933	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP022152	Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence	64018-64060	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP019987	Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence	124384-124426	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP030224	Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence	86439-86481	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP026213	Citrobacter sp. CFNIH10 plasmid pKPC-933d, complete sequence	51092-51134	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_MG387191	Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence	109934-109976	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP048383	Citrobacter freundii strain 62 plasmid p6_A, complete sequence	126989-127031	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	172775-172817	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	583085-583127	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP042535	Citrobacter freundii strain E51 plasmid pE51_001, complete sequence	112057-112099	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP007734	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence	179872-179914	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP026058	Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence	283646-283688	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	290608-290650	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	411263-411305	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP018017	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence	130869-130911	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	382462-382504	7	0.837
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	103183-103225	7	0.837
NZ_CP024883_2	2.2\|4534234\|28\|NZ_CP024883\|CRISPRCasFinder	4534234-4534261	28	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	169438-169465	7	0.75
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	359822-359864	8	0.814
NZ_CP024883_2	2.1\|4534177\|34\|NZ_CP024883\|CRISPRCasFinder	4534177-4534210	34	NZ_CP010865	Marinovum algicola DG 898 plasmid pMaD10, complete sequence	31936-31969	8	0.765
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	CP052389	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1	89173-89215	9	0.791
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	312777-312819	9	0.791
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	26919-26961	11	0.744
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	261672-261714	11	0.744
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	106387-106429	11	0.744
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	116958-117000	11	0.744
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	159892-159934	11	0.744
NZ_CP024883_1	1.3\|1017486\|43\|NZ_CP024883\|CRISPRCasFinder	1017486-1017528	43	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	126444-126486	11	0.744

1. spacer 2.2|4534234|28|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 1, identity: 0.964

tgtggcgcagctgccggttgttgataat	CRISPR spacer
tgtggcgcggctgccggttgttgataat	Protospacer
********.*******************

2. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 1, identity: 0.958

acaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaacggcaccgcgggtaga	Protospacer
***********************

3. spacer 2.1|4534177|34|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.941

ggctgcggcgctaccggctgatggtgtacgggcg	CRISPR spacer
ggttgcggagctaccggctgatggtgtacgggcg	Protospacer
**.***** *************************

4. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.917

acaaaaaacggcaccgcgggtagc	CRISPR spacer
caaaaaaacggcaccgcgggtagc	Protospacer
  **********************

5. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 2, identity: 0.917

acaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaacggcaccgcgagtagt	Protospacer
******************.****.

6. spacer 3.1|4636543|24|NZ_CP024883|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 3, identity: 0.875

acaaaaaacggcaccgcgggtagc	CRISPR spacer
caaaaaaacggcaccgcgagtagc	Protospacer
  ****************.*****

7. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.884

--tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
cctgaacatt--gtagcccggataaggcgctacgcgccgccatcc	Protospacer
  ***.*.**  ****************** **************

8. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to CP052389 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1) position: , mismatch: 6, identity: 0.86

tgagcgtta---ggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
---gcataaaggggtagcccggataaggcgctacgcgccgccatcc	Protospacer
   **.* *   ******************* **************

9. spacer 2.2|4534234|28|NZ_CP024883|CRISPRCasFinder matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 6, identity: 0.786

tgtggcgcagctgccggttgttgataat	CRISPR spacer
attggcgtagctggcggttgttgatgct	Protospacer
  *****.***** ***********. *

10. spacer 2.2|4534234|28|NZ_CP024883|CRISPRCasFinder matches to NZ_MF788070 (Raoultella ornithinolytica strain 23141 plasmid p23141-2, complete sequence) position: , mismatch: 6, identity: 0.786

tgtggcgcagctgccggttgttgataat	CRISPR spacer
caagccgctgctgcaggttgttgataat	Protospacer
.. * *** ***** *************

11. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to CP045556 (Citrobacter sp. S39 plasmid pS39-1, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

12. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP045203 (Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

13. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP022152 (Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

14. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP019987 (Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

15. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP030224 (Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

16. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP026213 (Citrobacter sp. CFNIH10 plasmid pKPC-933d, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

17. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_MG387191 (Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

18. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP048383 (Citrobacter freundii strain 62 plasmid p6_A, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

19. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP026282 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

20. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.837

tgagcgttag---gtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
---gtgccggatcgtagcccggataaggcgcaacgcgccgccatcc	Protospacer
   *.*...*   *********************************

21. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP042535 (Citrobacter freundii strain E51 plasmid pE51_001, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

22. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP007734 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

23. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP026058 (Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

24. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP029436 (Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

25. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP029431 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

26. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP018017 (Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

27. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP029442 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence) position: , mismatch: 7, identity: 0.837

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ccattgaaaggtagcccggagaaggcgcaacgcgccgccatcc	Protospacer
. * .*  ************ **********************

28. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 7, identity: 0.837

tgagcg-ttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
-gtgcgatttggtagcccggagaaggcgcaacgcgccgcctccg	Protospacer
 * *** ** *********** ****************** .*

29. spacer 2.2|4534234|28|NZ_CP024883|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 7, identity: 0.75

tgtggcgcagctgccggttgttgataat	CRISPR spacer
gctggcgcagctgccggtcggtgatgtc	Protospacer
  ****************.* ****. .

30. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.814

---tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
gcctgga---ttggtagcccggataaggcgcatcgcgccgctatcc	Protospacer
   **..   * ******************** ********.****

31. spacer 2.1|4534177|34|NZ_CP024883|CRISPRCasFinder matches to NZ_CP010865 (Marinovum algicola DG 898 plasmid pMaD10, complete sequence) position: , mismatch: 8, identity: 0.765

ggctgcggcgctaccggctgatggtgtacgggcg-	CRISPR spacer
cgctgcggcgctatccgctgatggtgc-tgctcga	Protospacer
 ************.* **********. .*  **

32. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to CP052389 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1) position: , mismatch: 9, identity: 0.791

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
gcacagaaatgtagcccggataaggcgcaacgcgccgtaatcc	Protospacer
  *  *  * ***************************. ****

33. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.791

tgagcgttag---gtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
---ataccagaccgtagcccggataaggcgctacgcgccgccatcc	Protospacer
   .....**   ****************** **************

34. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ttgcgatttggtagcccggagaaggcgcaacgcgccgcgtccg	Protospacer
* .  .** *********** *****************  .*

35. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ttgcgatttggtagcccggagaaggcgcaacgcgccgcgtccg	Protospacer
* .  .** *********** *****************  .*

36. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
ttgcgatttggtagcccggagaaggcgcaacgcgccgcgtccg	Protospacer
* .  .** *********** *****************  .*

37. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
cagttctttggtagcccggacaaggcgcaacgcgccgcctccg	Protospacer
... . ** ***********.****************** .*

38. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
cttctctcccgtagtccggataaggcgcaaagcgccgccatcc	Protospacer
.   . *.  ****.*************** ************

39. spacer 1.3|1017486|43|NZ_CP024883|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 11, identity: 0.744

tgagcgttaggtagcccggataaggcgcaacgcgccgccatcc	CRISPR spacer
cttctctcccgtagtccggataaggcgcaaagcgccgccatcc	Protospacer
.   . *.  ****.*************** ************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2353211 : 2405379

Salmonella_phage(21.62%)

integrase,tail,coat,terminase,portal,tRNA,holin

attL 2364951:2364966|attR 2416664:2416679

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015703188.1\|2353211_2354282_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_020078167.1\|2354337_2355027_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	4.9e-57	53.0
WP_002914084.1\|2355339_2355723_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_015370281.1\|2355768_2357100_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	1.5e-46	31.1
WP_045386924.1\|2357230_2357968_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_045386927.1\|2357952_2359572_-	L-aspartate oxidase	NA	NA	NA	NA
WP_157797648.1\|2359896_2359998_+	rpoE leader peptide RseD	NA	NA	NA	NA
WP_002914074.1\|2359994_2360570_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_015370285.1\|2360602_2361253_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_020078169.1\|2361252_2362209_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_042893105.1\|2362205_2362685_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_015370288.1\|2362869_2364669_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	1.1e-23	25.9
WP_100279529.1\|2364683_2365658_+	signal peptidase I	NA	NA	NA	NA
2364951:2364966	attL	NA	NA	NA	NA
WP_020078171.1\|2365911_2366592_+	ribonuclease III	A0A0P0YM82	Yellowstone_lake_phycodnavirus	1.3e-20	29.7
WP_015370290.1\|2366588_2367494_+	GTPase Era	NA	NA	NA	NA
WP_015370291.1\|2367505_2368243_+	DNA repair protein RecO	NA	NA	NA	NA
WP_100279530.1\|2368254_2368986_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_015370293.1\|2368985_2369366_+	holo-ACP synthase	NA	NA	NA	NA
WP_032707225.1\|2369374_2369635_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.0e-18	55.8
WP_100279531.1\|2369849_2371247_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_024154042.1\|2371243_2371444_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_100279532.1\|2371440_2372844_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	7.1e-212	73.6
WP_100279533.1\|2372899_2373613_+	hypothetical protein	NA	NA	NA	NA
WP_047740568.1\|2373605_2373875_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	8.7e-26	67.1
WP_100279534.1\|2373950_2374178_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_100279535.1\|2374244_2375003_-	DNA-binding protein	NA	NA	NA	NA
WP_100279536.1\|2375059_2377123_-	DNA polymerase	Q775A3	Bordetella_phage	5.7e-274	67.5
WP_157797649.1\|2377150_2377675_+	hypothetical protein	NA	NA	NA	NA
WP_100279538.1\|2377715_2378264_-	DUF2815 family protein	Q775A5	Bordetella_phage	6.0e-66	64.8
WP_100279539.1\|2378280_2379522_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.5e-133	56.6
WP_100279540.1\|2379525_2380422_-	hypothetical protein	Q3LZP9	Bacteriophage	1.8e-06	51.6
WP_157797650.1\|2380727_2380898_-	hypothetical protein	NA	NA	NA	NA
WP_100279542.1\|2381182_2381806_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	2.2e-35	48.5
WP_004141056.1\|2381926_2382139_+	helix-turn-helix transcriptional regulator	A0A0R6PHL1	Moraxella_phage	2.4e-07	43.8
WP_100279543.1\|2382142_2384311_+	replication protein	B6SCY1	Bacteriophage	1.2e-173	72.2
WP_032707206.1\|2384616_2385051_+	antitermination protein Q	B6SD39	Bacteriophage	1.4e-41	59.3
WP_020947700.1\|2385389_2385731_+\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	5.3e-28	67.9
WP_032707202.1\|2385717_2386197_+	glycoside hydrolase family 104 protein	S5FV07	Shigella_phage	2.1e-67	79.1
WP_100280067.1\|2386274_2386604_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	3.3e-19	50.9
WP_100279544.1\|2386759_2387140_+	hypothetical protein	Q76H27	Enterobacteria_phage	1.8e-40	63.5
WP_087867809.1\|2387205_2387448_+	DUF2560 family protein	A0A192Y6S9	Salmonella_phage	6.0e-18	68.5
WP_100279545.1\|2387456_2387990_+	hypothetical protein	A0A192Y6U9	Salmonella_phage	1.6e-10	32.8
WP_032707197.1\|2388021_2388582_+\|terminase	terminase small subunit	A0A1W6JNT5	Morganella_phage	2.0e-56	68.4
WP_100279546.1\|2388562_2390068_+\|terminase	terminase	A0A0M4S5Z3	Salmonella_phage	1.9e-263	84.5
WP_032707369.1\|2390071_2392249_+\|portal	portal protein	G5DA97	Enterobacteria_phage	4.4e-301	75.8
WP_087867812.1\|2392263_2393175_+	scaffolding protein	A0A0M3ULI9	Salmonella_phage	5.3e-115	71.9
WP_100279547.1\|2393174_2394464_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	3.9e-188	74.7
WP_032707191.1\|2394513_2394732_+	hypothetical protein	NA	NA	NA	NA
WP_087867813.1\|2394750_2395254_+	recombinase RmuC	A0A2D1GLR5	Escherichia_phage	5.6e-50	64.2
WP_080687406.1\|2395231_2396653_+	hypothetical protein	A0A075B8I2	Enterobacteria_phage	1.1e-204	70.2
WP_100279548.1\|2396652_2397483_+\|tail	phage tail protein	A0A192Y6T9	Salmonella_phage	6.2e-46	65.6
WP_100279549.1\|2397482_2397962_+	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-64	74.0
WP_100279550.1\|2397936_2398587_+	DNA transfer protein	Q2A0B2	Sodalis_phage	4.5e-28	49.3
WP_100279551.1\|2398596_2399940_+	DNA injection protein	Q716G3	Shigella_phage	1.2e-62	51.5
WP_100279552.1\|2399939_2402660_+	transglycosylase SLT domain-containing protein	A0A2D1GLK8	Escherichia_phage	1.1e-99	30.6
WP_100279553.1\|2402732_2403020_+	hypothetical protein	Q76H12	Enterobacteria_phage	9.9e-20	51.5
WP_049029804.1\|2403046_2403295_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	1.5e-16	54.5
WP_100279554.1\|2403432_2405379_+	hypothetical protein	Q716G1	Shigella_phage	2.8e-33	45.6
2416664:2416679	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2538597 : 2625238

Klebsiella_phage(30.36%)

integrase,tail,capsid,head,terminase,portal,tRNA,holin,protease

attL 2561649:2561673|attR 2602612:2602636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020078209.1\|2538597_2540016_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_015365514.1\|2540071_2540467_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_013878158.1\|2540474_2540828_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_100279573.1\|2541450_2543634_+	EAL domain-containing protein	NA	NA	NA	NA
WP_013878156.1\|2543689_2544892_-	nucleoside permease NupC	NA	NA	NA	NA
WP_032715060.1\|2545237_2546473_+	Mn(2+) uptake NRAMP transporter MntH	NA	NA	NA	NA
WP_013878154.1\|2546512_2546869_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_032715058.1\|2546996_2547989_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_100279574.1\|2548165_2549827_+	indolepyruvate decarboxylase	NA	NA	NA	NA
WP_015365522.1\|2551323_2552289_+	glucokinase	NA	NA	NA	NA
WP_013878149.1\|2552332_2553076_-	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	5.6e-14	26.8
WP_013878148.1\|2553087_2554785_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.5e-46	28.8
WP_013878147.1\|2555166_2556405_+	alanine transaminase	NA	NA	NA	NA
WP_077777854.1\|2556449_2556521_-	membrane protein YpdK	NA	NA	NA	NA
WP_015365525.1\|2556887_2558084_-	MFS transporter	NA	NA	NA	NA
WP_015365526.1\|2558083_2558539_-	nucleoside deaminase	A0A0B5J096	Pandoravirus	2.4e-12	32.8
WP_032715055.1\|2558697_2559375_-	MipA/OmpV family protein	NA	NA	NA	NA
WP_015365529.1\|2559723_2560557_-	hypothetical protein	A0A1W6JPD1	Morganella_phage	9.1e-05	20.8
WP_015365531.1\|2560936_2561428_-	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
2561649:2561673	attL	NA	NA	NA	NA
WP_100279575.1\|2561867_2563043_+\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	2.9e-198	84.0
WP_100279576.1\|2563171_2563492_+	hypothetical protein	NA	NA	NA	NA
WP_100279577.1\|2563484_2563844_+	hypothetical protein	NA	NA	NA	NA
WP_074195452.1\|2563940_2564126_-	hypothetical protein	A0A2R2Z2X2	Escherichia_phage	2.6e-13	61.1
WP_100279578.1\|2564147_2564705_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	4.3e-67	64.9
WP_100279579.1\|2565700_2566054_-	hypothetical protein	NA	NA	NA	NA
WP_100280070.1\|2566493_2567030_-	hypothetical protein	J9Q748	Salmonella_phage	2.4e-75	76.6
WP_100279580.1\|2567032_2567461_-	hypothetical protein	Q5G8U6	Enterobacteria_phage	5.0e-07	46.0
WP_058649498.1\|2567457_2567712_-	hypothetical protein	S5MQM0	Escherichia_phage	3.1e-09	52.1
WP_020804603.1\|2567704_2567908_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
WP_100279581.1\|2567904_2568690_-	hypothetical protein	A4JX52	Burkholderia_virus	7.9e-59	49.4
WP_087796267.1\|2568689_2568989_-	hypothetical protein	K7PJS4	Enterobacterial_phage	6.5e-14	48.6
WP_100280071.1\|2569555_2570203_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.0e-72	62.0
WP_047047442.1\|2570307_2570505_+	hypothetical protein	H9C161	Pectobacterium_phage	3.5e-16	66.1
WP_047047439.1\|2570530_2570992_+	hypothetical protein	K7PJS5	Enterobacterial_phage	2.1e-67	85.5
WP_072056998.1\|2571229_2571442_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.9e-15	70.9
WP_100279582.1\|2571398_2572313_+	transcriptional regulator	H2DE83	Erwinia_phage	6.8e-30	55.5
WP_100279583.1\|2572309_2573119_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.3e-109	68.9
WP_032737684.1\|2573128_2573506_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.8e-48	73.6
WP_100279584.1\|2573518_2574499_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.4e-135	66.9
WP_040088784.1\|2574513_2574876_+	antitermination protein Q	K7PGW2	Enterobacterial_phage	9.5e-60	95.0
WP_040088785.1\|2574898_2575342_-	hypothetical protein	A5LH78	Enterobacteria_phage	4.6e-48	70.1
WP_077268298.1\|2575345_2576059_-	hypothetical protein	A5LH79	Enterobacteria_phage	2.7e-122	91.1
WP_024176410.1\|2576609_2576909_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-39	83.8
WP_004184488.1\|2576905_2577445_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
WP_070585058.1\|2577441_2577789_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.2e-37	78.3
WP_100279585.1\|2577785_2578061_+	hypothetical protein	NA	NA	NA	NA
WP_100279586.1\|2578011_2578200_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	2.8e-23	88.1
WP_100279587.1\|2578462_2578720_+	hypothetical protein	NA	NA	NA	NA
WP_100279588.1\|2578849_2579095_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.8e-31	90.1
WP_100279589.1\|2579164_2579392_+	hypothetical protein	NA	NA	NA	NA
WP_040177136.1\|2579559_2579742_+	hypothetical protein	NA	NA	NA	NA
WP_054628610.1\|2579749_2579977_+	hypothetical protein	NA	NA	NA	NA
WP_100279590.1\|2579994_2581452_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	1.5e-268	90.3
WP_100279591.1\|2581433_2582024_+	hypothetical protein	K7PGW6	Enterobacterial_phage	1.0e-87	78.1
WP_100279592.1\|2582023_2582374_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	6.0e-51	81.0
WP_045326830.1\|2582531_2583029_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	5.5e-74	84.8
WP_047047382.1\|2583028_2584765_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	99.3
WP_047047380.1\|2584764_2586069_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	5.6e-235	94.0
WP_100279593.1\|2586082_2586931_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	5.0e-136	91.4
WP_100279594.1\|2586940_2588149_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	4.4e-194	86.9
WP_100279595.1\|2588201_2588528_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.6e-45	78.7
WP_100279596.1\|2588591_2588804_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	2.5e-12	65.7
WP_100279597.1\|2588805_2589138_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	1.0e-52	91.8
WP_100279598.1\|2589130_2589670_+	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	8.5e-89	93.9
WP_100279599.1\|2589666_2590032_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	2.7e-54	81.8
WP_100279600.1\|2590090_2590573_+\|tail	phage tail protein	Q9MCU9	Escherichia_phage	5.7e-52	58.6
WP_100279601.1\|2590615_2590969_+\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	1.3e-56	94.0
WP_100279602.1\|2591001_2591265_+\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	3.2e-41	93.1
WP_157797651.1\|2591328_2591721_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	41.4
WP_100279603.1\|2591782_2594215_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	74.8
WP_100279604.1\|2594214_2594694_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.9e-61	67.5
WP_100279022.1\|2594680_2595163_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	6.1e-62	73.8
WP_032712197.1\|2595172_2595553_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.3e-59	81.0
WP_100279605.1\|2600585_2601338_+	hypothetical protein	A0A286S1R5	Klebsiella_phage	3.0e-47	44.5
WP_100279606.1\|2601868_2602108_-	DinI family protein	K7P6H1	Enterobacteria_phage	5.2e-30	83.5
WP_100279607.1\|2602181_2602508_+	hypothetical protein	K7PGV5	Enterobacterial_phage	3.1e-25	52.8
WP_047045003.1\|2602709_2603621_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	6.4e-121	76.5
2602612:2602636	attR	NA	NA	NA	NA
WP_015365533.1\|2603868_2604630_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_072201312.1\|2604695_2606024_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_015706185.1\|2606389_2606674_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_100279608.1\|2606833_2608144_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_032715051.1\|2608143_2610288_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_015365538.1\|2610498_2610984_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_015365539.1\|2611009_2611561_-	endonuclease SmrB	NA	NA	NA	NA
WP_032706267.1\|2611727_2612660_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_015365541.1\|2612701_2613787_+	chorismate synthase	A0A291AU41	Pandoravirus	1.7e-88	46.4
WP_015706180.1\|2613790_2614615_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_015365543.1\|2614614_2615424_+	TSUP family transporter	NA	NA	NA	NA
WP_042893869.1\|2615423_2615972_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_100279609.1\|2616004_2616286_+	YfcL family protein	NA	NA	NA	NA
WP_032715049.1\|2616396_2618385_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_015706178.1\|2618543_2619764_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_032715048.1\|2619902_2621078_+	MFS transporter	NA	NA	NA	NA
WP_072255026.1\|2621120_2622083_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_032715047.1\|2622213_2623350_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.2e-20	27.9
WP_015365551.1\|2623412_2624426_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_032708800.1\|2624425_2625238_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_3

3255137 : 3306074

Escherichia_phage(20.0%)

integrase,tail,bacteriocin,coat,terminase,holin

attL 3257817:3257832|attR 3320850:3320865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032714707.1\|3255137_3255947_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	1.0e-13	27.8
WP_100279717.1\|3255948_3256941_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	1.6e-08	26.1
WP_015366244.1\|3256940_3257831_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
3257817:3257832	attL	NA	NA	NA	NA
WP_072383731.1\|3258007_3259195_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.6e-119	52.4
WP_072383728.1\|3259494_3259725_-	hypothetical protein	G8C7S3	Escherichia_phage	1.9e-29	84.2
WP_072383725.1\|3259726_3259948_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	7.4e-15	54.3
WP_072383723.1\|3259944_3260136_-	DUF1382 family protein	G9L698	Escherichia_phage	1.6e-13	64.4
WP_072383721.1\|3260132_3260669_-	hypothetical protein	J9Q748	Salmonella_phage	5.2e-78	78.9
WP_072383719.1\|3260665_3260884_-	hypothetical protein	NA	NA	NA	NA
WP_100279718.1\|3260880_3262050_-	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	6.9e-144	65.7
WP_072383716.1\|3262046_3262706_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.6e-116	88.6
WP_072383714.1\|3262719_3263004_-	hypothetical protein	NA	NA	NA	NA
WP_072383711.1\|3263018_3263486_-	single-stranded DNA-binding protein	A0A2H4JHK3	uncultured_Caudovirales_phage	1.7e-45	67.9
WP_072383709.1\|3263486_3264110_-	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	5.3e-74	70.0
WP_157797653.1\|3264106_3264265_-	hypothetical protein	NA	NA	NA	NA
WP_015705909.1\|3264517_3264724_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	2.5e-25	76.5
WP_157797654.1\|3264722_3264947_+	hypothetical protein	NA	NA	NA	NA
WP_072383707.1\|3265502_3265874_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	9.5e-31	50.0
WP_072383706.1\|3265851_3266913_-	N-acetyltransferase	NA	NA	NA	NA
WP_072383705.1\|3267023_3267143_-	hypothetical protein	NA	NA	NA	NA
WP_072383704.1\|3267191_3267887_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	6.9e-83	67.0
WP_015705720.1\|3267991_3268222_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	4.5e-23	68.9
WP_072383703.1\|3268316_3268859_+	regulator	M9NZI6	Enterobacteria_phage	3.2e-67	73.3
WP_072383781.1\|3269043_3269976_+	replication protein	A0A077KB11	Edwardsiella_phage	1.3e-55	77.2
WP_072383702.1\|3269972_3270674_+	Replication protein P	A0A0M3ULE2	Salmonella_phage	3.6e-103	80.4
WP_072383701.1\|3270670_3270964_+	protein ren	M1FPD5	Enterobacteria_phage	3.4e-23	60.2
WP_072383779.1\|3271388_3271925_+	hypothetical protein	J9Q748	Salmonella_phage	4.8e-76	77.2
WP_081366158.1\|3271921_3272164_+	hypothetical protein	NA	NA	NA	NA
WP_072383700.1\|3272361_3273501_+\|tail	tail fiber domain-containing protein	A0A1Z1LXX7	Serratia_phage	5.2e-19	28.5
WP_100280079.1\|3273944_3275498_+	klebicin D activity protein	NA	NA	NA	NA
WP_045364017.1\|3275497_3275761_+	hypothetical protein	NA	NA	NA	NA
WP_072383698.1\|3275871_3276129_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_072383694.1\|3277068_3277719_+	hypothetical protein	NA	NA	NA	NA
WP_100279719.1\|3277895_3278351_+	hypothetical protein	I6PD71	Cronobacter_phage	7.8e-59	66.2
WP_072383690.1\|3278350_3278521_+	NinE family protein	K7P7K0	Enterobacteria_phage	2.9e-19	90.6
WP_072383688.1\|3278513_3278804_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.1e-45	89.6
WP_072383686.1\|3278800_3279163_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	4.3e-52	83.2
WP_072383684.1\|3279159_3279300_+	YlcG family protein	NA	NA	NA	NA
WP_100279720.1\|3279296_3279986_+	antiterminator	I6PDF8	Cronobacter_phage	1.3e-62	55.8
WP_047075687.1\|3280059_3280347_-	hypothetical protein	NA	NA	NA	NA
WP_131645981.1\|3280776_3281076_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	6.7e-43	88.9
WP_045419413.1\|3281072_3281615_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.1e-70	70.2
WP_045419410.1\|3281611_3281953_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	7.6e-35	72.6
WP_047075689.1\|3281955_3282231_+	hypothetical protein	G8C7W1	Escherichia_phage	4.1e-15	50.0
WP_072383680.1\|3282220_3282376_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	8.5e-18	84.3
WP_045419402.1\|3283175_3283421_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	6.3e-31	91.0
WP_045419398.1\|3283506_3283764_+	hypothetical protein	NA	NA	NA	NA
WP_047075691.1\|3283858_3284851_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	6.3e-29	34.5
WP_045419394.1\|3284828_3286133_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.7e-144	59.8
WP_045419392.1\|3286137_3287562_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.4e-193	71.7
WP_100279721.1\|3287545_3288658_+	hypothetical protein	I6PD76	Cronobacter_phage	1.5e-108	53.6
WP_045419387.1\|3288763_3289528_+	hypothetical protein	G8C7P6	Escherichia_phage	9.9e-75	58.7
WP_045419385.1\|3289615_3290752_+\|coat	coat protein	G8C7P7	Escherichia_phage	5.7e-159	75.9
WP_100279722.1\|3290791_3291004_+	hypothetical protein	NA	NA	NA	NA
WP_045419381.1\|3291007_3291418_+	hypothetical protein	A0A0H5AUF0	Pseudomonas_phage	2.3e-09	39.7
WP_048228844.1\|3291419_3291653_+	hypothetical protein	A0A1V0E8A3	Vibrio_phage	5.8e-10	50.8
WP_045419377.1\|3291639_3292023_+	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	6.0e-20	44.4
WP_045419374.1\|3292024_3292576_+	hypothetical protein	G8C7Q1	Escherichia_phage	1.1e-27	39.8
WP_015705691.1\|3292572_3292965_+	hypothetical protein	NA	NA	NA	NA
WP_042896383.1\|3292988_3294161_+	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	6.5e-25	27.9
WP_100279723.1\|3294215_3294698_+	hypothetical protein	NA	NA	NA	NA
WP_123273243.1\|3294835_3295033_+	hypothetical protein	NA	NA	NA	NA
WP_100279724.1\|3295099_3295432_+	hypothetical protein	M1PRT9	Cellulophaga_phage	8.5e-31	65.3
WP_100279725.1\|3295551_3298959_+\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	5.4e-96	38.1
WP_032712199.1\|3298958_3299432_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.1e-58	67.1
WP_045419358.1\|3299418_3299901_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	7.9e-62	73.8
WP_045419356.1\|3299910_3300291_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	8.5e-59	80.2
WP_072383777.1\|3300776_3303323_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	70.4
WP_100279726.1\|3305321_3306074_+	hypothetical protein	A0A286S1R5	Klebsiella_phage	9.2e-49	45.7
3320850:3320865	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3378145 : 3383500

Escherichia_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100280081.1\|3378145_3379519_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.9e-53	32.3
WP_032711785.1\|3379566_3380502_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.5e-138	93.0
WP_032711784.1\|3380852_3381188_-	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	2.4e-41	76.8
WP_042894575.1\|3381245_3381542_-	hypothetical protein	A0A222YWE2	Escherichia_phage	4.0e-40	77.9
WP_015705624.1\|3381778_3382204_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	3.0e-28	50.7
WP_100279741.1\|3382357_3383500_-	porin OmpC	Q1MVN1	Enterobacteria_phage	6.2e-113	58.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024883

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection