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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024963 Entomoplasma luminosum strain PIMN-1 chromosome, complete genome 6 crisprs NA 0 6 1 0

Results visualization

1. NZ_CP024963
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_1 94682-94789 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_2 97411-97586 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_3 102943-103048 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_4 427169-427578 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_5 506503-506607 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024963_6 1006954-1007522 Orphan NA
7 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024963_6 6.2|1007073|31|NZ_CP024963|CRT 1007073-1007103 31 MT811961 Vibrio phage vB_pir03, complete genome 178130-178160 5 0.839
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_AP017918 Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ4 DNA, complete sequence, phylotype ProJPt-1 5143-5173 6 0.806
NZ_CP024963_6 6.1|1006998|31|NZ_CP024963|CRT 1006998-1007028 31 NC_015418 Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence 43539-43569 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP020558 Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence 52572-52602 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP019924 Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence 31642-31672 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NC_011778 Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence 31667-31697 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NC_001855 Borreliella burgdorferi B31 plasmid lp36, complete sequence 31642-31672 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP019852 Borreliella burgdorferi plasmid lp36, complete sequence 31510-31540 7 0.774
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP019763 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence 31576-31606 7 0.774
NZ_CP024963_6 6.4|1007223|31|NZ_CP024963|CRT 1007223-1007253 31 MK279840 Mycobacterium phage JacoRen57, complete genome 41713-41743 8 0.742
NZ_CP024963_6 6.5|1007298|31|NZ_CP024963|CRT 1007298-1007328 31 MN693308 Marine virus AFVG_25M475, complete genome 29321-29351 8 0.742
NZ_CP024963_6 6.5|1007298|31|NZ_CP024963|CRT 1007298-1007328 31 MN693437 Marine virus AFVG_25M476, complete genome 29293-29323 8 0.742
NZ_CP024963_6 6.6|1007373|31|NZ_CP024963|CRT 1007373-1007403 31 MH884513 Bacillus phage vB_BpsS-36, complete genome 6265-6295 8 0.742
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 MG592435 Vibrio phage 1.055.O._10N.286.55.E9, partial genome 43505-43535 8 0.742
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 MK448804 Streptococcus phage Javan553, complete genome 8345-8375 8 0.742
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP006665 Edwardsiella anguillarum ET080813 strain 80813 plasmid 1, complete sequence 74921-74951 8 0.742
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_CP035669 Edwardsiella piscicida strain MS-18-199 plasmid pEP-MS-18-199, complete sequence 76416-76446 8 0.742
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 KT997868 Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome 9171-9201 8 0.742
NZ_CP024963_6 6.1|1006998|31|NZ_CP024963|CRT 1006998-1007028 31 NZ_CP015197 Streptococcus marmotae strain HTS5 plasmid unnamed 1, complete sequence 5207-5237 9 0.71
NZ_CP024963_6 6.1|1006998|31|NZ_CP024963|CRT 1006998-1007028 31 NZ_CP031070 Bacillus sp. JAS24-2 plasmid pl278, complete sequence 22605-22635 9 0.71
NZ_CP024963_6 6.1|1006998|31|NZ_CP024963|CRT 1006998-1007028 31 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 1066648-1066678 9 0.71
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 MK542648 Poxviridae sp. strain 1000-15 DNA polymerase gene, partial cds 824-854 9 0.71
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 MK542650 Poxviridae sp. strain 1000-15 DNA polymerase gene, complete cds 1616-1646 9 0.71
NZ_CP024963_6 6.7|1007448|31|NZ_CP024963|CRT 1007448-1007478 31 NZ_LR134433 Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24 271939-271969 9 0.71

1. spacer 6.2|1007073|31|NZ_CP024963|CRT matches to MT811961 (Vibrio phage vB_pir03, complete genome) position: , mismatch: 5, identity: 0.839

atatggatgacatgtttaataatgcagctga	CRISPR spacer
acatggatgacatgtttaacaatgcaacttc	Protospacer
*.*****************.******.**  

2. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_AP017918 (Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ4 DNA, complete sequence, phylotype ProJPt-1) position: , mismatch: 6, identity: 0.806

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
atatgaaaaaacagtttaataataaaaaatc	Protospacer
***********  **********. * ** *

3. spacer 6.1|1006998|31|NZ_CP024963|CRT matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaagaaaatgtttaaaagagccctatt	CRISPR spacer
atattaagaatatgtttaaaagaggtttttc	Protospacer
**** ***** ************* ..* *.

4. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
ataagaaaaaaatgtttaataaagacaaaat	Protospacer
*** ****************** *   **..

5. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP019924 (Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taatttataaaatgattaataatgcataagc	Protospacer
  **  * ****** ***********.****

6. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NC_011778 (Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taatttataaaatgattaataatgcataagc	Protospacer
  **  * ****** ***********.****

7. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NC_001855 (Borreliella burgdorferi B31 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taatttataaaatgattaataatgcataagc	Protospacer
  **  * ****** ***********.****

8. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP019852 (Borreliella burgdorferi plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taatttataaaatgattaataatgcataagc	Protospacer
  **  * ****** ***********.****

9. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP019763 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.774

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taatttataaaatgattaataatgcataagc	Protospacer
  **  * ****** ***********.****

10. spacer 6.4|1007223|31|NZ_CP024963|CRT matches to MK279840 (Mycobacterium phage JacoRen57, complete genome) position: , mismatch: 8, identity: 0.742

gcatgcatgctatgtttgaccgatcacataa	CRISPR spacer
tcatccatgcaatgtttgaccgatccattgt	Protospacer
 *** ***** **************   *. 

11. spacer 6.5|1007298|31|NZ_CP024963|CRT matches to MN693308 (Marine virus AFVG_25M475, complete genome) position: , mismatch: 8, identity: 0.742

atatggaatgaatgttttatgatgcctatca	CRISPR spacer
aaatgaaatgaatgttttatcatgctttgat	Protospacer
* ***.************** ****.*    

12. spacer 6.5|1007298|31|NZ_CP024963|CRT matches to MN693437 (Marine virus AFVG_25M476, complete genome) position: , mismatch: 8, identity: 0.742

atatggaatgaatgttttatgatgcctatca	CRISPR spacer
aaatgaaatgaatgttttatcatgctttgat	Protospacer
* ***.************** ****.*    

13. spacer 6.6|1007373|31|NZ_CP024963|CRT matches to MH884513 (Bacillus phage vB_BpsS-36, complete genome) position: , mismatch: 8, identity: 0.742

gtatgcaagctatgtttgagaacacacataa	CRISPR spacer
gtatgcaagctatgtatgaaaaccctattgc	Protospacer
*************** ***.*** *   *. 

14. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to MG592435 (Vibrio phage 1.055.O._10N.286.55.E9, partial genome) position: , mismatch: 8, identity: 0.742

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
atatgaacaaaatgtttattaatgccgggtt	Protospacer
******* ********** ******  .. .

15. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to MK448804 (Streptococcus phage Javan553, complete genome) position: , mismatch: 8, identity: 0.742

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
ctatgaaaaaaatgtttgataataatcatat	Protospacer
 ****************.*****.  ** ..

16. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP006665 (Edwardsiella anguillarum ET080813 strain 80813 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.742

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
actcggcaaaaataattaataatgcacaagt	Protospacer
*. .*. ******. ***************.

17. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_CP035669 (Edwardsiella piscicida strain MS-18-199 plasmid pEP-MS-18-199, complete sequence) position: , mismatch: 8, identity: 0.742

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
actcggcaaaaataattaataatgcacaagt	Protospacer
*. .*. ******. ***************.

18. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 8, identity: 0.742

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
taaatacaaaaattattaataatgcacaaga	Protospacer
  *  * ******  *************** 

19. spacer 6.1|1006998|31|NZ_CP024963|CRT matches to NZ_CP015197 (Streptococcus marmotae strain HTS5 plasmid unnamed 1, complete sequence) position: , mismatch: 9, identity: 0.71

atatgaagaaaatgtttaaaagagccctatt	CRISPR spacer
atatgaagaagatatttaaaagaataaaaaa	Protospacer
**********.**.*********..   *  

20. spacer 6.1|1006998|31|NZ_CP024963|CRT matches to NZ_CP031070 (Bacillus sp. JAS24-2 plasmid pl278, complete sequence) position: , mismatch: 9, identity: 0.71

atatgaagaaaatgtttaaaagagccctatt	CRISPR spacer
atataaagaaaatgattaaaagacaaaaaaa	Protospacer
****.********* ********     *  

21. spacer 6.1|1006998|31|NZ_CP024963|CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 9, identity: 0.71

atatgaagaaaatgtttaaaagagccctatt	CRISPR spacer
atatgaaggaaatgattaaaagactttcttc	Protospacer
********.***** ******** .... *.

22. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to MK542648 (Poxviridae sp. strain 1000-15 DNA polymerase gene, partial cds) position: , mismatch: 9, identity: 0.71

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
ctaagaaaaaaatgtttaataataatgtatt	Protospacer
 ** *******************.    * .

23. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to MK542650 (Poxviridae sp. strain 1000-15 DNA polymerase gene, complete cds) position: , mismatch: 9, identity: 0.71

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
ctaagaaaaaaatgtttaataataatgtatt	Protospacer
 ** *******************.    * .

24. spacer 6.7|1007448|31|NZ_CP024963|CRT matches to NZ_LR134433 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24) position: , mismatch: 9, identity: 0.71

atatgaaaaaaatgtttaataatgcacaagc	CRISPR spacer
caccgcctaaaatggttaataaagcacaagc	Protospacer
   .*   ****** ******* ********

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 183841 : 197399 14 Streptococcus_phage(22.22%) protease,tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage