CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP025055	Pseudomonas aeruginosa strain PB350 chromosome, complete genome	2 crisprs	csa3,RT,PD-DExK,DEDDh,cas3,WYL,DinG	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025055_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025055_1

60682-60829

Orphan

Consensus_repeat	Method
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025055_1

>merge|NZ_CP025055|1|60682-60829|CRISPRCasFinder
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAGAGAACAAAGGGGACAGATTTATTTTCCCTACTCTAGTTTTCTAAGCAAGGAGGCTCCAGCGCAGCCGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG

>NZ_CP025055|1|1|60682-60829|CRISPRCasFinder
GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG	AGAACAAAGGGGACAGATTTATTTTCCCTACTCTAGTTTTCTAAGCAA
GGAGGCTCCAGCGCAGCCGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025055.1\|WP_003083559.1\|65294_65981_+\|curli-production-assembly-protein-CsgG	unknown	unknown	gnl\|CDD\|224379
NZ_CP025055.1\|WP_086937300.1\|59387_60550_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP025055.1\|WP_003083573.1\|66361_67027_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NZ_CP025055.1\|WP_034024234.1\|42979_54595_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379124
NZ_CP025055.1\|WP_003083553.1\|61853_63107_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|225715
NZ_CP025055.1\|WP_003083569.1\|66011_66365_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|226710
NZ_CP025055.1\|WP_003083575.1\|67041_67425_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP025055.1\|WP_003097340.1\|37954_39163_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP025055.1\|WP_014603458.1\|67706_69368_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_003097343.1\|39266_40154_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176171
NZ_CP025055.1\|WP_003083536.1\|61193_61589_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_003083582.1\|69977_70118_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_003083555.1\|63425_64799_+\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	unknown	unknown	gnl\|CDD\|227872
NZ_CP025055.1\|WP_003097347.1\|40653_40881_+\|DUF1161-domain-containing-protein	unknown	unknown	gnl\|CDD\|369019
NZ_CP025055.1\|WP_003083586.1\|70939_72772_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP025055.1\|WP_071533944.1\|55447_55663_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP025055.1\|WP_014603455.1\|41178_42867_+\|two-partner-secretion-system-transporter-TpsB2	unknown	unknown	gnl\|CDD\|225387
NZ_CP025055.1\|WP_123788640.1\|54591_54993_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_100814894.1\|55883_58790_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377410
NZ_CP025055.1\|WP_003097345.1\|40254_40470_+\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|225896

Protein	Function_ID	Function_description	E-value
NZ_CP025055.1\|WP_003083559.1\|65294_65981_+\|curli-production-assembly-protein-CsgG	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	3.72394e-88
NZ_CP025055.1\|WP_086937300.1\|59387_60550_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.44652e-87
NZ_CP025055.1\|WP_003083573.1\|66361_67027_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	2.9667e-121
NZ_CP025055.1\|WP_034024234.1\|42979_54595_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	8.68186e-41
NZ_CP025055.1\|WP_003083553.1\|61853_63107_-\|MgtC/SapB-family-protein	gnl\|CDD\|225715	COG3174, COG3174, Predicted membrane protein [Function unknown].	7.51308e-88
NZ_CP025055.1\|WP_003083569.1\|66011_66365_+\|DUF4810-domain-containing-protein	gnl\|CDD\|226710	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown].	2.32647e-62
NZ_CP025055.1\|WP_003083575.1\|67041_67425_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.28572e-09
NZ_CP025055.1\|WP_003097340.1\|37954_39163_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP025055.1\|WP_003097343.1\|39266_40154_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176171	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold. TrpI and indoleglycerol phosphate (InGP), are required to activate transcription of the trpBA, the genes for tryptophan synthase. The trpBA is induced by the InGp substrate, rather than by tryptophan, but the exact mechanism of the activation event is not known. This substrate-binding domain of TrpI shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.34631e-98
NZ_CP025055.1\|WP_003083555.1\|63425_64799_+\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	gnl\|CDD\|227872	COG5585, COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms].	1.87747e-56
NZ_CP025055.1\|WP_003097347.1\|40653_40881_+\|DUF1161-domain-containing-protein	gnl\|CDD\|369019	pfam06649, DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.	2.11491e-24
NZ_CP025055.1\|WP_003083586.1\|70939_72772_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP025055.1\|WP_071533944.1\|55447_55663_+\|hypothetical-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	2.45371e-05
NZ_CP025055.1\|WP_014603455.1\|41178_42867_+\|two-partner-secretion-system-transporter-TpsB2	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	9.26606e-164
NZ_CP025055.1\|WP_100814894.1\|55883_58790_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|377410	pfam04830, DUF637, Possible hemagglutinin (DUF637). This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.	7.24788e-40
NZ_CP025055.1\|WP_003097345.1\|40254_40470_+\|dodecin-family-protein	gnl\|CDD\|225896	COG3360, COG3360, Uncharacterized conserved protein [Function unknown].	6.39458e-35

>NZ_CP025055.1|WP_086937300.1|59387_60550_-|IS3-family-transposase
MSKQRRTFSAEFKREAAALVLDQGYSHIDACRSLGVVDSALRRWVKQLEAERQGVTPKSKALTPEQQKIQELEARINRLEREKAIFKKGYRSLDVGRTRSYALIDQLSEQESVEVVCSAFDVARSCYYVHRLRRRRVDARRVALRSQVNQLFSQSRGSAGSRSILGMLREEGVTIGRFRVRRLMRELGLVSKQPGSHAYKQATVERPDIPNRLNREFATEHPNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALDMAYEQRGKPQQVLFHSDQGSQYASRLFRQRLWRYRMQQSMSRRGNCWDNSPMERLFRSLKSEWVPSTGYLTAQEAQRDISHYLMHRYNWIRPHQFNDGLPPAVAEEKLNPLSGMG
>NZ_CP025055.1|WP_100814894.1|55883_58790_+|ParB-N-terminal-domain-containing-protein
MPVSDSPHKDQLHLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWNTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGLGAAPSLAIAIVAAAYLGPVYGAMASNLATGTINNGGDFGKGLKFATSSNALKGYAVAGATAYLVSPQLDEMFGVSTDNVNKVTKGFDLSTMSGLGGFATYSIIQGLSQAGIQTAAFGGSFADNLGDAMAGQATNLAMAAGFNLIGDWADGKFDSGSPQKIMAHALMGGLLAQATGGDFKTGAMAAGANEALVNVLSNMAGGEEKLELMASQLTGLLAATVVDGDVAKGAEIAKNATAYNQQVHRDALSRLKRGMSALHEQGKYADLEPEIVLAELQKIASGEAKSVSDLNPKVVQFLNSEFSPASLRETLFEPESWEEYAAIAVDVLYPTPGGKAAAIEKAGGKLSKEALEALEKKFSESTKQELKSKLLQEDPRNLIPTQTKAEMSGSQIKRIVKSIKENGFDQEKPVDVWRNPKTGRLEIQDGHHRTEAAKKAGLDKIPVSIWE
>NZ_CP025055.1|WP_071533944.1|55447_55663_+|hypothetical-protein
MAWLDEGLSRVNQIRRGAIECPDWSRDSWGVELRNGMARIYSLYDEDCSAAIALDDFERALLGWKRFIQAD
>NZ_CP025055.1|WP_123788640.1|54591_54993_+|hypothetical-protein
MIVLGGYLIAPGAKRTQFPVMSDPDEEEVLEALSKLRHSSGVLVLRVKPEPEIGAYEVALHAENGRFIVMLSQHAEDGEHEVFTLRGAGEGNGFTYILGEAYPMAAVTENFGLICNCFKKFLLERKVSSDVWV
>NZ_CP025055.1|WP_034024234.1|42979_54595_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPIVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVKLAGDMAASGGDIRIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIALEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGGSLKGATVRVDGGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNRGDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQLDNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATLGSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVTLKGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGADSLTLRIAQALDNSLGGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVVTGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRLTVERLVQRQGRLIGERGVSLDLRGGDLDNQGGLISARGPLSIERLNVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNTGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLAGQADMSLRLGGGALRNQQDGLIFSQAGALEVQAGSLDNRQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELQLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTADGKLLAVQSFTGRGGDWSNDGLLASDGSLRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGLAGAANVQGQGGSALGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPSGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAIEDRQGQTRWNTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHSFATGKKVTAKNDRVEHQSTVVSAGGDLSVQGGNDVTFVASQAKASNEAYLYAGNDLNLLAAHDESYSYYAKKKKGSFGRSSSRMSESETSTVVSSSIQAGQGAELVAKRDVNVEASSASSMKGELTVVAGRDVNLTAAANSYSSASAKSKSGGLGLSSTSKANAQSSSYTSVQGATLSGDTTVVQARRDISVAASNVVSTGKTALRAGNDIIIDSVAETSESHRSESKKKSGLMSSGGIGITLGTAKNASTQDTRTVVNQGSTIGSVLGDVDMRAGKNLSITASDVVAGKDINLVGQNVSILAADNQNVSEQTRKTSKSGLTLALSGTVGSAIDATYQNAKQARNEDDSRLSALQGIKAGLSGVQAWQAAQQNGGMTGENSAQFVGISASLGSQKSSSRQRQEQQISQGSTLTAGGNLNIIATGSGAVGEDGDLRVQGSKLQAGKDLQLIANRDVVLEAAANTQKLDGKNKSSGGAVGVSVGVGSGEAGISIFANANKGAGKEIGNGTTWTETTLDAGQKASLVSGRDTTLKGAQVNGESILAKVGRDLTLQSLQDRDYYDSKQKNVGGGASLAIVGQGGGANLSLSQSKLHSKYDSVQEQTGLFAGKGGFQVEVGKHTQLDGSVIASTAEAEKNRLSTGSLGWSEIRNKAEYKSQLQSVSVSSANDGAGAFVSNMPSGMLIAYNHGDSASGTTGSAISEGTLEVRDPARQQQDVATLSRDPSRANDSVSPIFDKEKEQKRLQQVQLIGEIGTQAMDILRTQGQLDADKAARAELEARGISAPDAGASERQVEDYRKALLGTNAYQDIMGKYGTGGDYQKAAQAVTAALQGLAGGDIGSALAGASSPYVAGVIKQVAGDNDTARIMAHAVLGAVVAQAQGNSAAAGGAGAAGSELAAQVISERLYGTRDSATLNEAQKQTITALASLAGGLAGSVVDGSSGGAIAGAAGGKNATENNFLGGGTPPGLISYGQAASSLTEYMRKNGATAEEITQAQRDLAQGQGFDGVQPANEFIKAWGEAMVAEAAGLGIVAGLGRFGLWGAKGATPVVTAEGRIGNSVFTDVNQTARPAAQANPNQPTLIADRVDAKIAAKGTPHPNGNMADAHAEIGVIQKAFNEGKTVGSDMTMNVVGKDVCGYCRGDIAAAASKSGLKSLTIQAKDDITGLPKTYYWEVGMKSIREKKI
>NZ_CP025055.1|WP_014603455.1|41178_42867_+|two-partner-secretion-system-transporter-TpsB2
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLDESARRQLLAPYQGRCLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPQAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
>NZ_CP025055.1|WP_003097347.1|40653_40881_+|DUF1161-domain-containing-protein
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
>NZ_CP025055.1|WP_003097345.1|40254_40470_+|dodecin-family-protein
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
>NZ_CP025055.1|WP_003097343.1|39266_40154_+|LysR-family-transcriptional-regulator
MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDVCGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEALVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG
>NZ_CP025055.1|WP_003097340.1|37954_39163_-|tryptophan-synthase-subunit-beta
MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQESKA
>NZ_CP025055.1|WP_003083536.1|61193_61589_+|hypothetical-protein
MPVLALRLTALAALAISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
>NZ_CP025055.1|WP_003083553.1|61853_63107_-|MgtC/SapB-family-protein
MTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL
>NZ_CP025055.1|WP_003083555.1|63425_64799_+|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T
MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSLIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPSVARSFAGLGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHSEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA
>NZ_CP025055.1|WP_003083559.1|65294_65981_+|curli-production-assembly-protein-CsgG
MSHSANKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ
>NZ_CP025055.1|WP_003083569.1|66011_66365_+|DUF4810-domain-containing-protein
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
>NZ_CP025055.1|WP_003083573.1|66361_67027_+|DUF799-domain-containing-protein
MKLARLSGLVAGFTLLALLGGCAPTKSVDYSAFKQAKPRSILVLPPLNESPDVKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD
>NZ_CP025055.1|WP_003083575.1|67041_67425_-|helix-turn-helix-transcriptional-regulator
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
>NZ_CP025055.1|WP_014603458.1|67706_69368_-|hypothetical-protein
MRYARHASRYSLFALAVSAALLPGAGWAANGDLAGARTPPSVACSWDREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD
>NZ_CP025055.1|WP_003083582.1|69977_70118_+|hypothetical-protein
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
>NZ_CP025055.1|WP_003083586.1|70939_72772_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNALLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRTRSDTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFREVQELLPGHLLSWRPNSQAKLRRYWEVRRQEHADDLQSTVQRTRELVTRALGSQLHADVPVCSLLSGGLDSTALTGIAQRIAKAEHGGDINSFSVDFVGQAEQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQAVAAARFPWASRVHLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVYNVPWSIKSRDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAANPVFGIVSREFLAAELEHPEGYFNTQVSRHNLETALALEGWLRLYGLSA

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Crispr_ID: NZ_CP025055_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025055_2

342724-342837

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025055_2

>merge|NZ_CP025055|2|342724-342837|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP025055|2|2|342724-342837|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025055.1\|WP_003084290.1\|335104_336463_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP025055.1\|WP_003084301.1\|339536_340634_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP025055.1\|WP_003084314.1\|347409_347913_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_003118763.1\|348627_349647_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP025055.1\|WP_003084271.1\|330613_331279_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP025055.1\|WP_003084285.1\|334311_335064_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP025055.1\|WP_003084303.1\|340688_341843_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP025055.1\|WP_003112937.1\|332656_334033_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP025055.1\|WP_003084297.1\|336528_337899_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP025055.1\|WP_003084299.1\|338014_339118_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP025055.1\|WP_003084308.1\|343880_346268_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP025055.1\|WP_003084333.1\|352007_352502_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP025055.1\|WP_003084327.1\|351187_351742_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_003084270.1\|329572_330451_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP025055.1\|WP_023098425.1\|348017_348629_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239267
NZ_CP025055.1\|WP_003084339.1\|352506_353199_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP025055.1\|WP_003084273.1\|331339_332401_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP025055.1\|WP_003084312.1\|346378_347431_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP025055.1\|WP_003084320.1\|349666_350419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025055.1\|WP_023656933.1\|350467_351166_+\|proline-hydroxylase	unknown	unknown	gnl\|CDD\|226274

Protein	Function_ID	Function_description	E-value
NZ_CP025055.1\|WP_003084290.1\|335104_336463_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP025055.1\|WP_003084301.1\|339536_340634_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP025055.1\|WP_023098425.1\|348017_348629_-\|hypothetical-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00328866
NZ_CP025055.1\|WP_003118763.1\|348627_349647_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.48481e-56
NZ_CP025055.1\|WP_003084271.1\|330613_331279_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.54898e-08
NZ_CP025055.1\|WP_003084285.1\|334311_335064_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	3.1783e-108
NZ_CP025055.1\|WP_003084303.1\|340688_341843_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP025055.1\|WP_003112937.1\|332656_334033_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP025055.1\|WP_003084297.1\|336528_337899_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP025055.1\|WP_003084299.1\|338014_339118_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP025055.1\|WP_003084308.1\|343880_346268_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP025055.1\|WP_003084333.1\|352007_352502_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NZ_CP025055.1\|WP_003084270.1\|329572_330451_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP025055.1\|WP_023656933.1\|350467_351166_+\|proline-hydroxylase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	1.58503e-77
NZ_CP025055.1\|WP_003084339.1\|352506_353199_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP025055.1\|WP_003084273.1\|331339_332401_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.13028e-163
NZ_CP025055.1\|WP_003084312.1\|346378_347431_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	1.67458e-32

>NZ_CP025055.1|WP_003084303.1|340688_341843_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP025055.1|WP_003084301.1|339536_340634_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP025055.1|WP_003084299.1|338014_339118_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP025055.1|WP_003084297.1|336528_337899_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP025055.1|WP_003084290.1|335104_336463_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP025055.1|WP_003084285.1|334311_335064_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACGKRAGQR
>NZ_CP025055.1|WP_003112937.1|332656_334033_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP025055.1|WP_003084273.1|331339_332401_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPASAQHPRQAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP025055.1|WP_003084271.1|330613_331279_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSIRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_CP025055.1|WP_003084270.1|329572_330451_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNHTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP025055.1|WP_003084308.1|343880_346268_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLIAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRAAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP025055.1|WP_003084312.1|346378_347431_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHGVLTRHAEEQTRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREKGYSTSGT
>NZ_CP025055.1|WP_003084314.1|347409_347913_-|hypothetical-protein
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASTLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP025055.1|WP_023098425.1|348017_348629_-|hypothetical-protein
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLVALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_CP025055.1|WP_003118763.1|348627_349647_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP025055.1|WP_003084320.1|349666_350419_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP025055.1|WP_023656933.1|350467_351166_+|proline-hydroxylase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRIRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESAACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP025055.1|WP_003084327.1|351187_351742_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP025055.1|WP_003084333.1|352007_352502_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP025055.1|WP_003084339.1|352506_353199_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59387 : 112173

Shigella_phage(16.67%)

plate,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086937300.1\|59387_60550_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.3e-85	53.6
WP_003114585.1\|60816_61095_+\|transposase	transposase	NA	NA	NA	NA
WP_003083536.1\|61193_61589_+	hypothetical protein	NA	NA	NA	NA
WP_003083553.1\|61853_63107_-	MgtC/SapB family protein	NA	NA	NA	NA
WP_003083555.1\|63425_64799_+	T3SS effector bifunctional cytotoxin exoenzyme T	NA	NA	NA	NA
WP_003083559.1\|65294_65981_+	curli production assembly protein CsgG	NA	NA	NA	NA
WP_003083569.1\|66011_66365_+	DUF4810 domain-containing protein	NA	NA	NA	NA
WP_003083573.1\|66361_67027_+	DUF799 domain-containing protein	NA	NA	NA	NA
WP_003083575.1\|67041_67425_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014603458.1\|67706_69368_-	hypothetical protein	NA	NA	NA	NA
WP_003083582.1\|69977_70118_+	hypothetical protein	NA	NA	NA	NA
WP_003083586.1\|70939_72772_+	asparagine synthase (glutamine-hydrolyzing)	G9E4W0	Ostreococcus_lucimarinus_virus	6.2e-22	23.7
WP_003083588.1\|72824_73253_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003083590.1\|73460_74009_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	8.0e-34	41.6
WP_003083593.1\|74047_74554_-	DUF1993 family protein	NA	NA	NA	NA
WP_100814895.1\|74619_75540_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003083599.1\|75647_76535_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003083601.1\|76597_77302_+	DsbA family protein	NA	NA	NA	NA
WP_003118563.1\|77385_77841_+	OsmC family protein	NA	NA	NA	NA
WP_003083610.1\|77951_78185_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_003083612.1\|78196_78634_-	hypothetical protein	NA	NA	NA	NA
WP_003083614.1\|78690_79107_-	hypothetical protein	NA	NA	NA	NA
WP_003118564.1\|79198_80326_+	hypothetical protein	NA	NA	NA	NA
WP_003114660.1\|80333_81317_-	hypothetical protein	NA	NA	NA	NA
WP_003083616.1\|81349_82015_-	HAD family hydrolase	NA	NA	NA	NA
WP_003083618.1\|82007_82550_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_003083621.1\|82627_84673_+	oligopeptidase A	A0A1V0SD92	Indivirus	4.6e-34	21.3
WP_003083624.1\|84669_84945_+	YheV family putative metal-binding protein	NA	NA	NA	NA
WP_003083628.1\|85033_86092_+	PA0069 family radical SAM protein	NA	NA	NA	NA
WP_003083630.1\|86321_87236_-	hypothetical protein	NA	NA	NA	NA
WP_003083632.1\|87297_89010_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_003083634.1\|89002_90202_-	ABC transporter permease	NA	NA	NA	NA
WP_003136959.1\|90201_90921_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-18	36.3
WP_014603460.1\|90917_94016_-	protein kinase	M1PCM5	Moumouvirus	1.6e-22	27.4
WP_003083639.1\|94023_94752_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_003083642.1\|94761_95442_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_003083648.1\|95438_98972_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_014603461.1\|98968_100318_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_003115052.1\|100324_101659_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_003083660.1\|101674_102139_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_045404188.1\|102183_103701_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_003083664.1\|104068_105103_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_003083666.1\|105191_105710_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003083668.1\|105722_107219_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003083670.1\|107294_107783_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003119488.1\|107950_108796_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003083674.1\|108797_109307_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003083676.1\|109303_111163_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003083679.1\|111126_112173_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_2

625420 : 721379

101

Pseudomonas_phage(60.29%)

portal,integrase,holin,capsid,tail,head,plate,tRNA,terminase

attL 630658:630674|attR 657429:657445

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003085005.1\|625420_626542_-	Fic family protein	A0A1V0E025	Clostridioides_phage	2.8e-09	26.1
WP_071534354.1\|627552_627735_+	addiction module toxin, HicA family	A0A0U4KLG1	Pseudomonas_phage	3.7e-28	100.0
WP_012077229.1\|627762_628167_+	type II toxin-antitoxin system HicB family antitoxin	A0A0U4ISP5	Pseudomonas_phage	4.2e-72	100.0
WP_012077228.1\|628209_629181_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	1.4e-182	100.0
WP_033896049.1\|629165_629864_-	hypothetical protein	A0A1D9CA29	Salinivibrio_phage	9.5e-40	36.9
WP_012074127.1\|629863_630403_-	hypothetical protein	A0A0U4J942	Pseudomonas_phage	8.0e-95	100.0
WP_012074128.1\|630399_631320_-	hypothetical protein	A5X9J6	Aeromonas_virus	1.3e-17	34.5
630658:630674	attL	NA	NA	NA	NA
WP_012074129.1\|631316_632027_-	hypothetical protein	A0A0U4JEJ6	Pseudomonas_phage	4.7e-135	100.0
WP_025297588.1\|632040_634005_-\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	0.0e+00	100.0
WP_012074131.1\|634016_634541_-\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	5.7e-98	100.0
WP_012074132.1\|634533_635706_-	hypothetical protein	A0A0U4JJ14	Pseudomonas_phage	1.5e-223	100.0
WP_012074133.1\|635702_636023_-	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	4.2e-51	100.0
WP_012074134.1\|636019_638074_-\|tail	phage tail tape measure protein	A0A0U4IJ81	Pseudomonas_phage	0.0e+00	100.0
WP_012074136.1\|638252_638540_-	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	2.0e-44	100.0
WP_012074137.1\|638536_639022_-	lysozyme	A0A0U4JXC2	Pseudomonas_phage	4.2e-79	100.0
WP_012074138.1\|639018_639480_-	lysozyme	A0A0U4JP67	Pseudomonas_phage	1.4e-79	100.0
WP_025297585.1\|639476_639782_-	hypothetical protein	A0A0H5AUD7	Pseudomonas_phage	7.6e-10	40.4
WP_012074140.1\|639781_639991_-	TraR/DksA family transcriptional regulator	A0A0U4IIN4	Pseudomonas_phage	5.2e-34	100.0
WP_012074141.1\|639990_640440_-	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	8.7e-79	100.0
WP_012074142.1\|640443_641559_-	DUF2586 family protein	A0A0U4KLE6	Pseudomonas_phage	5.0e-208	100.0
WP_012074143.1\|641570_642236_-	virion morphogenesis protein	A0A0U4ISN1	Pseudomonas_phage	2.7e-121	100.0
WP_012074144.1\|642228_642666_-\|tail	tail protein	A0A0U4IBS7	Pseudomonas_phage	8.5e-79	100.0
WP_033981251.1\|642667_643129_-\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	2.1e-80	100.0
WP_019725790.1\|643226_643961_-\|terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	7.7e-133	100.0
WP_012074147.1\|643957_644980_-\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	1.1e-193	100.0
WP_019725791.1\|644979_645933_-	hypothetical protein	A0A0U4JVV6	Pseudomonas_phage	2.7e-146	100.0
WP_019725792.1\|646090_648139_+	oxidoreductase	A0A0U4JIZ9	Pseudomonas_phage	0.0e+00	100.0
WP_025982286.1\|648050_648905_+\|portal	phage portal protein	A0A0U4B0L9	Pseudomonas_phage	3.1e-133	100.0
WP_019725794.1\|648949_649207_+	transcriptional regulator	R9TNQ2	Vibrio_phage	3.6e-13	42.9
WP_019725795.1\|649772_650051_-	hypothetical protein	A0A0U4B0R1	Pseudomonas_phage	1.4e-47	100.0
WP_019725796.1\|650047_650278_-	hypothetical protein	NA	NA	NA	NA
WP_019725797.1\|650274_650520_-	Arc family DNA-binding protein	A0A0U4B0M9	Pseudomonas_phage	1.0e-36	100.0
WP_019725798.1\|650512_650779_-	hypothetical protein	NA	NA	NA	NA
WP_019725799.1\|650849_651209_-	hypothetical protein	A0A0U4JXA4	Pseudomonas_phage	3.5e-62	100.0
WP_100199592.1\|651238_651562_-	hypothetical protein	A0A0U4JP55	Pseudomonas_phage	4.4e-56	100.0
WP_019725801.1\|651601_652003_-	hypothetical protein	A0A0U4IIM6	Pseudomonas_phage	6.4e-73	100.0
WP_019725802.1\|652444_655135_-	hypothetical protein	A0A0U3TH43	Pseudomonas_phage	0.0e+00	100.0
WP_019725803.1\|655144_655375_-	hypothetical protein	A0A0U4KLD7	Pseudomonas_phage	8.2e-33	100.0
WP_019725804.1\|655472_655712_+	helix-turn-helix transcriptional regulator	A0A0U4ISL7	Pseudomonas_phage	2.6e-37	100.0
WP_079382046.1\|655716_656886_+\|integrase	tyrosine-type recombinase/integrase	A0A0U4IBS1	Pseudomonas_phage	2.5e-226	100.0
WP_003085029.1\|656935_660673_-	bifunctional diguanylate cyclase/phosphodiesterase	A0A127AWB9	Bacillus_phage	4.8e-13	35.4
657429:657445	attR	NA	NA	NA	NA
WP_003085035.1\|660779_662633_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.2e-36	33.8
WP_003085039.1\|662712_664707_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.8e-73	40.7
WP_003085042.1\|664789_665239_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	5.0e-18	38.8
WP_003085057.1\|665308_665524_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_003085059.1\|665724_666750_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.3e-109	58.1
WP_003085061.1\|666828_667398_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|667481_667835_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003085067.1\|667825_668368_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003085069.1\|668340_669573_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	1.6e-77	43.1
WP_003085071.1\|669616_670123_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003085073.1\|670217_671771_-	SpoVR family protein	NA	NA	NA	NA
WP_003085075.1\|671767_673039_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|673139_675062_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003085081.1\|675340_675673_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003085083.1\|675716_676568_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2R4ALP3	Aeromonas_phage	2.4e-08	44.2
WP_003085085.1\|676567_676948_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003085087.1\|676984_677791_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003085089.1\|677906_678893_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|678889_680182_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003085092.1\|680162_682964_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_031634768.1\|683096_684809_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.8e-281	82.1
WP_003085094.1\|686079_687096_+	phosphotransferase	NA	NA	NA	NA
WP_003085095.1\|687092_687767_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003085097.1\|687768_688527_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_003085099.1\|688527_689589_-	DUF3530 family protein	NA	NA	NA	NA
WP_023098434.1\|689740_692134_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|692179_692812_+	response regulator transcription factor	NA	NA	NA	NA
WP_003085106.1\|692940_693975_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003085109.1\|694208_695318_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003085111.1\|695373_696420_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014604087.1\|696534_697782_+	ABC transporter permease	NA	NA	NA	NA
WP_003085119.1\|697887_698718_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|698841_699516_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003085124.1\|699515_700334_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_003085126.1\|700406_701885_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003085128.1\|702071_702386_-	transcription regulatory protein PrtN	NA	NA	NA	NA
WP_003085129.1\|702485_703256_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	6.1e-72	59.0
WP_003085132.1\|703713_703914_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003085135.1\|703961_704321_+	hypothetical protein	NA	NA	NA	NA
WP_003137382.1\|704683_705133_+\|holin	holin	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003085139.1\|705154_705670_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	4.1e-32	42.9
WP_003085141.1\|705666_706224_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.6e-45	71.1
WP_003085143.1\|706376_706703_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003085151.1\|706699_707587_+	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003137385.1\|707579_708113_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
WP_003085168.1\|708114_710223_+	hypothetical protein	Q9ZXK6	Pseudomonas_virus	2.6e-218	51.1
WP_003085172.1\|710231_710672_+	hypothetical protein	NA	NA	NA	NA
WP_003085173.1\|710714_711875_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_003085175.1\|711887_712391_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085178.1\|712405_712750_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_023098436.1\|712919_715157_+\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_003085182.1\|715166_716039_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
WP_003101635.1\|716013_716220_+	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_003085186.1\|716277_717267_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-106	55.8
WP_100814899.1\|717299_717929_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	2.1e-86	78.0
WP_003085190.1\|717925_718288_+	hypothetical protein	H2BDA0	Pseudomonas_phage	6.5e-16	48.7
WP_003118919.1\|718284_718542_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003085194.1\|718889_719495_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|719496_720546_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085205.1\|720542_721379_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9

DBSCAN-SWA_3

1500227 : 1509256

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_073660134.1\|1500227_1500863_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.3e-40	52.3
WP_003092335.1\|1500908_1501802_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1501906_1502911_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1503337_1503661_-	ferredoxin family protein	NA	NA	NA	NA
WP_003122151.1\|1503727_1506295_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.4e-24	22.1
WP_003092265.1\|1506420_1507428_-	TolB family protein	NA	NA	NA	NA
WP_003092262.1\|1507575_1508082_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092260.1\|1508215_1509256_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5

DBSCAN-SWA_4

2036787 : 2078537

Pseudomonas_phage(94.34%)

transposase,integrase

attL 2061453:2061469|attR 2086452:2086468

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003121473.1\|2036787_2037012_-	hypothetical protein	A0A125RNE4	Pseudomonas_phage	5.5e-34	100.0
WP_044266189.1\|2037085_2037304_-	hypothetical protein	A0SMR1	Pseudomonas_virus	8.0e-30	94.4
WP_003126859.1\|2037300_2037603_-	hypothetical protein	A0A0S4L5F0	Pseudomonas_phage	1.1e-50	100.0
WP_044266192.1\|2037602_2038448_-	hypothetical protein	A0SMQ9	Pseudomonas_virus	8.2e-155	96.4
WP_100814907.1\|2038444_2040655_-	hypothetical protein	A0A0S4L2V2	Pseudomonas_phage	0.0e+00	98.1
WP_023117665.1\|2040868_2041099_-	hypothetical protein	J9SHJ9	Pseudomonas_phage	2.7e-36	100.0
WP_100814908.1\|2041108_2041927_-	DUF2163 domain-containing protein	J9SP65	Pseudomonas_phage	7.7e-166	99.6
WP_034014676.1\|2041913_2043620_-	hypothetical protein	J9SU43	Pseudomonas_phage	0.0e+00	100.0
WP_060853541.1\|2043622_2044546_-	hypothetical protein	J9SWM3	Pseudomonas_phage	1.3e-185	100.0
WP_034014674.1\|2044548_2045508_-	hypothetical protein	J9RWP3	Pseudomonas_phage	9.6e-192	100.0
WP_033990695.1\|2045507_2049359_-	hypothetical protein	A0A0S4L7E6	Pseudomonas_phage	0.0e+00	99.8
WP_003139971.1\|2049585_2050092_-	hypothetical protein	A0A0S4L2X3	Pseudomonas_phage	3.2e-90	100.0
WP_003094267.1\|2050093_2050846_-	hypothetical protein	A0A0S4L1I6	Pseudomonas_phage	4.6e-141	100.0
WP_003139972.1\|2050849_2051059_-	hypothetical protein	A0A0S4L313	Pseudomonas_phage	2.4e-31	100.0
WP_023657076.1\|2051055_2051511_-	hypothetical protein	A0A0S4L2X9	Pseudomonas_phage	1.5e-78	96.7
WP_023442966.1\|2051512_2052022_-	DUF1320 domain-containing protein	A0A0S4L0B5	Pseudomonas_phage	2.3e-91	99.4
WP_003094258.1\|2052029_2052356_-	hypothetical protein	A0A0S4L5D5	Pseudomonas_phage	1.1e-51	100.0
WP_003094256.1\|2052355_2052550_-	hypothetical protein	A0A0S4L2Y0	Pseudomonas_phage	6.0e-29	100.0
WP_003139975.1\|2052596_2053526_-	hypothetical protein	A0A0S4L2T7	Pseudomonas_phage	7.6e-178	100.0
WP_023102437.1\|2053537_2053915_-	DUF2190 family protein	A0A0S4L3C3	Pseudomonas_phage	3.2e-58	100.0
WP_074198081.1\|2053918_2055088_-	peptidase	A0A0S4L0J5	Pseudomonas_phage	3.9e-187	99.7
WP_003139982.1\|2055375_2055945_-	phage virion morphogenesis protein	A0A0S4L546	Pseudomonas_phage	5.4e-102	100.0
WP_003139984.1\|2055941_2057192_-	hypothetical protein	A0A0S4L0Q0	Pseudomonas_phage	8.5e-241	100.0
WP_050159481.1\|2057191_2058670_-	DUF935 family protein	A0A0S4L5M4	Pseudomonas_phage	1.6e-286	99.8
WP_003152193.1\|2058669_2060373_-	hypothetical protein	A0A0S4L072	Pseudomonas_phage	0.0e+00	100.0
WP_003094238.1\|2060374_2060950_-	DUF3486 family protein	J9SNV5	Pseudomonas_phage	7.4e-91	100.0
WP_003139994.1\|2060955_2061252_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.6e-52	100.0
WP_003094234.1\|2061253_2061643_-	hypothetical protein	A0A0S4L2V7	Pseudomonas_phage	5.2e-64	100.0
2061453:2061469	attL	NA	NA	NA	NA
WP_003152190.1\|2061646_2062258_-	hypothetical protein	J9SVN7	Pseudomonas_phage	3.7e-96	92.6
WP_003094230.1\|2062444_2063074_-	transglycosylase SLT domain-containing protein	A0A0S4L2W4	Pseudomonas_phage	4.6e-118	98.1
WP_003094225.1\|2063231_2063489_-	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_003094222.1\|2063701_2064457_+	hypothetical protein	J9SWJ3	Pseudomonas_phage	1.5e-70	77.4
WP_003152183.1\|2064429_2064633_-	hypothetical protein	A0A0S4L2S2	Pseudomonas_phage	1.1e-20	68.7
WP_031633127.1\|2065206_2065398_+	DNA-binding protein	A0A0S4L0D0	Pseudomonas_phage	2.0e-29	98.4
WP_023442735.1\|2065443_2065764_-	hypothetical protein	A0A0S4L532	Pseudomonas_phage	2.2e-52	99.1
WP_124214277.1\|2065790_2066471_+	hypothetical protein	A0A0S4L0N5	Pseudomonas_phage	9.7e-106	99.5
WP_023442737.1\|2066596_2067085_+	hypothetical protein	A0A0S4L5L2	Pseudomonas_phage	8.8e-93	100.0
WP_023442738.1\|2067077_2067338_+	hypothetical protein	A0A0S4L062	Pseudomonas_phage	6.0e-40	100.0
WP_031642102.1\|2067334_2067634_+	helix-turn-helix domain-containing protein	A0A0S4L7B4	Pseudomonas_phage	1.7e-46	100.0
WP_023657068.1\|2067691_2068648_+	hypothetical protein	A0A0S4L093	Pseudomonas_phage	3.5e-154	93.1
WP_031642103.1\|2068652_2070431_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0S4L2U5	Pseudomonas_phage	0.0e+00	100.0
WP_003148490.1\|2070430_2071600_+	AAA family ATPase	A0A0S4L1G1	Pseudomonas_phage	2.7e-212	97.4
WP_003148488.1\|2071601_2071943_+	hypothetical protein	J9RWC3	Pseudomonas_phage	3.9e-55	98.2
WP_003148486.1\|2071939_2072245_+	hypothetical protein	A0A0S4L2V0	Pseudomonas_phage	1.1e-48	99.0
WP_100814931.1\|2072502_2072856_+	hypothetical protein	A0A0S4L050	Pseudomonas_phage	1.1e-60	95.7
WP_003148482.1\|2072848_2073049_+	hypothetical protein	J9SVU3	Pseudomonas_phage	2.7e-32	100.0
WP_003094190.1\|2073041_2073665_+	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	2.0e-110	100.0
WP_003094188.1\|2073666_2074356_+	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	1.3e-126	100.0
WP_003148480.1\|2074357_2074576_+	hypothetical protein	J9STW0	Pseudomonas_phage	2.8e-30	97.2
WP_003129239.1\|2074577_2075045_+	hypothetical protein	J9SH82	Pseudomonas_phage	6.3e-56	100.0
WP_023657063.1\|2075031_2075595_+	regulatory protein GemA	J9RWI3	Pseudomonas_phage	5.0e-100	100.0
WP_003094179.1\|2075597_2075957_+	hypothetical protein	A0A0S4L0M4	Pseudomonas_phage	6.5e-61	100.0
WP_003091407.1\|2076363_2077110_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003091406.1\|2077126_2077930_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_100814909.1\|2078087_2078537_+	Hsp20 family protein	A0A1B1IW69	uncultured_Mediterranean_phage	1.7e-18	38.2
2086452:2086468	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2477201 : 2577976

Liberibacter_phage(16.0%)

transposase,integrase,protease,tRNA

attL 2480521:2480537|attR 2522206:2522220

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090808.1\|2477201_2477672_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_003090806.1\|2478020_2478251_-	DUF2789 domain-containing protein	NA	NA	NA	NA
WP_003090804.1\|2478429_2478627_+	hypothetical protein	NA	NA	NA	NA
WP_003090802.1\|2478692_2479022_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_003090800.1\|2479132_2479507_-	DUF5064 family protein	NA	NA	NA	NA
WP_003090799.1\|2479642_2480086_+	DedA family protein	NA	NA	NA	NA
WP_003090798.1\|2480238_2480556_+	hypothetical protein	NA	NA	NA	NA
2480521:2480537	attL	NA	NA	NA	NA
WP_003090797.1\|2480545_2481445_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
2480521:2480537	attL	NA	NA	NA	NA
WP_003090796.1\|2481667_2481901_+	DUF3509 domain-containing protein	NA	NA	NA	NA
WP_003090795.1\|2481966_2482197_+	hypothetical protein	NA	NA	NA	NA
WP_003090794.1\|2482171_2482690_-	hypothetical protein	NA	NA	NA	NA
WP_003154870.1\|2483284_2484424_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_071534604.1\|2484426_2486088_+	hypothetical protein	NA	NA	NA	NA
WP_003090790.1\|2486087_2487962_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_034082648.1\|2487954_2488362_+	hypothetical protein	NA	NA	NA	NA
WP_023098552.1\|2488749_2489856_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_086005596.1\|2490318_2491332_+	carboxylate--amine ligase	NA	NA	NA	NA
WP_003154856.1\|2491407_2492547_+	peptidase S1	W5SAB9	Pithovirus	1.1e-05	32.4
WP_003154854.1\|2492615_2493743_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	6.7e-27	28.3
WP_003090785.1\|2493732_2494491_+	hypothetical protein	NA	NA	NA	NA
WP_003090784.1\|2494483_2495578_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	8.2e-38	34.4
WP_003090783.1\|2495577_2496525_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_023098554.1\|2496524_2497253_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_003090782.1\|2497255_2497849_+	TerD family protein	A0A2I7QY07	Vibrio_phage	2.4e-23	37.4
WP_003154850.1\|2497845_2499027_+	stress protein	NA	NA	NA	NA
WP_003090780.1\|2499074_2499524_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_003090778.1\|2499536_2500571_+	TerC/Alx family metal homeostasis membrane protein	A0A291LBC5	Escherichia_phage	6.5e-69	45.9
WP_003090777.1\|2500599_2501178_+	TerD family protein	K4JRX3	Caulobacter_phage	2.5e-30	39.8
WP_003090776.1\|2501213_2501792_+	TerD family protein	NA	NA	NA	NA
WP_003090774.1\|2502055_2503387_+	hypothetical protein	NA	NA	NA	NA
WP_023104035.1\|2503499_2504693_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_077565896.1\|2504918_2505938_+	glycerate kinase	W6LM47	Streptococcus_phage	1.1e-36	39.0
WP_003090772.1\|2505934_2508901_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	96.8
2507799:2507815	attR	NA	NA	NA	NA
WP_003090771.1\|2508904_2509465_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.8e-57	96.8
2507799:2507815	attR	NA	NA	NA	NA
WP_023098450.1\|2509905_2511336_-\|transposase	IS1182-like element ISPa7 family transposase	NA	NA	NA	NA
WP_000845048.1\|2511512_2512526_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000381802.1\|2512671_2513205_+	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
WP_000679427.1\|2513361_2513709_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|2513702_2514542_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000050481.1\|2514946_2516488_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001027119.1\|2516869_2517433_+	trimethoprim-resistant dihydrofolate reductase DfrA10	A0A0B6VT49	Edwardsiella_phage	1.5e-11	29.2
WP_000679427.1\|2517469_2517817_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|2517810_2518650_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|2518777_2519278_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001381192.1\|2519246_2520239_-	AAA family ATPase	NA	NA	NA	NA
WP_000935451.1\|2520241_2521957_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003090694.1\|2523140_2524391_+	TerD family protein	NA	NA	NA	NA
WP_023083423.1\|2524540_2525152_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_023083424.1\|2525550_2525853_-	hypothetical protein	NA	NA	NA	NA
WP_003090692.1\|2525943_2527344_-	DEAD/DEAH box helicase family protein	I4AZM6	Saccharomonospora_phage	2.1e-38	32.2
WP_003090691.1\|2527343_2527931_-	hypothetical protein	NA	NA	NA	NA
WP_003119937.1\|2528032_2528260_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003090688.1\|2529008_2529230_+	ParD-like family protein	NA	NA	NA	NA
WP_003090687.1\|2529226_2530009_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_003090686.1\|2530062_2530296_+	hypothetical protein	NA	NA	NA	NA
WP_003090684.1\|2530494_2530782_+	DUF3509 domain-containing protein	NA	NA	NA	NA
WP_003090682.1\|2531106_2531283_-	hypothetical protein	NA	NA	NA	NA
WP_003090681.1\|2531367_2531694_-	hypothetical protein	NA	NA	NA	NA
WP_003090679.1\|2531885_2532749_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003090677.1\|2532998_2534921_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.1e-128	38.5
WP_003099089.1\|2534938_2535472_+	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	2.0e-13	38.1
WP_003090673.1\|2535533_2535728_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_003099086.1\|2535751_2536108_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_003090666.1\|2536205_2537222_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	7.9e-27	33.3
WP_003090664.1\|2537256_2539635_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003090661.1\|2539638_2539941_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.0e-11	38.9
WP_003090655.1\|2539921_2540278_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_023098559.1\|2540619_2542698_+	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	7.4e-40	34.4
WP_014603868.1\|2542694_2544074_+	DNA protection protein	NA	NA	NA	NA
WP_014603867.1\|2544144_2545641_+	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	3.3e-146	55.5
WP_014603866.1\|2545637_2547161_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	6.7e-139	57.7
WP_014603865.1\|2547157_2549062_+	AAA family ATPase	NA	NA	NA	NA
WP_003090631.1\|2549058_2550735_+	ATP-dependent helicase	A0A1V0SAC2	Catovirus	7.2e-09	26.0
WP_014603864.1\|2550731_2551883_+	restriction endonuclease subunit S	A0A240FAT6	Liberibacter_phage	3.4e-42	46.6
WP_003090627.1\|2551887_2554881_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.1e-198	40.3
WP_086937300.1\|2555194_2556356_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.3e-85	53.6
WP_049285002.1\|2556530_2557391_-	WYL domain-containing protein	NA	NA	NA	NA
WP_003090625.1\|2557396_2561296_+	ATP-binding protein	NA	NA	NA	NA
WP_003090623.1\|2561292_2561940_+	hypothetical protein	NA	NA	NA	NA
WP_003090621.1\|2561936_2563187_+	hypothetical protein	NA	NA	NA	NA
WP_019486382.1\|2563183_2564020_+	hypothetical protein	NA	NA	NA	NA
WP_087819173.1\|2564298_2565437_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.7e-47	38.7
WP_153549517.1\|2565502_2565646_-	hypothetical protein	NA	NA	NA	NA
WP_123788669.1\|2565748_2566282_-	hypothetical protein	NA	NA	NA	NA
WP_003090617.1\|2567795_2569145_-	hypothetical protein	NA	NA	NA	NA
WP_023098564.1\|2569141_2575438_-	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_003090610.1\|2575452_2576091_-	radical SAM protein	NA	NA	NA	NA
WP_004350147.1\|2576092_2577976_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2L0V0F4	Agrobacterium_phage	7.5e-39	28.3

DBSCAN-SWA_6

2714027 : 2720921

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090402.1\|2714027_2715308_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.4e-97	45.2
WP_003108773.1\|2715309_2716707_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003090397.1\|2716711_2717686_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_023098569.1\|2717773_2718757_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.0e-140	73.4
WP_003090393.1\|2718753_2719089_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
WP_003090391.1\|2719085_2719391_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090389.1\|2719390_2719750_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_003090387.1\|2719746_2720142_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090386.1\|2720252_2720921_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1

DBSCAN-SWA_7

4364255 : 4379268

Pseudomonas_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003109262.1\|4364255_4365116_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	7.2e-05	34.2
WP_003086848.1\|4365125_4365650_-	DUF2937 family protein	NA	NA	NA	NA
WP_003082680.1\|4365676_4366450_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_003086845.1\|4366453_4366915_-	HIT family protein	NA	NA	NA	NA
WP_003086834.1\|4366978_4367452_-	hypothetical protein	NA	NA	NA	NA
WP_003086828.1\|4367600_4369652_+	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	1.6e-26	33.5
WP_023098699.1\|4369728_4370268_+	signal peptidase I	NA	NA	NA	NA
WP_157814505.1\|4370274_4370538_-	TonB-dependent receptor	NA	NA	NA	NA
WP_003121473.1\|4370547_4370772_-	hypothetical protein	A0A125RNE4	Pseudomonas_phage	5.5e-34	100.0
WP_044266189.1\|4370845_4371064_-	hypothetical protein	A0SMR1	Pseudomonas_virus	8.0e-30	94.4
WP_003126859.1\|4371060_4371363_-	hypothetical protein	A0A0S4L5F0	Pseudomonas_phage	1.1e-50	100.0
WP_044266192.1\|4371362_4372208_-	hypothetical protein	A0SMQ9	Pseudomonas_virus	8.2e-155	96.4
WP_100814907.1\|4372204_4374415_-	hypothetical protein	A0A0S4L2V2	Pseudomonas_phage	0.0e+00	98.1
WP_023117665.1\|4374628_4374859_-	hypothetical protein	J9SHJ9	Pseudomonas_phage	2.7e-36	100.0
WP_100814908.1\|4374868_4375687_-	DUF2163 domain-containing protein	J9SP65	Pseudomonas_phage	7.7e-166	99.6
WP_034014676.1\|4375673_4377380_-	hypothetical protein	J9SU43	Pseudomonas_phage	0.0e+00	100.0
WP_060853541.1\|4377382_4378306_-	hypothetical protein	J9SWM3	Pseudomonas_phage	1.3e-185	100.0
WP_034014674.1\|4378308_4379268_-	hypothetical protein	J9RWP3	Pseudomonas_phage	9.6e-192	100.0

DBSCAN-SWA_8

4385236 : 4409347

Pseudomonas_phage(100.0%)

transposase,integrase

attL 4397215:4397229|attR 4407361:4407375

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023442966.1\|4385236_4385746_-	DUF1320 domain-containing protein	A0A0S4L0B5	Pseudomonas_phage	2.3e-91	99.4
WP_003094258.1\|4385753_4386080_-	hypothetical protein	A0A0S4L5D5	Pseudomonas_phage	1.1e-51	100.0
WP_003094256.1\|4386079_4386274_-	hypothetical protein	A0A0S4L2Y0	Pseudomonas_phage	6.0e-29	100.0
WP_003139975.1\|4386320_4387250_-	hypothetical protein	A0A0S4L2T7	Pseudomonas_phage	7.6e-178	100.0
WP_023102437.1\|4387261_4387639_-	DUF2190 family protein	A0A0S4L3C3	Pseudomonas_phage	3.2e-58	100.0
WP_074198081.1\|4387642_4388812_-	peptidase	A0A0S4L0J5	Pseudomonas_phage	3.9e-187	99.7
WP_003139982.1\|4389099_4389669_-	phage virion morphogenesis protein	A0A0S4L546	Pseudomonas_phage	5.4e-102	100.0
WP_003139984.1\|4389665_4390916_-	hypothetical protein	A0A0S4L0Q0	Pseudomonas_phage	8.5e-241	100.0
WP_023657075.1\|4390915_4392394_-	DUF935 family protein	A0A0S4L5M4	Pseudomonas_phage	4.2e-287	100.0
WP_023657074.1\|4392393_4394097_-	phage protein gp28	J9SHP2	Pseudomonas_phage	0.0e+00	100.0
WP_003094238.1\|4394098_4394674_-	DUF3486 family protein	J9SNV5	Pseudomonas_phage	7.4e-91	100.0
WP_003139994.1\|4394679_4394976_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	4.6e-52	100.0
WP_003094234.1\|4394977_4395367_-	hypothetical protein	A0A0S4L2V7	Pseudomonas_phage	5.2e-64	100.0
WP_023657073.1\|4395370_4395982_-	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	3.5e-99	97.5
WP_023657072.1\|4396162_4396792_-	transglycosylase SLT domain-containing protein	J9SHG5	Pseudomonas_phage	2.9e-120	100.0
WP_003094225.1\|4396949_4397207_-	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
4397215:4397229	attL	NA	NA	NA	NA
WP_058177664.1\|4397419_4398175_+	hypothetical protein	J9SWJ3	Pseudomonas_phage	7.5e-75	81.5
WP_003152183.1\|4398147_4398351_-	hypothetical protein	A0A0S4L2S2	Pseudomonas_phage	1.1e-20	68.7
WP_003094219.1\|4398396_4398900_-	hypothetical protein	J9RWD8	Pseudomonas_phage	1.2e-81	94.6
WP_023127888.1\|4398917_4399289_-	helix-turn-helix domain-containing protein	J9SH16	Pseudomonas_phage	2.6e-20	98.1
WP_003094216.1\|4399394_4399625_+	DNA-binding protein	J9SNE2	Pseudomonas_phage	3.2e-37	100.0
WP_023127889.1\|4399909_4400134_-	hypothetical protein	NA	NA	NA	NA
WP_023127890.1\|4400257_4400746_+	hypothetical protein	J9SVV8	Pseudomonas_phage	2.8e-91	100.0
WP_003094213.1\|4400738_4400999_+	hypothetical protein	J9RWD0	Pseudomonas_phage	1.6e-40	100.0
WP_003094211.1\|4400995_4401310_+	hypothetical protein	J9SH06	Pseudomonas_phage	1.2e-50	100.0
WP_003094208.1\|4401319_4402297_+	hypothetical protein	J9SND0	Pseudomonas_phage	8.9e-161	100.0
WP_003094203.1\|4402300_4404085_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	98.7
WP_003094200.1\|4404084_4405251_+	AAA family ATPase	J9SHF3	Pseudomonas_phage	1.8e-216	100.0
WP_003094197.1\|4405252_4405594_+	hypothetical protein	J9SNT1	Pseudomonas_phage	9.3e-57	100.0
WP_003094195.1\|4405590_4405872_+	hypothetical protein	J9STZ0	Pseudomonas_phage	3.3e-44	100.0
WP_003094193.1\|4405871_4406246_+	hypothetical protein	Q5ZR08	Pseudomonas_phage	3.9e-64	94.4
WP_003094191.1\|4406238_4406439_+	hypothetical protein	J9RWL7	Pseudomonas_phage	5.1e-31	98.5
WP_003094190.1\|4406431_4407055_+	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	2.0e-110	100.0
WP_003094188.1\|4407056_4407746_+	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	1.3e-126	100.0
4407361:4407375	attR	NA	NA	NA	NA
WP_003148480.1\|4407747_4407966_+	hypothetical protein	J9STW0	Pseudomonas_phage	2.8e-30	97.2
WP_003129239.1\|4407967_4408435_+	hypothetical protein	J9SH82	Pseudomonas_phage	6.3e-56	100.0
WP_023657063.1\|4408421_4408985_+	regulatory protein GemA	J9RWI3	Pseudomonas_phage	5.0e-100	100.0
WP_003094179.1\|4408987_4409347_+	hypothetical protein	A0A0S4L0M4	Pseudomonas_phage	6.5e-61	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP025055

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection