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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP025095 Streptococcus suis strain HN136 chromosome, complete genome 2 crisprs PrimPol,DinG,RT,csa3,cas3,DEDDh 0 0 16 0

Results visualization

1. NZ_CP025095
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025095_1 16934-17056 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025095_2 501696-501818 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 105198 : 159264 43 unidentified_phage(16.67%) transposase,tRNA,holin NA
DBSCAN-SWA_2 162670 : 247288 59 Staphylococcus_phage(30.0%) transposase,tRNA NA
DBSCAN-SWA_3 419517 : 466660 40 Enterobacteria_phage(40.0%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_4 522034 : 568300 36 Streptococcus_phage(27.27%) transposase,tRNA,protease NA
DBSCAN-SWA_5 697388 : 717187 17 Streptococcus_phage(75.0%) NA NA
DBSCAN-SWA_6 785163 : 830625 63 Streptococcus_phage(98.15%) head,tail,terminase,holin,integrase,portal attL 788309:788326|attR 829375:829392
DBSCAN-SWA_7 1115279 : 1121693 12 Streptococcus_phage(100.0%) protease NA
DBSCAN-SWA_8 1146160 : 1152735 9 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_9 1235923 : 1249399 10 Streptococcus_phage(71.43%) NA NA
DBSCAN-SWA_10 1308288 : 1315983 14 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_11 1499018 : 1563485 55 Streptococcus_phage(20.0%) transposase,protease,holin NA
DBSCAN-SWA_12 1689207 : 1746068 46 Enterococcus_phage(20.0%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_13 1768766 : 1779695 13 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_14 1935725 : 1945601 12 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_15 1948783 : 2021542 95 Streptococcus_phage(83.33%) capsid,transposase,tRNA,holin,tail,integrase,terminase attL 1950564:1950579|attR 2013374:2013389
DBSCAN-SWA_16 2159367 : 2205471 37 Planktothrix_phage(37.5%) transposase,tRNA,protease,integrase attL 2192060:2192075|attR 2205309:2205324
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage