CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024974	Streptococcus suis strain CZ130302 chromosome, complete genome	3 crisprs	csa3,DinG,cas3,WYL,DEDDh	1	1	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024974_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024974_1

756369-756457

Orphan

Consensus_repeat	Method
TATCAAATATGAAAGGAAATGTTTAATTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024974_1

>merge|NZ_CP024974|1|756369-756457|CRISPRCasFinder
TATCAAATATGAAAGGAAATGTTTAATTTAACTGTTTCGTTAAATTGAACCCGCCTAACTATCAAATATGAAAGGAAATGTTCAATTTA

>NZ_CP024974|1|1|756369-756457|CRISPRCasFinder
TATCAAATATGAAAGGAAATGTTTAATTTA	ACTGTTTCGTTAAATTGAACCCGCCTAAC
TATCAAATATGAAAGGAAATGTTCAATTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024974.1\|WP_004299042.1\|762021_762237_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP024974.1\|WP_004299010.1\|752341_752785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_004299019.1\|754197_755196_+\|peptidylprolyl-isomerase-PrsA	unknown	unknown	gnl\|CDD\|179281
NZ_CP024974.1\|WP_004299013.1\|752795_753344_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_004299046.1\|762233_762992_+\|DUF3169-family-protein	unknown	unknown	gnl\|CDD\|371493
NZ_CP024974.1\|WP_004299025.1\|756582_759201_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP024974.1\|WP_004298997.1\|746344_747094_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_050571942.1\|753418_754138_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP024974.1\|WP_100198755.1\|761128_761314_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_004299022.1\|755557_756043_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227231
NZ_CP024974.1\|WP_004299032.1\|759975_760878_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238919
NZ_CP024974.1\|WP_004299028.1\|759275_759728_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|223372
NZ_CP024974.1\|WP_032510865.1\|763551_763737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_004299006.1\|750537_752340_+\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NZ_CP024974.1\|WP_004298988.1\|742910_746009_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226115
NZ_CP024974.1\|WP_004298998.1\|747299_749303_+\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237028
NZ_CP024974.1\|WP_004299049.1\|763022_763532_+\|DUF3278-domain-containing-protein	unknown	unknown	gnl\|CDD\|371668
NZ_CP024974.1\|WP_033875585.1\|763762_764452_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP024974.1\|WP_004299002.1\|749367_750309_+\|competence-protein-CoiA	unknown	unknown	gnl\|CDD\|226875
NZ_CP024974.1\|WP_004299039.1\|761454_762009_+\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690

Protein	Function_ID	Function_description	E-value
NZ_CP024974.1\|WP_004299042.1\|762021_762237_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	6.28588e-24
NZ_CP024974.1\|WP_004299032.1\|759975_760878_+\|carbohydrate-kinase	gnl\|CDD\|238919	cd01944, YegV_kinase_like, YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.	1.30864e-58
NZ_CP024974.1\|WP_004299019.1\|754197_755196_+\|peptidylprolyl-isomerase-PrsA	gnl\|CDD\|179281	PRK01326, prsA, foldase protein PrsA; Reviewed.	1.18746e-121
NZ_CP024974.1\|WP_004299039.1\|761454_762009_+\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	4.14343e-19
NZ_CP024974.1\|WP_004299025.1\|756582_759201_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP024974.1\|WP_004299046.1\|762233_762992_+\|DUF3169-family-protein	gnl\|CDD\|371493	pfam11368, DUF3169, Protein of unknown function (DUF3169). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.0153e-19
NZ_CP024974.1\|WP_050571942.1\|753418_754138_+\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	4.28817e-73
NZ_CP024974.1\|WP_004299028.1\|759275_759728_+\|cytidine-deaminase	gnl\|CDD\|223372	COG0295, Cdd, Cytidine deaminase [Nucleotide transport and metabolism].	1.55717e-29
NZ_CP024974.1\|WP_004299022.1\|755557_756043_+\|hypothetical-protein	gnl\|CDD\|227231	COG4894, COG4894, Uncharacterized conserved protein [Function unknown].	9.35332e-47
NZ_CP024974.1\|WP_004298998.1\|747299_749303_+\|methionine--tRNA-ligase	gnl\|CDD\|237028	PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP024974.1\|WP_004298988.1\|742910_746009_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226115	COG3587, COG3587, Restriction endonuclease [Defense mechanisms].	0
NZ_CP024974.1\|WP_004299006.1\|750537_752340_+\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NZ_CP024974.1\|WP_033875585.1\|763762_764452_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.43312e-11
NZ_CP024974.1\|WP_004299002.1\|749367_750309_+\|competence-protein-CoiA	gnl\|CDD\|226875	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease domain [General function prediction only].	1.08738e-91
NZ_CP024974.1\|WP_004299049.1\|763022_763532_+\|DUF3278-domain-containing-protein	gnl\|CDD\|371668	pfam11683, DUF3278, Protein of unknown function (DUF3278). This bacterial family of proteins has no known function.	0.000161912

>NZ_CP024974.1|WP_004299022.1|755557_756043_+|hypothetical-protein
MKQFQVKQRFTFGGEKFDIRDSFGDLAYQVEGSFLEIPKRFIVTNSRGGEVCQITKKFLTFLPQFTIDMADGHSFYLQKEFTFFKDRYTVENLGLILDGNIWDLDFRLKRPDGMLVAEISKELFHLTSHYSVTVLEDSYADLVISLVVAIDYIEMMEDASN
>NZ_CP024974.1|WP_004299019.1|754197_755196_+|peptidylprolyl-isomerase-PrsA
MRTKKIMAGAVTLLATVTLAACSNAADKDIITMKGNTITVSEFYEKVKTNSQAQQVLLSMIISDVFEDQYGDKVTAKEVDEAYDKMAEQYGDSFATALSSAGLTQETYKEQIRTNKLVEYAVKQAAEKELTDENYKAAYDAYTPEVTARIIKLTDEAKANEVLAAAQAEGADFAQLAKDNSTDTATKDNGGEVKFDSTSTTVPTEVQNAVFALDAGQVGASVISVVDMTTYTTSYYVVKLEAKSEKSANWEDYKDKLKEIILAQKQSDSTFVATVLKEALQKANVKVKDSAFQNLLSQYVTTEESSSSSTESSSSSTESSSSTTESSSSSGQ
>NZ_CP024974.1|WP_050571942.1|753418_754138_+|O-methyltransferase
MVESYSKNANHNMRRPVVKEEIVDFMRTRQAQNTGFLKELEEFARQENIPVIPHETVAYFRLLMQTLQPKRILEIGTAIGFSALLMADNSPHSKITTIDRNEEMIGFAKENFAKYDQRQQIELLEGEAMDILPTLPNDAYDFVFMDSAKSKYIVFLPEVLKKVKVGGLIILDDIFQGGDVAKDIKDVRRGQRTIYKGLQRLFDATLDNPDVTASLVSMSDGLLMLRKNRENVDLKHTEI
>NZ_CP024974.1|WP_004299013.1|752795_753344_+|hypothetical-protein
MLTEEQLQDIFELADLMSNGDRELFLQLRDVVFASDPNQILDSIERILEPDSFDDFLDRVGESEKENLWLILIKLLEHFNYICVRDYKDNLEDFIYFFDRLHQVRNAGISLKLDSDGLNPAASISEWARVVDSKYLDENFCLGAVDIDTDSYYLFFSKQETFVRLRELAGNLGYRIDYAKNM
>NZ_CP024974.1|WP_004299010.1|752341_752785_+|hypothetical-protein
MISYKRSIVIPSVISLVLILLGLGGLTRPEPSMGSVVYLIFLQPLLVYLYILRKQKAVFILTNQYLEFQEHFWSERQRHSLEEIAEIRYIVSPVYRGYQSKRLRIVGNKGGLLAVVSLNRLDGADFNDIYHFVEQVAPHIRWDFSNS
>NZ_CP024974.1|WP_004299006.1|750537_752340_+|oligoendopeptidase-F
MSKQRHEIEEKYQWDLTTIFPTDDAWEAELADLQAETEKTKEFAGHLLDSAKSLLEISETQLGLMRRIEKLYVYASMKNDQDTREGKYQEFQAKAMGLYAAFSQAFAFYEPEFMAITEEQLEAFKAEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAATSEIFESPAETFSVLDNASLRFPEIADEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAMYGTYEQFQHTYAKTLQSNVKVNNLKARLRKYDSARHASLAANFIPESVYDTLVAAVNKHLPLLHRYIKLRKKLLGIEDLKMYDMYTPLSDFSTKISYEDALKKCQETLEIFGEDYSAIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSLHSMLTRKTQPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEHAIYKADQEGQVLTADFLNELYGQTNEKYYGLSAEENPEIQFEWARIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSLNVIAKAGVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL
>NZ_CP024974.1|WP_004299002.1|749367_750309_+|competence-protein-CoiA
MLVALDEDGQVFNVLENPAPQGSFSCPGCGGPVRYKSGKVLRSHFAHVTLRDCTYFSENESAQHLSLKSCLYSWLINAEQVELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEADLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGFHLWELDDEKKELRLRYLIHEDLRGKVHCLTKAFPFGQGNLLDILRLPFAKQALSYFTCSVDQDLLDYVAKQLYYRVPKWMSLQAEAYQQGKNLLSQSLDDFYPQIRLPRSAIGFAQIKQDLTPIYQAFDLFYDKAEDKRKQILYPPIIYRKPM
>NZ_CP024974.1|WP_004298998.1|747299_749303_+|methionine--tRNA-ligase
MTKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIEEKAKEAGLTPQAYVDGMAVGVKELWNLLHISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYATALGYGQEDTANYDKFWNGTVYHMVGKDILRFHSIYWPIMLMMLDMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVAMLNKYFGGQVPTFVANVTDFDADLAAVVAENLASYHKYMEAVDYPRALEAVWNIISRTNKYIDETAPWVLAKDEADRDKLAAVMAHLTAGLRVVAHLIQPFMMTTSNAIMEQLGLGTAFDLENLDFAGLPAGLTVVAKGTPIFPRLDMEEEIAYIQAQMGGSSAISQEEEKEWNPADVELKNEKAAIKFEDFDKVEIRVAEVKEVAKVEGSDKLLKFRLDAGDGQDRQILSGIAKYYPNEQELVGKKVQIVANLKPRKMMGLLSQGMILSAEHGDNLTLLTVDPSVPNGSQIG
>NZ_CP024974.1|WP_004298997.1|746344_747094_+|hypothetical-protein
MPYRKLTSRDRSFIKGQTDRLLNQMNSSTEYLATVQTYEAAKARANQAYLAMELEDNPEKKLRLAKLVETYAAQAQAILDEWEEENKQAEKATRNVKLILWLTVLFTLSFVFPVNIILAILFAVWSYRNYLRSSRIAQVPKSTASQSLVTEEESYEDWLTEKIVTLNKDKREWIEAMLTKYDNLDDIAAGIGEMDEIDKVAGKNLLRRYQDILADIEKLPDSDQKTYYLDFHREMIADLENVFEQLHIV
>NZ_CP024974.1|WP_004298988.1|742910_746009_+|DEAD/DEAH-box-helicase-family-protein
MKLQFKQQQFQLDAVASVVDVFAGQGKHSGFDYHMDKGQGTGAELDMNFIGFRNARIQLSQDTISQQVRSQQLRYGLKPSENLSIQKVDGRPSYNLTIEMETGTGKTYTYIRTLMELNKQYGWLKFIIVVPSIAIREGVLKSFEIMADHFQMEYGKKPRYFVYDSSRLGELDKFANSSDIQVMIINSQAFNATGADARRIHTEQESFRWRKPIDVIAATNPILIIDEPQSVEGKKTKERLEDFKPLFTLRYSATHKDKHDMIYRLDALDAYNKKLVKKIAVKTVEQTSTTGTQGYLYLQELVPQKSGYPKARIEFEVRTKSGDVKRVTKLVEEPFALYEESGNLPAYQDGWTLSHFDAREGENSIQIGANRKLHVGEVIGETNEDDIRRIQIRETIASHLQKEEGLYKRGIKVLSLFFIDEVAKYKCYDEQNDAYNGTYAQMFEEEYEAQVKALLADPNLHGSNFWHYLNNHQEGNPVHAGYFSVDKVKKSDKVKFVDYKSATEKRNNQSNDKDAFDLIMKDKERLLSFDEPVRFIFSHSALKEGWDNPNVFQICTLKNTGTETEKRQKIGRGMRLAVDQKGVRQDEELLGADVHNINKLTVIANESYEDFAKNLQRELKEILADRPSKVEVDLFVNEVLENEAGQKLTVTKEVAKEIEHQLIKQDYIDSKGNLTTTYFEQKETSHFTLSEHLAGYEVAVKDILETIYDANRYQIERENDSEVVFAREINPDNYNRQEFKRLWESIHHKSTYYVEFDDEELIEKSVKVINEALFVKKPSYMITEAEAREMKAEQGLDFKVNKDGKRQAELDKSSIQLRYDLLGEIASRTELKRKTVANILKQISPSKFDMFAYNPEAFIQRTSRLINEQKASQVIEHIRYNILEETFDASVFTDNPESGKLSDKRILESQKGVYNYVKVDSDTERKFKEELDQFEDVMVYTKLPSNFKISTPLGAYNPDWAIAFRDGSVKHVYFVAETKGSMSSLQLKGAELAKIECAKAHFKALKEKGLIADDHMYDVVDSYEKLLEIVRG
>NZ_CP024974.1|WP_004299025.1|756582_759201_+|alanine--tRNA-ligase
MKNLSSAQIRQMWLDFWKSKGHSVEPSANLVPVNDPTLLWINSGVATLKKYFDGSVIPDNPRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFRDEAIEWGFELLTSPEWFALPKDKLYMTYYPDDVDSYNRWIALGVEPSHLIPLEDNFWEIGAGPSGPDTEIFFDRGTDFDPENIGIRLLEEDIENDRYIEIWNIVLSQFNADPAVPRSEYKELPNKNIDTGAGLERLAAIFQGAKTNFETDLFLPIIREVEKISGKTYDQDGDNMSFKVIADHIRALSFAIGDGALPGNEGRGYVLRRLLRRASMHGQRLGITEPFLYKLVETVGNIMESYYPEVLEKRAFIEKIVKSEEESFARTIHTGSQFAEQLMDKLAAEGKSEIDGRDIFKLYDTYGFQVELTEELAEHRGMTLDIAGFEAAMKEQQDRARASVVKGGSMGMQNETLAAITEDSNFVYGQTDLEASLSVIVADNARTEAVSEGQALLVFDQTPFYAEMGGQVADHGFVKNAAGDIVATVIDVQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVEKNHTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIWNAIPVVTVETDIDTAKEMGAMALFGEKYGKEVRVVTIGDYSVELCGGTHVSNTAEIGIFKILKEEGIGSGTRRIIAVTGREAFLAYRDQEDALKEVAATIKSPQIKEVPNKVESLAQQVRDLQKENAALKEKAAAAAAGDVFKEVKDANGIRYIASQVQVSDAGALRTFADNWKQKDYSDVLVLVAAIGDKVNVLVASKSSDVHAGNLIKVLAPIVAGRGGGKPDMAMAGGSDASAIQTLLNSVADNL
>NZ_CP024974.1|WP_004299028.1|759275_759728_+|cytidine-deaminase
MEHVSDIWQELYNQAKVHYAPHYVSPFIYSNHVVAAIEAEDGQIYTGYCFEATAGVFHLCAERAAAFNMFQDSGQTAIKRIIAFRDQAPFGEGSGMPCGACREFLMQLSAENAQTEIMVDFDKRETITLGELMPYWWGEERMQAGTDHLE
>NZ_CP024974.1|WP_004299032.1|759975_760878_+|carbohydrate-kinase
MGKCLVIGSTVCDVMIYLDALPGRQGDAHIKKQVMSLGGCAFNVVNILHHLGVEYDFISPVGTGIYGTFVKDNLYKLGIQTPISLDGANGCCYCFVESDGERTFLSDHGVEYSFDPAWLDGYDLSQYDYVYICGLEVEEDTGQALVDWLKTCGRSVIFAPGPRGNLIPEKRMAELLELSPILHLNEQETLSLSQETDIKTAIRVLYGKTKQLLIVTRGSDGVVAFDGVWYEVPSVPTEIVDTVGAGDSHVGAMMAALATDKTIAESLAFANRVASYVVATQGVHLPSHMYEELRSQLNSL
>NZ_CP024974.1|WP_100198755.1|761128_761314_+|hypothetical-protein
MLITGTTVARAVEIGSILLLAYILLSDLLGWSDMDTALITTLIASIACIEASLQMEKKGNK
>NZ_CP024974.1|WP_004299039.1|761454_762009_+|DUF3267-domain-containing-protein
MENKKKLYEVDVRSDKKLAARLYVTTILLVFPFFWLFGFIASKVEFQNVMNEMQFIEALFVFLMLIIIHEWIHGLFFKIFCPKNPVKYGIKWKTGMAYAISPNSLYNRFQTVVIALAPFVLISLGLTASAMFGWLDKGAYQILATMHAAACIGDFYYTYLLMTKFKEVAVEVAVTEKSLIIYQA
>NZ_CP024974.1|WP_004299042.1|762021_762237_+|helix-turn-helix-transcriptional-regulator
MEYVLKNRLKELRARDSLNQTELAKLAEVSRQTISLIERGEYTPSVVIAMRIAQIFNENVENVFQLVEVEE
>NZ_CP024974.1|WP_004299046.1|762233_762992_+|DUF3169-family-protein
MKQGKQISTKQRWMRNLTYLFLGAIFGAFYGFFGVLISKFGLPPFVNLDNFLFCLRIVTFVIFAGTVYFILKANQTHKLYHSISDEDEERVDETYMKMFRNLEYANISFNVAASLTLLNLGLGFGVTFLEKGALMYGSIFDAVFYVILLISQIFIMKLTQKIREYKLSVFATVKEMKDFAEAMDEGEKQANYEMSFQIVFTLNQIVLPGLYLFLFVLSMLLQERQITAFLVVAFLHIYINVMQVRMVRRYFK
>NZ_CP024974.1|WP_004299049.1|763022_763532_+|DUF3278-domain-containing-protein
MKKENLHIRAIRYFYDIVGELDEVSYATLTNFGNNMYMLFMTVTLVSFLVSFALGEDVMGISLFLTLVYSQFKQDAIIKQMGLDKLFVAKADVKLARKKMMKRTLFQTLQIAVYSLLVSICLWQSQIPQESGTSAAEYFQFVTPMTVVLLTLVGFLSFNIVNRKKIKLI
>NZ_CP024974.1|WP_032510865.1|763551_763737_+|hypothetical-protein
MKFFKKIYLVLLIGLGLYAVGYIFGEWLATGQIDVSTLNILLPMVLGLPALLLIEKESNEN
>NZ_CP024974.1|WP_033875585.1|763762_764452_+|CPBP-family-intramembrane-metalloprotease
MNRLGSVKDWNVVKNWKFLFVGLAVVALNVLTQMAVFTLPNFDGTNLLIAAALILLAVLLGLILTGKLGLWKGEQKWGMGANVGFIVLAFIVMFGLKIIGGQLIMLEEGYGQTTANQEIINNSGLPTLVLFLFTVFFAPVLEELLFRGILMGKVFGKDSIVGLLLSSFLFGIIHNPTNIGSWVIYGGMGLVLGLAYRISGKYTNALILHSLNNLLGFLLMLLMQSLGLI

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Crispr_ID: NZ_CP024974_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024974_2

872686-872801

Orphan

Consensus_repeat	Method
TTTTCAATGTCTGGGAGACTGTTTTATCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024974_2

>merge|NZ_CP024974|2|872686-872801|CRISPRCasFinder
TTTTCAATGTCTGGGAGACTGTTTTATCCCCGAGCTAGTATAGCGAGGGTTATAGTAAGAACAAATCCGAAAATTTTCGGACTTGTTTTTCAATGTCAGGGAGACTGTTTTATCCC

>NZ_CP024974|2|2|872686-872801|CRISPRCasFinder
TTTTCAATGTCTGGGAGACTGTTTTATCCC	CGAGCTAGTATAGCGAGGGTTATAGTAAGAACAAATCCGAAAATTTTCGGACTTGT
TTTTCAATGTCAGGGAGACTGTTTTATCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024974.1\|WP_002939627.1\|873426_873819_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002939613.1\|866052_867777_+\|septation-ring-formation-regulator-EzrA	unknown	unknown	gnl\|CDD\|179877
NZ_CP024974.1\|WP_002939641.1\|878331_879171_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002939616.1\|869252_870380_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP024974.1\|WP_002935704.1\|871209_872517_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP024974.1\|WP_002939630.1\|875547_876210_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_164071437.1\|862056_863277_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP024974.1\|WP_002939628.1\|873835_875212_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002939617.1\|870370_870601_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002939638.1\|876820_878230_+\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|279863
NZ_CP024974.1\|WP_033875297.1\|870607_871060_-\|DUF1694-domain-containing-protein	unknown	unknown	gnl\|CDD\|377952
NZ_CP024974.1\|WP_002939655.1\|879154_879349_+\|DUF3173-family-protein	unknown	unknown	gnl\|CDD\|371495
NZ_CP024974.1\|WP_002939427.1\|864011_865964_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_CP024974.1\|WP_002939614.1\|867828_868464_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP024974.1\|WP_002939615.1\|868494_869145_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_CP024974.1\|WP_000026310.1\|876386_876824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_033875299.1\|875327_875540_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226181
NZ_CP024974.1\|WP_002939665.1\|881058_881208_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002939658.1\|879352_880579_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP024974.1\|WP_002939612.1\|863290_863830_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153229

Protein	Function_ID	Function_description	E-value
NZ_CP024974.1\|WP_002939613.1\|866052_867777_+\|septation-ring-formation-regulator-EzrA	gnl\|CDD\|179877	PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional.	0
NZ_CP024974.1\|WP_002939616.1\|869252_870380_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	2.03691e-153
NZ_CP024974.1\|WP_002935704.1\|871209_872517_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP024974.1\|WP_164071437.1\|862056_863277_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	1.29703e-94
NZ_CP024974.1\|WP_002939658.1\|879352_880579_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	6.64968e-27
NZ_CP024974.1\|WP_002939638.1\|876820_878230_+\|cell-division-protein-FtsK	gnl\|CDD\|279863	pfam01580, FtsK_SpoIIIE, FtsK/SpoIIIE family. FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE which has roles in regulation of prespore specific gene expression in B. subtilis. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.	0.00484814
NZ_CP024974.1\|WP_033875299.1\|875327_875540_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	3.60586e-15
NZ_CP024974.1\|WP_002939655.1\|879154_879349_+\|DUF3173-family-protein	gnl\|CDD\|371495	pfam11372, DUF3173, Domain of unknown function (DUF3173). This family of proteins with unknown function appears to be restricted to Firmicutes. These proteins appear to be distantly related to HHH domains and are therefore likely to be DNA-binding. Genomic environment-visualisation confirms the likely function as being DNA-binding, as this short protein lies very closely between an integrase and a replication protein (http://www.microbesonline.org/).	3.6012e-18
NZ_CP024974.1\|WP_002939427.1\|864011_865964_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_CP024974.1\|WP_002939614.1\|867828_868464_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.3314e-100
NZ_CP024974.1\|WP_002939615.1\|868494_869145_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19851e-119
NZ_CP024974.1\|WP_033875297.1\|870607_871060_-\|DUF1694-domain-containing-protein	gnl\|CDD\|377952	pfam07997, DUF1694, Protein of unknown function (DUF1694). This family contains many hypothetical proteins.	1.3523e-27
NZ_CP024974.1\|WP_002939612.1\|863290_863830_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153229	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.	1.20078e-62

>NZ_CP024974.1|WP_002935704.1|871209_872517_+|phosphopyruvate-hydratase
MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDGVETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK
>NZ_CP024974.1|WP_033875297.1|870607_871060_-|DUF1694-domain-containing-protein
MNDLNTTILQKASGETRLNPDEQRLYMGTYRERVVLLVSFDDLSSEVVGNKFDTICQKLANSYSPLFLKLSPALSDKQQISLLKIAQSFGITTAIIDEKMGQSPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDAKPSFWKKLFG
>NZ_CP024974.1|WP_002939617.1|870370_870601_+|hypothetical-protein
MELVKYVAIILFIFICLAKLVSVMRLSEKERGTETNVIKANGAMFFFNEKNERGRLLGILCLTCIIFALIFILLYR
>NZ_CP024974.1|WP_002939616.1|869252_870380_+|glycerate-kinase
MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDGGEGTVESLIQALSLDETQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASIPHERRSPLFIKTQGVGELIVELVQNGVKRIFIGVGGSASHDGGIGMAAGLGVKFYNRAGKEVEAIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGATFVFAGQKGLASAEFELVDKKIESFYKLVNPMLLNLAGAGAGGGMAAGLVQFAGARIQKGIDFVLDQLDFDHRVTKADLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKDDLPEFPFENICAAFPIIASVESLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN
>NZ_CP024974.1|WP_002939615.1|868494_869145_-|HAD-family-hydrolase
MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRFIGPPLYESFSRFYQLSPEDTQGAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKTLVIATSKPEIFAKQILEHFGIAHYFDVIAGASLDSSRISKADVIGHAINQLEAFPNHAVMIGDREHDIEGARRHQLPAIGVLYGYGSKQEFEKAGATMIVETVQDLKKVLLTTE
>NZ_CP024974.1|WP_002939614.1|867828_868464_+|phosphoserine-phosphatase-SerB
MTTGLLVMDVDSTLILEEGIDLLGEEAGLGAQVAAITERAMRGELDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHETVDRLAAQLELDYVRANRLEVVDGVLTGQVLGEIVTKDTKKACLEEWAAENGLSLSQTIAMGDGANDLPMIQRAGIGVAFCAKPIVQEQAPCQINEKNLYKLIEILDSK
>NZ_CP024974.1|WP_002939613.1|866052_867777_+|septation-ring-formation-regulator-EzrA
MPTGTIILIVSIVIILIIAYVACLIVRKRNDNLLVALEERKEELFNLPVNEEVEAVKALHLIGQSQVSFREWNQKWVDLSLNSFADIENHIFEAEGYNNAFRFVSAKNAIDSIESQIDLIEEDIASIRHGLMELKEQEEKNSGRVKHALNLFDSLQEAVRENPDSYGETLPELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKAEEHMIALNQIMDRIPSLIERVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIVSFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDEESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILKERLDHSLASLKEIEEEQLVLADYLKSQELSENTARKKATLYINKLHTLKRYMEKRNLPGIPAEFLTNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQLLQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYEKTREAIRY
>NZ_CP024974.1|WP_002939427.1|864011_865964_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVVADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKREGVEQTKEYHYEGGIASYVEYLNENKDVIFETPIYTEGEMDDITVEVAMQYTTSYHENVVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLADCSSNDATKTELFIVEGDSAGGSAKSGRDREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQELQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDV
>NZ_CP024974.1|WP_002939612.1|863290_863830_+|DJ-1/PfpI-family-protein
MTRVAVVLADGFEEIEALAPVDVFRRAHFDCQIIGLDSHEVEGSHGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICAAPIVLDKAGLLDSRHYTCFPGKEKDIPSGIHLEEDVVVDGPIITSRGAGTSLDFAYKLVDLFGGDGESLAQTMVYHR
>NZ_CP024974.1|WP_164071437.1|862056_863277_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPDNVVQMVGQQIAWIGIGTVAAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLVASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKHYPNRKIREDFMLIGYMTLFTIPVLILLALQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIFISPGGTTFLHNLGMDTYKINRIAAWLDPFKNAQSTTYQQAQSLIAIGSGGLKGLGFNKTNLLIPVRESDMIFTVIGEDFGFIGGTVLIVLYLLLIYRMLRVTLKSNNRYYTYISTGYIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGVGLVLSMGYQSRLADEKETNRSRRYRKITIKR
>NZ_CP024974.1|WP_002939627.1|873426_873819_-|hypothetical-protein
MTKFNLQSTQIYSELSKFEIEEILYNATKRLNGSVQRQNSEEISYSGQGNFFDYIKHPGLSRYTCWQVLVTVSDLDNKRKVELTAVGESPISYLINNFLSIITFDTLFQGHRNLNFGISKEKAKYFSNLL
>NZ_CP024974.1|WP_002939628.1|873835_875212_-|hypothetical-protein
MKLEDFQTYPFKSVQEYILDKEKAVKFSFLLQGDEPDRSELTKFIYKEIFEWYDDKEHSGDTLITYRTAIFRKYYGKSYKYLPRETQKEILEVIQSHTNHDKDFPFEFELGVNGNLVNQICNNYQIGNFGIFPKGKINPARAQSPYNDFFDLALSVIWELYDGTLTPDDDFKKAVLDEKEYFDQFEDFETFISENFLSAFFDEEGYLIRLSEIDDFEEYVRVSNQIIYTRGLTILTYLQSRYDNSSELPIQQLVEEKPKPRPTTKESAYRTLEIVEEEIDKISKLDEHFNDIDVSLRTVKFEATKKRIHGSIVILLFILFLFFINSEIIFFIWILSIILYVADKIRMIKERMKYDKILNKHQEKYREEKKKLLATLQKEYFSIPSEFRTYNHVSGIRYFLNADIASNLQQAIHYYSNEYNSKMLKEEIYNLHHSNTILQDRIMELELEKERRELERYK
>NZ_CP024974.1|WP_033875299.1|875327_875540_+|helix-turn-helix-domain-containing-protein
MISYKPFYETLFKQGKTEYELIFHHGLSSNTLHRMKKGKPITTATLDTLCFILNCNVSDVITYVPDEGEE
>NZ_CP024974.1|WP_002939630.1|875547_876210_+|hypothetical-protein
MPITKFKNSCHIIFKNCSERIQKVYEDYGYQSNISFYPNDEKLIGNILSYSSLDKLRAEYLITPGVINFLVKQEHYFHDENELLWGDNIDDYLEDFFIAMILDIQEIPEYAKHLLNLSLLDTNSIKGYFQVNFSFGSSNYDELKDKFIDFTYNQFDTIEILEEDSIFSFIEKDSVLLSSKNKDTFLTFKYLPDKLELLAKYVLLPIIDKITLENLINKND
>NZ_CP024974.1|WP_000026310.1|876386_876824_+|hypothetical-protein
MSINIENVSFSSPSLKNLLIGTSNVEHIPTTAFVIECRDIPKRNEKNEVIDGTISKKVLSALQPEIVKAIQEVGGDLSTIKPFTIEVQNDEASLKKLNNEAIIAKTIDLDEALLALKWVSDGRNSGAYREFKLIISEVKLLGGKS
>NZ_CP024974.1|WP_002939638.1|876820_878230_+|cell-division-protein-FtsK
MILNKIKRNFSRYDFREGSPTYLSISETIEVRKGKQSAILKKLFKVLLLSLPITFLSSMLPILNVVYKIGIIVSSALVALFIGHIGMRLLFSVYSPIWKYRFLSILELATERLDLIQLPSNKTQIKTVEWKFYKEADRIVIKLNPSGTIPSIQQVKEISRRLTEFLIQATHEEWNLLESTIDSNIVVLKYGENPIRYSVSELFEITDDDYCVNHNPIKLYDNIFFDIASEASHQIIIAPSGAGKSLYLATLAGLLIKQGHSVSLIDAKQTSLGATFENLGIPVARNAEEIVLLLEQMVFEMEDIYKRYFSFSSVDFSTTYKDFSLPAHYLIFDEVLAALESGTPAQQKEMVRLLKILALKSRASGRGLLILASQKLLASDLPRAITEQCQTRIILASDASISEETFYSIMGKEKKDLLVEYRGGVGKGYILTPKTNGIKYFETPYFDLNSRDFKDKIRDFQTIPRKQIE
>NZ_CP024974.1|WP_002939641.1|878331_879171_+|hypothetical-protein
MTREVYNTKIVQYSSNTFEIIHYRNPKIRRLGENGIKDTTPSCKKPSYDELYQQSHRIKRRIRHYLLCNDFDLFWTLTFDDAKINSHDYLIVKKKIRTWLKAQREKYGKFRYIFIPELHKNGRLHFHGVTGGFRPILTKARNTKTGRLIKKNGKQVYNVDSYQLGFSTVTKIDSSEKVANYITKYITKDLLAIPSGYKQPKYFSSRGLVKPTISYENLERNYFEGLTPSFSAGHLDNLEYKEDIAIYNISINDNGEIIQNTTDTIIKIRKEQGVYEAVD
>NZ_CP024974.1|WP_002939655.1|879154_879349_+|DUF3173-family-protein
MKPLISKEDLIKLGYKKHTAISIIQAVKQDLVYNKGVPFYNNRRLGLVPRKNVENLIGVELDED
>NZ_CP024974.1|WP_002939658.1|879352_880579_+|site-specific-integrase
MAKTRYSGVFIDAKGKYFYETELGIDKISGKRIRKKSRKDSNGKSFTTAREAYLELTRIKREYHKAHAYANYNMTVKQFILDCYIPYYKSYVEESTYAVRIKNLEKIADRFDNRTLRGLTIEDIQNYRIWLLSSKDENGSGYSQTYASLIFGMLRKSLDYAVEMGYLENNISKKAKAIPKGKAIVPYWTKTEFERVISQICLDDFYEHLNFVMLWTFFTTGIRVNEGMALWWNDIDFTKKRMRVHHMLILKSRKNWQRNAYTKTTDGKRIISLDDDTISILKHWQERQKEVGLGNETDFIFTYDSLPMIKSTLARIIRRYSELASVKQIQGKGLRHSNASYLINEFNVSVLILSKRLGHSSPEITLKHYSHLWSGADESIAEIMSGNISIHTAPKTKIQFNGNQNLKR
>NZ_CP024974.1|WP_002939665.1|881058_881208_-|hypothetical-protein
MIANKDFDGAKQFIEENKDQFGEYLEQAKGLLSGSEGVNGLLDKVKGLF

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Crispr_ID: NZ_CP024974_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024974_3

1619193-1619271

Orphan

Consensus_repeat	Method
AAAGGTTTGGGGAACCTTTGGTGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024974_3

>merge|NZ_CP024974|3|1619193-1619271|CRISPRCasFinder
AAAGGTTTGGGGAACCTTTGGTGGTGGGAAATAAAGCGAACGAAGTTCGCTACAAAAGGTTTGGGGAACCTTTGGAGGT

>NZ_CP024974|3|3|1619193-1619271|CRISPRCasFinder
AAAGGTTTGGGGAACCTTTGGTGGT	GGGAAATAAAGCGAACGAAGTTCGCTACA
AAAGGTTTGGGGAACCTTTGGAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024974.1\|WP_002940559.1\|1628285_1628456_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002940536.1\|1616004_1616859_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP024974.1\|WP_002940520.1\|1610078_1611284_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_CP024974.1\|WP_002940553.1\|1626881_1627541_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP024974.1\|WP_033875409.1\|1620962_1622861_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP024974.1\|WP_123921726.1\|1628524_1629643_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002940534.1\|1613945_1615298_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP024974.1\|WP_002940549.1\|1622922_1623999_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350690
NZ_CP024974.1\|WP_002940551.1\|1626213_1626507_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002940556.1\|1627767_1628265_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002940519.1\|1608577_1609978_-\|dipeptidase-PepV	unknown	unknown	gnl\|CDD\|235988
NZ_CP024974.1\|WP_002940522.1\|1611444_1612221_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP024974.1\|WP_002940563.1\|1630229_1630598_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024974.1\|WP_002940546.1\|1620299_1620776_-\|DUF3955-domain-containing-protein	unknown	unknown	gnl\|CDD\|379038
NZ_CP024974.1\|WP_002940545.1\|1619470_1620298_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|236841
NZ_CP024974.1\|WP_002940535.1\|1615310_1616015_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
NZ_CP024974.1\|WP_002940537.1\|1617038_1618382_+\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP024974.1\|WP_002940517.1\|1607916_1608375_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP024974.1\|WP_002940532.1\|1612351_1613896_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP024974.1\|WP_002940538.1\|1618381_1619170_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974

Protein	Function_ID	Function_description	E-value
NZ_CP024974.1\|WP_002940536.1\|1616004_1616859_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	6.17858e-94
NZ_CP024974.1\|WP_002940520.1\|1610078_1611284_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_CP024974.1\|WP_002940553.1\|1626881_1627541_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	9.26382e-36
NZ_CP024974.1\|WP_033875409.1\|1620962_1622861_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP024974.1\|WP_002940534.1\|1613945_1615298_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP024974.1\|WP_002940549.1\|1622922_1623999_-\|AAA-family-ATPase	gnl\|CDD\|350690	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. UvrD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.38849e-13
NZ_CP024974.1\|WP_002940519.1\|1608577_1609978_-\|dipeptidase-PepV	gnl\|CDD\|235988	PRK07318, PRK07318, dipeptidase PepV; Reviewed.	0
NZ_CP024974.1\|WP_002940522.1\|1611444_1612221_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.7729e-18
NZ_CP024974.1\|WP_002940546.1\|1620299_1620776_-\|DUF3955-domain-containing-protein	gnl\|CDD\|379038	pfam13127, DUF3955, Protein of unknown function (DUF3955). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 68 and 87 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	1.39084e-18
NZ_CP024974.1\|WP_002940545.1\|1619470_1620298_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|236841	PRK11088, rrmA, 23S rRNA methyltransferase A; Provisional.	8.56809e-45
NZ_CP024974.1\|WP_002940535.1\|1615310_1616015_-\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	2.08776e-50
NZ_CP024974.1\|WP_002940537.1\|1617038_1618382_+\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	1.02256e-95
NZ_CP024974.1\|WP_002940517.1\|1607916_1608375_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.58733e-10
NZ_CP024974.1\|WP_002940532.1\|1612351_1613896_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP024974.1\|WP_002940538.1\|1618381_1619170_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.09987e-129

>NZ_CP024974.1|WP_002940538.1|1618381_1619170_+|type-1-glutamine-amidotransferase
MVYTSLKSPEKDYTYNLHIAHLYGDLMNTYGDNGNILMLKYVAEKLGARVQVDIVSLTDNFDKDFYDIAFFGGGQDYEQSILAKDLPIKKDSLADFIENDGVMLAICGGFQLLGQYYIEAGGRKIDGLGIMGHYTLNQTNNRYIGDIKIHNDEFNETYYGFENHQGRTFLADNQKPLGKVVYGNGNNKEDGGEGLHYKNTFGSYFHGPILSRNANLAYRLVTTALRKKYGQDIQLASYADILSKEVAEEYGDVKSKAEFDTQ
>NZ_CP024974.1|WP_002940537.1|1617038_1618382_+|Mur-ligase-family-protein
MKINTALGILAGKSSQFILKKWGRGTTLPGKIALKFDKHILDSLAKDYEVVVVTGTNGKTLTTALTVGILQEAFGEITTNTSGANMMTGITATFLSAKKNKNGKKIAVLEIDEASLARVTDFIKPSLIVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPEATILANGDSPLFNSTTVINPVKYYGFATEEHVPRLAHYNTEGVLCPHCHQIIQYKLNTYANLGSYICNNCGFCRPELDYKLTDLKEITNTSSTFAIDGQDYKINIGGLYNIYNALAAVSVAEFFGVSPEKIKAGFDKSKAVFGRQETFKLGDKDCTLVLIKNPVGATQAIEMIKLAPYDFSLSVLLNANYADGIDTSWIWDADFEQITQMDIPQVFAGGVRSSEIARRLRVTGYPENQITETPKLEDILTLIEQSSSQHAYILATYTAMLEFRDLLAQRQAVGKEMK
>NZ_CP024974.1|WP_002940536.1|1616004_1616859_-|TIGR00159-family-protein
MLNLNQLLDTGYWSSLIASPWTALLHLIDISIVVYLIYNFSKSIAGTKIMTLIRGVFLFIIVQIIASLFGLQTIAWLINQVITYGVIAAVVIFAPELRAMLEKLGRTTQIFGTNTVSAEEKLIVAFLKSVAYMSPRKIGALVAVEQAQTLQEYRATGIPLNADISQELLINIFIPNTPLHDGAVIVKEDKVAVACAYLPLSESAGISKEFGTRHRAAIGLSEVSDAFVFIVSEETGSISIARNGIFKHDLTLDEFEAELRATFISENVEKKSIWKRLGGGKHER
>NZ_CP024974.1|WP_002940535.1|1615310_1616015_-|hypothetical-protein
MNDKFKAVGHLALSIFLALLLFFYATTTNYKNSETAAQNTESETYVHTLSNVPIEIEYDTNKYFISGFSSTVAVELRGSNRVLLQRESDESTRTFQVTADLRELSDGTQTVKLQLTNLPAGVSATLAPDAITVKIGKKVSKAFPVAGRVYSNQLAEGYSLSKVSVNVDTVKVTTDEETMAKIDQVEAVAMDVSNLSENYSGTAKLQAVDSDGNVLPVVLSQTEANMQIILTKTK
>NZ_CP024974.1|WP_002940534.1|1613945_1615298_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETDVPRVFVARDTRISGQMLEAALIAGLLSVGIHVYKLGVLATPGVAHLVKTEKASAGVMISASHNPAQDNGIKFFAGDGFKLDDALEAEIEALLDAEEDTLPRPSAQGLGDVVEYPEGLRKYESFLVSTGIQLEGMKVALDTANGAASTSARQIFADLGADLTVMAEKPDGLNINEGVGSTHPEKLQELVKETGSQIGLAFDGDSDRLIAVDENGDLVDGDRIMYIVGKYLADRGLLAKNTIVTTVMSNLGFHKALDREGIEKAVTAVGDRYVVEEMRKEGYNVGGEQSGHVILMDYNTTGDGQLTAVQLTKIMKETGKKLSELVAEVTIYPQKLVNIRVENSMKDKAMEVPAIAAIIEKMEAEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYFVDTIADVVRAEIGLD
>NZ_CP024974.1|WP_002940532.1|1612351_1613896_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILEVKNLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGQLQPDEGKVEWSRYVTAGYLDQHAKLEKGQSVRDVLRTAFDELFKTEARINDIYMSMAEEGADMDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDYGMDKDVTELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQLLTRYTGDYYQFQEVHAMKRAQLEAAYERQQKEIADLQDFVNRNKARVATRNMAMSRQKKLDKMEIIELQAEKPKPSFDFKMARTPSRFIFQTTDLEIGYDRVLTRKPLNLTFERNQKIAIVGANGIGKSTLLKSLLGIIPPLGGSVERGEYLELGYFEQEVAGGNRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKRALQDYKGSILMVCHEPDFYEGWVDDVWDFNELT
>NZ_CP024974.1|WP_002940522.1|1611444_1612221_-|class-I-SAM-dependent-methyltransferase
MTDYVNYNQERWNRVSARQGNAYTVPLSHEEFLVAKDKPLSVSLTVGKTVPLDWFERAQGKKLLGLACGGGQQGPIFAAHGYQTTIMDFSKEQLDKDRLVAERENLNLQTVQADMTQPFPFEDETFDIIFCPVSNVYIEDLTNMWQESYRVLKKGGLLMVGYMNPWIYVFDADDVWEHPDIALVPKYSLPFNARQLEEAGQLTIDPEYGYEFSHTLEEQIAGQLRAGFAMIDFYESRDCRNRLSQFGTDYLANLSVKL
>NZ_CP024974.1|WP_002940520.1|1610078_1611284_-|serine/threonine-transporter-SstT
MNNIISVWKKMNLIRKIGIGVVLGVLLGLIAPKIAVIALFGSLFVGALKAIAPLLVLTLVAHALSQAPAGQKSNMRTVICLYLFGTFAAAFIAVGASYLFPIKLVLSTTTTTDITPPQGIAEVFQALLLKVVDNPINALATANYIGVLTWAAVFGLAFRNASQHTKDLLQSTAEVTSKVVSWIIGLAPFGIMGLVFDTIANNGLTALKDYGLLLLLLVGSMAFVALVVNPLIAFLVMKKNPYPLVFECLRVSGVTAFFTRSSAANIPVNMQLCKRLGVDPDTYSVSIPLGATINMAGAAITINILTMAAVHTLGISVDFSSALLLSVVASLSAAGASGIAGGSLLLIPVACSLFGIPNELAMQVVGVGFVVGVIQDSCETALNSSTDVLFTVVAERSTWKK
>NZ_CP024974.1|WP_002940519.1|1608577_1609978_-|dipeptidase-PepV
MTVNFRAEFDKRKDEFLADLFDLLRINSERDDSQADAQHPFGPGPVRALDKFLEIAQRDGYPTKNVDNYAGHFEFGEGDEVLGIFGHLDVVPAGSGWNTDPYEPQIIDGKLFARGSSDDKGPTMACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLPLPDFGFSPDAEFPIINGEKGNITAYLHFAGENSGAAKLHSFTGGLRENMVPESATAIISGDLADLDSKLADFTAAYGLKADAETLENGQIQVTVIGKSAHGSTPEEGVNGATYLAKFLSQFAFEGAAKNYLDLAGQVLLEDHDAQKLGVAIYDEQMGALSMNAGVFKFAETSSDNTIALNFRYPKNTNPETIKAGLEKLGVEAVSLSEHGHTPHYCPIDDPMVATLLSVYEKHTGLKGHEQVIGGGTFGRLLERGVAYGAMFPGDVNTMHQANEFIEVEQLYRAAAIYAEAIYELIK
>NZ_CP024974.1|WP_002940517.1|1607916_1608375_-|GNAT-family-N-acetyltransferase
MELKELTLADMEMVKELFLSVFSQEPWNDDWSDEEQLDCYIGDLLGHSRALCFGLFDQEKLIGLSLGYIRYWYEGTEYRIEEFCISRDYQGRGIGKDFLKRIEEQLVERKIVHILLQTERNLPAYFFYQKYGFRALEEDVTMVKKVGHHGTC
>NZ_CP024974.1|WP_002940545.1|1619470_1620298_-|methyltransferase-domain-containing-protein
MTKHPRFLNSDQFFACPHCGQSLGLDLNSLRCPNRHTFDIAKQGYVNLAPQVKQSANYHKSSFENRQTFLEAGYYDHLYEALEGKIAELGLRSVLDIGCGEGFYSRKLAEKMNLDILAFDISKDSILLAAKSDRTKSVKWFVGDLTKLPIQDRTIDGILDIFSPANYQEFARVLKTGGAILKLVPSPNHLKELRHLAKDQLRKESYDNQDIVDHFKSYVEQVEQVLVSRTLPIGIEQARILADMTPLFFQVDQSKLDLSQLTEITVEAVLLVGTI
>NZ_CP024974.1|WP_002940546.1|1620299_1620776_-|DUF3955-domain-containing-protein
MNFGQQIKDLRKKEGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILMSSVFSISLDQLISGGTDMNNMTEKLVKDGREGRRTQMHLTITIIGSFLMVLGLVCFLIKANSVEYIDAEGILHENFYLIPVGYLLVFTGALATLLSGLALHHFRKENK
>NZ_CP024974.1|WP_033875409.1|1620962_1622861_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MIILSGNKIERSFAGEVLFNNINIQVDERDRIALVGKNGAGKSTLLKILVGEEAATSGDISTKRDLSLSYLAQDSRFESENTIYDEMLHVFDDLRTTEKRLRSMEEQMGSLSGSDLDQLMKTYDSLSEEFRLAGGFSYEADIRAILNGFKFDQTMWDMKISELSGGQNTRLALAKMLLESPELLVLDEPTNHLDIDTIAWLENYLVNYKGALIIVSHDRYFLDKVATMTLDLTKHSLDRYVGNYSQFVELKEQKLQTEMQNYEKQQKEIAKLEDFVQKNIVRASTTKRAQARRKKLEKMDRLDKPTAHSKSANMTFQSDKTSGNIVLTVENAAVGYDGDILSQPISIDQRKLDAIAIVGPNGIGKTTLLKSIVGALPFIKGEAKLGANVEVGYYDQTQSALAPSNTVLEELWSAFPTTPEVEIRNRLGAFLFSGDDVKKSVSMLSGGEKARLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIEFDGTLLFVSHDRYFINRVATKVLEISETGSTLYLGDYDYYLEKKAEQEAEAQPDQLESTSQSVGAMDYQAQKENQKEQRKLARRIEQIEAEIDTIENSLSELNQAMLETNDIGQLTDYQKEIDQLTAQQENLMEEWEELSEQLG
>NZ_CP024974.1|WP_002940549.1|1622922_1623999_-|AAA-family-ATPase
MDKRVVLASAGAGKTYFIANDFSDKERVYLITFTHRNVENIRKELLKRFDGMIPENIRISTFDSFVYNQLVRPFEPVANFPGIKSRGVEVNIEPSTDPRDYGTYFKLDNPKHFLLNDRFYVTRLSKFFMKQGRDFKKNALVRLKYFCDTIYIDEFQDYNGWDFKLIEYLMKSSETNVVAVGDIFQSLVANIRRDGNGSDLPFSIISSVDDLSQKLPKKVIIDTTTLVKSRRVAPKVCSFINNHLGIPIESSSDSNGEIKWLDNISDATLILMNSNIPKLVWDNRFKCPGVSNFINWSYSKGDTYPKTCIILTKPTSTLSNWDTLSNEVRNKLYVALTRSLGDVYLISSTIFAEYKNSI
>NZ_CP024974.1|WP_002940551.1|1626213_1626507_-|hypothetical-protein
MPRLEKTGMIQVSEGVIQPVLDSALENLMYSSATMFINPNLFTIIVFMVNVVLVAVLIYLKCQMVFLVESSSNEVPEASSTSRKSKKKPRRFHRHGN
>NZ_CP024974.1|WP_002940553.1|1626881_1627541_+|recombinase-family-protein
MKKIIKQYQEKGSIIIGYARVSSTDNRQELGLEVQKEALNFCDKLYIEKESGGNQERPQLQKALKLAKECAESGIKTSFVVYKLDRLTRKMLHLSAIISELTSYNIRLQSIHEQIETDSLTGKFFCLMLGYVAEWELQAISARTKDGLRKAKERGVKLGNKGISKSKEKQIIISYLEEGMTIRDIASQFQISTATIYSVLKRNNIKTNRKINPKIVDKI
>NZ_CP024974.1|WP_002940556.1|1627767_1628265_+|hypothetical-protein
MEKIIIACIIGVFIYCIRNFFIGRRRDELLNQGAIESRDKLFLSQEHCFFSSKISSVQEILSVLDMGSFKDNHIQLLNITDDGDAVFKITNNIIVKESYVLALLASEIRNDEKAYVFVIINTYNCEKSIIENPYNILLTQVERAIKKLDSNATVERRVIQYHTTK
>NZ_CP024974.1|WP_002940559.1|1628285_1628456_+|hypothetical-protein
MNAETLYVILAIGLIIGAYILKHILMKGVYHLEDSYKNKRNQAKQNSTNSDKREKL
>NZ_CP024974.1|WP_123921726.1|1628524_1629643_+|hypothetical-protein
MKKIQKILASIIAFYVLLLTLSCNTVFAEPTPLSLYEDNNIRFAPLATGAENPENRYGIIGNRDRKYDDDVRAFLLKGVVGSTVKDLVIYLKPGESFTIDSPTIPGRTINSVMHDSVRGNQFVTVDDKIPLPLTISYDDLVERGPFNNDEQIVSYSDRYILRGENDPRFEDPFIHLDGYYVLDYDGSKFNTDFALRVFDSFSWGYAGGAQSVPFNMYVLEGEVLPLPESLYGQTLTGIAFVRSKYAYAVTDVYTNNIVYSDIHNQYDDAILFMFYSEGSSNFDLSSNGQSWEALDFNKVPGVQEKLDEIEADKVASETEESTSAEESEDTQYIDEESTETKSNSVNGMVVVVGILIVLSAISFITFSNKRNK
>NZ_CP024974.1|WP_002940563.1|1630229_1630598_+|hypothetical-protein
MNDYKAKQELITLSEEIHQHTFWGLIPETAKWGCTELGAYLPVISLPAFISSLTVKNGVMSYAVTCFEQFTKHTEIYEINATLWEFMVKLQAVIDSKTEKEFCRNLLEILHTEVYFTKEWDD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024974_1	1.1\|756399\|29\|NZ_CP024974\|CRISPRCasFinder	756399-756427	29	NZ_CP024974.1	756067-756095	2	0.931

1. spacer 1.1|756399|29|NZ_CP024974|CRISPRCasFinder matches to position: 756067-756095, mismatch: 2, identity: 0.931

actgtttcgttaaattgaacccgcctaac	CRISPR spacer
actggtccgttaaattgaacccgcctaac	Protospacer
**** *.**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024974_3	3.1\|1619218\|29\|NZ_CP024974\|CRISPRCasFinder	1619218-1619246	29	MN270270	Streptococcus phage phi-SsuJS7_SSU0237, partial genome	5316-5344	5	0.828
NZ_CP024974_3	3.1\|1619218\|29\|NZ_CP024974\|CRISPRCasFinder	1619218-1619246	29	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	250725-250753	7	0.759

1. spacer 3.1|1619218|29|NZ_CP024974|CRISPRCasFinder matches to MN270270 (Streptococcus phage phi-SsuJS7_SSU0237, partial genome) position: , mismatch: 5, identity: 0.828

gggaaataaagcgaacgaagttcgctaca	CRISPR spacer
tggaaataaagcgaacaacgttcgcatca	Protospacer
 ***************.* ******  **

2. spacer 3.1|1619218|29|NZ_CP024974|CRISPRCasFinder matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

gggaaataaagcgaacgaagttcgctaca	CRISPR spacer
aggaaataaagcgagagaagttcgtatct	Protospacer
.*************. ********.  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34578 : 49563

Synechococcus_phage(22.22%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004195391.1\|34578_35454_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-28	37.0
WP_004195393.1\|35455_36229_+	hypothetical protein	NA	NA	NA	NA
WP_004195395.1\|36351_37359_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_004195397.1\|37351_37600_+	acyl carrier protein	NA	NA	NA	NA
WP_004195398.1\|37717_38425_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	2.7e-42	41.7
WP_024378576.1\|38437_42157_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.3e-38	26.4
WP_004195403.1\|42159_43614_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.7e-57	34.2
WP_004195405.1\|43669_44692_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	6.0e-59	42.7
WP_004195407.1\|44688_45258_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.4e-27	38.0
WP_004195409.1\|45239_46313_+	hypothetical protein	NA	NA	NA	NA
WP_004195412.1\|46315_47863_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.8e-73	47.3
WP_004195413.1\|47927_48758_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	3.5e-89	59.6
WP_032499218.1\|48747_49563_+	site-specific DNA-methyltransferase	A0A1W6JJW1	Lactococcus_phage	1.1e-26	33.5

DBSCAN-SWA_2

113609 : 162250

Streptococcus_phage(20.0%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004195537.1\|113609_114962_+\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	9.2e-15	29.9
WP_029186902.1\|115106_115430_-	hypothetical protein	NA	NA	NA	NA
WP_004195539.1\|115439_115829_-	hypothetical protein	NA	NA	NA	NA
WP_004195544.1\|115871_116186_-	hypothetical protein	NA	NA	NA	NA
WP_004195546.1\|116276_117596_-	otitis media-associated H10	A0A1S5SFB5	Streptococcus_phage	2.7e-35	30.6
WP_004195548.1\|117614_118373_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_004195552.1\|118630_119137_-	hypothetical protein	NA	NA	NA	NA
WP_004195554.1\|119665_120109_+	winged helix DNA-binding protein	NA	NA	NA	NA
WP_002936595.1\|120109_120814_+	metal ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-07	27.2
WP_004195557.1\|120806_121619_+	metal ABC transporter permease	NA	NA	NA	NA
WP_004195559.1\|121628_123143_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA
WP_004195561.1\|123245_123692_+	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_004195563.1\|123688_123898_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_004195566.1\|124246_125029_-	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_004195568.1\|125032_126289_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	6.6e-76	41.3
WP_004195570.1\|126442_128866_+	penicillin-binding protein	NA	NA	NA	NA
WP_004195572.1\|129639_133212_+	DNA-directed RNA polymerase subunit beta	A0A2P0VMZ3	Tetraselmis_virus	5.7e-40	26.7
WP_004195573.1\|133393_137041_+	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	4.8e-66	24.8
WP_100664708.1\|137601_138858_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.8e-129	56.8
WP_004195575.1\|139083_139449_+	DUF1033 family protein	NA	NA	NA	NA
WP_100664709.1\|139483_140434_-	LD-carboxypeptidase	NA	NA	NA	NA
WP_100664710.1\|140519_141470_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_032497882.1\|141390_142419_+	type II secretion system F family protein	NA	NA	NA	NA
WP_024377792.1\|142420_142702_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_100664711.1\|142682_143090_+	type II secretion system protein	NA	NA	NA	NA
WP_044765771.1\|143061_143355_+	type II secretion pathway, pseudopilin PulG	NA	NA	NA	NA
WP_100664712.1\|143341_143776_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_100664713.1\|143753_144266_+	competence protein ComGG	NA	NA	NA	NA
WP_100664714.1\|144493_146575_+	DUF1906 domain-containing protein	D6PSS2	Lactobacillus_phage	3.6e-18	31.3
WP_100664715.1\|146780_147911_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_100664716.1\|148075_149386_+	hypothetical protein	NA	NA	NA	NA
WP_052819543.1\|150927_152133_+	hypothetical protein	NA	NA	NA	NA
WP_100664717.1\|152537_153491_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_100664718.1\|153541_154729_+	acetate kinase	NA	NA	NA	NA
WP_002939996.1\|154915_155380_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.8e-16	35.2
WP_002939998.1\|156103_156655_+	folate family ECF transporter S component	NA	NA	NA	NA
WP_002939999.1\|156710_157973_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_100664719.1\|158145_160851_+	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA
WP_002939996.1\|161000_161465_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.8e-16	35.2
WP_100198729.1\|162109_162250_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_3

475249 : 580831

109

Streptococcus_phage(89.04%)

terminase,tail,tRNA,integrase,transposase,portal,holin,capsid,head

attL 465896:465915|attR 535834:535853

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
465896:465915	attL	NA	NA	NA	NA
WP_100664741.1\|475249_476188_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.5e-08	31.8
WP_164071435.1\|476177_477488_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_004194145.1\|477525_478263_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_004195191.1\|478262_480257_+	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A1V0SDC3	Indivirus	3.2e-24	32.5
WP_004195189.1\|480536_481241_+	cell wall-active antibiotics response protein	NA	NA	NA	NA
WP_004195187.1\|481237_482254_+	sensor histidine kinase	NA	NA	NA	NA
WP_002937025.1\|482225_482867_+	response regulator transcription factor	NA	NA	NA	NA
WP_004195185.1\|482916_484317_+	Cof-type HAD-IIB family hydrolase	A0A1V0S9I2	Catovirus	3.9e-24	43.5
WP_002937017.1\|484318_484690_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_004195182.1\|484715_485642_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	9.9e-170	100.0
WP_100664743.1\|485871_487029_-\|integrase	site-specific integrase	A0A1X9I5L3	Streptococcus_phage	5.9e-220	100.0
WP_100664744.1\|487203_487638_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A1X9I6W9	Streptococcus_phage	6.7e-76	100.0
WP_100664745.1\|487876_488338_-	hypothetical protein	A0A1X9I6G5	Streptococcus_phage	5.1e-50	100.0
WP_100664746.1\|488401_489151_-	helix-turn-helix domain-containing protein	A0A1X9I5R4	Streptococcus_phage	2.3e-140	100.0
WP_014636685.1\|489527_489692_+	hypothetical protein	A0A1X9I5M0	Streptococcus_phage	3.5e-22	100.0
WP_024399172.1\|489708_489915_+	helix-turn-helix transcriptional regulator	A0A1X9I5S3	Streptococcus_phage	9.9e-30	100.0
WP_100664747.1\|490116_490446_+	hypothetical protein	A0A1X9I639	Streptococcus_phage	2.8e-58	100.0
WP_024398867.1\|490736_490952_+	hypothetical protein	A0A1X9I5L4	Streptococcus_phage	1.0e-32	100.0
WP_004195142.1\|490967_491138_+	hypothetical protein	A0A1X9I5M4	Streptococcus_phage	1.5e-23	100.0
WP_004195139.1\|491128_491368_-	hypothetical protein	A0A1X9I5M1	Streptococcus_phage	5.3e-43	100.0
WP_004195135.1\|491795_492017_+	hypothetical protein	A0A1X9I662	Streptococcus_phage	1.3e-32	100.0
WP_004195133.1\|492113_492794_-	DUF4145 domain-containing protein	A0A1X9I5M7	Streptococcus_phage	1.1e-125	100.0
WP_002936992.1\|492910_493165_+	hypothetical protein	A0A1X9I5T3	Streptococcus_phage	7.4e-43	100.0
WP_004195128.1\|493205_493463_+	hypothetical protein	A0A1X9I643	Streptococcus_phage	7.0e-41	100.0
WP_004195126.1\|493443_493638_+	hypothetical protein	A0A1X9I5L8	Streptococcus_phage	2.5e-27	100.0
WP_100664748.1\|493812_494178_+	transcriptional regulator	A0A1X9I5N3	Streptococcus_phage	6.4e-64	100.0
WP_004195119.1\|494439_494769_+	hypothetical protein	A0A1X9I5N1	Streptococcus_phage	9.9e-56	100.0
WP_004195117.1\|494775_494916_+	hypothetical protein	A0A1X9I6Y1	Streptococcus_phage	7.0e-19	100.0
WP_004195116.1\|495054_495234_+	hypothetical protein	A0A1X9I5S5	Streptococcus_phage	2.4e-24	100.0
WP_004195114.1\|495230_496142_+	recombinase RecT	A0A1X9I5N6	Streptococcus_phage	4.7e-140	100.0
WP_004195113.1\|496141_497356_+	DUF1351 domain-containing protein	A0A1X9I5T9	Streptococcus_phage	9.2e-224	100.0
WP_004195110.1\|497348_498185_+	nuclease	A0A1X9I655	Streptococcus_phage	1.7e-160	100.0
WP_004195107.1\|498527_498704_+	hypothetical protein	A0A1X9I5M8	Streptococcus_phage	1.7e-25	100.0
WP_004195105.1\|498826_499066_+	hypothetical protein	A0A1X9I5N0	Streptococcus_phage	8.8e-38	100.0
WP_004195103.1\|499067_499874_+	phage antirepressor KilAC domain-containing protein	A0A1X9I5P1	Streptococcus_phage	9.9e-150	100.0
WP_004195101.1\|499884_500334_+	RusA family crossover junction endodeoxyribonuclease	A0A1X9I5P2	Streptococcus_phage	3.8e-82	100.0
WP_004195099.1\|500330_501479_+	DNA cytosine methyltransferase	A0A1X9I6Y5	Streptococcus_phage	6.6e-224	100.0
WP_004195096.1\|501475_501682_+	hypothetical protein	A0A1X9I6I5	Streptococcus_phage	2.3e-34	100.0
WP_004195094.1\|501645_502200_+	hypothetical protein	A0A1X9I5U3	Streptococcus_phage	5.9e-101	100.0
WP_004195093.1\|502192_502684_+	DUF1642 domain-containing protein	A0A1X9I5P8	Streptococcus_phage	4.7e-94	100.0
WP_004195091.1\|502683_502854_+	DUF1653 domain-containing protein	A0A1X9I5U8	Streptococcus_phage	3.9e-24	100.0
WP_004195090.1\|502853_502997_+	hypothetical protein	A0A1X9I667	Streptococcus_phage	5.4e-19	100.0
WP_004195089.1\|502993_503206_+	hypothetical protein	A0A1X9I5N5	Streptococcus_phage	3.9e-37	100.0
WP_004195085.1\|503533_503947_+	DUF722 domain-containing protein	A0A1X9I5N8	Streptococcus_phage	1.8e-70	100.0
WP_004195082.1\|504392_504806_+\|terminase	phage terminase small subunit	A0A1X9I5Q8	Streptococcus_phage	2.6e-69	100.0
WP_004195080.1\|504795_506217_+\|terminase	phage terminase large subunit	A0A1X9I5Q1	Streptococcus_phage	2.4e-279	100.0
WP_033875465.1\|506228_507233_+\|portal	phage portal protein	A0A1X9I6Z0	Streptococcus_phage	8.2e-186	100.0
WP_004195079.1\|507919_509377_+\|capsid	minor capsid protein	A0A1X9I5V1	Streptococcus_phage	1.2e-233	100.0
WP_004195076.1\|509342_509549_+	hypothetical protein	A0A1X9I5Q7	Streptococcus_phage	1.3e-37	100.0
WP_004195074.1\|509727_509973_+	hypothetical protein	A0A1X9I5V3	Streptococcus_phage	2.1e-34	100.0
WP_004195073.1\|509984_510224_+	hypothetical protein	A0A1X9I676	Streptococcus_phage	1.0e-38	100.0
WP_004195071.1\|510382_510964_+	DUF4355 domain-containing protein	A0A1X9I5P5	Streptococcus_phage	1.8e-84	100.0
WP_004195070.1\|510970_511819_+\|capsid	N4-gp56 family major capsid protein	A0A1X9I5P6	Streptococcus_phage	3.1e-154	100.0
WP_004195069.1\|511818_511977_+	hypothetical protein	A0A1X9I5S4	Streptococcus_phage	6.4e-21	100.0
WP_004195067.1\|511966_512155_+	hypothetical protein	A0A1X9I5R0	Streptococcus_phage	7.2e-27	100.0
WP_004195065.1\|512164_512494_+\|head,tail	phage head-tail adapter protein	A0A1X9I6Z8	Streptococcus_phage	1.1e-51	100.0
WP_004195061.1\|512761_513274_+	HK97 gp10 family phage protein	A0A1X9I5W0	Streptococcus_phage	2.8e-89	100.0
WP_004195059.1\|513270_513639_+	hypothetical protein	A0A1X9I5R5	Streptococcus_phage	1.7e-64	100.0
WP_004195057.1\|513642_514059_+\|tail	tail protein	A0A1X9I5W3	Streptococcus_phage	1.6e-71	100.0
WP_004195056.1\|514071_514446_+	hypothetical protein	A0A1X9I685	Streptococcus_phage	2.4e-66	100.0
WP_024406156.1\|514544_514832_+	hypothetical protein	A0A1X9I5Q4	Streptococcus_phage	6.8e-45	98.9
WP_004195054.1\|518661_519012_+	hypothetical protein	A0A1X9I5R7	Streptococcus_phage	1.4e-60	100.0
WP_004195049.1\|523083_525276_+	phage protein	A0A1X9I6J8	Streptococcus_phage	0.0e+00	100.0
WP_004195047.1\|525287_525713_+	DUF1366 domain-containing protein	A0A1X9I5W8	Streptococcus_phage	1.2e-74	100.0
WP_004195045.1\|525716_525929_+	hypothetical protein	A0A1X9I5T1	Streptococcus_phage	2.6e-33	100.0
WP_004195044.1\|525932_526358_+	hypothetical protein	A0A1X9I5X4	Streptococcus_phage	1.4e-73	100.0
WP_004195043.1\|526361_526616_+\|holin	phage holin	A0A1X9I689	Streptococcus_phage	1.3e-44	100.0
WP_004195041.1\|526702_527389_+	CHAP domain-containing protein	A0A1X9I5R3	Streptococcus_phage	1.4e-131	100.0
WP_004195039.1\|527449_527827_+	hypothetical protein	A0A1X9I5S2	Streptococcus_phage	1.5e-63	100.0
WP_004195179.1\|528184_528817_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	3.8e-112	100.0
WP_004195177.1\|528873_530166_+	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	3.0e-249	100.0
WP_002941737.1\|530158_530824_+	ComF family protein	NA	NA	NA	NA
WP_002941735.1\|530901_531444_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100664749.1\|532352_533483_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_100664750.1\|540122_541343_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-123	56.3
535834:535853	attR	NA	NA	NA	NA
WP_004195625.1\|541776_543129_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	E4ZFI6	Streptococcus_phage	2.7e-75	34.4
WP_004195626.1\|543166_543943_+	recombination regulator RecX	NA	NA	NA	NA
WP_100664735.1\|544209_545373_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.2e-12	24.3
WP_002942711.1\|545569_546103_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_002942715.1\|546160_546478_+	DUF960 domain-containing protein	NA	NA	NA	NA
WP_002942716.1\|546577_547309_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_100664751.1\|547483_548740_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.4e-128	56.8
WP_015646515.1\|548869_549580_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_100664752.1\|549773_550937_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	4.3e-13	23.8
WP_004195631.1\|552277_554050_+	beta-galactosidase	NA	NA	NA	NA
WP_004195634.1\|554105_554591_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_024375914.1\|554629_555526_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_004195637.1\|555512_556331_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_004195639.1\|556330_556726_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_004298683.1\|557318_559022_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_004298686.1\|559127_560132_+	galactose mutarotase	NA	NA	NA	NA
WP_004298691.1\|560595_561543_-	malate permease	NA	NA	NA	NA
WP_004298694.1\|561556_563176_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_004298697.1\|563354_563708_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_164071412.1\|563992_564619_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_004298703.1\|564605_567137_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_004298708.1\|567770_568739_+	hypothetical protein	NA	NA	NA	NA
WP_004298711.1\|568862_570059_+	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	1.5e-32	28.2
WP_004298713.1\|570233_570986_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_004298717.1\|571039_571849_-	sugar-phosphatase	NA	NA	NA	NA
WP_002936179.1\|571838_573152_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	8.9e-31	33.9
WP_004298722.1\|573250_574138_+	anion permease	NA	NA	NA	NA
WP_004298723.1\|574149_574536_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_004298726.1\|575012_577697_+	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	4.7e-71	28.5
WP_024386317.1\|577962_578154_-	hypothetical protein	NA	NA	NA	NA
WP_004298731.1\|578246_578456_-	hypothetical protein	NA	NA	NA	NA
WP_004298733.1\|578589_579006_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_004298734.1\|579174_579663_+	VanZ family protein	NA	NA	NA	NA
WP_004298737.1\|579703_580831_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA

DBSCAN-SWA_4

598795 : 607674

Lactococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029185255.1\|598795_599623_+	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	2.4e-26	34.3
WP_099779905.1\|599615_600218_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_099779904.1\|600204_601410_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_012775228.1\|601409_601559_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_002935768.1\|601605_601839_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_100664755.1\|602373_604743_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.7e-93	40.8
WP_002935771.1\|604745_605213_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.7e-43	55.7
WP_100198753.1\|605489_605708_+	hypothetical protein	NA	NA	NA	NA
WP_002939996.1\|606112_606577_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	2.8e-16	35.2
WP_014637653.1\|607004_607187_+	type II toxin-antitoxin system HicA family toxin	A0A1X9I5W4	Streptococcus_phage	1.4e-27	98.3
WP_004298783.1\|607224_607674_+	type II toxin-antitoxin system HicB family antitoxin	A0A1X9I727	Streptococcus_phage	2.1e-72	88.7

DBSCAN-SWA_5

671671 : 739215

Streptococcus_phage(77.78%)

transposase,holin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004298885.1\|671671_672172_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_004298887.1\|672821_673880_-	phosphatidylinositol-specific phospholipase C	NA	NA	NA	NA
WP_004298888.1\|674560_676132_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-61	36.8
WP_002936205.1\|676278_676557_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004298890.1\|676543_677143_+	DUF1648 domain-containing protein	NA	NA	NA	NA
WP_004298892.1\|677253_677661_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004298894.1\|677783_678395_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_004298896.1\|678409_678682_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_004298898.1\|678671_679421_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_004298900.1\|679501_679753_-	hypothetical protein	NA	NA	NA	NA
WP_004298902.1\|679762_680017_-	hypothetical protein	NA	NA	NA	NA
WP_004298904.1\|680030_680297_-	hypothetical protein	NA	NA	NA	NA
WP_004298906.1\|680499_681591_+	cystathionine gamma-synthase	NA	NA	NA	NA
WP_004298907.1\|681594_682755_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_002937318.1\|682786_683626_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004298910.1\|683731_685906_+	alpha-galactosidase	NA	NA	NA	NA
WP_004298912.1\|685918_687151_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004298914.1\|687210_688227_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_004298917.1\|689160_690399_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004298918.1\|690546_691419_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004298919.1\|691429_692260_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004298920.1\|692329_693778_+	sucrose phosphorylase	NA	NA	NA	NA
WP_100664761.1\|693851_695468_+	alpha-glucosidase	NA	NA	NA	NA
WP_099779813.1\|695550_696180_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002937303.1\|696301_696892_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.5e-54	56.7
WP_002937299.1\|697018_697291_+	YlbG family protein	NA	NA	NA	NA
WP_004298924.1\|697422_698592_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024376797.1\|700632_701397_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.1e-16	26.3
WP_002937288.1\|701396_702107_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-16	27.7
WP_100664727.1\|702419_703796_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	9.0e-268	96.9
WP_024376798.1\|704157_704913_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_024377199.1\|705009_705666_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.7e-113	99.1
WP_024398539.1\|706186_707014_+	hypothetical protein	M1PFV6	Streptococcus_phage	1.0e-133	98.5
WP_029177810.1\|707019_708291_+	toxic anion resistance protein	M1PLC8	Streptococcus_phage	1.6e-207	98.3
WP_024379692.1\|708327_709194_-	YitT family protein	M1Q1P6	Streptococcus_phage	1.5e-151	98.3
WP_024379691.1\|709368_710007_+	dTMP kinase	M1PSC7	Streptococcus_phage	5.3e-114	99.1
WP_024418526.1\|710003_710888_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.3e-155	99.7
WP_004298942.1\|710907_711225_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.2e-54	99.0
WP_100664762.1\|711226_712093_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	9.3e-146	92.7
WP_100664763.1\|712212_713304_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	8.6e-205	98.6
WP_099778955.1\|714123_715305_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.5e-215	96.9
WP_099778956.1\|715306_715801_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.8e-77	84.0
WP_024379686.1\|715797_716151_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.3e-58	95.7
WP_164071413.1\|716487_724875_+	hypothetical protein	NA	NA	NA	NA
WP_004298957.1\|725056_727051_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
WP_100664765.1\|727074_727938_+	hypothetical protein	NA	NA	NA	NA
WP_004298961.1\|728123_729074_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_100664766.1\|729273_730104_+	class C sortase	NA	NA	NA	NA
WP_044766177.1\|730100_730958_+	class C sortase	NA	NA	NA	NA
WP_100664767.1\|730954_731806_+	class C sortase	NA	NA	NA	NA
WP_029174240.1\|731898_732726_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.5e-148	98.2
WP_004298972.1\|732881_734543_+	hypothetical protein	NA	NA	NA	NA
WP_004298974.1\|734702_736091_+	amino acid permease	NA	NA	NA	NA
WP_004298976.1\|736202_737084_+	DUF975 family protein	NA	NA	NA	NA
WP_004298978.1\|737195_738077_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004298981.1\|738190_738790_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_079255321.1\|739122_739215_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_6

1103968 : 1146343

Lactobacillus_prophage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100664735.1\|1103968_1105132_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.2e-12	24.3
WP_002940432.1\|1105337_1106489_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_002940433.1\|1107028_1108309_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_002940435.1\|1108386_1109919_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	6.3e-28	23.0
WP_002940437.1\|1110220_1110712_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002940438.1\|1110768_1111509_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-32	40.1
WP_002940440.1\|1111508_1113707_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_002940442.1\|1113904_1115890_+	excinuclease ABC subunit B	NA	NA	NA	NA
WP_164071418.1\|1116504_1123647_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_004195537.1\|1123832_1125185_-\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	9.2e-15	29.9
WP_002941576.1\|1125138_1125345_-	hypothetical protein	NA	NA	NA	NA
WP_002942274.1\|1125727_1125913_-	hypothetical protein	NA	NA	NA	NA
WP_002942976.1\|1126017_1126521_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002942978.1\|1126704_1127754_+	hypothetical protein	Q6SE88	Lactobacillus_prophage	3.7e-88	46.3
WP_002942979.1\|1127731_1128115_+	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	3.7e-30	50.0
WP_002942987.1\|1128998_1129772_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_002942989.1\|1129761_1130391_+	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_000048054.1\|1130488_1130665_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_002942991.1\|1130769_1131783_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	4.8e-93	49.8
WP_002942992.1\|1131862_1132246_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_002942995.1\|1132427_1134218_+	DNA primase	A0A1S5RFR1	Helicobacter_phage	1.3e-48	32.5
WP_002935555.1\|1134220_1135339_+	RNA polymerase sigma factor RpoD	M4SMP8	Cyanophage	7.3e-34	34.1
WP_002942999.1\|1135943_1136267_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_164071419.1\|1136309_1136768_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002939741.1\|1137296_1138166_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.0e-99	61.1
WP_002939744.1\|1138165_1138759_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	5.1e-10	33.1
WP_002939749.1\|1138758_1139244_+	hypothetical protein	NA	NA	NA	NA
WP_002939751.1\|1139419_1140466_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.0e-69	44.2
WP_002939753.1\|1140520_1141372_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.6e-25	34.4
WP_002939754.1\|1141548_1141755_+	hypothetical protein	NA	NA	NA	NA
WP_164071438.1\|1142403_1143696_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.0e-212	93.5
WP_164071420.1\|1143948_1144203_+	hypothetical protein	NA	NA	NA	NA
WP_164071421.1\|1144319_1144532_+\|transposase	transposase	NA	NA	NA	NA
WP_164071439.1\|1145283_1145442_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_100664811.1\|1145512_1146343_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1308220 : 1316419

Streptococcus_phage(71.43%)

integrase

attL 1300097:1300112|attR 1310499:1310514

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1300097:1300112	attL	NA	NA	NA	NA
WP_029176741.1\|1308220_1309108_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	3.8e-25	28.0
WP_024418319.1\|1309152_1309452_-	hypothetical protein	NA	NA	NA	NA
WP_029176742.1\|1309465_1309765_-	hypothetical protein	NA	NA	NA	NA
WP_002943355.1\|1311206_1311476_-	zeta toxin	NA	NA	NA	NA
1310499:1310514	attR	NA	NA	NA	NA
WP_002326825.1\|1311477_1311750_-	antitoxin	A0A1X9I6E5	Streptococcus_phage	5.4e-07	96.7
WP_001835296.1\|1311767_1311983_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	4.2e-31	97.1
WP_100664816.1\|1312074_1312608_-	ParA family protein	A0A1X9I765	Streptococcus_phage	1.2e-79	97.4
WP_001096887.1\|1312598_1313393_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_001814874.1\|1314323_1314407_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_000635249.1\|1314455_1314695_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	6.8e-22	81.5
WP_000503424.1\|1315926_1316118_-	hypothetical protein	NA	NA	NA	NA
WP_000659121.1\|1316188_1316419_-	hypothetical protein	A0A223LEC3	Bacillus_phage	4.2e-13	48.5

DBSCAN-SWA_8

1326144 : 1339147

Streptococcus_phage(88.89%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001140406.1\|1326144_1326519_-	TnpV protein	A0A1B0RXG6	Streptococcus_phage	2.0e-68	100.0
WP_100664819.1\|1328418_1328925_-	AAA family ATPase	NA	NA	NA	NA
WP_000301765.1\|1328926_1329199_-	antitoxin	A0A1X9I6E5	Streptococcus_phage	5.0e-05	100.0
WP_002321610.1\|1329215_1329431_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.4e-31	98.6
WP_079396257.1\|1329543_1330077_-	ParA family protein	A0A1X9I765	Streptococcus_phage	4.6e-79	96.8
WP_001096887.1\|1330067_1330862_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_073459356.1\|1331561_1331846_-	topoisomerase	A0A1X9I6W8	Streptococcus_phage	2.3e-40	93.0
WP_100664820.1\|1331991_1332729_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	1.4e-134	99.6
WP_001809736.1\|1332853_1332949_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_014638415.1\|1332969_1333140_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	2.4e-13	94.9
WP_100664821.1\|1333222_1339147_-	N-6 DNA methylase	I3PUW5	Vibrio_phage	8.0e-188	31.3

DBSCAN-SWA_9

1435791 : 1554729

105

Streptococcus_phage(88.16%)

terminase,tail,protease,transposase,portal,holin,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100664827.1\|1435791_1437018_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.9e-126	56.8
WP_002943689.1\|1437055_1440709_-	helicase-exonuclease AddAB subunit AddA	G3MA40	Bacillus_virus	9.4e-22	23.6
WP_002943688.1\|1440708_1443975_-	ATP-dependent nuclease subunit B	NA	NA	NA	NA
WP_100664828.1\|1444103_1445246_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_100664829.1\|1445259_1452057_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_002943677.1\|1452268_1452433_-	hypothetical protein	NA	NA	NA	NA
WP_002943676.1\|1452616_1453930_-	GTPase ObgE	NA	NA	NA	NA
WP_002943675.1\|1454133_1454262_-	DUF4044 domain-containing protein	NA	NA	NA	NA
WP_002943673.1\|1454433_1454817_-	hypothetical protein	NA	NA	NA	NA
WP_002943670.1\|1454977_1456747_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_002943668.1\|1456986_1457730_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.3e-26	29.4
WP_002943664.1\|1457726_1459337_+	hypothetical protein	NA	NA	NA	NA
WP_002935466.1\|1459364_1459808_-	VOC family protein	NA	NA	NA	NA
WP_164071440.1\|1459896_1460649_-	M15 family metallopeptidase	NA	NA	NA	NA
WP_002943658.1\|1461142_1461394_-\|holin	holin	NA	NA	NA	NA
WP_002943656.1\|1461636_1462401_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002943654.1\|1462479_1463163_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_002943652.1\|1463552_1464221_-	DUF1524 domain-containing protein	NA	NA	NA	NA
WP_002943648.1\|1464575_1464851_-	hypothetical protein	NA	NA	NA	NA
WP_002943646.1\|1464910_1467190_-	DNA helicase PcrA	A7KV33	Bacillus_phage	1.1e-129	41.3
WP_002943644.1\|1467464_1468676_-	Fic family protein	Q9AZ49	Lactococcus_phage	1.4e-67	36.4
WP_002943642.1\|1468818_1470186_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_002935455.1\|1470371_1470710_-	hypothetical protein	NA	NA	NA	NA
WP_002943637.1\|1470877_1472668_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	0.0e+00	99.0
WP_050810556.1\|1472696_1473089_-	hypothetical protein	NA	NA	NA	NA
WP_002943633.1\|1473311_1474262_-	2,6-dichloro-p-hydroquinone 1,2-dioxygenase	NA	NA	NA	NA
WP_002943631.1\|1474392_1475100_-	aquaporin family protein	M1HJ77	Paramecium_bursaria_Chlorella_virus	7.7e-21	29.1
WP_002943626.1\|1476264_1477200_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_002943623.1\|1477272_1478349_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002943621.1\|1478642_1478921_-	DUF1905 domain-containing protein	NA	NA	NA	NA
WP_002943618.1\|1478929_1479583_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_002943615.1\|1479572_1480082_-	N-acetyltransferase	NA	NA	NA	NA
WP_002943609.1\|1480082_1480700_-	DUF5052 family protein	A0A2K9VCV0	Lactobacillus_phage	2.2e-48	50.3
WP_002943607.1\|1480776_1482093_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-91	41.5
WP_002943604.1\|1482308_1483118_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_100664830.1\|1483157_1485146_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_033875651.1\|1485650_1486346_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_024376543.1\|1486338_1486887_+	phosphopantothenoylcysteine decarboxylase	A0A068EHP1	Penguinpox_virus	2.8e-23	37.8
WP_002943600.1\|1486873_1487443_+	ECF transporter S component	NA	NA	NA	NA
WP_002943598.1\|1487534_1489253_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	0.0e+00	100.0
WP_033875649.1\|1489490_1489934_-	GNAT family N-acetyltransferase	A0A1X9I687	Streptococcus_phage	8.6e-79	99.3
WP_002943593.1\|1489959_1490385_-	GNAT family N-acetyltransferase	A0A1X9I6I8	Streptococcus_phage	9.4e-75	100.0
WP_002943592.1\|1490851_1491577_-	methyltransferase domain-containing protein	A0A1X9I669	Streptococcus_phage	9.6e-136	100.0
WP_033875646.1\|1491573_1492197_-	hypothetical protein	A0A1X9I672	Streptococcus_phage	5.2e-82	100.0
WP_002943587.1\|1493325_1493619_-	DUF4176 domain-containing protein	A0A1X9I6T6	Streptococcus_phage	1.8e-48	100.0
WP_002943583.1\|1493632_1494511_-	hypothetical protein	A0A1X9I696	Streptococcus_phage	8.6e-155	100.0
WP_002943581.1\|1494513_1494927_-	hypothetical protein	A0A1X9I683	Streptococcus_phage	5.9e-74	100.0
WP_079255332.1\|1495047_1496364_-	recombinase family protein	A0A1X9I690	Streptococcus_phage	9.6e-251	99.8
WP_002943572.1\|1496302_1497544_-	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	3.3e-237	100.0
WP_002943570.1\|1497767_1499237_-	LysM peptidoglycan-binding domain-containing protein	A0A1X9I678	Streptococcus_phage	9.9e-281	100.0
WP_002943563.1\|1499243_1499639_-\|holin	phage holin family protein	E4ZFN6	Streptococcus_phage	3.8e-46	100.0
WP_002943562.1\|1499616_1499985_-	hypothetical protein	A0A1X9I686	Streptococcus_phage	4.1e-66	100.0
WP_002943561.1\|1499990_1500197_-	hypothetical protein	A0A1X9I679	Streptococcus_phage	8.7e-26	100.0
WP_100664831.1\|1500209_1504757_-	matrix-binding protein EbhB	A0A1X9I747	Streptococcus_phage	0.0e+00	100.0
WP_100664832.1\|1504758_1505481_-\|tail	phage tail protein	A0A1X9I6T8	Streptococcus_phage	1.1e-134	100.0
WP_100664833.1\|1505477_1508336_-\|tail	phage tail tape measure protein	A0A1X9I6B4	Streptococcus_phage	4.7e-295	100.0
WP_100664834.1\|1508518_1508938_-	hypothetical protein	A0A1X9I691	Streptococcus_phage	2.1e-71	100.0
WP_100664835.1\|1508949_1509519_-\|tail	phage tail protein	A0A1X9I6A1	Streptococcus_phage	9.9e-104	100.0
WP_044752899.1\|1509520_1509847_-	hypothetical protein	A0A1X9I6J7	Streptococcus_phage	5.2e-57	100.0
WP_100664836.1\|1509853_1510222_-	hypothetical protein	A0A1X9I688	Streptococcus_phage	2.1e-54	100.0
WP_074414536.1\|1510214_1510553_-\|head,tail	head-tail adaptor protein	A0A1X9I694	Streptococcus_phage	2.6e-59	100.0
WP_044679084.1\|1510552_1510810_-\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	3.5e-40	100.0
WP_024052957.1\|1510812_1512018_-\|capsid	phage major capsid protein	A0A1X9I692	Streptococcus_phage	5.0e-230	100.0
WP_100664837.1\|1512036_1512732_-\|protease	Clp protease ClpP	A0A1X9I749	Streptococcus_phage	3.0e-126	100.0
WP_100664838.1\|1512724_1514008_-\|portal	phage portal protein	A0A1X9I6U5	Streptococcus_phage	2.7e-250	100.0
WP_024388646.1\|1514148_1514520_-	type II toxin-antitoxin system death-on-curing family toxin	A0A1X9I6C0	Streptococcus_phage	6.1e-62	100.0
WP_024418899.1\|1514516_1514774_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A1X9I6A0	Streptococcus_phage	9.5e-38	100.0
WP_100664839.1\|1514844_1516437_-\|terminase	terminase large subunit	A0A1X9I6B3	Streptococcus_phage	0.0e+00	100.0
WP_024418901.1\|1516433_1516907_-\|terminase	phage terminase small subunit P27 family	A0A1X9I6K0	Streptococcus_phage	9.1e-87	100.0
WP_018374774.1\|1516957_1517188_-	hypothetical protein	A0A1X9I697	Streptococcus_phage	3.1e-40	100.0
WP_024399324.1\|1517189_1517402_-	DUF4314 domain-containing protein	A0A1X9I6A3	Streptococcus_phage	3.1e-34	100.0
WP_018374776.1\|1517403_1517652_-	hypothetical protein	A0A1X9I6A4	Streptococcus_phage	3.4e-40	100.0
WP_100664840.1\|1517724_1519005_-	DNA (cytosine-5-)-methyltransferase	A0A1X9I6A7	Streptococcus_phage	3.5e-250	100.0
WP_024399322.1\|1519001_1521113_-	ParB N-terminal domain-containing protein	A0A1X9I751	Streptococcus_phage	0.0e+00	100.0
WP_024399321.1\|1521084_1521546_-	hypothetical protein	A0A1X9I6V0	Streptococcus_phage	1.9e-89	100.0
WP_074414529.1\|1521844_1522210_-	HNH endonuclease	A0A1X9I6D0	Streptococcus_phage	7.1e-71	100.0
WP_024388637.1\|1523431_1523614_-	hypothetical protein	A0A1X9I6B9	Streptococcus_phage	2.6e-26	100.0
WP_032462756.1\|1523702_1523930_-	hypothetical protein	A0A1X9I6K4	Streptococcus_phage	2.7e-36	100.0
WP_100664842.1\|1524115_1524619_-	hypothetical protein	A0A1X9I6A6	Streptococcus_phage	3.9e-88	100.0
WP_100664843.1\|1524611_1525988_-	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	7.9e-264	100.0
WP_003084768.1\|1525968_1526250_-	VRR-NUC domain-containing protein	A0A1X9I6B2	Streptococcus_phage	1.6e-46	100.0
WP_100664844.1\|1526534_1528820_-	DNA primase	A0A1X9I6B6	Streptococcus_phage	0.0e+00	100.0
WP_044685914.1\|1529218_1529542_+	hypothetical protein	A0A1X9I6V4	Streptococcus_phage	8.2e-47	100.0
WP_100664845.1\|1529534_1530656_+	DUF2800 domain-containing protein	A0A1X9I6D8	Streptococcus_phage	1.7e-219	100.0
WP_024411458.1\|1530660_1531209_+	DUF2815 family protein	A0A1X9I6C5	Streptococcus_phage	3.2e-99	100.0
WP_100664846.1\|1531443_1533399_+	DNA polymerase	A0A1X9I6L4	Streptococcus_phage	0.0e+00	100.0
WP_024376920.1\|1533437_1534007_-	hypothetical protein	A0A1X9I6B5	Streptococcus_phage	1.6e-106	100.0
WP_024376919.1\|1534403_1536290_-	XRE family transcriptional regulator	A0A1X9I6C7	Streptococcus_phage	0.0e+00	100.0
WP_029743928.1\|1536419_1536722_+	helix-turn-helix transcriptional regulator	A0A1X9I6D3	Streptococcus_phage	1.8e-48	100.0
WP_014293938.1\|1536755_1537436_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	4.0e-128	100.0
WP_100664847.1\|1537627_1537855_-	hypothetical protein	A0A1X9I756	Streptococcus_phage	2.3e-27	100.0
WP_164071424.1\|1539134_1539815_-\|transposase	IS6 family transposase	A0A1X9I6E7	Streptococcus_phage	1.4e-128	100.0
WP_100664732.1\|1540006_1540270_-	hypothetical protein	A0A1X9I6D4	Streptococcus_phage	1.2e-32	100.0
WP_001028144.1\|1541674_1543114_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
WP_025189010.1\|1543114_1543507_-	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	1.4e-69	96.9
WP_002295735.1\|1543597_1543813_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.4e-31	98.6
WP_021732891.1\|1543911_1544766_-	ParA family protein	A0A1X9I765	Streptococcus_phage	1.1e-154	100.0
WP_010725964.1\|1544910_1546398_-	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	2.6e-276	100.0
WP_002338419.1\|1546588_1547908_-\|transposase	IS1380-like element ISSsu5 family transposase	A0A1X9I6F6	Streptococcus_phage	1.3e-252	100.0
WP_002294507.1\|1548135_1548663_-	adenine phosphoribosyltransferase	A0A1X9I6E2	Streptococcus_phage	1.9e-93	100.0
WP_002294505.1\|1548706_1549570_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	A0A1X9I6F2	Streptococcus_phage	8.7e-168	100.0
WP_000662263.1\|1549602_1550337_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.5e-141	100.0
WP_002941312.1\|1550317_1551187_-	nucleotidyltransferase domain-containing protein	A0A1X9I6C9	Streptococcus_phage	6.2e-166	100.0
WP_002941306.1\|1552811_1552982_-	hypothetical protein	A0A1X9I6E4	Streptococcus_phage	5.7e-23	100.0
WP_002941302.1\|1553373_1554729_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	2.7e-256	100.0

DBSCAN-SWA_10

1723458 : 1742594

Streptococcus_phage(85.71%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100664888.1\|1723458_1725285_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.7e-25	28.0
WP_100664889.1\|1725313_1726045_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_004194930.1\|1726083_1726770_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	8.5e-110	95.8
WP_024378209.1\|1726779_1727469_-	capsular biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.5e-106	90.0
WP_100664890.1\|1727485_1728925_-	LCP family protein	A0A1X9I5X1	Streptococcus_phage	1.9e-204	90.0
WP_100664891.1\|1729030_1729765_-	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	1.3e-119	98.6
WP_004194921.1\|1729883_1731143_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.1e-239	98.6
WP_004194918.1\|1731233_1732085_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	2.7e-153	98.9
WP_004194915.1\|1732211_1732616_+	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	2.7e-63	98.5
WP_100664892.1\|1732741_1734031_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_004194912.1\|1734176_1734962_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	3.6e-128	93.5
WP_004194909.1\|1734971_1736210_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.3e-214	95.9
WP_004194907.1\|1736219_1737296_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.6e-193	99.2
WP_004194905.1\|1737818_1740332_-	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	0.0e+00	92.8
WP_004194902.1\|1740394_1741033_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	2.5e-124	97.6
WP_004194901.1\|1741078_1741582_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004194899.1\|1741571_1742594_-	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	4.3e-49	48.2

DBSCAN-SWA_11

1827253 : 1863493

Streptococcus_phage(30.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100664894.1\|1827253_1827751_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_100664895.1\|1827747_1828086_+	DUF368 domain-containing protein	NA	NA	NA	NA
WP_002940179.1\|1828085_1828568_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_002940177.1\|1828570_1829194_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_004195774.1\|1830566_1831781_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_100664896.1\|1832122_1833286_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.8e-12	24.3
WP_002940168.1\|1833486_1834977_+\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	4.6e-92	42.4
WP_100664897.1\|1836146_1837310_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.3e-12	24.3
WP_100664898.1\|1837490_1838663_-\|transposase	IS110 family transposase	A0A1X9I5G9	Streptococcus_phage	1.4e-30	93.2
WP_100664899.1\|1838992_1839841_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.6e-41	42.0
WP_002943067.1\|1840074_1840809_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-37	41.1
WP_002938702.1\|1840801_1841491_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002938704.1\|1841616_1841847_-	DUF1797 family protein	NA	NA	NA	NA
WP_015646546.1\|1842070_1844299_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	5.6e-126	40.4
WP_002938708.1\|1844484_1844946_+	NUDIX hydrolase	NA	NA	NA	NA
WP_002938710.1\|1845000_1845309_+	DUF1827 family protein	NA	NA	NA	NA
WP_100664900.1\|1845492_1848282_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.1e-91	27.6
WP_100664901.1\|1848292_1848733_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024385043.1\|1848965_1849655_-	DivIVA domain-containing protein	NA	NA	NA	NA
WP_002943043.1\|1849663_1850455_-	RNA-binding protein	NA	NA	NA	NA
WP_002943042.1\|1850457_1850721_-	YggT family protein	NA	NA	NA	NA
WP_002943041.1\|1850725_1851289_-	cell division protein SepF	NA	NA	NA	NA
WP_002943040.1\|1851305_1851977_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_002943037.1\|1851983_1853213_-	cell division protein FtsZ	NA	NA	NA	NA
WP_024378975.1\|1853238_1854618_-	cell division protein FtsA	NA	NA	NA	NA
WP_100664902.1\|1854770_1855853_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_100664903.1\|1855858_1856923_-	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA
WP_100664904.1\|1856919_1858275_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_002943028.1\|1858473_1859730_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.3e-169	72.7
WP_002943024.1\|1859794_1860085_-	DUF3165 family protein	NA	NA	NA	NA
WP_002943010.1\|1860102_1861950_-	translational GTPase TypA	NA	NA	NA	NA
WP_100664905.1\|1862785_1863493_-\|transposase	transposase	A0A1X9I5G9	Streptococcus_phage	1.4e-30	94.6

DBSCAN-SWA_12

2220676 : 2278711

Streptococcus_phage(23.08%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100664706.1\|2220676_2221933_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.8e-175	74.3
WP_100664928.1\|2222192_2226584_-	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	1.3e-17	31.2
WP_002940103.1\|2226752_2227763_+\|protease	protease SohB	NA	NA	NA	NA
WP_100664929.1\|2227849_2229709_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_100664930.1\|2230044_2231304_-\|protease	metalloprotease RseP	NA	NA	NA	NA
WP_002940117.1\|2231313_2232120_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_013730586.1\|2232129_2232885_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.8e-21	41.3
WP_002940126.1\|2232998_2233322_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_002940128.1\|2233431_2234724_-	adenylosuccinate synthase	L7Y4J5	Megavirus	2.1e-69	36.2
WP_002940130.1\|2235087_2237319_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA
WP_002940131.1\|2237853_2240973_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_013730589.1\|2241052_2241919_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_100664931.1\|2241911_2242916_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_002940137.1\|2243011_2243503_-	adenylyltransferase/cytidyltransferase family protein	A0A291I9M1	Lactobacillus_phage	1.9e-23	38.8
WP_100664932.1\|2243596_2246047_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	4.9e-123	40.1
WP_002937810.1\|2246050_2246509_-	hypothetical protein	NA	NA	NA	NA
WP_100664933.1\|2246779_2247118_+	thiol reductase thioredoxin	NA	NA	NA	NA
WP_100664934.1\|2247117_2247819_+	GNAT family acetyltransferase	NA	NA	NA	NA
WP_002940148.1\|2248138_2249179_-	elongation factor Ts	NA	NA	NA	NA
WP_002940151.1\|2249446_2250223_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_002940153.1\|2250466_2251924_-	arylsulfatase	A0A2K9L1A5	Tupanvirus	5.8e-15	26.8
WP_002940154.1\|2251944_2252760_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_002940155.1\|2252746_2253538_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002940157.1\|2253738_2254710_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_002940159.1\|2254952_2256071_-	SPASM domain-containing protein	NA	NA	NA	NA
WP_029178298.1\|2256998_2258120_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_002940248.1\|2258590_2259457_-	formylglycine-generating enzyme family protein	A0A7H6	Microcystis_virus	6.5e-14	27.1
WP_002940250.1\|2260525_2261308_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_002940254.1\|2261596_2262136_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	3.5e-10	28.2
WP_002940255.1\|2262246_2262423_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_002940258.1\|2262432_2262585_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_002940262.1\|2262618_2264832_-	penicillin-binding protein	NA	NA	NA	NA
WP_002940264.1\|2264984_2265953_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	4.7e-45	67.7
WP_033875384.1\|2265955_2266822_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_033875365.1\|2266848_2267661_-	pur operon repressor	A0A1V0SKE5	Klosneuvirus	1.4e-05	24.7
WP_033875366.1\|2267750_2268629_-	phosphotransferase	NA	NA	NA	NA
WP_033875367.1\|2268628_2269570_-	HD domain-containing protein	NA	NA	NA	NA
WP_033875369.1\|2269559_2270798_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_033875373.1\|2270798_2271431_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_033875376.1\|2271423_2272083_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_002940273.1\|2272097_2272973_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_100664935.1\|2273130_2274270_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002940279.1\|2274504_2275182_-	recombinase family protein	NA	NA	NA	NA
WP_002940281.1\|2275616_2277194_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.2e-20	31.8
WP_100664936.1\|2277460_2278711_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.8e-127	56.8

DBSCAN-SWA_13

2486257 : 2511278

Streptococcus_phage(73.08%)

transposase,integrase

attL 2495605:2495620|attR 2508007:2508022

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002941832.1\|2486257_2486926_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-42	43.6
WP_002941829.1\|2486922_2488305_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.5e-25	29.4
WP_002941823.1\|2488425_2488980_-	LysM peptidoglycan-binding domain-containing protein	A0A096XT26	Enterococcus_phage	1.0e-28	48.3
WP_002938197.1\|2489111_2489906_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_002938195.1\|2489898_2490741_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	8.3e-14	28.0
WP_002941820.1\|2490716_2491553_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.2e-22	32.9
WP_002941818.1\|2491549_2492089_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_002941812.1\|2492098_2492956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002941810.1\|2493037_2494321_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	8.2e-05	25.8
WP_002941805.1\|2494317_2495571_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	2.7e-234	100.0
2495605:2495620	attL	NA	NA	NA	NA
WP_002941801.1\|2495873_2496251_-	antitoxin HicB	A0A1X9I5X0	Streptococcus_phage	2.4e-66	100.0
WP_002941795.1\|2496286_2496478_-	type II toxin-antitoxin system HicA family toxin	A0A1X9I5T5	Streptococcus_phage	9.2e-30	100.0
WP_033875540.1\|2496646_2497054_-	ArpU family transcriptional regulator	A0A1X9I5Y7	Streptococcus_phage	2.8e-68	100.0
WP_123921730.1\|2497068_2497230_-	sigma-70 family RNA polymerase sigma factor	A0A1X9I699	Streptococcus_phage	1.3e-24	100.0
WP_100664963.1\|2497892_2499269_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.0e-275	100.0
WP_100664964.1\|2499358_2499928_-	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	1.1e-102	100.0
WP_002941785.1\|2499948_2500122_-	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	2.0e-23	100.0
WP_033875522.1\|2500417_2502085_-	DNA primase	A0A1X9I717	Streptococcus_phage	2.3e-294	100.0
WP_002941782.1\|2502068_2502920_-	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	7.0e-162	100.0
WP_002941778.1\|2503048_2503333_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	4.7e-46	100.0
WP_002941771.1\|2503657_2503807_-	hypothetical protein	A0A1X9I6A8	Streptococcus_phage	7.9e-21	100.0
WP_002941770.1\|2503818_2504022_-	hypothetical protein	A0A1X9I5T6	Streptococcus_phage	4.7e-32	100.0
WP_002941769.1\|2504021_2504450_-	hypothetical protein	A0A1X9I5T7	Streptococcus_phage	1.7e-76	100.0
WP_002941767.1\|2504895_2505303_-	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	1.2e-71	100.0
WP_002941765.1\|2505320_2505518_-	helix-turn-helix transcriptional regulator	A0A1X9I5U5	Streptococcus_phage	2.6e-27	100.0
WP_002941764.1\|2505725_2506253_+	helix-turn-helix transcriptional regulator	A0A1X9I723	Streptococcus_phage	1.4e-91	100.0
WP_002941762.1\|2506736_2507909_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	6.4e-222	100.0
WP_002941761.1\|2508046_2508430_+	hypothetical protein	A0A1X9I5V8	Streptococcus_phage	2.0e-36	100.0
2508007:2508022	attR	NA	NA	NA	NA
WP_002941760.1\|2508432_2509527_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_002941758.1\|2509796_2511278_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.7e-97	41.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024974

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection