CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP025117	Olleya sp. Bg11-27 chromosome, complete genome	9 crisprs	WYL,DEDDh,cas3,RT,cas3HD,csa3	1	0	1	0

1. NZ_CP025117

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025117_1

• CRISPR_ID: NZ_CP025117_1
• CRISPR_location: 218932-219142
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP025117_1

Consensus_repeat	Method
TAAGGACACCCCTAAAGTCCCCTCGAGGGGACAACCAT	PILER-CR

spacers of NZ_CP025117_1

>1.1|218970|78|NZ_CP025117|PILER-CR
CGAATCAACAGTTTTGACGCTAGTTAAATTGGTAAACATAAAATACAGGGTAACTCTTAACACGCAACACTCCGCAAC
>1.2|219086|38|NZ_CP025117|PILER-CR
CGCAGGGGTGTTCACCCAGCTATGTCAGGAACGCTATT

CRISPR arrays and Neighbor proteins around NZ_CP025117_1

CRISPR arrays

The CRISPR arrays of NZ_CP025117_1

>merge|NZ_CP025117|1|218932-219142|PILER-CR
TACGGACACCCCTAAAGTCCCCTCGAGGGGACAACCATCGAATCAACAGTTTTGACGCTAGTTAAATTGGTAAACATAAAATACAGGGTAACTCTTAACACGCAACACTCCGCAACAATGTCCCCTCGAGGGGACCGCAGGGGTGTTCACCCAGCTATGTCAGGAACGCTATTTAAGGACACCCCTAAAGTCCCCTCGAGGGGACAACCAT

>NZ_CP025117|1|1|218932-219142|PILER-CR
TACGGACACCCCTAAAGTCCCCTCGAGGGGACAACCAT	CGAATCAACAGTTTTGACGCTAGTTAAATTGGTAAACATAAAATACAGGGTAACTCTTAACACGCAACACTCCGCAAC
AATGTCCCCTCGAGGGGACCGCAGGGGTGTTCACCCAG	CTATGTCAGGAACGCTATTTAAGGACACCCCTAAAGTC
CCCTCGAGGGGACAACCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101015404.1|230290_232210_-|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl|CDD|200479
NZ_CP025117.1|WP_101015407.1|235284_236658_-|MFS-transporter	unknown	unknown	gnl|CDD|340871
NZ_CP025117.1|WP_090836448.1|216240_216486_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101015399.1|218461_218827_-|DUF559-domain-containing-protein	unknown	unknown	gnl|CDD|238509
NZ_CP025117.1|WP_101015402.1|222950_225071_-|glycoside-hydrolase-family-97-protein	unknown	unknown	gnl|CDD|371140
NZ_CP025117.1|WP_101015401.1|221520_222945_-|alpha-amylase	unknown	unknown	gnl|CDD|200452
NZ_CP025117.1|WP_101015393.1|210239_213095_+|DNA-polymerase-I	unknown	unknown	gnl|CDD|235591
NZ_CP025117.1|WP_101015405.1|232229_234536_-|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl|CDD|237517
NZ_CP025117.1|WP_101015400.1|219352_221305_-|YgiQ-family-radical-SAM-protein	unknown	unknown	gnl|CDD|234874
NZ_CP025117.1|WP_157814210.1|226757_229220_-|DUF5110-domain-containing-protein	unknown	unknown	gnl|CDD|269884
NZ_CP025117.1|WP_101015395.1|213667_213976_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP025117.1|WP_101015392.1|208667_209705_-|tail-fiber-domain-containing-protein	unknown	unknown	gnl|CDD|379398
NZ_CP025117.1|WP_157814058.1|215196_216135_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101015403.1|225073_226750_-|alpha-amylase	unknown	unknown	gnl|CDD|236543
NZ_CP025117.1|WP_101015391.1|207163_208741_-|hypothetical-protein	unknown	unknown	gnl|CDD|366737
NZ_CP025117.1|WP_101015406.1|234624_235281_-|beta-phosphoglucomutase	unknown	unknown	gnl|CDD|213672
NZ_CP025117.1|WP_101015398.1|216761_217565_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101015396.1|213965_215204_+|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl|CDD|273211
NZ_CP025117.1|WP_101015408.1|236790_237831_-|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP025117.1|WP_157814057.1|213200_213452_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101015404.1|230290_232210_-|glycoside-hydrolase-family-13-protein	gnl|CDD|200479	cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP025117.1|WP_101015407.1|235284_236658_-|MFS-transporter	gnl|CDD|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.9129e-69
NZ_CP025117.1|WP_101015400.1|219352_221305_-|YgiQ-family-radical-SAM-protein	gnl|CDD|234874	PRK00955, PRK00955, YgiQ family radical SAM protein.	0
NZ_CP025117.1|WP_101015393.1|210239_213095_+|DNA-polymerase-I	gnl|CDD|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP025117.1|WP_101015402.1|222950_225071_-|glycoside-hydrolase-family-97-protein	gnl|CDD|371140	pfam10566, Glyco_hydro_97, Glycoside hydrolase 97. This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, form two additional non-catalytic domains. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands.	2.63935e-128
NZ_CP025117.1|WP_101015401.1|221520_222945_-|alpha-amylase	gnl|CDD|200452	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes firmicutes, bacteroidetes, and proteobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.94721e-165
NZ_CP025117.1|WP_101015399.1|218461_218827_-|DUF559-domain-containing-protein	gnl|CDD|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	1.97384e-31
NZ_CP025117.1|WP_101015405.1|232229_234536_-|glycoside-hydrolase-family-65-protein	gnl|CDD|237517	PRK13807, PRK13807, maltose phosphorylase; Provisional.	0
NZ_CP025117.1|WP_157814210.1|226757_229220_-|DUF5110-domain-containing-protein	gnl|CDD|269884	cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z)-like. CtsZ is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain; CtsY belongs to a different subfamily. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.	1.54036e-168
NZ_CP025117.1|WP_101015395.1|213667_213976_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.76709e-09
NZ_CP025117.1|WP_101015392.1|208667_209705_-|tail-fiber-domain-containing-protein	gnl|CDD|379398	pfam13884, Peptidase_S74, Chaperone of endosialidase. This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, pfam12219. The endosialidase protein forms homotrimeric molecules in bacteriophages. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and presumably bind to DNA.	1.56693e-13
NZ_CP025117.1|WP_101015406.1|234624_235281_-|beta-phosphoglucomutase	gnl|CDD|213672	TIGR01990, bPGM, beta-phosphoglucomutase. This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	3.38661e-81
NZ_CP025117.1|WP_101015403.1|225073_226750_-|alpha-amylase	gnl|CDD|236543	PRK09505, malS, alpha-amylase; Reviewed.	3.94739e-142
NZ_CP025117.1|WP_101015391.1|207163_208741_-|hypothetical-protein	gnl|CDD|366737	pfam01640, Peptidase_C10, Peptidase C10 family. This family represents just the active peptide part of these proteins. Residues 1-120 are not part of the model as they form the pro-peptide, which before cleavage blocks the active site from the substrate. The catalytic residues of histidine and cysteine are brought close together at the active site by the folding of the active peptide.	8.66615e-24
NZ_CP025117.1|WP_101015396.1|213965_215204_+|DNA-(cytosine-5-)-methyltransferase	gnl|CDD|273211	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	4.89391e-71
NZ_CP025117.1|WP_101015408.1|236790_237831_-|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	6.34587e-89

Protein sequences

>NZ_CP025117.1|WP_101015399.1|218461_218827_-|DUF559-domain-containing-protein
MRNKIIPYRSDLKLFARQLRKNSTLTEVLLWQNIKQRAYGVQFHRQVPMLNYITDFYCHEIGLVIEIDGSSHDHKVLYDAKRQGELEAYGVTFLRFTNEEVKKNMFSVLLVIEEKVRELSA
>NZ_CP025117.1|WP_101015398.1|216761_217565_-|hypothetical-protein
MKKRLQIINGVAFVCVIVMNYLSNTGLLNNTTIGEISKDYNTLFTPAGYAFSIWGLIYLFLTGFIVYQGRSLFVKVRDDAFILITGWWFLVSCIANCAWIVTWIYGYTLLSSIFIFIILLSLLQIVLKNKMELFDAPISVIVFLWWPFVIYSGWITVASIANVSAVLVKYNWDGFGLSPTFWTVLLIVIATVINITVTWKRNMREFALVGAWALIAIYVANNDANSTVAYAALVAAIILIVSSFAHSFKNRKTNPAIKCMEYFRGKK
>NZ_CP025117.1|WP_090836448.1|216240_216486_-|hypothetical-protein
MYTSISETEKLRHPYYQIMELKNKELQLELNTWSRLELIDWLCWNDRNGIYRDEDSISEMDNILGRNEAIEIMSRQILENQ
>NZ_CP025117.1|WP_157814058.1|215196_216135_+|hypothetical-protein
MDKRKNRVQPIRLSPKFFPLDIHKSMFINDLMISIPQYYAQSWEKTVLESHNPNNKSWQIDITYESPRELGKVKNKFTGNLSLFFATGRSQTSSYRLKWDNEFAIQLAKDYPKSFVRSLEFHIGDEYYKEQRFTEYDIGGFKEQLQVKIVWKNNIPEINIKEFFRVREESQGFPKVFNELSSYLITDYLLSSEDEILRRIQVSDWKLRKNISKEVNENNIYILLNRELKQVYFGETKKSLSQRYPQTQKHHSFDEWTEYCIIQLPPETSEHTRLLVERILIAAGSKLFPNILYIDKPVLDIQNGLILKNRKK
>NZ_CP025117.1|WP_101015396.1|213965_215204_+|DNA-(cytosine-5-)-methyltransferase
MANKKIRVAELFAGVGGFRLGLEKSDFEIVWSNQWEPSTKKQHASEVYEARFGKENHSNEDINQVVTRDVEEIPDHDLLVGGFPCQDYSVATTLHNSKGLKGKKGVLWWSIHSILENKKNKPKYLFLENVDRLLKSPANQRGRDFAVMLQSLNDLGYAVEWRVINAAEYGMPQRRRRVFFIGYHKSTDIYKRLIKSSKTDWLTEEGTIAKAFPVAKNIKIQEVELKGNLVEITNEFNKDGKLSPFHNTGMLVKGIVYTAKTTPNYDGPKIVLGNVLQNGEVTPDFFIDEKDKPKWEYLKGAKKEKRKTKEGFEYNYSEGGMIYPDSLDNASRTIITGEGGKSPSRFKHVVSTSRGLRRLTPIELERLNMFPKNHTKLDGITDAKRAFFMGNALVVGVIERIGKQLFKKITNG
>NZ_CP025117.1|WP_101015395.1|213667_213976_+|helix-turn-helix-transcriptional-regulator
MKTLGETLKEARDRINLILRKVSAEVDIDQSLISKFEKNERKPTKEQLIRLADFYNLSHKDLIISWYSDKIAEDLKYTESTTEILKVAEEKINYYKTQDNGK
>NZ_CP025117.1|WP_157814057.1|213200_213452_+|hypothetical-protein
MMNNFETINTEYLRASRTIETVIVSNENSSTLFFIYNYEGISFRVFKTHIDLIHFFLNKSEGIIHFDNENAVDDFLAQVKLAA
>NZ_CP025117.1|WP_101015393.1|210239_213095_+|DNA-polymerase-I
MSDNKRVFLVDAFALIFRGYYAFIKNPRINSKGVDTSAVMGFMNSLLDVIKRERPDHLAVCFDKGGSADRVEMFEAYKANRDETPEAIKIAVPIIQEILKAMHIPIMVKAGFEADDVIGTLAKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPMFGGGYETWGIPEVQKKFEVTDPLQVIDFLGMMGDASDNIPGLPGVGEKTAKKFLAAYGSMENLLDNTHELKGKMKEKIEANKELGLLSKKLATIMLDVPVTFNAKDFELDQPDIPKVVEIFQELEFRRLIDNFTKTFTSGAEATAIANGEPSEKKTPKVTPKEAESAGAGQFNLFGGDPSSATATTTDDSFARKTAATNSHFYQSVAPGMATTLFIKNLMSQTSVCFDTETTGLNPLIAELVGIAFSWETGKGFYLPFPEDQTEAQAIIETLRPFFEDQTIQKTGQNLKYDIKVLAKYNLQVRGPLFDTMLAHYLINPDMRHNMDILAETYLNYTPISITELIGKKGKNQLSMRDVPLEKQTEYAVEDSDITLQLKEHFEKELGEANTKKLFTDIEVPLLRVLAAMELEGINLDVDFLNSLSEDLNKDIDTLVAKIYEVAGEEFNIASPKQLGVILFEKLKLVDKPKKTKTGQYKTGEDILSALAKEHEIIRNILEYRGLAKLKSTYVDALPLQVEEATGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNDDYILLAADYSQIELRIIAALSEEETMIEAFKNGEDIHASTASKVFNVPLEEVTRDQRSNAKTVNFGIVYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLKKYMSAQVEFARDNGYVKTVLDRRRYLKDINSANAIVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLEAGNYKTKMLLQVHDELVFDVFKPELEEMKTLIKTEMEQAFKMEVPLDVELDTGLNWLEAH
>NZ_CP025117.1|WP_101015392.1|208667_209705_-|tail-fiber-domain-containing-protein
MKLITILAIAISLTMVTTATAQLQVLQNGNTIVGGGNSSFPYATTKLSVNGSTSVKSRLEIMNLNNTNAGWGGQIRFTSNNLSGINHLIADNGAHEMILFPGYSHSDASSRKVSVFGALNVYGYASLAGGGYFSDRNLKENITKLEGSLDKVLKLQGVNFSWKKGVLIKEGDEQVDITSGLPNGKQLGFIAQDVEAVVPEVVNTTSSGYKSLEYHTITALLVEAMKEQQSQIKALEEQLTVLNEVLEKQKEGAFIEENISVSLSQNIPNPFADTAKIKYSLPESYGDGILMISDLQGKALNTIALKVGLDQVLEISSEKLQNGIYLYSMVVEGKVLKTRRFVISK
>NZ_CP025117.1|WP_101015391.1|207163_208741_-|hypothetical-protein
MEYTYIVWLWKGKCLRLDVLLFLNKIDMKTKIINILFFCCLGTHLMPAQNTSSGFVSFEVASKVAENWMNAKGYDKTVDKTASFTNVEVKVGKSLTLYVFNFKEGGFAIVPATNLVIPVLAYNDKSIFNSDRRIDGAQHFLKAYNEAINIHNATGVAMELASEQWNTILTTSSIADCSGQSTLYPSLLEQYGTSRWAGWTNIYNCVTPLAPLAPNASNFNDGIGGTCVPTALSQICAFFRHPFVGVGTGTHTMAIGSAVGQTVSSDFATQAFDYDRMPYALQRQGPADGFGNSSSNDWLYYTDVCSDERNEVGFLTFNLGVAARMNWYSGGTYGSSANWAQDLVDHFDYVWNPSTDYVTTSSATLFKSRLRNSLDNERPVLAAGYNNGGGHCFLYTGYECDNYFFASLGFGGNSDGFYYIFTTDANSEYLNTTYANSQNCATNIRPNCDLPTYYQVPTNTYVNGTVTVEQALIDLTVAGAGNSVQLNSGSEAFFIGGNTVTLNAGTIVDLGAQLHVSIEDCNGPN
>NZ_CP025117.1|WP_101015400.1|219352_221305_-|YgiQ-family-radical-SAM-protein
MQELKLSDWLPTTNKEVKIRGWEALDVILFSGDAYVDHPTFGPAVIGRMLESFGLRVAIVPQPNVNDNLQDFVKMGKPKLFFGVTGGCMDPMISNYNANKKKRDKDAYTPNGDIGFRPDYATSVYSKILKDKWPDTPVLIGGIEASLRRVTHYDYWSDQLMPSILETSKADMLVYGMGEQPLREVVRLLEKGVPFNSINTVLQTAVLLDKGDSIPKNANWEDIEISSHEVCLSDKKQYASNFKVIEQESNKLAARRIFQKVGEKTLMINPPYPTMTEKEIDASFDLPYTRLPHPKYNKRGPIPAFEMIKFSINIHRGCFGGCSFCTISAHQGKFIASRSQESILKEVDTVANMPDFKGYLSDIGGPSANMYQMKGKVQSICDKCVAPSCISPVICSNLDTSHKPLTDLYQAVDKHPKVKKSFIGSGIRHDMLVPEFNKNADPKELDAYTEEVMTKHVSGRLKVAPEHTSDPVLKLMRKPSFKYFHKFKERFDKINIAKGLKLQLIPYFISNHPACEVEDMANLAAETKDLGFQLEQVQGFTPTPMTVATVIYYSGYHPYTLKKVNTPITRKEKDEQHRFFFWYKDENKAWIKKTLNKLGRQDLLKVLLPEKAEKWRKNAPKGDAKNTFNDAVPFNQRKDKAQFKSKKKRR
>NZ_CP025117.1|WP_101015401.1|221520_222945_-|alpha-amylase
MKKIILSLAILTVFACKEEQKQTETKAVSEEKVVLKSISDSVLETAVIYEANIRQYSPEGTFEQFTKDIPQLKQIGVKVIWLMPIFPISETKRKATGGADSKFASEFPEAEQDKYLGSYYAVSDFTKINPEFGTIEDFRTLLTTAHDNGIYVILDWVPNHTGWDHTWLKTNPEFYTQNDKGEVVHPLDTDWTDVADLNYDNQEMRKAMIKDMSYWLTEEGVDGFRCDVAGSVPTNFWQQAIPELRAKKDIFMLAEAWKPELLEDGLFDMGYGWDRHHAMNHIAKGDSDVSEWYTVMKTDAERYATNDILMNFVTNHDENSWNGTVKERMGEASEMMTTLSFLTPGMPLIYSGQEFDLDHRLLFFEKDSFPHTKGNTWALLEKLATLKQSNKALYGGKAPAKYTPIDNGTAILSFSRTNGGDEVVFIANVSKASVNANLPQKGQYLDFMTNQTVVLKGDAIPLAANEYKVFVKQN
>NZ_CP025117.1|WP_101015402.1|222950_225071_-|glycoside-hydrolase-family-97-protein
MKKLLIILVLSLFLASCTSKKEIITEVSSPSDNIKIAFNLNAEGQAYYQVFFNNKTVVDTSYLGFDFSNTTSLSKNLQLINSSVTSTNQTWDMVWGEQETVVNNYNVLKLELQEKTDLKRKVNIVFKAYDDGLGFRYEFPKQDNWDEALITNENTQFNLTEDYKTFWIPGDWDIYEHLYNTTKLSEVNALKYANHSNLAQTYIPENAVNTPVTMVGADGTHLSFHEAALVDYSGMTLKVDTDNFSLTSNLVGSKNTVYKVKRGLPFNTPWRTIQIAKDAPELIESKLIVNLNEPNKLGDMSWFQPMKYTGVWWEMHLGKSTWDYGMTRDDGGNWIDTGKAHGKHGATTENVKRFIDFSAKNNIKGVLVEGWNTGWEHWIGFEDREGVFDFVTPYPDYDLKEVVRYGKEKGVDIIMHHETSAATATYTKQQDAAFALMQSLGIHTVKTGYVGRILPKGEYHHGQYMVKHYNNTVEKAAKYQVAINAHEPIKATGLRRTYPNTISREGLRGQEFNAWSSDGGNPPEHLSIVAFTRMLSGPVDFTPGIFNIKFDEYKKDNQVNTTLAQQLALYVVIYSPVQMAADLVEHYEANPKPLQFIKDVGVDWSATKVLNGVVGDYVTIARKERKTGNWFLGSITDENKRSLEVKFDFLDDNQEYTAIIYKDGKNAHWNDNPLDLEIETITLKKNETLTLNLAEGGGVAISIIKK
>NZ_CP025117.1|WP_101015403.1|225073_226750_-|alpha-amylase
MRKGILLLAITMLIFSCKTKKKEAQDLAENQKPKTMETPFVWEAANLYFLLTDRFNNGDKTNDISYGRTKETGVLRGFEGGDLKGITQKIEAGYFTDLGVNAIWMSPIVEQIHGATNEGTGNTYGYHGYWTKDWTTIDANLGNKADLKNLVDAAHKKGIRVLLDAVINHTGPVTEQDPVWPSDWVRTGPQCDYKNYDNTVTCTLVENLPDIKTESNEAVALPPELVKKWKAEGRYEQEVAELDAFFKATGYPRAPRFYIMKWLSDYITDFGIDGYRVDTVKHTEAYVWQEFKSICDNAFAEFKQNNPDKVLDDTDFYMVGEVYNYGISAGTAFDFGDKKINYFDKAFNSLINFEFKWNAAQQTYEEQFKTYDSILNNDLKNYGILNYLTSHDDGQPFDANREKAFETATRLLLSPGTAQIYYGDESARDLTVEGTVGDATLRSNMNWEELSQKQDLLIHWQKLGQFRRNHPAVGAGQHKMISETPYLFSRSYSKGEYKDDVVIGLDLPKGKQTITVSSVFENGTTVKDFYSGQTLEVKNGTVTIATDANIILIEKQKF
>NZ_CP025117.1|WP_157814210.1|226757_229220_-|DUF5110-domain-containing-protein
MITVLQDNGFAEDNIQSKVVPEGKHNEALWRNNFAEAITWLFEDTIEKREFVSAGFKNNQLEVTVSDGIYNIQFYSPEITETTFVPTADNQKLKPSHAVVLKEAFSDINYNENDAEIILQSKGVTVKITKAPFYIGYWYNGKEVTSEKNGYQKTDDFETISFSLKPDEVLYGGGARALGMNRRGNRLELYNKAHYGYEDRSELMNYTMPIVVSSNKYLIHFDNAPIGFLDLDSKKDNTLTYETISGRKTYQIVVGDSWLDLTKNYTQLTGRQPMPPRWALGNFSSRFGYHSQQEVEATVQKFRDEKIPLDAIIIDIFWFGKTVQGTMGNLAFDRDSFPNPKQMIKGLQDNNVKTVLVTEPFVLTTSKRWEEAVKEDVLAKDTLGNPFTFDFYFGNTGLIDIYNPKGKQWFQNIYKDLSDLGVSGVWGDLGEPEVHPKGLQHATGTADEVHNIYGHNWAELVQEMYSKNAPNTRPFILMRAGSSGSQRFGMIPWSGDVNRTWGGLQSQPEIALQMGLQGLAYMHSDLGGFAGANLDDELYARWLQYGVFQPIYRPHAQEDVPAEPVFRSDKAKALAKQAIELRYKLLPYNYNLVFENNQTGAPLMRALFFEEEDNEKLKTKASTYLWGNDFLVTPIVNPNQTETEVYFPKNSNWFDFYTDKKVNGGQALSVKTEENNIPTYVRGGAFIPTAKPMQSTAEYNGNTLDLHYYFDASVSESKRTLYNDDGATKNAFEKGKYEILEFHSKTTKKALELQFDAEVGSNYATTSKKIKVVIHNFPSDPKRIKTDNKKLDFNYNQISKILSFDVQWNPSSAIKTQIKY
>NZ_CP025117.1|WP_101015404.1|230290_232210_-|glycoside-hydrolase-family-13-protein
MTKLIHIALIVLISVSFSCKEKVGNAKVSEVVTEVKNDIERIEPPNWWVGFKNQQLQLLVKHPNISEAKASIKYPGVSIDKAHKADSPNYLFLGLSIAEHAKAGQFNIYFDFKNGTQLVQTYQLKDRESEAADIQGFDSSDAIYLITPDRFANGDTSNDIDVNLNEKTINRADDYGRHGGDIKGIINHLDYIQEMGFTQIWSCPLLTNDMPESSYHGYAMTDFYQVDPRFGTLEEYQELAAKAKEKGIGLIIDQVANHCGSQHWWMQDLPFKDWVNQQSNFETKQPLANSNHRRTSNQDLYASNRDKTEMTEGWFSARMPDLNQRNPFMANYIIQNSIWWIETLQVSGIRQDTYPYPDKIFMSDWAGAIMDEYPNFSIVGEEWSYNPLLIGYWQKGHENKDGYQSNLRSTMDFAMQNNIVEALNQEESWDKGLVKIYEGLANDFAYASPEDIMIFPDNHDMSRIFTQLKGDVPNTKMALSYLLSLPRIPQLYYGTEILMDDFAKPGDHGLIRTDFPGGWEGDTVNAFSGEGLTDAQKDMQSFLKKVLNYRKTSAAIHDGKTMHFAPFMGTYVLFRSIKEETVVVIINKNETPMTIDLKRFEEVGLHGKTLKNIISGETFKWQDKIILNERGSLLLTTKL
>NZ_CP025117.1|WP_101015405.1|232229_234536_-|glycoside-hydrolase-family-65-protein
MNQDYIQPDNWSIIEEGFDADRVKSSESLFSIGNGAMGQRANFEEQYSGPTFQGSYIAGVYYPDKTRVGWWKNGYPEYFAKVLNAPNWIGINVEINGEQLDLNTCVAITNFRRELNMKEGWLSRTFTATLPNKLEVEVKTTRFLSLDLDEVGAINYQVTPLNGDATIKFQPYLDSGITNEDTNWDDQFWDTLKVTTENDKAFIEAKTMKTGFHTCTFMQASVYLENKKQEQNPEVYQQENAITFTYSLSVAKGQTANVVKFGGYTVDRNHDKTELVSAAKTALLTASEKGFAQLLEVQKQAWDAIWKMSDITIDGDVKAQQGIRFNIFQLNQTYLGKDSSLNIGPKGFTGEKYGGSTYWDTEAYCIPFYMATKDQNVARNLLKYRYNHLEKAIENAEKLGFKNGAALYPMVTMNGEECHNEWEITFEEIHRNGAIAFAIFNYYRYTGDYSYIPEMGLEVLIGIARFWHQRATFSTDKNQYVILGVTGPNEYENNINNNFYTNYLAKWCIDYALENIEKVKEGHHDDYLRITGKTKITHEELHAWEKVADNMYFPYSEKHQVYLQQDGFLDKELITVADLPKVDRPINQKWSWDRILRSPYIKQADVLQGFYFFEDQFSTEELKRHFDFYEPFTVHESSLSPCVHSIQAAKLDQMDQAYTFYLRTSRLDLDDYNKEVEEGLHITSMAGTWMSIVEGYGGMRIKNDMLNFEPRIPKEWDAYSFKVNFRDQILKVNVSQSETTFELEGNTDLNIIVNNNPLTVSPNNLVKA
>NZ_CP025117.1|WP_101015406.1|234624_235281_-|beta-phosphoglucomutase
MNKKGFIFDLDGVIVDTAKYHFLAWQNLAKSIGIDFTHEQNEQLKGVSRVKSLEKILEWGNKTISEELFASLMGKKNEEYLSFIDKMTDEEVLPDVPKILAYLIAQKQPISLGSASKNARPILEKVNLLSKFDAIVDGNDVSKAKPDPEVFLIAAQHLNMKPEDCIVFEDSVAGVQAANSANMISIGIGERNVLHEADYIFSNFTEIENSFIEELINR
>NZ_CP025117.1|WP_101015407.1|235284_236658_-|MFS-transporter
MKKRTLGFFEIWNMSFGFLGIQFGFALQGTSMTRIFQTLGAAPDEIPMLWIAAPLTGLLVQPIIGYMSDRTWSERWGRRKPYFLIGAVLSTMALFFMPYSPILWVAAGLLWILDASINISMEPFRALVADKLPESQRSYGFVMQALIIGIGTWIASSLPEIVSYFGISNSADSGVLPMSVKLSFAIGAFVFLGSILYTVFTTTEYPPEDMEAFKKEKAKKNQFIPDILNNIGNMPLTMKKLGLIQFFSWFAFFTMWSMANPALTEHVFKTPAPIETAYDMTIPAQAEAFNVVNTAFQESSNAIGSAMGVYGLSSMAFALLLVFYTSRKKINRKYVHMASLILGGLGFVLMNYTSPDNLKWCFALIGFAWGSILSMPYAMLSSSVDPKKMGMFMGIFNMFIVIPQIIAALGGINYISGLLGDDAINAMTVAGISLIIAGLCNLLITNKNAITYQAEEI
>NZ_CP025117.1|WP_101015408.1|236790_237831_-|LacI-family-transcriptional-regulator
MKKKITLKQIARELDVSISTVSKALRNSIEISEDTRQKIQAFAKFYNYRPNNIALSLKNRKTKTIGIIIPEIVHHFFSKVISGIEAVANKRGYNVIVGLSNESFSKEVINMEMLANGSIDGFILSIAKETLQQQDYHHFTETINQGMPIVMFDRVVNEINCDKVIVDDILGAKKAVNKLIDTGCENIAIVTTKDYVSVGKLRTQGYLSALEDHKINPKASLILKVDDQLLSEDHLDSLEKEIEILFKNNKKLDGIFAVNELYAITAMKVARKLGLKIPDDIQIIGFTDGVLSKHAVPSLTTVSQHGQKIGEKAAELLINNLEREDEEDIYETVVIETELIERNSTK

Crispr_ID: NZ_CP025117_2

• CRISPR_ID: NZ_CP025117_2
• CRISPR_location: 549492-549680
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP025117_2

Consensus_repeat	Method
GGTTGTCCTGATACTGATGGTGATGGT	PILER-CR

spacers of NZ_CP025117_2

>2.1|549519|54|NZ_CP025117|PILER-CR
ATCGAAGATTCTAAAGATACTTGTCCTGAAGAAGCTGGTTTAGCTGAATTTAAC
>2.2|549600|54|NZ_CP025117|PILER-CR
GTTTCTGACAACAACGATGACTGTCCTCAAGTAAAAGGATTAAAAGCTTTAAAA

CRISPR arrays and Neighbor proteins around NZ_CP025117_2

CRISPR arrays

The CRISPR arrays of NZ_CP025117_2

>merge|NZ_CP025117|2|549492-549680|PILER-CR
GGTTGTCCTGATACTGATGGTGATGGAATCGAAGATTCTAAAGATACTTGTCCTGAAGAAGCTGGTTTAGCTGAATTTAACGGATGTCCTGATTCTGACGGTGATGGTGTTTCTGACAACAACGATGACTGTCCTCAAGTAAAAGGATTAAAAGCTTTAAAAGGTTGTCCTGATGCTGATGGTGATGGT

>NZ_CP025117|2|2|549492-549680|PILER-CR
GGTTGTCCTGATACTGATGGTGATGGA	ATCGAAGATTCTAAAGATACTTGTCCTGAAGAAGCTGGTTTAGCTGAATTTAAC
GGATGTCCTGATTCTGACGGTGATGGT	GTTTCTGACAACAACGATGACTGTCCTCAAGTAAAAGGATTAAAAGCTTTAAAA
GGTTGTCCTGATGCTGATGGTGATGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101015653.1|550275_553023_+|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl|CDD|378929
NZ_CP025117.1|WP_101015649.1|543434_544043_-|superoxide-dismutase	unknown	unknown	gnl|CDD|223678
NZ_CP025117.1|WP_101015658.1|557176_557629_+|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl|CDD|376501
NZ_CP025117.1|WP_101015643.1|535738_536104_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP025117.1|WP_101015656.1|554832_556167_+|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240541
NZ_CP025117.1|WP_101015661.1|559272_560547_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP025117.1|WP_101020823.1|541261_543160_+|amidophosphoribosyltransferase	unknown	unknown	gnl|CDD|215241
NZ_CP025117.1|WP_101015657.1|556442_557084_-|2OG-Fe(II)-oxygenase	unknown	unknown	gnl|CDD|379309
NZ_CP025117.1|WP_101015659.1|557762_558521_+|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl|CDD|277343
NZ_CP025117.1|WP_101015644.1|536276_536570_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101015645.1|536636_537464_+|GLPGLI-family-protein	unknown	unknown	gnl|CDD|273495
NZ_CP025117.1|WP_101015650.1|544237_547381_+|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|237554
NZ_CP025117.1|WP_101015651.1|547455_548649_+|glycine-C-acetyltransferase	unknown	unknown	gnl|CDD|235893
NZ_CP025117.1|WP_101015660.1|558561_559221_-|peptidoglycan-binding-protein	unknown	unknown	gnl|CDD|366659
NZ_CP025117.1|WP_101015655.1|553939_554737_-|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP025117.1|WP_101015648.1|540259_541186_+|sugar-kinase	unknown	unknown	gnl|CDD|238921
NZ_CP025117.1|WP_101015654.1|553022_553874_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP025117.1|WP_101015642.1|535090_535732_+|ribonuclease-H	unknown	unknown	gnl|CDD|260015
NZ_CP025117.1|WP_101015647.1|537772_540130_+|hypothetical-protein	unknown	unknown	gnl|CDD|379720
NZ_CP025117.1|WP_101015662.1|560548_562240_-|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101015653.1|550275_553023_+|PD-(D/E)XK-nuclease-family-protein	gnl|CDD|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	4.37264e-18
NZ_CP025117.1|WP_101015649.1|543434_544043_-|superoxide-dismutase	gnl|CDD|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	7.29328e-108
NZ_CP025117.1|WP_101015658.1|557176_557629_+|6-carboxytetrahydropterin-synthase	gnl|CDD|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	4.16901e-32
NZ_CP025117.1|WP_101015643.1|535738_536104_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.5994e-10
NZ_CP025117.1|WP_101015656.1|554832_556167_+|MATE-family-efflux-transporter	gnl|CDD|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.0456e-97
NZ_CP025117.1|WP_101015661.1|559272_560547_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.07482e-59
NZ_CP025117.1|WP_101020823.1|541261_543160_+|amidophosphoribosyltransferase	gnl|CDD|215241	PLN02440, PLN02440, amidophosphoribosyltransferase.	1.11265e-33
NZ_CP025117.1|WP_101015657.1|556442_557084_-|2OG-Fe(II)-oxygenase	gnl|CDD|379309	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.	1.14338e-24
NZ_CP025117.1|WP_101015659.1|557762_558521_+|UDP-2,3-diacylglucosamine-diphosphatase	gnl|CDD|277343	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.89671e-57
NZ_CP025117.1|WP_101015645.1|536636_537464_+|GLPGLI-family-protein	gnl|CDD|273495	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein. This protein family was first noted as a paralogous set in Porphyromonas gingivalis, but it is more widely distributed among the Bacteroidetes. The protein family is now renamed GLPGLI after its best-conserved motif.	7.74312e-40
NZ_CP025117.1|WP_101015650.1|544237_547381_+|UvrD-helicase-domain-containing-protein	gnl|CDD|237554	PRK13909, PRK13909, RecB-like helicase.	2.08769e-79
NZ_CP025117.1|WP_101015651.1|547455_548649_+|glycine-C-acetyltransferase	gnl|CDD|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0
NZ_CP025117.1|WP_101015660.1|558561_559221_-|peptidoglycan-binding-protein	gnl|CDD|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	2.63502e-08
NZ_CP025117.1|WP_101015655.1|553939_554737_-|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	2.51078e-13
NZ_CP025117.1|WP_101015648.1|540259_541186_+|sugar-kinase	gnl|CDD|238921	cd01946, ribokinase_group_C, Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.4019e-147
NZ_CP025117.1|WP_101015654.1|553022_553874_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.37963e-11
NZ_CP025117.1|WP_101015642.1|535090_535732_+|ribonuclease-H	gnl|CDD|260015	cd13935, RNase_H_bacteria_like, RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. This family includes bacterial ribonuclease H (RNase H) enzymes. RNases are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes. Most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site residues and have the same catalytic mechanism and functions in cells. RNase H is involved in DNA replication, repair and transcription. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription.	4.34536e-63
NZ_CP025117.1|WP_101015647.1|537772_540130_+|hypothetical-protein	gnl|CDD|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	3.09965e-05
NZ_CP025117.1|WP_101015662.1|560548_562240_-|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	8.89347e-171

Protein sequences

>NZ_CP025117.1|WP_101015651.1|547455_548649_+|glycine-C-acetyltransferase
MYSNIKQHLQKEIQDIKDNGLFKEERIITSAQGAEITLDTGERVLNFCANNYLGLSSHPEVIKAAQDTMDTHGFGMSSVRFICGTQDIHKTLEQKISDFYGTEDTILYAAAFDANGGVFEPLLGKEDAIISDSLNHASIIDGVRLCKAARYRYKNNDMADLEQQLIDANKNGARFKIVVTDGVFSMDGLVAPLDQITVLAEKYDAMIMIDECHSAGFIGETGRGTLEEKGVMGKIDIITGTLGKALGGAMGGYTTGKKEIIEVLRQRSRPYLFSNSLAPAIVGASIKVFDMLSNDNSLRDTLEENTKFFKKGMKDAGFDIIDGDSAIVPVMLYDAKLSQTMANMLLKEGIYVIGFFFPVVPRDKARIRVQLSAAHTKEHLEKAIAAFIKVGKALEII
>NZ_CP025117.1|WP_101015650.1|544237_547381_+|UvrD-helicase-domain-containing-protein
MSKTTPFKVYDASAGSGKTFALVKEYLKLLFTATYNDGFKQILAITFTNKAVGEMKTRILDTLKQFSEPEISADTNGMFKAITEELALQPKDVHQKAIVLLNTIMHNYAAFDISTIDGFNHKLIRTFAHDLKIPINFEVELDTPSLLSQAVDSLIAKAGTDKKLTKVLIDFALEKADDDKSWDVSRDFNTIAKLLINDNDLPHLESIKHKTLEDFSGLKSQLIKQIANQEVLIAELANNLLSVFEANGLDQKSFSRGTLFNHFVKISNLEFYKIYDNQLANNIAEGKLYTKTLDSAKAQAIDQLLPQIETVYHKIKATVLDVKFLRAVYKNVTPLSVLNAINKELTLIKEDENKLLISEFNTLISKEIKNQPTPFIYERLGEKFRHYFIDEFQDTSQMQWENLIPLIENTLTGQNLKGEQGTAMLVGDAKQAIYRWRGGKAEQFIGLTKEDNPFPVEKEVVRLEYNYRSYKNVIEFNNQFFEYLSKTSFSSPDYSDLYNKAKQKPVIKHEGYVNLNFLDIQSTDDINQLYPETVFETINQCLENNYNLKDICILVRKKKEGVAIAEYLSDKGVRITSSETMLINNSEDVRLAVNIFRLLVNPNNLEVKIKVLDYIASLNAIEDKHQFFKTHLNLPLQAFFESFKLFDIDCDPTQLVQLSLYDLTESIVRGFNLTKNSNAYIQYFLDIILEFSQKKISDIPGFLDYYDTKKDSLNIVSPSNQNAIQIMTIHKSKGLEFPVVIFPYAQLEIYREMEPKEWFPLDQSQFNGFSKTLINFNKDFEDFGDTGKSIYLKHRSEQELDNMNLLYVALTRPIEQLYVISKKENQTKAGVKFDSYSGLLMNYLMQQGVWNDNQLEYSFGQQKREVIPEEKPETTQETEQFISVAKQDHDIKIITKSGYLWDTEQENAIEKGNLIHDIMAEIKTQEEVTAVIEDYINSGIINKEQSLLLKDTINSIINHPELKEYYSNDYTIYNERDIISKSGAIIRPDRFVIKDNDVIILDYKTGLPDPKYQEQLENYSDILKEMNYSVSKKILIYINDDIKIKTY
>NZ_CP025117.1|WP_101015649.1|543434_544043_-|superoxide-dismutase
MAFELPKLKYAYDALEPNIDARTMEIHYTKHHNGYTTKLNAAIEGTDLEGKSIEDILANLDMKNMAVRNNGGGFYNHSLFWEVMNPEGKGRLSGDLKDAIEAAYGSFEAFKDAFSKAAATQFGSGWAWLCVHKGGKVEVCSTPNQDNPLMPGVTCEGTPILGLDVWEHAYYLNYQNRRPDYIDAFFNVINWNEVERRYAEAK
>NZ_CP025117.1|WP_101020823.1|541261_543160_+|amidophosphoribosyltransferase
MSDALKHECGIALIRLRKPLEFYKEKYGSAFYGVNKMYLMMEKQHNRGQDGAGFASIKMDTLPGERYISRVRSIAQQPIQDIFAQINDRINKELADHPEYQDSVALQKKHIPYIGELLLGHVRYGTFGKNSVESVHPFLRQNNWMHRNLILAGNFNMTNVKELFQSLVDLGQHPKEYTDTITIMEKIGHFLDDAVSKIYKELKNEGYGKHECSPLIAERLKIAKILRRAAKNWDGGYAMAGLIGHGDAFVLRDPAGIRPVYYYTDDEIVVVASERPVIQTVFNVEFDDVKELTPGHALISKKSGAVSIKKILEPLERKSCSFERIYFSRGSDAEIYQERKMLGRLLMPKVLKAIDNDTENSVFSYIPNTAETSFYGMIETVEEHLNEKKTKAILNGNGKLSADQVTSILKERPRIEKIAIKDVKLRTFITEDSSRDDLVAHVYDVTYGVIKPTDNLVIIDDSIVRGTTLKKSIIKMMDRLHPKKIVIVSSAPQIRFPDCYGIDMANLETLVAFNAALALLKENGKYDLVEEVYHRCKAQEGLLDKDVKNFVNEIYDQFTTEQISAKISELLTDDSVKAEVEIIFQPVSNLHKAIPDHLGDWYFTGNYPTAGGNRVVNRAFINFYEGNKERAY
>NZ_CP025117.1|WP_101015648.1|540259_541186_+|sugar-kinase
MSKLVIVGTVAFDAIETPFGKTDKILGGAATYIGLSASNFNVDQAAVSVVGGDFPQEYLDLLTDRNVNIEGVEIVKDGKTFFWSGKYHNDMNSRDTLATELNVLEHFNPVVPENYREAEIVMLGNLHPLVQQGVLDQMTKKPKLAILDTMNFWMDIALDDLISVIKNVDVITINDEEARQLTGEYSLVVAARKIHEMGPKYVVIKKGEHGALLFHDDHMFYAPALPLEEVFDPTGAGDTFAGGFAGYLASSGDISFENMKNAVIYGSTLASFCVEKFGTERMVTLKKEEVNKRLLEFKKLTQFDIELT
>NZ_CP025117.1|WP_101015647.1|537772_540130_+|hypothetical-protein
MIKEETNNLDEVFIIGKKAPFKIKKDTVQYNINSYKDGTERKLQDILKKLPGIEVNETSGLIKYNGKLIETVTLEGDNLFGHNYTLGTKNINVDMVEEVEAIENYSNNTLLKGLDQDGKVALNLKLKKNRTDISGNLELGLGDFKDSSKIANNSSLNLLGINKFYKSFGTVSLNNVGLNNSPFNFSSQASNMEILQELDYFSEKIIPEVSILNVLGEKRANINNQLFSSYNSIFNLNKKLKAKVNLYYIQDKIKTIQLSKSNFTFNNEVFNTFDNTNTSKKPIQYRGDLELKYFNSKSSLLRYTISARDENIQTASSITSNQNTNFNTNLNSENTFLKQHINYTKRISKQKALQIDLHFSTNDLNQEYNINPSFLNTNSNTYDNQNNNQKKNVFELKSTFLGIIKNNKYRFSTGVKSDKQTFNSDLINLSEDNSTLFNNADNNLYYSKKTTYATGSYNWNLGKLKLTPNVSLRLINQKLNNHILDDNQTYNILVFEPSLTLFYKINSVSFLSSNLGLNKNTNPIQYLYTGNILINNRTLLSNIPNLTLQKNQSYSLAYNKNDLFNQSQIMLGVNYIKQEGDFFSNTIITPNSNTVNFFFLPEATESTNFNFSYSKFISALNTNLKLSTFHSIFKYKNIVNNSQLRNNTTNQTKSQLFLKTAFSTQLNFENETTHDYSKTLSELTFTNSAFQNNFKIIYKPSKQIYGTLTANFFIPNLKKRSDSFTFIDTEIWYKPKNKNWQLSISASNLTNENSFLQIQNNDVSINTFSSDLLSRSLLLKFNHNF
>NZ_CP025117.1|WP_101015645.1|536636_537464_+|GLPGLI-family-protein
MLKKILFAFLLFQSLFSYAQKDSTRIFEIEFIRMLTPQNSTKTITSNYKLKVFTEHNISVFANNNATNFSNNLINDDDDDAVFYFDPKGKNISLVYKNYSKNKLLSKGSIAFKDFTIKDSLTIFNWNITEETKKNLGFNCQLAETTFRGRNYRAWFSSELPIGGPWKYDGLPGMILQIETQEPFISFKASQIKSHKIKLHNTKNPFENDKFVTWQQFKDLYKKKAIALSKYTTESDFTTSVISPRMGIERYIEENDKDYTADKDFEKLRESQNEN
>NZ_CP025117.1|WP_101015644.1|536276_536570_+|hypothetical-protein
MKKTLIILALTLCGTNFAKNSVELENELPLDSKFSIETTFNSNDDSCTRSCYATATNTETGETYSISGLSTSGDCFTAAGNCIAKLRIRVQAFIAAN
>NZ_CP025117.1|WP_101015643.1|535738_536104_-|helix-turn-helix-transcriptional-regulator
MNTVIGERIRRLRLDKGKTQEDLAEVLKISQSAYARIEGGNSNSWATHLLAIGQYFEIKPEDIIKQDNIKVDTINTNNGALYNSGTINQLSEKLIEQFEIRLLEQNVLINELKAKIGQLES
>NZ_CP025117.1|WP_101015642.1|535090_535732_+|ribonuclease-H
MGKKKKKYYTVWQGHHKGVFESWNDCKAQIKDYQGAQYKSFATFDAAKEALKGNYFDYIGKKKGFTSELSHEQLKKIGRPNYNSISVDAASSGNPGIMEYRGVETKSKKQLFKQGPFAEGTNNIGEFLALVHGLSFLKKHNSDLLIYTDSKTAMSWVRKKTCNSKLERNAKNKPVYDLVDRAVNWLKENDYKTTIVKWETKAWGEIPADFGRK
>NZ_CP025117.1|WP_101015653.1|550275_553023_+|PD-(D/E)XK-nuclease-family-protein
MTNFIQDVLVDLKNKQANFSELIFILPSRRAGVFLRRELSLILDQTLFAPKIVSIESFVEELSKLKSVSNTELLFQFYNTYIQLTPKSEREDFDTFSKWAQIILQDFNEIDRYLIPQSKIFDYLKAIQDLEHWSLEPNKTEVVTNYLKFWNKLPIYYKNFTKNLIDNKQGYQGLLYREAYNNIKKYIGSTNQQHVFLGFNALNAAEENIIQDLLREDLAVIYWDTDQSFLDNKIHDAGLFIRQHQNNWQHFKTSPFNWKNNHYKSHKNISVFGVPKNIGQAKAIGSILQDLSKNDPSLKKTAVVLGDENLLIPVLNSIPESVQTLNITMGFPLKSIPLASLFEHLFNLQKKANTTYYYKDVISILTHQFIQPLFKNGSAIDLVELINKNNLVYLTEADLKAICKTEAELLSLLFSNWNNDANTGLNNCFKLISTIKEYLSEDKKQNQLGLEYLYRFNTLFNEVLRLNEAYKHIKDIKGLYSIFKELLSSETLDFQGEPLQGLQIMGMLESRVLDFETIIISNVNEGILPSGKSNNSFIPFDVKIENKLPTYKEKDAVYTYHFYHLLQRAKNVYVLYNTEIDTLVGGEKSRFINQLELENIHNINHKILTPKVPSYKKELAIITKTESAISQLKEIARKGFSPSSLTSYVRNPIDFYYQKLLGISDLEEVEETIAANTLGTVVHNTLEKLYIPYKQQLLSVDIVKSLIPQIDKNITLFFKEEYKEGDMTKGKNLIVFEIAKRYVLNFLNLEIADLKKGNSIKIIDLEAETNNVAIKIDGLDFPIQLRGTVDRIDEFNGVTRIIDYKTGKVDQSKVSIVDWEDLTSDYDKYSKSFQVLMYAYMLQQKKITDLPLEAGIISFKNLSEGLLKFTKKDQVRGGNKDTLITEETLAEFEIQLKKLILEIFDPTIDFIEKEL
>NZ_CP025117.1|WP_101015654.1|553022_553874_+|alpha/beta-hydrolase
MIKKNLVLDRKNQKPIVFDVFYNTTKTQKPLVIFCHGYKGFKDWGAWDLVAEQFKNADLFFVKFNFSHNGGTVKQPIDFPDLEAFAENNYSKELQDLDDLINFLLSQNNDYLPEIDINNITLIGHSRGGGIATIKASEDSRITKLVTWASVCAFGKRTSTTGDLEQWQIDGVKYVLNGRTKQQMPHNYQFYLDYKANEERLNIQNCCKKIKVPHLIIHAEDDPSVKFEEALNLHKWNPNSNLLKLENSNHVFDGKHPWIPNTLPEALQTVTTFTTNFIKKSGA
>NZ_CP025117.1|WP_101015655.1|553939_554737_-|universal-stress-protein
MKSILVPVGSSKNAQSHLQYAVDFAEAFGAKVYVIQIYNVYTMSGTMIKVDEILERESLDFLNHHVSKVNTKKVEVIVKTFKGKLVDTIDLVSSDLGIDLILLEPRVNSKKKDVYLGKTSGKIIKQTNIPAVIVPEGFVYKPINSILFALKSAIINKADALKPLINLKNHFNATLNLLLVKTPFHAQKDFKIGDDLKSELTSIKETENATTFQGVLEHYKEFNPDMLCVVRRKRGFFTKMWEKNSILKKEFYVSNFPVLVLSGLK
>NZ_CP025117.1|WP_101015656.1|554832_556167_+|MATE-family-efflux-transporter
MSTSISLKHINKLAIPALIAGISEPILSLTDAAVVGNVQTNPTESLAAIGIVTTFLSMLIWVLGQTRSAISSIISQHVGANSLDKVKDLPAQAIFLITSLSLVIIATTYPFASQIFTLYNASDLILDYSVDYYKIRVFGFPFTLFVIAVFGTFRGLQNTYYPMIIAIIGAGLNVILDFAFVYGIEGIILPMHIKGAAYASVIAQIIMAIISAYLLLTKTAIPLRITLPLNKQIGNFTIMILNLFVRTLALNITLYFATKYATGYGKNYIAAYTIAINLWFLGAFIIDGYASAGNILSGKLLGNKNYKALLKLSERLIKYGVALGVLIAILGGIFYYPIGHIFTQKPEVLKEFYKVFWIVLAMQPLCAIAFIFDGMFKGLGKMKDLRNLLLLSTIFVFLPVLFIADHFNLKLYGIFIAFTFWIIARGFPLIIKFRKQFSPLAQNN
>NZ_CP025117.1|WP_101015657.1|556442_557084_-|2OG-Fe(II)-oxygenase
MSQLFEALDFVENPLYEQIINDIGKQKYAIVDDFFSVEEVDVLRTSILDKHEEDAFKKAAIGNKFDELIVKTIRGDVILWIDEAKSNYAESLFFKKINDLVGYLNKTCFLGILHKEFHYAIYPKATFYKRHLDTFKNDDRRKLSFVCYLNHEDWQPENGGELVLYLDDNGQEVEKVVYPFPGRVVIFESQILEHEVKPVNTKRLSITGWLKTR
>NZ_CP025117.1|WP_101015658.1|557176_557629_+|6-carboxytetrahydropterin-synthase
MSNIRITKQFTFETGHALYGYDGKCKNVHGHSYKLDVTVIGTPISDSDNAKFGMVIDFTDLKKIVKEEIVDVFDHATVFNKNTPHVHLAKELKDRDHNVLLVDYQPTSEMMVIDFAQKIKNRLPNGIKLHSLKLSETATSYAQWYASDNG
>NZ_CP025117.1|WP_101015659.1|557762_558521_+|UDP-2,3-diacylglucosamine-diphosphatase
MQIPKGKKIYFASDNHLGAPTKALSLPREKKFVAWLDMVKEDAAAIFLLGDMFDFWMEYKRVIPKGFTRTLGKLAEISDSGIPIYYFVGNHDLWMDGYFEEELNIPVYHKPKEFTFNNKTFFIGHGDGLGPEDKGYKRMKKVFTNPVAKWLFQRLLHPDFALRLGQYMSVKNKMISGDDDAKFLGNDKEWLVQYCKRKLETKHRDYFVFGHRHLPLNIDLSNNSKYVNLGDWIHYFTYSVFDGENMELKEYN
>NZ_CP025117.1|WP_101015660.1|558561_559221_-|peptidoglycan-binding-protein
MKKLLISIIVIIIAIFAYNQYKTYQRFNPENTNYNVSQMIDIDYYDQEVVFGYHDAVQSLNAYITMQWSANGIDVISPENEEAETVLAVDRYANKMAKVKFYEVKLEQSKRLKDKGFSNKGVQLFENTGLTEEVYNKKIEADKFRNRLLSELPKSYLRSGEKSAFIYEVQKLLVKKGYDIPLDGVYKSITEKAILDFETKANLFADGNIDQLTLEALLD
>NZ_CP025117.1|WP_101015661.1|559272_560547_-|MFS-transporter
MAKNDPYAALRIREFNIFLLLRFALVFGWSMQFIVIEWEVYTLTKDPLYLGLIGLMEIIPAFSMALFAGHIVDQREKRNLLALCIAAFSLISLGLFLLTWDTVVGHWETNTILYCIYALVFFGGFLRSFFGPTIFSLIALLVPKKIYPNAATWSSSTWKAATVLGALFGGFFIGWIGVASTLCIVFVLVALAFVITFQIEKKPILNPNIGESVKESLKVGLKFVFNNKAILGALSLDMIAVLFGGAVALLSVFAQDILHVGPKGFGVLNASISIGSILTMFITTYLPVSKNAGKKLLISIFGFGICIIIFGMSKLFWVSVAALFFSGVTDGVSMVIRQTILQLKTPDHMRGRVASVNSMFVGSSNELGAFESGIAAKYLGGAARAVIFGGVMTLLTVAAIGAKNKTLRNLDLTKDIEDHEKEEE
>NZ_CP025117.1|WP_101015662.1|560548_562240_-|single-stranded-DNA-specific-exonuclease-RecJ
MRWTLKPKPNPETVKSLADSLQIDAPIASLLVQRGIENFEDAKSFFRPSLDHLHDPYLMKDMDKAVVRIEHAIANDENILVYGDYDVDGTTSVALMSSYLKTKTPLVATYIPDRYGEGYGVSYKGIDFAEDNDFGLIIALDCGVKAVDKVAYAKEKNIDFIICDHHRPGAVMPDAVAVLDPKQADCNYPYKELCGCGVGFKLIQALAGKDGQTIDDLLPYLDLVATAIGADIVPITGENRILAYHGLKVVNQKSRAGFRAIINQLKKDTLTITDVVFTIAPRINAAGRMKHGQYAVDLLTEVDFATAVTYAEEIEEFNTDRRETDKTITVEALAQIIENKEEQRLTSVVYQEDWHKGVIGIVASRLIETYYRPTLVFTKSGDKLAASARSVSGFDVYNALEACSEHIEQFGGHMYAAGLTLKEENYEAFKQAFEDEVSKTIDKNLLTPEIRIDTTLELSAIDDKFWRIVKQFAPFGPGNMTPIFMTEDLKDTGYGKCVGEDDKHIRCTVTQSDREKFVCIGFNLGDKLNLVKDKKRFKAVYSVDENHWQGNVSLQLKLRDLKE

Crispr_ID: NZ_CP025117_3

• CRISPR_ID: NZ_CP025117_3
• CRISPR_location: 1004098-1004277
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP025117_3

Consensus_repeat	Method
TTAAATGTTGTCGCACTTTCAAACATAGAA	PILER-CR

spacers of NZ_CP025117_3

>3.1|1004128|52|NZ_CP025117|PILER-CR
TGCATGTTGGTTACCGCAATTGGAACCCAATTATCTAAAGGCATATTGAAGT
>3.2|1004210|45|NZ_CP025117|PILER-CR
CTCATGTCGGTAACGGCAGTGACACTCCAGCTATTAATATTTTGG

CRISPR arrays and Neighbor proteins around NZ_CP025117_3

CRISPR arrays

The CRISPR arrays of NZ_CP025117_3

>merge|NZ_CP025117|3|1004098-1004277|PILER-CR
TTAAATGTTACCGCACTTTCAAACATAGATTGCATGTTGGTTACCGCAATTGGAACCCAATTATCTAAAGGCATATTGAAGTTTGTAGCACTTTCAAACATAGAACTCATGTCGGTAACGGCAGTGACACTCCAGCTATTAATATTTTGGTTAAATGCTGTCGCATTTTCAAACATAGAA

>NZ_CP025117|3|3|1004098-1004277|PILER-CR
TTAAATGTTACCGCACTTTCAAACATAGAT	TGCATGTTGGTTACCGCAATTGGAACCCAATTATCTAAAGGCATATTGAAGT
TTGTAGCACTTTCAAACATAGAACTCATGT	CGGTAACGGCAGTGACACTCCAGCTATTAATATTTTGGTTAAATG
CTGTCGCATTTTCAAACATAGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	unknown	unknown	gnl|CDD|100004
NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	unknown	unknown	gnl|CDD|223431
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|371704
NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	unknown	unknown	gnl|CDD|367610
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	unknown	unknown	gnl|CDD|153235
NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	unknown	unknown	gnl|CDD|378271
NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	9.72812e-20
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	gnl|CDD|367610	pfam03691, UPF0167, Uncharacterized protein family (UPF0167). The proteins in this family are about 200 amino acids long and each contain 3 CXXC motifs.	1.46144e-53
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	gnl|CDD|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	6.58072e-40
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.91749e-09
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	gnl|CDD|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.34081e-25
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	0.00234315
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	8.04922e-51
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	gnl|CDD|378271	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071). This conserved protein (similar to YgjF), found in various prokaryotes, has no known function.	0.000313985

Protein sequences

>NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MNITKKTITLAIIIGFTYCLKAQQTPTFSEYNYNPFIINPAYAGLTENTEFTLSNTGFFNQFEGSPKSFSFSGHGSLNRNKIGIGAGITRDQIGVTTSTSFFAAYSYKIFFDFKSNRPYWQLYDAGVLSFGITAGLQQYQSNLTELGILDDPKFSQDINATIPTIGFSFLFNHASFYVGFSTPNVMGDSLASDSNLVLNSPYYGYFGYRIYNNRFEDFMIKPNILLKHEDGAPLQADFNVSLSFKNKLEIGTGYRTSNSINFLAGVYLFNNLRAIYTYNLASKNTTFGNTHGIILSLQLGDGYSKN
>NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein
MRIAISQDDDQLKKELTEKFSDYKTEYSDADIGGGADLWITIIVIVGTIFSQGKNINENLEAWKEIGNKILSLFSKKNKPRFIDKEASIALAISRICQKTKVNDIELINSQAIIGKETNTKGFKLNFAPLDYYILTFKVNGIENFVFCIKSNGEIRFQDYFEHSEWNYEFDWNSYDDREDYTS
>NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein
MKNSLILLFLLISIQSFAQYYEGQNFCDELIDKSFFPIDIKEKKILWTNTYYAETKNGTKEINGKTYVEFLQKWKGNNTDKLYLREENGVIYQYEQCCEQETIRFDETFEKDHSWKTADALGEYKILTFIGKLKTPFCEYENLMIIEAKLESGNFNFYYQRGHGYIGATVENKLISCETPTFDLD
>NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein
MKTGLNVTNFTGGDADRNNLFSFHVGGFAEFELNETISIQPELLYSRQGSEAGNAIKVKVDYLVIPILAKYYLSEKFSIDAGPQFSFLVNDKAEFNDSSIPDADTDASSFDFGLNVGFGYAITTNLLAQVRYNYGITTVAENPDIKNSVFQVSLGYKL
>NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein
MNTNNFAPHYTRLQTSKKGHYNLFLFNTGMPFLRKTNTMTKTIVLLLLITYACKEHKREQVKAFYTDTEKLNLKGRIKSRTGYVVKDSVKTISFNDNFNEIGFLIERHIYNFYGNVWINETYDYKNNTLQKISTHFPNDSILKIRHYLYKGNTTEIHQFENTIPTISEIEKIDDNKNKIYSALITEKDTLSTFFKYDDANNLISEKVYSNNQKLVQDINHTFNSDNLETKTEQNYSNYYGENTNYTISYLYDSAHNKTGVKTYKNGVLDTEEKRNYYNKNSAEHLFFNKSRPTKVIRYTYDNKGNIIRESHKDLATNQIDTTVYLIEYYD
>NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein
MSNGFTAHNNTINIQNLTNGSYMLKLDNKHTFKFIKK
>NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein
MKNTIILLYCMTISSCKVQSQTTINTITDAFATVKTNVDTTKQGTSVHIDTTVLSNCNYTITQFKYSSSGKIINFKLTDSSAIQWSTIVTEDIGLPPTLLKYTVSKIDNTIVFKKDNLVLQNTDPEYASITNTFIVDALALKAHQRQNTKQLKNGKLITIDLGQTVALDNKTALTLTEFVTKRVYKEQPSYARADLQLVTDNTTTAFRFIKRFLQDIAYPQDTVIPEYLTGYTFRLITFKFNESVTILVSKYHID
>NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein
MKHLLSCMLILNLAIGYSQTELNTITYSKQELSFLLDSIGQLDSNRWTKKMSNLVDSTLNKQTKLHHTLNALDFETLKTVVQNGSIEIALAKQIFNETVFDSNTINNDRLPITYYSFDKNEKDYNEFAIIMGDSFLWYTTVYFFKSNMIIAKHRIFHRYGLEIKHFKNKYDDTIFYYTVNYQSGSGIWWNQFNFYSYNKDDIRPVLTEIKNSNLQAPWGSRSYNIEATITNTNPLVFQFKYENQLTDTTNNTVAFNNDVTKVTYQYNMTDKKYVPNFTNTTLNRPKLLSYFITDNDLLFVNSNYQLFRKQLNNKNKLKQDAALNFLNALKNRLNAY
>NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein
MHTIKISIKVNGTDAPAKETILNKSSNTAFLEAPDTQSILSTLITTVTTVKKEQKVFEFNYTITHLDADQNIINTIDCYDFFDEVIKHDGLTSQIIAYTKATDHGEYDSRIWLDDETPAGTCAILALVTNDVKWIPEYIAFLRTCDLDHEVDQSGDISNIVEQYGWCETTLSLAISRLFSCHGQHGTEDIEQMLDNGLSDFVQENNQLFAQKLKEEIHYTSKSLSVVNQSKQNYIDAIFKDDLALFLDYLQDKTITSITNDLTCIWETINDK
>NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein
MAIVPNYATFILPFHNNTNSSVDTNLKGVPNTNADGYKIITDTITERNHMTNSALNRILL
>NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein
MTPKELSLLQESELKTAFITYFKPWALTVPCLEILKTIATKIVAIHYDKALKITFENEDEDEVNITFGAPYQGDFKDTPFTIPDSYKTVVQMHNTIIFGDGVPDYIDFYGYDGDAPSSEFMMEELEGDEERHQGFCDAGQNWIIWDHQHKNALGEPVIIIADHGLTVEDNEAFPEQDKIAFGTGGLFIRLMSQFILDEDKYGWG
>NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein
MKVMNVIKGVITLVILFSFSSIHAQRIYVSKTGNDANPGTVSQPFKTIAKASAIANPGNTIVIGEGTYEETIKPLRSGTPGNPIVYTSKQGEKVIISAMEALSGWTSDGGSVWKTTVNWDLEQRNFVIRGATVLDLARWPNNTDGDRFTLNSLRNDGGSQDEVSINAFLTDRDIPNWQWSNGGSIMFYGDRPGSGWTTWRAWIKSQSSGRVTFDAVKNQNWIIGSHPPGDFGDYYLEGIKEALDYQNEWYFDASANSLFVQLPGGVKPKDGEVQMARRAVTANLENRDYIHIENLALFGGNVLIKGTGNKLKGVKVLYGSMTRGITPNFNSGINAVDVKGGSVNTIIENSEIGFGDATGIWDSGNATIIRNNYIHDFDFLGSYDAPIMARGGKNSKILRNNISRGGRDGIQIVNKNSEVAWNDISRSNLIADDCALLYTINKGLNMDIHHNWFHDAEGRGELKKAAGIYLDNDAENVRIYRNVVWNVEWTNIQINWNGKDIDIFNNTLVKADGGTMGAWHKAGTAFTNVKVWNNITDTYRTDQGGNQETEGTWEPQSNKQNNLVDQTSFVNFNANNYRLNNGTVAVDAGRVISGYTDSFIGVAPDVGAYEVGDNWIPGPNWDINQGPTGVCYDLPGENCTTTGGEDSVRPDANLANGVYYIQNTTNEMKINSPNGRRVNIAATSENSAKWQITKAGTYYTIKNLRNNEFLEVPYAACNINEKAENLNVNLGTWTSVGGNHQKWGITKVNEDYFLEPLHCEKVVDRNNGNTMHLWPYVAGNTNQNWKIIRVEDACSANMVISNLERTDATNTTITVTFDTFDGVNTYEVRAWPKGQFTGYVNTPTAAAFKAGNFSPITIDGLTAGTEYTVVIRAICATGGTSELTQIDTFTSGPCAVDAEMTSVKKVSETDQSISIGFNQFTGSNTYELRAWPKGQFTGNINSPSATSYASGTSSPITINGLAAGTEYTLVLRAICSQGGASKLMAIDSATSGAVSRNDTTIKTQEDTIVLYPTPLKEGVLTIFLGHATTSKVSILDLQGNTVYRTETNEQHLKIDRSLFGNSGFYFVRIEQQGVFTTKKIIVN
>NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein
MELTTKKMVEYSFLKEMYEDQYFPNNLVDKGKDILIKLCNKIETEKPKTLKKLYALTHKATDEFNDLQEEFYENDSEIETVARECIAMDFEFISKSYGFEADTEELIATRDW
>NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein
MELPKFKYSPNAYELDLFDKIDGICSICEEKRSLKYNSSFYSVNKPDYICPWCIVNGKAAEKYDGEFNSYCAIEGVSPDPNDPKPTIPIEQLTEICSKTPSYSSWQQEIWLSHCNEPSAFIGYATSEMITPVLNEVKEDIEKLELPLELFTEGFTRESSDLGAYLFQCQKCKKHRLHIDFT
>NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein
MNKEHINKVKVLLTEWNPLGKQSVQITDLNNYDTEATDILRHIKKTNTVERINKIINTVMSEAFRIHLDPFKSKNIAEQIHSILNEK
>NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein
MELNLAYYRRKDWKKFLKMIDDKDSMHDSWNDWHKSFLKTKHSLISKGFIVNDFIVDLDKLKIYCSNRNLKIDGKARSQFVTNIK
>NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein
MKIPKIKGIIDRRILINYQIDKEVLENYLPKPFKPKLVNGKGIAGICLIRLKEIRPKGLPKQIGISSENGAHRIAVEWTENGKQKEGVYIPRRDTSSKLNSLAGGTIFPGIHHLANFRVNEKDGNYEVGFISDDKTSLSIKAKETNSWNTESVFENLECISEFFENGSIGYSPDKNDFDGLQLKAYNWKVSLLEVENVKSSFFENESIFPKGSVKFDNALLMKDIEHEWIGLKKIKTAPNTL
>NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein
MSIFDKFFKNKNDTKCPRCLGKGNVDLNDIERLNKQLFWGPGKCAYCNGKGKVSSEMLSAISEDEVYLTTDLPKKEREVFLKNNPTSKIVAKEYAQNLELFVDEIYKLHSENKLTEKQIAEYIDSEKLDYIIKGDTIDYVKKVIKIKKSEI
>NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ
MITNISLSAQNKKILFVLSAADTLELNKGQKLRQTGVFLNEFYLAYKSVSENGYTVAFATPNGVVATIDEESINDKYWKELLEIKNEAIEFITKDKSFNNPITLENAIVNQDDYIGIIIPGGQGLMIDLIENKNIPVLLKYFAKENKPTGLICHAPSLILTIPAEENPYIGYKVNSVSPIEEFVIEKFIMKGKPKNRKIARQLRKLGLKYRSGLPKSNFAIKDRNLVTSQNPFSGNSFNILYLEALTEYLEIKKIK
>NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein
MIGKIMSFTILSILFSCTESENLNTQKNNSMAQEKTSFINPKGLFNPKSNGFSHIVKVPKGKEMYYFSGQWASNIEGKLVSENFEEQVKQTVSNVKTALESAGLSLDDVVKQTVYIVDFTLEKKQILIDVASKEWRVKNFPTSTIVPLPLLATAPNCLIEIEIIAAK

Crispr_ID: NZ_CP025117_6

• CRISPR_ID: NZ_CP025117_6
• CRISPR_location: 1006341-1006439
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP025117_6

Consensus_repeat	Method
CCAACCTGTAATAGCTTGATTAAA	CRISPRCasFinder

spacers of NZ_CP025117_6

>6.1|1006365|51|NZ_CP025117|CRISPRCasFinder
GACTGTGTTTCTATAAAACATATAAGACATGTCCTCAACATTACTCACATT

CRISPR arrays and Neighbor proteins around NZ_CP025117_6

CRISPR arrays

The CRISPR arrays of NZ_CP025117_6

>merge|NZ_CP025117|6|1006341-1006439|CRISPRCasFinder
CCAATCGTTTAGAGGTTGGTTAAAGACTGTGTTTCTATAAAACATATAAGACATGTCCTCAACATTACTCACATTCCAAATTTCTATAGGTTGATTAAA

>NZ_CP025117|6|3|1006341-1006439|CRISPRCasFinder
CCAATCGTTTAGAGGTTGGTTAAA	GACTGTGTTTCTATAAAACATATAAGACATGTCCTCAACATTACTCACATT
CCAAATTTCTATAGGTTGATTAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	unknown	unknown	gnl|CDD|100004
NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	unknown	unknown	gnl|CDD|223431
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|371704
NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	unknown	unknown	gnl|CDD|367610
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	unknown	unknown	gnl|CDD|153235
NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	unknown	unknown	gnl|CDD|378271
NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	9.72812e-20
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	gnl|CDD|367610	pfam03691, UPF0167, Uncharacterized protein family (UPF0167). The proteins in this family are about 200 amino acids long and each contain 3 CXXC motifs.	1.46144e-53
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	gnl|CDD|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	6.58072e-40
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.91749e-09
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	gnl|CDD|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.34081e-25
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	0.00234315
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	8.04922e-51
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	gnl|CDD|378271	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071). This conserved protein (similar to YgjF), found in various prokaryotes, has no known function.	0.000313985

Protein sequences

>NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MNITKKTITLAIIIGFTYCLKAQQTPTFSEYNYNPFIINPAYAGLTENTEFTLSNTGFFNQFEGSPKSFSFSGHGSLNRNKIGIGAGITRDQIGVTTSTSFFAAYSYKIFFDFKSNRPYWQLYDAGVLSFGITAGLQQYQSNLTELGILDDPKFSQDINATIPTIGFSFLFNHASFYVGFSTPNVMGDSLASDSNLVLNSPYYGYFGYRIYNNRFEDFMIKPNILLKHEDGAPLQADFNVSLSFKNKLEIGTGYRTSNSINFLAGVYLFNNLRAIYTYNLASKNTTFGNTHGIILSLQLGDGYSKN
>NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein
MRIAISQDDDQLKKELTEKFSDYKTEYSDADIGGGADLWITIIVIVGTIFSQGKNINENLEAWKEIGNKILSLFSKKNKPRFIDKEASIALAISRICQKTKVNDIELINSQAIIGKETNTKGFKLNFAPLDYYILTFKVNGIENFVFCIKSNGEIRFQDYFEHSEWNYEFDWNSYDDREDYTS
>NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein
MKNSLILLFLLISIQSFAQYYEGQNFCDELIDKSFFPIDIKEKKILWTNTYYAETKNGTKEINGKTYVEFLQKWKGNNTDKLYLREENGVIYQYEQCCEQETIRFDETFEKDHSWKTADALGEYKILTFIGKLKTPFCEYENLMIIEAKLESGNFNFYYQRGHGYIGATVENKLISCETPTFDLD
>NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein
MKTGLNVTNFTGGDADRNNLFSFHVGGFAEFELNETISIQPELLYSRQGSEAGNAIKVKVDYLVIPILAKYYLSEKFSIDAGPQFSFLVNDKAEFNDSSIPDADTDASSFDFGLNVGFGYAITTNLLAQVRYNYGITTVAENPDIKNSVFQVSLGYKL
>NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein
MNTNNFAPHYTRLQTSKKGHYNLFLFNTGMPFLRKTNTMTKTIVLLLLITYACKEHKREQVKAFYTDTEKLNLKGRIKSRTGYVVKDSVKTISFNDNFNEIGFLIERHIYNFYGNVWINETYDYKNNTLQKISTHFPNDSILKIRHYLYKGNTTEIHQFENTIPTISEIEKIDDNKNKIYSALITEKDTLSTFFKYDDANNLISEKVYSNNQKLVQDINHTFNSDNLETKTEQNYSNYYGENTNYTISYLYDSAHNKTGVKTYKNGVLDTEEKRNYYNKNSAEHLFFNKSRPTKVIRYTYDNKGNIIRESHKDLATNQIDTTVYLIEYYD
>NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein
MSNGFTAHNNTINIQNLTNGSYMLKLDNKHTFKFIKK
>NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein
MKNTIILLYCMTISSCKVQSQTTINTITDAFATVKTNVDTTKQGTSVHIDTTVLSNCNYTITQFKYSSSGKIINFKLTDSSAIQWSTIVTEDIGLPPTLLKYTVSKIDNTIVFKKDNLVLQNTDPEYASITNTFIVDALALKAHQRQNTKQLKNGKLITIDLGQTVALDNKTALTLTEFVTKRVYKEQPSYARADLQLVTDNTTTAFRFIKRFLQDIAYPQDTVIPEYLTGYTFRLITFKFNESVTILVSKYHID
>NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein
MKHLLSCMLILNLAIGYSQTELNTITYSKQELSFLLDSIGQLDSNRWTKKMSNLVDSTLNKQTKLHHTLNALDFETLKTVVQNGSIEIALAKQIFNETVFDSNTINNDRLPITYYSFDKNEKDYNEFAIIMGDSFLWYTTVYFFKSNMIIAKHRIFHRYGLEIKHFKNKYDDTIFYYTVNYQSGSGIWWNQFNFYSYNKDDIRPVLTEIKNSNLQAPWGSRSYNIEATITNTNPLVFQFKYENQLTDTTNNTVAFNNDVTKVTYQYNMTDKKYVPNFTNTTLNRPKLLSYFITDNDLLFVNSNYQLFRKQLNNKNKLKQDAALNFLNALKNRLNAY
>NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein
MHTIKISIKVNGTDAPAKETILNKSSNTAFLEAPDTQSILSTLITTVTTVKKEQKVFEFNYTITHLDADQNIINTIDCYDFFDEVIKHDGLTSQIIAYTKATDHGEYDSRIWLDDETPAGTCAILALVTNDVKWIPEYIAFLRTCDLDHEVDQSGDISNIVEQYGWCETTLSLAISRLFSCHGQHGTEDIEQMLDNGLSDFVQENNQLFAQKLKEEIHYTSKSLSVVNQSKQNYIDAIFKDDLALFLDYLQDKTITSITNDLTCIWETINDK
>NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein
MAIVPNYATFILPFHNNTNSSVDTNLKGVPNTNADGYKIITDTITERNHMTNSALNRILL
>NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein
MTPKELSLLQESELKTAFITYFKPWALTVPCLEILKTIATKIVAIHYDKALKITFENEDEDEVNITFGAPYQGDFKDTPFTIPDSYKTVVQMHNTIIFGDGVPDYIDFYGYDGDAPSSEFMMEELEGDEERHQGFCDAGQNWIIWDHQHKNALGEPVIIIADHGLTVEDNEAFPEQDKIAFGTGGLFIRLMSQFILDEDKYGWG
>NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein
MKVMNVIKGVITLVILFSFSSIHAQRIYVSKTGNDANPGTVSQPFKTIAKASAIANPGNTIVIGEGTYEETIKPLRSGTPGNPIVYTSKQGEKVIISAMEALSGWTSDGGSVWKTTVNWDLEQRNFVIRGATVLDLARWPNNTDGDRFTLNSLRNDGGSQDEVSINAFLTDRDIPNWQWSNGGSIMFYGDRPGSGWTTWRAWIKSQSSGRVTFDAVKNQNWIIGSHPPGDFGDYYLEGIKEALDYQNEWYFDASANSLFVQLPGGVKPKDGEVQMARRAVTANLENRDYIHIENLALFGGNVLIKGTGNKLKGVKVLYGSMTRGITPNFNSGINAVDVKGGSVNTIIENSEIGFGDATGIWDSGNATIIRNNYIHDFDFLGSYDAPIMARGGKNSKILRNNISRGGRDGIQIVNKNSEVAWNDISRSNLIADDCALLYTINKGLNMDIHHNWFHDAEGRGELKKAAGIYLDNDAENVRIYRNVVWNVEWTNIQINWNGKDIDIFNNTLVKADGGTMGAWHKAGTAFTNVKVWNNITDTYRTDQGGNQETEGTWEPQSNKQNNLVDQTSFVNFNANNYRLNNGTVAVDAGRVISGYTDSFIGVAPDVGAYEVGDNWIPGPNWDINQGPTGVCYDLPGENCTTTGGEDSVRPDANLANGVYYIQNTTNEMKINSPNGRRVNIAATSENSAKWQITKAGTYYTIKNLRNNEFLEVPYAACNINEKAENLNVNLGTWTSVGGNHQKWGITKVNEDYFLEPLHCEKVVDRNNGNTMHLWPYVAGNTNQNWKIIRVEDACSANMVISNLERTDATNTTITVTFDTFDGVNTYEVRAWPKGQFTGYVNTPTAAAFKAGNFSPITIDGLTAGTEYTVVIRAICATGGTSELTQIDTFTSGPCAVDAEMTSVKKVSETDQSISIGFNQFTGSNTYELRAWPKGQFTGNINSPSATSYASGTSSPITINGLAAGTEYTLVLRAICSQGGASKLMAIDSATSGAVSRNDTTIKTQEDTIVLYPTPLKEGVLTIFLGHATTSKVSILDLQGNTVYRTETNEQHLKIDRSLFGNSGFYFVRIEQQGVFTTKKIIVN
>NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein
MELTTKKMVEYSFLKEMYEDQYFPNNLVDKGKDILIKLCNKIETEKPKTLKKLYALTHKATDEFNDLQEEFYENDSEIETVARECIAMDFEFISKSYGFEADTEELIATRDW
>NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein
MELPKFKYSPNAYELDLFDKIDGICSICEEKRSLKYNSSFYSVNKPDYICPWCIVNGKAAEKYDGEFNSYCAIEGVSPDPNDPKPTIPIEQLTEICSKTPSYSSWQQEIWLSHCNEPSAFIGYATSEMITPVLNEVKEDIEKLELPLELFTEGFTRESSDLGAYLFQCQKCKKHRLHIDFT
>NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein
MNKEHINKVKVLLTEWNPLGKQSVQITDLNNYDTEATDILRHIKKTNTVERINKIINTVMSEAFRIHLDPFKSKNIAEQIHSILNEK
>NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein
MELNLAYYRRKDWKKFLKMIDDKDSMHDSWNDWHKSFLKTKHSLISKGFIVNDFIVDLDKLKIYCSNRNLKIDGKARSQFVTNIK
>NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein
MKIPKIKGIIDRRILINYQIDKEVLENYLPKPFKPKLVNGKGIAGICLIRLKEIRPKGLPKQIGISSENGAHRIAVEWTENGKQKEGVYIPRRDTSSKLNSLAGGTIFPGIHHLANFRVNEKDGNYEVGFISDDKTSLSIKAKETNSWNTESVFENLECISEFFENGSIGYSPDKNDFDGLQLKAYNWKVSLLEVENVKSSFFENESIFPKGSVKFDNALLMKDIEHEWIGLKKIKTAPNTL
>NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein
MSIFDKFFKNKNDTKCPRCLGKGNVDLNDIERLNKQLFWGPGKCAYCNGKGKVSSEMLSAISEDEVYLTTDLPKKEREVFLKNNPTSKIVAKEYAQNLELFVDEIYKLHSENKLTEKQIAEYIDSEKLDYIIKGDTIDYVKKVIKIKKSEI
>NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ
MITNISLSAQNKKILFVLSAADTLELNKGQKLRQTGVFLNEFYLAYKSVSENGYTVAFATPNGVVATIDEESINDKYWKELLEIKNEAIEFITKDKSFNNPITLENAIVNQDDYIGIIIPGGQGLMIDLIENKNIPVLLKYFAKENKPTGLICHAPSLILTIPAEENPYIGYKVNSVSPIEEFVIEKFIMKGKPKNRKIARQLRKLGLKYRSGLPKSNFAIKDRNLVTSQNPFSGNSFNILYLEALTEYLEIKKIK
>NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein
MIGKIMSFTILSILFSCTESENLNTQKNNSMAQEKTSFINPKGLFNPKSNGFSHIVKVPKGKEMYYFSGQWASNIEGKLVSENFEEQVKQTVSNVKTALESAGLSLDDVVKQTVYIVDFTLEKKQILIDVASKEWRVKNFPTSTIVPLPLLATAPNCLIEIEIIAAK

Crispr_ID: NZ_CP025117_4

• CRISPR_ID: NZ_CP025117_4
• CRISPR_location: 1005723-1005831
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP025117_4

Consensus_repeat	Method
CCAACCTGTAATAGCTTGATTAAA	CRISPRCasFinder

spacers of NZ_CP025117_4

>4.1|1005747|60|NZ_CP025117|CRISPRCasFinder
AACTGTAACAACGTTATAAGTATAAAACATGTATGACATGTTGGTTACAGCTGAAGTCTG

CRISPR arrays and Neighbor proteins around NZ_CP025117_4

CRISPR arrays

The CRISPR arrays of NZ_CP025117_4

>merge|NZ_CP025117|4|1005723-1005831|CRISPRCasFinder
CCAGCTGTTTAGAGGTTGATTAAAAACTGTAACAACGTTATAAGTATAAAACATGTATGACATGTTGGTTACAGCTGAAGTCTGCCAGCCATTTAATGGTTGATTAAAT

>NZ_CP025117|4|1|1005723-1005831|CRISPRCasFinder
CCAGCTGTTTAGAGGTTGATTAAA	AACTGTAACAACGTTATAAGTATAAAACATGTATGACATGTTGGTTACAGCTGAAGTCTG
CCAGCCATTTAATGGTTGATTAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	unknown	unknown	gnl|CDD|100004
NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	unknown	unknown	gnl|CDD|223431
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|371704
NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	unknown	unknown	gnl|CDD|367610
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	unknown	unknown	gnl|CDD|153235
NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	unknown	unknown	gnl|CDD|378271
NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	9.72812e-20
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	gnl|CDD|367610	pfam03691, UPF0167, Uncharacterized protein family (UPF0167). The proteins in this family are about 200 amino acids long and each contain 3 CXXC motifs.	1.46144e-53
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	gnl|CDD|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	6.58072e-40
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.91749e-09
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	gnl|CDD|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.34081e-25
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	0.00234315
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	8.04922e-51
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	gnl|CDD|378271	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071). This conserved protein (similar to YgjF), found in various prokaryotes, has no known function.	0.000313985

Protein sequences

>NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MNITKKTITLAIIIGFTYCLKAQQTPTFSEYNYNPFIINPAYAGLTENTEFTLSNTGFFNQFEGSPKSFSFSGHGSLNRNKIGIGAGITRDQIGVTTSTSFFAAYSYKIFFDFKSNRPYWQLYDAGVLSFGITAGLQQYQSNLTELGILDDPKFSQDINATIPTIGFSFLFNHASFYVGFSTPNVMGDSLASDSNLVLNSPYYGYFGYRIYNNRFEDFMIKPNILLKHEDGAPLQADFNVSLSFKNKLEIGTGYRTSNSINFLAGVYLFNNLRAIYTYNLASKNTTFGNTHGIILSLQLGDGYSKN
>NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein
MRIAISQDDDQLKKELTEKFSDYKTEYSDADIGGGADLWITIIVIVGTIFSQGKNINENLEAWKEIGNKILSLFSKKNKPRFIDKEASIALAISRICQKTKVNDIELINSQAIIGKETNTKGFKLNFAPLDYYILTFKVNGIENFVFCIKSNGEIRFQDYFEHSEWNYEFDWNSYDDREDYTS
>NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein
MKNSLILLFLLISIQSFAQYYEGQNFCDELIDKSFFPIDIKEKKILWTNTYYAETKNGTKEINGKTYVEFLQKWKGNNTDKLYLREENGVIYQYEQCCEQETIRFDETFEKDHSWKTADALGEYKILTFIGKLKTPFCEYENLMIIEAKLESGNFNFYYQRGHGYIGATVENKLISCETPTFDLD
>NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein
MKTGLNVTNFTGGDADRNNLFSFHVGGFAEFELNETISIQPELLYSRQGSEAGNAIKVKVDYLVIPILAKYYLSEKFSIDAGPQFSFLVNDKAEFNDSSIPDADTDASSFDFGLNVGFGYAITTNLLAQVRYNYGITTVAENPDIKNSVFQVSLGYKL
>NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein
MNTNNFAPHYTRLQTSKKGHYNLFLFNTGMPFLRKTNTMTKTIVLLLLITYACKEHKREQVKAFYTDTEKLNLKGRIKSRTGYVVKDSVKTISFNDNFNEIGFLIERHIYNFYGNVWINETYDYKNNTLQKISTHFPNDSILKIRHYLYKGNTTEIHQFENTIPTISEIEKIDDNKNKIYSALITEKDTLSTFFKYDDANNLISEKVYSNNQKLVQDINHTFNSDNLETKTEQNYSNYYGENTNYTISYLYDSAHNKTGVKTYKNGVLDTEEKRNYYNKNSAEHLFFNKSRPTKVIRYTYDNKGNIIRESHKDLATNQIDTTVYLIEYYD
>NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein
MSNGFTAHNNTINIQNLTNGSYMLKLDNKHTFKFIKK
>NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein
MKNTIILLYCMTISSCKVQSQTTINTITDAFATVKTNVDTTKQGTSVHIDTTVLSNCNYTITQFKYSSSGKIINFKLTDSSAIQWSTIVTEDIGLPPTLLKYTVSKIDNTIVFKKDNLVLQNTDPEYASITNTFIVDALALKAHQRQNTKQLKNGKLITIDLGQTVALDNKTALTLTEFVTKRVYKEQPSYARADLQLVTDNTTTAFRFIKRFLQDIAYPQDTVIPEYLTGYTFRLITFKFNESVTILVSKYHID
>NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein
MKHLLSCMLILNLAIGYSQTELNTITYSKQELSFLLDSIGQLDSNRWTKKMSNLVDSTLNKQTKLHHTLNALDFETLKTVVQNGSIEIALAKQIFNETVFDSNTINNDRLPITYYSFDKNEKDYNEFAIIMGDSFLWYTTVYFFKSNMIIAKHRIFHRYGLEIKHFKNKYDDTIFYYTVNYQSGSGIWWNQFNFYSYNKDDIRPVLTEIKNSNLQAPWGSRSYNIEATITNTNPLVFQFKYENQLTDTTNNTVAFNNDVTKVTYQYNMTDKKYVPNFTNTTLNRPKLLSYFITDNDLLFVNSNYQLFRKQLNNKNKLKQDAALNFLNALKNRLNAY
>NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein
MHTIKISIKVNGTDAPAKETILNKSSNTAFLEAPDTQSILSTLITTVTTVKKEQKVFEFNYTITHLDADQNIINTIDCYDFFDEVIKHDGLTSQIIAYTKATDHGEYDSRIWLDDETPAGTCAILALVTNDVKWIPEYIAFLRTCDLDHEVDQSGDISNIVEQYGWCETTLSLAISRLFSCHGQHGTEDIEQMLDNGLSDFVQENNQLFAQKLKEEIHYTSKSLSVVNQSKQNYIDAIFKDDLALFLDYLQDKTITSITNDLTCIWETINDK
>NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein
MAIVPNYATFILPFHNNTNSSVDTNLKGVPNTNADGYKIITDTITERNHMTNSALNRILL
>NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein
MTPKELSLLQESELKTAFITYFKPWALTVPCLEILKTIATKIVAIHYDKALKITFENEDEDEVNITFGAPYQGDFKDTPFTIPDSYKTVVQMHNTIIFGDGVPDYIDFYGYDGDAPSSEFMMEELEGDEERHQGFCDAGQNWIIWDHQHKNALGEPVIIIADHGLTVEDNEAFPEQDKIAFGTGGLFIRLMSQFILDEDKYGWG
>NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein
MKVMNVIKGVITLVILFSFSSIHAQRIYVSKTGNDANPGTVSQPFKTIAKASAIANPGNTIVIGEGTYEETIKPLRSGTPGNPIVYTSKQGEKVIISAMEALSGWTSDGGSVWKTTVNWDLEQRNFVIRGATVLDLARWPNNTDGDRFTLNSLRNDGGSQDEVSINAFLTDRDIPNWQWSNGGSIMFYGDRPGSGWTTWRAWIKSQSSGRVTFDAVKNQNWIIGSHPPGDFGDYYLEGIKEALDYQNEWYFDASANSLFVQLPGGVKPKDGEVQMARRAVTANLENRDYIHIENLALFGGNVLIKGTGNKLKGVKVLYGSMTRGITPNFNSGINAVDVKGGSVNTIIENSEIGFGDATGIWDSGNATIIRNNYIHDFDFLGSYDAPIMARGGKNSKILRNNISRGGRDGIQIVNKNSEVAWNDISRSNLIADDCALLYTINKGLNMDIHHNWFHDAEGRGELKKAAGIYLDNDAENVRIYRNVVWNVEWTNIQINWNGKDIDIFNNTLVKADGGTMGAWHKAGTAFTNVKVWNNITDTYRTDQGGNQETEGTWEPQSNKQNNLVDQTSFVNFNANNYRLNNGTVAVDAGRVISGYTDSFIGVAPDVGAYEVGDNWIPGPNWDINQGPTGVCYDLPGENCTTTGGEDSVRPDANLANGVYYIQNTTNEMKINSPNGRRVNIAATSENSAKWQITKAGTYYTIKNLRNNEFLEVPYAACNINEKAENLNVNLGTWTSVGGNHQKWGITKVNEDYFLEPLHCEKVVDRNNGNTMHLWPYVAGNTNQNWKIIRVEDACSANMVISNLERTDATNTTITVTFDTFDGVNTYEVRAWPKGQFTGYVNTPTAAAFKAGNFSPITIDGLTAGTEYTVVIRAICATGGTSELTQIDTFTSGPCAVDAEMTSVKKVSETDQSISIGFNQFTGSNTYELRAWPKGQFTGNINSPSATSYASGTSSPITINGLAAGTEYTLVLRAICSQGGASKLMAIDSATSGAVSRNDTTIKTQEDTIVLYPTPLKEGVLTIFLGHATTSKVSILDLQGNTVYRTETNEQHLKIDRSLFGNSGFYFVRIEQQGVFTTKKIIVN
>NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein
MELTTKKMVEYSFLKEMYEDQYFPNNLVDKGKDILIKLCNKIETEKPKTLKKLYALTHKATDEFNDLQEEFYENDSEIETVARECIAMDFEFISKSYGFEADTEELIATRDW
>NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein
MELPKFKYSPNAYELDLFDKIDGICSICEEKRSLKYNSSFYSVNKPDYICPWCIVNGKAAEKYDGEFNSYCAIEGVSPDPNDPKPTIPIEQLTEICSKTPSYSSWQQEIWLSHCNEPSAFIGYATSEMITPVLNEVKEDIEKLELPLELFTEGFTRESSDLGAYLFQCQKCKKHRLHIDFT
>NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein
MNKEHINKVKVLLTEWNPLGKQSVQITDLNNYDTEATDILRHIKKTNTVERINKIINTVMSEAFRIHLDPFKSKNIAEQIHSILNEK
>NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein
MELNLAYYRRKDWKKFLKMIDDKDSMHDSWNDWHKSFLKTKHSLISKGFIVNDFIVDLDKLKIYCSNRNLKIDGKARSQFVTNIK
>NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein
MKIPKIKGIIDRRILINYQIDKEVLENYLPKPFKPKLVNGKGIAGICLIRLKEIRPKGLPKQIGISSENGAHRIAVEWTENGKQKEGVYIPRRDTSSKLNSLAGGTIFPGIHHLANFRVNEKDGNYEVGFISDDKTSLSIKAKETNSWNTESVFENLECISEFFENGSIGYSPDKNDFDGLQLKAYNWKVSLLEVENVKSSFFENESIFPKGSVKFDNALLMKDIEHEWIGLKKIKTAPNTL
>NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein
MSIFDKFFKNKNDTKCPRCLGKGNVDLNDIERLNKQLFWGPGKCAYCNGKGKVSSEMLSAISEDEVYLTTDLPKKEREVFLKNNPTSKIVAKEYAQNLELFVDEIYKLHSENKLTEKQIAEYIDSEKLDYIIKGDTIDYVKKVIKIKKSEI
>NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ
MITNISLSAQNKKILFVLSAADTLELNKGQKLRQTGVFLNEFYLAYKSVSENGYTVAFATPNGVVATIDEESINDKYWKELLEIKNEAIEFITKDKSFNNPITLENAIVNQDDYIGIIIPGGQGLMIDLIENKNIPVLLKYFAKENKPTGLICHAPSLILTIPAEENPYIGYKVNSVSPIEEFVIEKFIMKGKPKNRKIARQLRKLGLKYRSGLPKSNFAIKDRNLVTSQNPFSGNSFNILYLEALTEYLEIKKIK
>NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein
MIGKIMSFTILSILFSCTESENLNTQKNNSMAQEKTSFINPKGLFNPKSNGFSHIVKVPKGKEMYYFSGQWASNIEGKLVSENFEEQVKQTVSNVKTALESAGLSLDDVVKQTVYIVDFTLEKKQILIDVASKEWRVKNFPTSTIVPLPLLATAPNCLIEIEIIAAK

Crispr_ID: NZ_CP025117_5

• CRISPR_ID: NZ_CP025117_5
• CRISPR_location: 1005957-1006206
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP025117_5

Consensus_repeat	Method
CCAACCTGTAATAGCTTGATTAAA	CRISPRCasFinder

spacers of NZ_CP025117_5

>5.1|1005981|51|NZ_CP025117|CRISPRCasFinder
AGCATTAGCATATTGAAACATCGCACTCATATTAGTGACATTGCTAACAAT
>5.2|1006056|51|NZ_CP025117|CRISPRCasFinder
TACATAAGCACTTTCAAACATAGAAGACATTTTAGTAACATTACTAACATC
>5.3|1006131|51|NZ_CP025117|CRISPRCasFinder
ACGAGAGGCGCTTTCAAACATTGATTCCATATTTGTAACCGCAGTAACAAT

CRISPR arrays and Neighbor proteins around NZ_CP025117_5

CRISPR arrays

The CRISPR arrays of NZ_CP025117_5

>merge|NZ_CP025117|5|1005957-1006206|CRISPRCasFinder
CCAACCTGTAATAGCTTGATTAAAAGCATTAGCATATTGAAACATCGCACTCATATTAGTGACATTGCTAACAATCCAACCTGTAATATCTTGATTAAATACATAAGCACTTTCAAACATAGAAGACATTTTAGTAACATTACTAACATCCCAAACCGTAATGTCCTCATTAAAACGAGAGGCGCTTTCAAACATTGATTCCATATTTGTAACCGCAGTAACAATCCAACTATTTAAGGGTTGATTAAAA

>NZ_CP025117|5|2|1005957-1006206|CRISPRCasFinder
CCAACCTGTAATAGCTTGATTAAA	AGCATTAGCATATTGAAACATCGCACTCATATTAGTGACATTGCTAACAAT
CCAACCTGTAATATCTTGATTAAA	TACATAAGCACTTTCAAACATAGAAGACATTTTAGTAACATTACTAACATC
CCAAACCGTAATGTCCTCATTAAA	ACGAGAGGCGCTTTCAAACATTGATTCCATATTTGTAACCGCAGTAACAAT
CCAACTATTTAAGGGTTGATTAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	unknown	unknown	gnl|CDD|100004
NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	unknown	unknown	gnl|CDD|223431
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|371704
NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	unknown	unknown	gnl|CDD|367610
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	unknown	unknown	gnl|CDD|153235
NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	unknown	unknown	gnl|CDD|378271
NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	9.72812e-20
NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein	gnl|CDD|367610	pfam03691, UPF0167, Uncharacterized protein family (UPF0167). The proteins in this family are about 200 amino acids long and each contain 3 CXXC motifs.	1.46144e-53
NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ	gnl|CDD|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	6.58072e-40
NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.91749e-09
NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein	gnl|CDD|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.34081e-25
NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein	gnl|CDD|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	0.00234315
NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	8.04922e-51
NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein	gnl|CDD|378271	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071). This conserved protein (similar to YgjF), found in various prokaryotes, has no known function.	0.000313985

Protein sequences

>NZ_CP025117.1|WP_101016206.1|997052_997973_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MNITKKTITLAIIIGFTYCLKAQQTPTFSEYNYNPFIINPAYAGLTENTEFTLSNTGFFNQFEGSPKSFSFSGHGSLNRNKIGIGAGITRDQIGVTTSTSFFAAYSYKIFFDFKSNRPYWQLYDAGVLSFGITAGLQQYQSNLTELGILDDPKFSQDINATIPTIGFSFLFNHASFYVGFSTPNVMGDSLASDSNLVLNSPYYGYFGYRIYNNRFEDFMIKPNILLKHEDGAPLQADFNVSLSFKNKLEIGTGYRTSNSINFLAGVYLFNNLRAIYTYNLASKNTTFGNTHGIILSLQLGDGYSKN
>NZ_CP025117.1|WP_101016204.1|996148_996700_-|hypothetical-protein
MRIAISQDDDQLKKELTEKFSDYKTEYSDADIGGGADLWITIIVIVGTIFSQGKNINENLEAWKEIGNKILSLFSKKNKPRFIDKEASIALAISRICQKTKVNDIELINSQAIIGKETNTKGFKLNFAPLDYYILTFKVNGIENFVFCIKSNGEIRFQDYFEHSEWNYEFDWNSYDDREDYTS
>NZ_CP025117.1|WP_101016202.1|995454_996012_-|hypothetical-protein
MKNSLILLFLLISIQSFAQYYEGQNFCDELIDKSFFPIDIKEKKILWTNTYYAETKNGTKEINGKTYVEFLQKWKGNNTDKLYLREENGVIYQYEQCCEQETIRFDETFEKDHSWKTADALGEYKILTFIGKLKTPFCEYENLMIIEAKLESGNFNFYYQRGHGYIGATVENKLISCETPTFDLD
>NZ_CP025117.1|WP_101016200.1|994420_994897_-|PorT-family-protein
MKTGLNVTNFTGGDADRNNLFSFHVGGFAEFELNETISIQPELLYSRQGSEAGNAIKVKVDYLVIPILAKYYLSEKFSIDAGPQFSFLVNDKAEFNDSSIPDADTDASSFDFGLNVGFGYAITTNLLAQVRYNYGITTVAENPDIKNSVFQVSLGYKL
>NZ_CP025117.1|WP_101016198.1|993002_993995_-|hypothetical-protein
MNTNNFAPHYTRLQTSKKGHYNLFLFNTGMPFLRKTNTMTKTIVLLLLITYACKEHKREQVKAFYTDTEKLNLKGRIKSRTGYVVKDSVKTISFNDNFNEIGFLIERHIYNFYGNVWINETYDYKNNTLQKISTHFPNDSILKIRHYLYKGNTTEIHQFENTIPTISEIEKIDDNKNKIYSALITEKDTLSTFFKYDDANNLISEKVYSNNQKLVQDINHTFNSDNLETKTEQNYSNYYGENTNYTISYLYDSAHNKTGVKTYKNGVLDTEEKRNYYNKNSAEHLFFNKSRPTKVIRYTYDNKGNIIRESHKDLATNQIDTTVYLIEYYD
>NZ_CP025117.1|WP_157814086.1|992764_992878_-|hypothetical-protein
MSNGFTAHNNTINIQNLTNGSYMLKLDNKHTFKFIKK
>NZ_CP025117.1|WP_157814085.1|991745_992513_-|hypothetical-protein
MKNTIILLYCMTISSCKVQSQTTINTITDAFATVKTNVDTTKQGTSVHIDTTVLSNCNYTITQFKYSSSGKIINFKLTDSSAIQWSTIVTEDIGLPPTLLKYTVSKIDNTIVFKKDNLVLQNTDPEYASITNTFIVDALALKAHQRQNTKQLKNGKLITIDLGQTVALDNKTALTLTEFVTKRVYKEQPSYARADLQLVTDNTTTAFRFIKRFLQDIAYPQDTVIPEYLTGYTFRLITFKFNESVTILVSKYHID
>NZ_CP025117.1|WP_157814084.1|990713_991724_-|hypothetical-protein
MKHLLSCMLILNLAIGYSQTELNTITYSKQELSFLLDSIGQLDSNRWTKKMSNLVDSTLNKQTKLHHTLNALDFETLKTVVQNGSIEIALAKQIFNETVFDSNTINNDRLPITYYSFDKNEKDYNEFAIIMGDSFLWYTTVYFFKSNMIIAKHRIFHRYGLEIKHFKNKYDDTIFYYTVNYQSGSGIWWNQFNFYSYNKDDIRPVLTEIKNSNLQAPWGSRSYNIEATITNTNPLVFQFKYENQLTDTTNNTVAFNNDVTKVTYQYNMTDKKYVPNFTNTTLNRPKLLSYFITDNDLLFVNSNYQLFRKQLNNKNKLKQDAALNFLNALKNRLNAY
>NZ_CP025117.1|WP_101016190.1|989773_990592_-|hypothetical-protein
MHTIKISIKVNGTDAPAKETILNKSSNTAFLEAPDTQSILSTLITTVTTVKKEQKVFEFNYTITHLDADQNIINTIDCYDFFDEVIKHDGLTSQIIAYTKATDHGEYDSRIWLDDETPAGTCAILALVTNDVKWIPEYIAFLRTCDLDHEVDQSGDISNIVEQYGWCETTLSLAISRLFSCHGQHGTEDIEQMLDNGLSDFVQENNQLFAQKLKEEIHYTSKSLSVVNQSKQNYIDAIFKDDLALFLDYLQDKTITSITNDLTCIWETINDK
>NZ_CP025117.1|WP_157814083.1|989412_989595_-|hypothetical-protein
MAIVPNYATFILPFHNNTNSSVDTNLKGVPNTNADGYKIITDTITERNHMTNSALNRILL
>NZ_CP025117.1|WP_101016210.1|1007418_1008033_-|hypothetical-protein
MTPKELSLLQESELKTAFITYFKPWALTVPCLEILKTIATKIVAIHYDKALKITFENEDEDEVNITFGAPYQGDFKDTPFTIPDSYKTVVQMHNTIIFGDGVPDYIDFYGYDGDAPSSEFMMEELEGDEERHQGFCDAGQNWIIWDHQHKNALGEPVIIIADHGLTVEDNEAFPEQDKIAFGTGGLFIRLMSQFILDEDKYGWG
>NZ_CP025117.1|WP_101016212.1|1008355_1011607_+|T9SS-type-A-sorting-domain-containing-protein
MKVMNVIKGVITLVILFSFSSIHAQRIYVSKTGNDANPGTVSQPFKTIAKASAIANPGNTIVIGEGTYEETIKPLRSGTPGNPIVYTSKQGEKVIISAMEALSGWTSDGGSVWKTTVNWDLEQRNFVIRGATVLDLARWPNNTDGDRFTLNSLRNDGGSQDEVSINAFLTDRDIPNWQWSNGGSIMFYGDRPGSGWTTWRAWIKSQSSGRVTFDAVKNQNWIIGSHPPGDFGDYYLEGIKEALDYQNEWYFDASANSLFVQLPGGVKPKDGEVQMARRAVTANLENRDYIHIENLALFGGNVLIKGTGNKLKGVKVLYGSMTRGITPNFNSGINAVDVKGGSVNTIIENSEIGFGDATGIWDSGNATIIRNNYIHDFDFLGSYDAPIMARGGKNSKILRNNISRGGRDGIQIVNKNSEVAWNDISRSNLIADDCALLYTINKGLNMDIHHNWFHDAEGRGELKKAAGIYLDNDAENVRIYRNVVWNVEWTNIQINWNGKDIDIFNNTLVKADGGTMGAWHKAGTAFTNVKVWNNITDTYRTDQGGNQETEGTWEPQSNKQNNLVDQTSFVNFNANNYRLNNGTVAVDAGRVISGYTDSFIGVAPDVGAYEVGDNWIPGPNWDINQGPTGVCYDLPGENCTTTGGEDSVRPDANLANGVYYIQNTTNEMKINSPNGRRVNIAATSENSAKWQITKAGTYYTIKNLRNNEFLEVPYAACNINEKAENLNVNLGTWTSVGGNHQKWGITKVNEDYFLEPLHCEKVVDRNNGNTMHLWPYVAGNTNQNWKIIRVEDACSANMVISNLERTDATNTTITVTFDTFDGVNTYEVRAWPKGQFTGYVNTPTAAAFKAGNFSPITIDGLTAGTEYTVVIRAICATGGTSELTQIDTFTSGPCAVDAEMTSVKKVSETDQSISIGFNQFTGSNTYELRAWPKGQFTGNINSPSATSYASGTSSPITINGLAAGTEYTLVLRAICSQGGASKLMAIDSATSGAVSRNDTTIKTQEDTIVLYPTPLKEGVLTIFLGHATTSKVSILDLQGNTVYRTETNEQHLKIDRSLFGNSGFYFVRIEQQGVFTTKKIIVN
>NZ_CP025117.1|WP_101020877.1|1012629_1012968_-|hypothetical-protein
MELTTKKMVEYSFLKEMYEDQYFPNNLVDKGKDILIKLCNKIETEKPKTLKKLYALTHKATDEFNDLQEEFYENDSEIETVARECIAMDFEFISKSYGFEADTEELIATRDW
>NZ_CP025117.1|WP_101016214.1|1013005_1013551_-|CbrC-family-protein
MELPKFKYSPNAYELDLFDKIDGICSICEEKRSLKYNSSFYSVNKPDYICPWCIVNGKAAEKYDGEFNSYCAIEGVSPDPNDPKPTIPIEQLTEICSKTPSYSSWQQEIWLSHCNEPSAFIGYATSEMITPVLNEVKEDIEKLELPLELFTEGFTRESSDLGAYLFQCQKCKKHRLHIDFT
>NZ_CP025117.1|WP_101016216.1|1014037_1014301_-|DUF1871-family-protein
MNKEHINKVKVLLTEWNPLGKQSVQITDLNNYDTEATDILRHIKKTNTVERINKIINTVMSEAFRIHLDPFKSKNIAEQIHSILNEK
>NZ_CP025117.1|WP_101016218.1|1014297_1014555_-|hypothetical-protein
MELNLAYYRRKDWKKFLKMIDDKDSMHDSWNDWHKSFLKTKHSLISKGFIVNDFIVDLDKLKIYCSNRNLKIDGKARSQFVTNIK
>NZ_CP025117.1|WP_101016220.1|1014703_1015432_-|hypothetical-protein
MKIPKIKGIIDRRILINYQIDKEVLENYLPKPFKPKLVNGKGIAGICLIRLKEIRPKGLPKQIGISSENGAHRIAVEWTENGKQKEGVYIPRRDTSSKLNSLAGGTIFPGIHHLANFRVNEKDGNYEVGFISDDKTSLSIKAKETNSWNTESVFENLECISEFFENGSIGYSPDKNDFDGLQLKAYNWKVSLLEVENVKSSFFENESIFPKGSVKFDNALLMKDIEHEWIGLKKIKTAPNTL
>NZ_CP025117.1|WP_157814087.1|1015567_1016023_-|hypothetical-protein
MSIFDKFFKNKNDTKCPRCLGKGNVDLNDIERLNKQLFWGPGKCAYCNGKGKVSSEMLSAISEDEVYLTTDLPKKEREVFLKNNPTSKIVAKEYAQNLELFVDEIYKLHSENKLTEKQIAEYIDSEKLDYIIKGDTIDYVKKVIKIKKSEI
>NZ_CP025117.1|WP_101020881.1|1016421_1017192_-|thiamine-biosynthesis-protein-ThiJ
MITNISLSAQNKKILFVLSAADTLELNKGQKLRQTGVFLNEFYLAYKSVSENGYTVAFATPNGVVATIDEESINDKYWKELLEIKNEAIEFITKDKSFNNPITLENAIVNQDDYIGIIIPGGQGLMIDLIENKNIPVLLKYFAKENKPTGLICHAPSLILTIPAEENPYIGYKVNSVSPIEEFVIEKFIMKGKPKNRKIARQLRKLGLKYRSGLPKSNFAIKDRNLVTSQNPFSGNSFNILYLEALTEYLEIKKIK
>NZ_CP025117.1|WP_101016224.1|1017232_1017736_-|RidA-family-protein
MIGKIMSFTILSILFSCTESENLNTQKNNSMAQEKTSFINPKGLFNPKSNGFSHIVKVPKGKEMYYFSGQWASNIEGKLVSENFEEQVKQTVSNVKTALESAGLSLDDVVKQTVYIVDFTLEKKQILIDVASKEWRVKNFPTSTIVPLPLLATAPNCLIEIEIIAAK

Crispr_ID: NZ_CP025117_7

• CRISPR_ID: NZ_CP025117_7
• CRISPR_location: 1345122-1345237
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP025117_7

Consensus_repeat	Method
AGTTGCGTGCGTACTCTCACTTTTTTCACTTTATTCT	CRISPRCasFinder

spacers of NZ_CP025117_7

>7.1|1345159|42|NZ_CP025117|CRISPRCasFinder
TGCTAAATTTATATATGAATTAACTTCCTTTATAAACATAGG

CRISPR arrays and Neighbor proteins around NZ_CP025117_7

CRISPR arrays

The CRISPR arrays of NZ_CP025117_7

>merge|NZ_CP025117|7|1345122-1345237|CRISPRCasFinder
AGTTGCGTGCGTACTCTCACTTTTTTCACTTTATTCTTGCTAAATTTATATATGAATTAACTTCCTTTATAAACATAGGAGTTGCGTGCGTACTCTCACTTTTTTCACTTTATTCT

>NZ_CP025117|7|4|1345122-1345237|CRISPRCasFinder
AGTTGCGTGCGTACTCTCACTTTTTTCACTTTATTCT	TGCTAAATTTATATATGAATTAACTTCCTTTATAAACATAGG
AGTTGCGTGCGTACTCTCACTTTTTTCACTTTATTCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101016764.1|1339615_1339852_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020915.1|1347477_1348083_-|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl|CDD|234770
NZ_CP025117.1|WP_101016782.1|1349723_1350629_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl|CDD|234597
NZ_CP025117.1|WP_101016784.1|1350632_1350950_+|S-adenosyl-methyltransferase	unknown	unknown	unknown
NZ_CP025117.1|WP_101016776.1|1346578_1346923_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016771.1|1341860_1343309_-|MBOAT-family-protein	unknown	unknown	gnl|CDD|224610
NZ_CP025117.1|WP_101016774.1|1345385_1345916_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016778.1|1346924_1347368_-|DUF4279-domain-containing-protein	unknown	unknown	gnl|CDD|372913
NZ_CP025117.1|WP_101016754.1|1336021_1336741_-|3-ketoacyl-ACP-reductase	unknown	unknown	gnl|CDD|236074
NZ_CP025117.1|WP_101016758.1|1337414_1337840_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NZ_CP025117.1|WP_157814093.1|1340936_1341794_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016760.1|1337898_1338669_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235500
NZ_CP025117.1|WP_101016752.1|1334930_1336025_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP025117.1|WP_101016767.1|1339989_1340238_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101020918.1|1349275_1349746_+|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl|CDD|234728
NZ_CP025117.1|WP_157814092.1|1339086_1339398_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101016780.1|1348227_1348992_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP025117.1|WP_101016788.1|1352962_1354426_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl|CDD|234660
NZ_CP025117.1|WP_101016786.1|1351013_1352966_+|transpeptidase-family-protein	unknown	unknown	gnl|CDD|223839
NZ_CP025117.1|WP_101016756.1|1336930_1337155_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101016778.1|1346924_1347368_-|DUF4279-domain-containing-protein	gnl|CDD|372913	pfam14106, DUF4279, Domain of unknown function (DUF4279). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 134 and 145 amino acids in length.	1.88931e-17
NZ_CP025117.1|WP_101016771.1|1341860_1343309_-|MBOAT-family-protein	gnl|CDD|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	5.98339e-72
NZ_CP025117.1|WP_101016782.1|1349723_1350629_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl|CDD|234597	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH.	5.63517e-146
NZ_CP025117.1|WP_101016758.1|1337414_1337840_-|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.53282e-10
NZ_CP025117.1|WP_101020915.1|1347477_1348083_-|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl|CDD|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	3.64005e-96
NZ_CP025117.1|WP_101016760.1|1337898_1338669_-|SDR-family-oxidoreductase	gnl|CDD|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	5.25678e-73
NZ_CP025117.1|WP_101016752.1|1334930_1336025_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.4356e-91
NZ_CP025117.1|WP_101016788.1|1352962_1354426_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NZ_CP025117.1|WP_101020918.1|1349275_1349746_+|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl|CDD|234728	PRK00326, PRK00326, transcriptional regulator MraZ.	2.12009e-38
NZ_CP025117.1|WP_101016780.1|1348227_1348992_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.49974e-27
NZ_CP025117.1|WP_101016786.1|1351013_1352966_+|transpeptidase-family-protein	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	2.58107e-96
NZ_CP025117.1|WP_101016754.1|1336021_1336741_-|3-ketoacyl-ACP-reductase	gnl|CDD|236074	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	1.21298e-120

Protein sequences

>NZ_CP025117.1|WP_101016771.1|1341860_1343309_-|MBOAT-family-protein
MLFNSIDFAIFLPIVFIVYWFVTNNNLKLQNFLIVAASYLFYGWWDWRFLSLILFSTIVDYTVGRKLRIEENQTKRKFLLWTSIVINIGFLGFFKYYNFFLDNFITAFSFFGTEIKANSLNIILPVGISFYTFQTLSYTIDVYKRKLEPTKDFIAFSAFVSFFPQLVAGPIERATHLLPQFCKKRTFEYSKAADGMRQILWGLFKKIVIADNCAEFANQIFNNSSDLNGSTLVLGALFFTFQIYGDFSGYSDIAIGTSRLFGFDLTRNFNFPYFSRDIAEFWRRWHISLSTWFRDYLYIPLDGSRGGTWMKVRNTFAIFIVSGFWHGANWTFVVWGALNAIYFLPLLLTNNNRNNFEIVAQGKVFPSIKELMFMMLTFGLTVFAWIFFRANNIGHAISYISEILSPSLFSVPKFTEMGRALTTIILVAIFILIEWKGREEQYAIANLGIKLTPPLRYTVYYAIIIAIIWFAGKEQQFIYFQF
>NZ_CP025117.1|WP_157814093.1|1340936_1341794_-|hypothetical-protein
MEIFLRNIPNDYLFKKKYLDEHSSEIETLILGSSHSLYGFNPEYFTSKTFNASYISQTLNFDYEIFHKYKFKNLKTIVLPISYFSLWENLRNGPESWRVKNYILYLDLHSKLIIDHSEILSNRLNINLERLVLFYIFGKQNIISSKLGWGTNFKSEYAHDLIQTGKNRAYANTYDINSDEFQNIFNDNKLILNLFINECKDRNIRLLLLNPPAFKTFRNNLNANQLKITIETSEEFASEYDNCLYLNLIDDSNFIAEDFYDADHLSEIGAEKLSKLINKKINNWK
>NZ_CP025117.1|WP_101016767.1|1339989_1340238_-|hypothetical-protein
MENHLIKENGKKIELNTFYNSHNGYGKIAFKTVIKSEFSENEKIIGFVMFKLNYLIGYDKVELTKNNIGKNITLNECQYNQH
>NZ_CP025117.1|WP_101016764.1|1339615_1339852_-|hypothetical-protein
MQWKASLEKIEKRIDRDLFEISPKITLNEFKEIFTIKKLKEMKEDGQYLIIESIAPFTNKFIIYSPKFQSEIIKVKIK
>NZ_CP025117.1|WP_157814092.1|1339086_1339398_-|hypothetical-protein
MEKRHFVYKTARRQRLNGDPEAVWAIFEPPREGVSKTTDPIDALHDELLIVKPKDHQERLHYPSFTYDHFIEDEEEDAVDRFLEFCDLGQNCAVIDTENLNSL
>NZ_CP025117.1|WP_101016760.1|1337898_1338669_-|SDR-family-oxidoreductase
MKSNTKLTGKNVLITAGAQGIGASITKHFIDSGANVAIHYFSSADTANELTAYATSKGQKAVAINGDLTKEADANTLVDKTVEALGGLDILINNAGSLVARKLLSELEAEFWHKVMDINLTSMLFVTRAAAPYLAKNETSSIVNLASLAGRKGGHPGSLAYATSKGAILTLTRALSTELGPNGTRVNAVAPGLILGTSFHNTHTTKESAAETTAGIPIQRAGNAADVARAVIYLASEYDGFITGATLDINGGVYNM
>NZ_CP025117.1|WP_101016758.1|1337414_1337840_-|GNAT-family-N-acetyltransferase
MDFTIETCDKENIKTIVDGINEYNLDQAPALSDIWTRLEFVAKDKDGLEIGGVLAGIGYCNRLEIKILWVREGYRKKGIGTHILQHVETVAKEKGATIAMLDTFDFQAEKFYLNNGYIAIGEMKNFPKGHRRIYFSKDLTK
>NZ_CP025117.1|WP_101016756.1|1336930_1337155_-|hypothetical-protein
MKINLLSCDAQRPDRRAISKCIVEISLSVSDSLANELTDILLEGDPVDIELNDKNSGSALRALRKLDIDYEIID
>NZ_CP025117.1|WP_101016754.1|1336021_1336741_-|3-ketoacyl-ACP-reductase
MEHLKNKKAIITGGGRGLGKATAIAFAKEGIDVAITGRNEAVLKATVAELRVFGVNAIYSVFDVSNYEEVKSSIKTIVETLGTVDILVNNAGIAAFGTFNDMEVSQWSQIIQTNVMGMYYVTKEVLPHLINKNEGDIINVSSTAGLSGNASTSAYSASKFAVIGLSESLMKEVRKNNIRVCTLTPSTIASDMSIDLGIANKDSEDSVLQPEDFAELVVAGLKLPRRAMLKSAALWSTNP
>NZ_CP025117.1|WP_101016752.1|1334930_1336025_+|ABC-transporter-permease
MVSKTNSLSQIALQKFKKNFWGVFSLCFIGVVGVISVFAYVFAPDNSRNANQMHVSIHSKSPGFSVSMLTIPSQIKNEQSLFDKVFFGTKNTDAEIPISNYNLNQNQLTYTAYASDGLEGVTKTITADFIMQNSARQYIKEVTFYLGTDKYGRDLLSRLLVGARISFFIGFVAVFISLVIGIFMGSVAGYYGGKVDAFVMWIINVTWSIPTLLLVIAITLALGKGFWQVFIAVGLTMWVEVARVVRGQLISAKQMQYVTAARALGFDDYRIITKHILPNIMAPVIVICAANFAAAILIESGLSFLGIGAQPPMASWGAMIKDHYNYIILGKPYLAVLPGLCIMFLVMAFMLIGNALRDALDVKN
>NZ_CP025117.1|WP_101016774.1|1345385_1345916_-|hypothetical-protein
MTKTSSKIISIIFGVIAIYFTVNLIPDKTKKKFTALDKQYSFTKEISISEKFKTDFDSAYRIWLNFDNTNDSLLPIKKHLEVLRNGKPIELYGDRNNSFVSESGTKYELKLKLENADGNSSLNKLNIIIAEDNLPGPTYELYFEREYKWVFWTIDGIIISIALITGYFGFRKKASR
>NZ_CP025117.1|WP_101016776.1|1346578_1346923_-|hypothetical-protein
MNKKFDFHKTTMPASRKADYYLCCLDSSVFIDFNSSPDNEISLIRISFDGFGCCSIDKKAKNLNLEDSRKFIQEIEQKELNQIAITELVKKAIRINKEFIWTDALEKYGLIENE
>NZ_CP025117.1|WP_101016778.1|1346924_1347368_-|DUF4279-domain-containing-protein
MNYEKLTYSGTECNNYLYFSFDAEYFDTEKITEELNIKSTSVMIKKEPVPKSTAWKYQIDAGNEIDLESYLEKLIEILEPRIDIINKLKEKYILTTRIQFVIDIDINPESSTPYFGLNKRTIDFLAKTGTEVDFDLYKADTIGILQK
>NZ_CP025117.1|WP_101020915.1|1347477_1348083_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MHIKSAEFVTSNSDASKCPKDRLPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQLINHFTINKEWFLVDLPGYGYAKVSKSAKKVFQKFITHYFEQREQLVTAFVLVDIRHLPQPIDQEFMQYLGEKGIPFSIIFTKADKLKPKAIDNHVEAYKNILLETWEEMPNYFVTSSSKNIGKEDVLGYIDSLNQSFVID
>NZ_CP025117.1|WP_101016780.1|1348227_1348992_-|alpha/beta-hydrolase
MTRILKKEGKFNYIEVGEGQPIIVLHGLMGGLSNFEAVTTFFSTKGYKVIIPELPIYSKPLLKTNVKSFAKYLYDFILFKELDNVVLLGNSLGGHIGLYHTKMHPETVKALVITGSSGLYESAMGGGYTKRSDYEVIKKKAQEVFYDPAVATKAIVDEVYETVNNRNKLIKTLAIAKSAIRHNMAKDLPKMTTPTCIIWGKNDGVTPPEVADEFNALLPDSDLFWIDKCGHAAMMEHPDTFNQILFDWFKARKI
>NZ_CP025117.1|WP_101020918.1|1349275_1349746_+|division/cell-wall-cluster-transcriptional-repressor-MraZ
MNSLIGTYECKVDAKGRLMLPAALKKQLAPELQNGFVIKRAVFQECLELYPMQEWDALMLKVNKLNRFKKKNNDFIRRFTAGVKLVEVDTNGRLLIPKDLVGFASIAKDIVMSSAVNIVEIWDKTKYEKAIDDATLDFADLAEEVMGQDNEDDSIS
>NZ_CP025117.1|WP_101016782.1|1349723_1350629_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MKMTAYHNPVLLHETVDGLAIKEDGVYVDVTFGGGGHSREILNRLGENGKLYAFDQDKDALENAIDDPRFTLIHENFRYIKRFLRFHGVKAVDGVLADFGVSSHQFDVAERGFSTRFEAVLDMRMNQNDTLSAYHVINEYEEEQLKQVLSQYGELRSASAMARLIVEQRKTEIIKTSDQLKKVLQQFLSPKHENKILAQIYQAIRIEVNQEIEALKEFLQQTPEILKPEGRLSLISYHSLEDRLVKRFIRNGLFEGEPERDVFGRFEVPLKKVGGLIIPSKEEIKINNRARSAKLRIAEKV
>NZ_CP025117.1|WP_101016784.1|1350632_1350950_+|S-adenosyl-methyltransferase
MKKSIYSILRGTFLVSEDSFKNWRLILFISALAIVMIASSHSLDKKVYEIAKLNNQVKELRSELYDGRTRLMQLKMESSVVKKMKEKGLAPSVIPPKKIIVKSQT
>NZ_CP025117.1|WP_101016786.1|1351013_1352966_+|transpeptidase-family-protein
MFVFGVLVVVKLLTIQIVQGDEYRALADKRAIKNVVIPANRGNVYSSDGSLLATSIPKYDILFDAVTPSDKNFKANLIPLSEALSKYSGKSTTFYKKELGKARANKNRYFLLARNIGYSDYLKFREFPLLKLGAFKGGLIVEQKVKREHPLGEVAQRTIGYERTDDDGNVTRAGIDGAFGVDYLRGKDGKRLKQKIGKGQWKPIVDYDQVEPKDGFDVYTTIDVNIQDIAHHALLEQLELYEAEHGTVVVMEVATGEVKAISNLGKTKSGYYYEKRNYAVYESHEPGSTFKLMALMAALEDKKIDTSDIVDTGNGYKVFYGRGIKDSHGNGKISAAKVLEVSSNIGMATIINNAYAKDPKRFLDILSRWNLDKKLGISIKGEGEPMIPKPGDDKWSRNALPSIAYGYNLRLTPLQTLTFYNAVANNGVMVKPRFIREVKELDKQIESFEKSIINPKICSDATLNAAKEMLKNVVIRGTGRSLYSDYFSMSGKTGTARVEYWMDDWARNPRYISSFAGYFPSDEPKYSCIVIIHKPSIKKGFYGADVSGPVFKKIAQKIFTDTPLIDQVASLNVDDKAVDKEYEGYYKTANKYKTIMPDVTGLPVMDALALLENMNVKVNVNCKGVGTITSQSVNKNTKLKNNQIIVLEAS
>NZ_CP025117.1|WP_101016788.1|1352962_1354426_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MNLLKDILYKVTLDAVVGSTDIMVHNIHFNSRDIAVEDVFVAIKGSLTDGHQYIDKAIKQGAIAVVCEVLPIETLAHVTYIQVDDSSRALAIMAANFYGNPSENLKLVGVTGTNGKTTIASLLYQLFKKAGYKVGLLSTVKIMVDNTEHAATHTTPDSLTINGYLKKMNDEGVEFCFMEVSSHGIHQNRTLGLKFEGGIFTNLSHDHLDYHDTFAEYRDVKKRFFDELPKTAFALTNGDDKNGSVMLQNTKAKQYTYALKTYADYKAQILENQFNGLLLKLNDYEVWIRLIGEFNAYNILAIFATAELLGLEKEETLRLISELESVSGRFQFLISDTKITAIVDYAHTPDALQNVLQTINDIRTKNEDVITVVGCGGDRDKTKRPKMGHIASALSTKVIFTSDNPRSEVPETIIEDIEKGVEPQNFKKTLSIVDRKQAIKTACQLANPNDIILIAGKGHETYQEVKGERSDFDDFKIVKEFLKQLQK

Crispr_ID: NZ_CP025117_8

• CRISPR_ID: NZ_CP025117_8
• CRISPR_location: 2920033-2920139
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP025117_8

Consensus_repeat	Method
CCATCTGTATCAGGACAACCACCAAA	CRISPRCasFinder

spacers of NZ_CP025117_8

>8.1|2920059|55|NZ_CP025117|CRISPRCasFinder
TTCAATTAAACCTTTTACTTTAGGACATAAATCATCTTTATCAGCAACACCGTCA

CRISPR arrays and Neighbor proteins around NZ_CP025117_8

CRISPR arrays

The CRISPR arrays of NZ_CP025117_8

>merge|NZ_CP025117|8|2920033-2920139|CRISPRCasFinder
CCATCTGTATCAGGACAACCACCAAATTCAATTAAACCTTTTACTTTAGGACATAAATCATCTTTATCAGCAACACCGTCACCATCCGTATCAGGACAACCACCAAA

>NZ_CP025117|8|5|2920033-2920139|CRISPRCasFinder
CCATCTGTATCAGGACAACCACCAAA	TTCAATTAAACCTTTTACTTTAGGACATAAATCATCTTTATCAGCAACACCGTCA
CCATCCGTATCAGGACAACCACCAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101020994.1|2907134_2907362_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101018621.1|2914239_2916744_+|copper-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319783
NZ_CP025117.1|WP_101018628.1|2924471_2926007_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|223959
NZ_CP025117.1|WP_101018627.1|2923976_2924375_+|DUF983-domain-containing-protein	unknown	unknown	gnl|CDD|368773
NZ_CP025117.1|WP_101018622.1|2916748_2918518_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|379862
NZ_CP025117.1|WP_028282170.1|2926126_2926318_-|cold-shock-protein	unknown	unknown	gnl|CDD|224197
NZ_CP025117.1|WP_101018626.1|2922891_2923776_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|131350
NZ_CP025117.1|WP_101018632.1|2928508_2929387_-|hypothetical-protein	unknown	unknown	gnl|CDD|227259
NZ_CP025117.1|WP_101018630.1|2927377_2928226_-|NAD(P)H-binding-protein	unknown	unknown	gnl|CDD|187578
NZ_CP025117.1|WP_101018616.1|2907619_2908033_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101018633.1|2929481_2930360_-|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|378964
NZ_CP025117.1|WP_101018618.1|2912010_2912364_+|four-helix-bundle-protein	unknown	unknown	gnl|CDD|183395
NZ_CP025117.1|WP_101018617.1|2908150_2911936_+|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl|CDD|226220
NZ_CP025117.1|WP_101018625.1|2921894_2922797_+|EamA-family-transporter	unknown	unknown	gnl|CDD|274527
NZ_CP025117.1|WP_157814158.1|2926731_2927337_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101018623.1|2918753_2919329_-|PorT-family-protein	unknown	unknown	gnl|CDD|372635
NZ_CP025117.1|WP_101018619.1|2912363_2913602_+|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_CP025117.1|WP_101018631.1|2928231_2928432_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP025117.1|WP_101018620.1|2913604_2914162_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP025117.1|WP_101018615.1|2906768_2907134_-|DUF2237-domain-containing-protein	unknown	unknown	gnl|CDD|378344

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101018621.1|2914239_2916744_+|copper-translocating-P-type-ATPase	gnl|CDD|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP025117.1|WP_101018628.1|2924471_2926007_-|SDR-family-oxidoreductase	gnl|CDD|223959	COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only].	3.88469e-12
NZ_CP025117.1|WP_101018622.1|2916748_2918518_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	2.90152e-77
NZ_CP025117.1|WP_101018630.1|2927377_2928226_-|NAD(P)H-binding-protein	gnl|CDD|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.49521e-73
NZ_CP025117.1|WP_028282170.1|2926126_2926318_-|cold-shock-protein	gnl|CDD|224197	COG1278, CspC, Cold shock proteins [Transcription].	7.67782e-21
NZ_CP025117.1|WP_101018632.1|2928508_2929387_-|hypothetical-protein	gnl|CDD|227259	COG4922, COG4922, Uncharacterized protein conserved in bacteria [Function unknown].	5.02365e-11
NZ_CP025117.1|WP_101018615.1|2906768_2907134_-|DUF2237-domain-containing-protein	gnl|CDD|378344	pfam09996, DUF2237, Uncharacterized protein conserved in bacteria (DUF2237). This domain, found in various hypothetical bacterial proteins, has no known function.	1.93806e-66
NZ_CP025117.1|WP_101018633.1|2929481_2930360_-|AraC-family-transcriptional-regulator	gnl|CDD|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.14348e-16
NZ_CP025117.1|WP_101018618.1|2912010_2912364_+|four-helix-bundle-protein	gnl|CDD|183395	PRK12275, PRK12275, hypothetical protein; Reviewed.	1.17951e-33
NZ_CP025117.1|WP_101018617.1|2908150_2911936_+|efflux-RND-transporter-permease-subunit	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	2.5254e-155
NZ_CP025117.1|WP_101018625.1|2921894_2922797_+|EamA-family-transporter	gnl|CDD|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	1.21672e-07
NZ_CP025117.1|WP_101018619.1|2912363_2913602_+|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	6.84526e-17
NZ_CP025117.1|WP_101018623.1|2918753_2919329_-|PorT-family-protein	gnl|CDD|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	3.5843e-16
NZ_CP025117.1|WP_101018626.1|2922891_2923776_-|helix-turn-helix-domain-containing-protein	gnl|CDD|131350	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA. This putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (pfam02311) and the helix-turn-helix DNA-binding domain (pfam00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway.	3.60765e-19
NZ_CP025117.1|WP_101018627.1|2923976_2924375_+|DUF983-domain-containing-protein	gnl|CDD|368773	pfam06170, DUF983, Protein of unknown function (DUF983). This family consists of several bacterial proteins of unknown function.	2.4152e-06
NZ_CP025117.1|WP_101018620.1|2913604_2914162_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.2233e-15

Protein sequences

>NZ_CP025117.1|WP_101018623.1|2918753_2919329_-|PorT-family-protein
MKKLLFITAITIFGFTNAQAQEVEFGAKIGANFTSIYGDTNDNVELITSVINFGVYSEISLTEKFSFQPEIMYSIQGFSINDDVTGTDDIVSLNYLNVPLMGKYHVTKGLSLEAGPQIGFLLSAKNEDIDVKDTFKSIDVGVNLGLEYKLENGLNFGARYNFGLLNINDIEGSSDKFKNGVAQFTIGYSFF
>NZ_CP025117.1|WP_101018622.1|2916748_2918518_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKYIIYTAVLAVGLLLGWFLFGGASNTETEHKHDAKAETHQMWTCSMHPQIMQPESGSCPICGMDLIPAESSAKGLLADQFKLSENAMALANIQTSIVGNGNTEDNAITLSGKIVENEDNTAIQPAHFDGRIEKLYIKSLGEKVNKGQAIAKIYSADLIAAQQELITTYSIRESQPQLFKAVQNKFKNWKIHGSQLDDVLKTGQVKTSFTIYSHVSGVVTEIAVSDGAHIMDGKPIFKVSNLATVWANFDVYEKQISQFKKGQNIDVVTNAYANKVFKGTVDFIDPILDTRTRTVKLRVVLDNKDQILKPGLFVEGKIKGITASKSDALSIPTTAVLWTGKRSVVYIKSKPNEPVFEMREITLGIQIGDKYQVLEGLNAGDEVVTNGTFTVDAAAQLQGKKSMMNKKGGKVMTGHEGHLGMETTTNTTHQKGANTERIDVSKQFQNQLKVVFNDYIQLKEALLKDDINTIKAESKQLLNDLSKVDMTLLTSQEAHKQWMSLEKELKSVTTLLSNTSEIEDIRLHFKNLSSKLTEVIEVFGINEKVYHQFCPMGDNNKGVYWLSKKEHVINPYFGGKMLTCGEVRQTIE
>NZ_CP025117.1|WP_101018621.1|2914239_2916744_+|copper-translocating-P-type-ATPase
MKHTYHIHGMTCNGCRSHVEDTLLKVKGVLKATVDLEKAEATIEMDSHITLETFQEALKNDGGRYSIHNLGDHNHAKDNSNTSVEIKKGHGTGTFYCPMHCEGDKTYDKSGDCPVCGMDLVEEQNLSNTTTTQWTCPMHPEVIKDEPGACPICGMDLVPLEADASAEDKTYNKLLKKFWIAVAFTVPIFLIAMSEMLSNNPLYTILEQKTWNWIQFVLSIPVVFYATWMFFTRAWTSIKTRNFNMFTLIGIGSGIAWLFSVFAMLFPDVFPIDFKTADGNVFVYFEAATVILTLVLLGQLLEAKAHSQTSGAIKELLKLVPATATLVTEGEDKIIAIDKIEQGNLLRVKPGEKIPVDGSIVEGQSSIDESMITGEPIPVDKIVADKVTSGTINGTKSFVMKAEKVGSETLLSQIIHMVNNASRSKAPIQKLADKIAKYFVPTVLLVSIITFILWAVFGPEPAYVFAFVNAIAVLIIACPCALGLATPMSVMVGVGRGAQSGVLIKNAEALETMNKVDVLIVDKTGTITEGKPSVEKVIAVTKIEQELLLHYIASLNQYSEHPLAEAIVNYGKSKQVAITKVNDFEAVAGKGVIGTIDNKKVALGNAKLLEQFSISISESLASQVIAEQEQGKTVSYITVENEAVGYVTIFDAIKKTSQEAIKQLQDNGIDVIMLTGDNKNTAKAVAEQLKLKHYKAECLPEDKLNEIKKLQQQGKVVAMAGDGINDAPALAQSDVGIAMGTGTDVAIESATITLVKGDLQGIVKAKNLSHGVVKNIQQNLFFAFVYNVIGVPIAAGILYPFFGLLLSPMIAALAMSFSSVSVIANALRLRNIKI
>NZ_CP025117.1|WP_101018620.1|2913604_2914162_+|helix-turn-helix-transcriptional-regulator
MGQTLLIKNMVCARCKSTIIDLLESKGLDIDAIELGKIIVKQEVIEQYTAIKNELKDLGFELIEDESKMLIEKIKVVVIQCVSENNVNAVFSKISKEIDKNDSAISKLFSKSEGITLEKYIINLKIEKVKEYIQLNQLNFSEIAHNLNYNNSSHLAKQFKTVTGMSMSEYRKLQDWDRKELDQIV
>NZ_CP025117.1|WP_101018619.1|2912363_2913602_+|TolC-family-protein
MTNSIKKVLHFIVFSFSLFSVHSVNSQELETYIATALENNPEIQKFELQYAIATEKVNEVNTLPNTDFSASYFVIEPETRTGTQRFKVSAKQMFPWFGTITSRENYASALAEIDYEAIVIAKRKLIVSVLESYYKLYVNKAKQAVLTENIELLDTYEALALTSVEVGKASAVDVFRLQIRQNELEQLQQVLEYEFLAEQTAFNKLLNRDSAIEVPIVQSLLMPSEALEITTENLALHPELLKYDRLFNSVTQSELLNQKESHLSFGFGIDYINIQPDSDITFSKNGQDILMPTVSLSIPIFNKKYKSKTKQNKLQQQEIEFQKQDRLNTLETLLDKAINDRKSARISYNTQVKNLKQAKDAESILVRSYETGTIDFNDVLDIQELQLKFQINQIESIKSYYLQTTIINYLIQ
>NZ_CP025117.1|WP_101018618.1|2912010_2912364_+|four-helix-bundle-protein
MGRSILKDKSYAFAILIVKLSQLLVTEQKEYVLSKQLLRSGTAVGALIREAEFAQSKADFIHKMSIALKEANETLYWIDLLKDTNYIDKQQYENHFHLNKELVAMLVSSIKTSKSRL
>NZ_CP025117.1|WP_101018617.1|2908150_2911936_+|efflux-RND-transporter-permease-subunit
MLNRSIKFLIENKLVAVLLLSLFIGWGTVNAPFNWDTGFLPSDPVAVDAIPDIGENQQIVFTKWDGRSPQDIEDQITYPLTSSLLGIPGVKTIRSSSMFGFSSIYVIFEEDVEFYWSRSRILEKLNSLPSNLLPEGVNPALGPDATGLGQIFWYTLEGRDADGNVTGGWDLQELRSIQDYYVKYGLSSASGVAEVASIGGYVQEYQVDVNPEIMRQYKIGLNQVVKAVKNSNQDIGAQTLEINQAEYLVRGLGYVKSVEDIENAVVTSADFTSIKIKDIGKVTLGPAARRGILDKEGAEVVGGVVVARYGANPMEVITNVKAKINELKGGLPSKVLADGRTSQLTVVPFYDRTELIVETLDTLNEALTLEILITILVIIIMVFNLRASILISGLLPVAVLMVFVAMKLFNIDANIVALSGIAIAIGTMVDVGVILAENMIRHLDDNENVIPTARGTSDEDSHQDNHNAVENNKLSINEIIYNATAEVSGAILTAVLTTIISFVPVFTMIGAEGKLFRPLAFTKTMALSASLVIALFLIPPFAAYLFRKTTLKNSFRYFLNGVLILAGIAIIIYGFWLGLLLVAFGITGLLGVLERLDKKKINLINIIISSIAIVCLLAEYWRPLGFNRSIIVNLIFVAIICFGILGVFSVFRRYYSQILNWALANKVLFLIIPATVLISGFWIMKNTGKEFMPSLNEGSFLLMPTSLPHAGVEENKRVLQQLDMAVATIPEIETVVGKAGRTDSPLDPAPLSMYENMIQYKSEYMRNSEGKRQRYKVNADGMFELKNGMSLRAEQSEAWQSLNAKEQLIEDNNGEYYRNWRPEIKSPDDIWNEIVRVTKLPGVTSAPKLQPIETRLVMLQTGMRAPMGIKVKGQDLKQIEAFGLELERLLKQAEGVKIEAVFADRIVGKPYLLIDIDREKIARYGISIADVQSVLKVAIGGMALTQTVEGRERYAVRVRYPRELRSNPEDLKDIYIPVETGSPVPLSELATIRYEQGPQVIKSEDTFLVGYVLFDKLDGFAEVDVVENAQALFQQKIESGDLIVPKGISYKFTGTYENQLRAEKTLSVVVPLALAIIFLILYFQFKSVSTSLMVFTGITVAFAGGFIMIWLYGQDWFFNFSLFGENMRDLFNMKTINLSVAVWVGFIALFGIATDDGVVMATYLTQTFDREKPSDKKSIRAAALHAAEKRIRPCLMTTVTTILALLPVLTSTGKGSDIMIPMAIPIFGGMVIDITSYFIVPVLYSWREEIKVKRLKIKVKN
>NZ_CP025117.1|WP_101018616.1|2907619_2908033_+|hypothetical-protein
MKQVVHKIMSFAMALVVLLSTMSFTFNMHYCGDTLVETALFQKAKGCGMEIAQPASEGSVITKKSCCSDEQLVVDGQNELKLNLDQISFEQQFFITSFVYTYSTLFEGVDNNTATFETYHPPLVRTQIFKLDETYLI
>NZ_CP025117.1|WP_101020994.1|2907134_2907362_-|hypothetical-protein
MELINEALDFEHAKMSHMSTSDRVAASREAKRLILALNEIYKKSKDTSLMDIMKRLTAKKKKIEKRLIGRPESAF
>NZ_CP025117.1|WP_101018615.1|2906768_2907134_-|DUF2237-domain-containing-protein
MTELNVLGTKLKPCCTNPTTGYFRDGYCRTMSEDSGTHIISAIMTSEFLAYTKLKGNDLSTPIPHWQFLGLVAGSKWCLCISRWLQAENDGVAPPVVLESTHQKALDYTSIDLLKQYQAMV
>NZ_CP025117.1|WP_101018625.1|2921894_2922797_+|EamA-family-transporter
MWMYLGLLAALFLGLHNLCKKHAVQGNEVFPVLLGTVSSGFLFVGSFYVLSFIYPDYALAHGYHFQELSWQSHGFIFIKSIIMASSWVLAYQALKHLPITIVTPIRSAGPFFTFIGAIVIYKESPNPYQWIGFFLIIFSVLLYSKIGKKEGINFKSNKWIFAIIGATFLGASSGLYDKFLIQNLHLNPQTLQFWFCLYTILILLVILTITWFPYAKKRQAFKFRWSIIAVGILLQAADYFYFKALQDPEALIMLLSAIKRSQIIIAVVIGGVVFKEKNKRQKLIPLAGIMLGVFLILYSN
>NZ_CP025117.1|WP_101018626.1|2922891_2923776_-|helix-turn-helix-domain-containing-protein
MNTIPILNIEQFEEDSFSNFYSNDLSTHLKNNALMVHKPHSHNFFLCVFFLEGTGTHEIDFSSYDVTKGSVFFLRPGQTHSWSFTSAPKGYIFFHTQDFYECYFLNKSITQFPFYYSYENPPYLGLSETEIKLVNSRFEDINTEFHQTNIYKKQKLASLINLTYIDLSRIYTAIDAKHDVLSSSYLKALSVLEQTIETFYKTEKSAKFYANKLNITVKHLNRITKSTINKTTTQLITDRVLLEAKRLLVHSNNSFSRTAETLGYNDYAHFSKLFKMKVGMTPLDFKKRYEIDDN
>NZ_CP025117.1|WP_101018627.1|2923976_2924375_+|DUF983-domain-containing-protein
MEFLKGTKINSILTGNCPVCQNESMYTVNNPYKVTSTLTMEERCSHCNTKYKIEPSFFFGAMYVSYPVGIFFGTISFFITFYLLNLSFMTSYIVLIIVMLLLLPIILRISRNIWINIFMRFDKTKSLAVKEN
>NZ_CP025117.1|WP_101018628.1|2924471_2926007_-|SDR-family-oxidoreductase
MSDNNTNQDIQNCILTLQRLVDDTNQLFDMPEEQRVALYKVAGELSRPNRDEFQRRRKDAKKAAKRKMIESDKHARKTTGIRSAREATLFVAPKLLAAAVIPEDTPELESPRNCYVCKTVYTKLHHFYDTMCTDCGDLNYAKRFQTTDLKDQVAVITGSRLKIGYHITLMLLRSGATVVATTRFPADSAIRFSKEEDYKDWSDRLHIHGLDLRHIPSVEIFCNYIEQKYDRLDILINNAAQTVRRPSGFYFHLMENEKLPIDQLPKLAQTLLQDHESCLEELSSLSVGPSKTDKNNVLPVTWHGPEPGIGLRSSAELSQIPYSFDNSLQTEEVFPEGQLDADLQQVDLRKTNSWRLKLGEIETTEMVEVQLVNAVAPFVLCNRLSNIMMKENTGKKHIINVSAMEGKFHRFKKEDRHPHTNMAKAALNMLTHTSATTFAKSGIYMNAVDTGWVTDEDPAALSKQKVEVHDFQPPLDIVDGAARVMDPLIDGINTGKHWCGKFLKDYFPIDW
>NZ_CP025117.1|WP_028282170.1|2926126_2926318_-|cold-shock-protein
MSKGTVKFFNDTKGFGFITEEGVDKDHFVHISGLIDEIREGDEVEFDLQEGNKGLNAVNVKVI
>NZ_CP025117.1|WP_157814158.1|2926731_2927337_+|hypothetical-protein
MPTLVFTILLKYVNRTRHQSKALFIVALSAIVLSDFLTFYDYHAYFMWITILTSTYLICCSFIIIKYLNKGKLKAMLYFSVFIGFLLATYIVYSVLDLIINYLPEGMLLFVLFAALCLLCFIIICSMIYVNDNYDNATLLLGSVIFNMFHMGLSPINEFISYNATFTVLIAIAHILAIYLFMKFISETKIIKAEDVKEKFF
>NZ_CP025117.1|WP_101018630.1|2927377_2928226_-|NAD(P)H-binding-protein
MRIAVTSVSGQLGSAIAKYLISEIGKENVIGIARTPEKAKHLGIQIRKGDYNSRQEFDQALLGVDVVLLVSGMDTPDKRIQQHRNVIEAAKINGVKKIVYTSIVGNEEQNSFTPIVESNRQTEKDIQNSGLQWSIGRNGIYIEPDIEYIDNYVQAGEIRNCAGEGKCAYTSRNELGYAYTKMLTEEKHNNNIYNLVGEPITQKQLASYINQVYNTELEFKAISVEEYKQERIAELGEFMGTVITGIYEGILNGAYNVKSDFQKAAGRAHQSTLDVIKQLKLS
>NZ_CP025117.1|WP_101018631.1|2928231_2928432_-|hypothetical-protein
MSDVRTCPTCGAKATYKVTETNEVFTAVQDEDALKKNVKLKKAMAAFKTKAEVLEKELQALKTDKK
>NZ_CP025117.1|WP_101018632.1|2928508_2929387_-|hypothetical-protein
MKTTITTLALVMTLMSCKSEKDLNAKTISKDTNKMELSNKDKTVAVLKSIETGDTVAVSYINPGNYKQHNLVVADGLAGFGALLSHAPKGGFKVNTVRAFQDGAYGFAQTEYDFFGPKIGFDVFRFENGQVVEHWDNLIEKAALNPSGHSQTDGAMLVTDLNKTEANKIVVSNFLNDILVNGKMDKIANYFDGDHYIQHNPNIGDGLSGLGQALEAMAKQGITMEFTKVHKVLGQGNFVLAISEGKFAGQPTSYYDLFRVENNKIAEHWDIMETIAPEADRKNTNGKFNFPK
>NZ_CP025117.1|WP_101018633.1|2929481_2930360_-|AraC-family-transcriptional-regulator
MEKEIPHIVFDSQKPDNSGIEILTIKSLSLRKKDIVHNPEKAHQLAFNMIVFYTAGESKQLVDFVWHDVKKNTIIHLSKGQINAFQFNDHLEGFIILFTEDYLKQQINTLPKNELIRLFNSHLFSPIIQVPEAANVSNYIQLFYEEYSSLQEDYNQENTYSALYSIIFSKLERLKQYQTFHLKRSDKLNSFLEFKSLLEVHFNTSRNADFYAEKLNISYKHLNNICKEMVTVTAKQFIDAFVILEAKRLLINSEIKSTELAYSLGFEESTNFVKYFKKHTGFTPNSFKKDYI

Crispr_ID: NZ_CP025117_9

• CRISPR_ID: NZ_CP025117_9
• CRISPR_location: 3129316-3129411
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP025117_9

Consensus_repeat	Method
AACTCTTGTTGTTGGAGGTGTAACCAT	CRISPRCasFinder

spacers of NZ_CP025117_9

>9.1|3129343|42|NZ_CP025117|CRISPRCasFinder
TACTGATCTAGTAACTTCTTTAGTTACAGCAGGTACATCTAC

CRISPR arrays and Neighbor proteins around NZ_CP025117_9

CRISPR arrays

The CRISPR arrays of NZ_CP025117_9

>merge|NZ_CP025117|9|3129316-3129411|CRISPRCasFinder
AACTCTTGTTGTTGGAGGTGTAACCATTACTGATCTAGTAACTTCTTTAGTTACAGCAGGTACATCTACAACTCTTGTTGTTGGAGGTGTAACCAT

>NZ_CP025117|9|6|3129316-3129411|CRISPRCasFinder
AACTCTTGTTGTTGGAGGTGTAACCAT	TACTGATCTAGTAACTTCTTTAGTTACAGCAGGTACATCTAC
AACTCTTGTTGTTGGAGGTGTAACCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025117.1|WP_101018799.1|3124813_3125854_-|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|273464
NZ_CP025117.1|WP_101018792.1|3115416_3116868_-|oligosaccharide-flippase-family-protein	unknown	unknown	gnl|CDD|240533
NZ_CP025117.1|WP_101018803.1|3130964_3131984_-|threonine-aldolase	unknown	unknown	gnl|CDD|178323
NZ_CP025117.1|WP_101018800.1|3125927_3128060_-|S9-family-peptidase	unknown	unknown	gnl|CDD|224684
NZ_CP025117.1|WP_101018796.1|3121041_3122103_+|transporter	unknown	unknown	gnl|CDD|379259
NZ_CP025117.1|WP_101018794.1|3118202_3120641_-|YfhO-family-protein	unknown	unknown	gnl|CDD|226888
NZ_CP025117.1|WP_101018808.1|3136908_3138525_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226434
NZ_CP025117.1|WP_101018801.1|3128130_3128451_+|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl|CDD|184771
NZ_CP025117.1|WP_101018797.1|3122117_3123239_+|GTP-cyclohydrolase	unknown	unknown	unknown
NZ_CP025117.1|WP_101018810.1|3140267_3140858_-|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP025117.1|WP_101018793.1|3116881_3118168_-|glycosyltransferase	unknown	unknown	gnl|CDD|340825
NZ_CP025117.1|WP_101018795.1|3120671_3120923_-|DUF4834-family-protein	unknown	unknown	gnl|CDD|374375
NZ_CP025117.1|WP_157814164.1|3132085_3133196_+|peptide-chain-release-factor-2	unknown	unknown	gnl|CDD|234799
NZ_CP025117.1|WP_101018807.1|3134057_3136478_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|379720
NZ_CP025117.1|WP_101018811.1|3141016_3142252_+|imidazolonepropionase	unknown	unknown	gnl|CDD|236478
NZ_CP025117.1|WP_101018809.1|3138717_3140115_+|class-II-fumarate-hydratase	unknown	unknown	gnl|CDD|234779
NZ_CP025117.1|WP_101018812.1|3142683_3143568_-|chromosome-partitioning-protein-ParA	unknown	unknown	unknown
NZ_CP025117.1|WP_101018806.1|3133590_3133968_+|arsenate-reductase	unknown	unknown	gnl|CDD|239332
NZ_CP025117.1|WP_101018798.1|3123369_3124629_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|99747
NZ_CP025117.1|WP_101018805.1|3133200_3133542_+|arsenate-reductase-(glutaredoxin)	unknown	unknown	gnl|CDD|239332

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP025117.1|WP_101018799.1|3124813_3125854_-|pyridoxal-phosphate-dependent-enzyme	gnl|CDD|273464	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven. [Amino acid biosynthesis, Serine family].	2.03588e-130
NZ_CP025117.1|WP_101018792.1|3115416_3116868_-|oligosaccharide-flippase-family-protein	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.07753e-22
NZ_CP025117.1|WP_101018803.1|3130964_3131984_-|threonine-aldolase	gnl|CDD|178323	PLN02721, PLN02721, threonine aldolase.	4.60739e-125
NZ_CP025117.1|WP_101018800.1|3125927_3128060_-|S9-family-peptidase	gnl|CDD|224684	COG1770, PtrB, Protease II [Amino acid transport and metabolism].	0
NZ_CP025117.1|WP_101018796.1|3121041_3122103_+|transporter	gnl|CDD|379259	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation.	9.8753e-20
NZ_CP025117.1|WP_101018794.1|3118202_3120641_-|YfhO-family-protein	gnl|CDD|226888	COG4485, COG4485, Predicted membrane protein [Function unknown].	4.4411e-07
NZ_CP025117.1|WP_101018808.1|3136908_3138525_-|sensor-histidine-kinase	gnl|CDD|226434	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms].	3.09937e-46
NZ_CP025117.1|WP_101018801.1|3128130_3128451_+|YbaB/EbfC-family-nucleoid-associated-protein	gnl|CDD|184771	PRK14623, PRK14623, YbaB/EbfC family nucleoid-associated protein.	9.57506e-50
NZ_CP025117.1|WP_157814164.1|3132085_3133196_+|peptide-chain-release-factor-2	gnl|CDD|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	3.34356e-173
NZ_CP025117.1|WP_101018810.1|3140267_3140858_-|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	6.23333e-17
NZ_CP025117.1|WP_101018793.1|3116881_3118168_-|glycosyltransferase	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	2.31191e-38
NZ_CP025117.1|WP_101018795.1|3120671_3120923_-|DUF4834-family-protein	gnl|CDD|374375	pfam16118, DUF4834, Domain of unknown function (DUF4834). This family consists of uncharacterized proteins around 90 residues in length and is mainly found in various Parabacteroides and Bacteroides species. Protein in this family are characterized by a strongly conserved KDEGEYVD motif on the C-terminal and a very divergent N-terminal. The function of this family is unknown.	1.43055e-11
NZ_CP025117.1|WP_101018807.1|3134057_3136478_+|TonB-dependent-receptor	gnl|CDD|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	1.10812e-100
NZ_CP025117.1|WP_101018811.1|3141016_3142252_+|imidazolonepropionase	gnl|CDD|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP025117.1|WP_101018809.1|3138717_3140115_+|class-II-fumarate-hydratase	gnl|CDD|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP025117.1|WP_101018806.1|3133590_3133968_+|arsenate-reductase	gnl|CDD|239332	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.	5.40882e-25
NZ_CP025117.1|WP_101018798.1|3123369_3124629_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|99747	cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.	4.21117e-106
NZ_CP025117.1|WP_101018805.1|3133200_3133542_+|arsenate-reductase-(glutaredoxin)	gnl|CDD|239332	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.	2.83059e-48

Protein sequences

>NZ_CP025117.1|WP_101018801.1|3128130_3128451_+|YbaB/EbfC-family-nucleoid-associated-protein
MFGDLQGMMGKLKETQQKVEATKKRLDTVLIDQSSSDNLLQITITANREIKAINIKDELLNDKEQLEDYLILTLNKAITRATEINDTEIAAVTKEGMPNIPGMDMF
>NZ_CP025117.1|WP_101018800.1|3125927_3128060_-|S9-family-peptidase
MKKLFLIIILSFTFVVSCNKEKRMTKTKILPPVAKKVKKELTIHEDTRVDNYYWLNQREDQEVLDYLNAENTYTESVLKHTEPFQKSLFDEMKSRIKEDDQSVPYKHNGYWYITRFEEGSDYPIYTRKKESLEAEEEIMFDCNTMAEGHSYFKLGGISISTDNTLAAYAVDTVSRRQYTIYVKNLITGETYLDKIENTSGGATWANDNKTLFYSKKDEVTLRSDKIYKHKLGNEASDDVLIFNEKDETFNTYVYKTKSKKYLVIGSSSTLTTEYSILEADTPDGDFRLFNARTRDLEYSIAHFEDNFYVITNKDGATNFKLQKTSESATTSDNWVDVLPHRADVLLEDIEIFKDYLVVNERENGLNQLRIISWNGKEDYYLDFENETYTAQIGNNPDFDSETLRYGFNSLTTPSSVIDYNFITKTKTVKKEQQVLDKNFNKDNYTSKRIWATARDGEKIPMSVVYRKDIKLNGENPVLQYAYGSYGATIDPYFSTIRLSLLDRGFIYVISHIRGSEYLGRPWYENGKLLTKKNTFTDFVDCSKYLIENHYTSSNHLYAMGGSAGGLLMGAIINMNPELYNGVIAAVPFVDVVTTMLDDSIPLTTGEYDEWGNPNEATYYNYMKSYSPYDNIEAKAYPNLLVTTGLHDSQVQYWEPAKWVAKLRELKTDTNLLLLKTDMEAGHGGASGRFEALKEVALEYAFIFDLEGINK
>NZ_CP025117.1|WP_101018799.1|3124813_3125854_-|pyridoxal-phosphate-dependent-enzyme
MEQKKQVFDNVLDLIGNTPMIKLKKMTSEFKGNYLAKVEAFNPGHSSKDRIALYIIEQAEKQGILKPGDTIIETTSGNTGFSIAMVSVIKGYDCILAVSSKSSADKIDMLKNMGAKVYVCPANVSADDPRSYYQVAKRLHDEIKGSVYINQYFNQLNIEAHYHSTGPEIWNQTEGKITHLVACSGTGGTISGTAKYLKEQNPNIKVIGVDAFGSVLKKYHETREFDEKEIYPYRIEGLGKNLIPTATDFDSIDEFIKVSDEESAHTAREIAQTEGLFVGYTSGAAMQALKQLNELGKFKDTDNIVVIFPDHGSRYMSKIYSDKWMSDQGFFDSKNAEAAQSIQYIK
>NZ_CP025117.1|WP_101018798.1|3123369_3124629_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKDLFEKIYKDKGPLGKWAAQAEGYFVFPKLEGEISNRMKFQGKDVITWSINDYLGLANHPEVRKVDAEAAAQYGSAYPMGARMMSGHTDLHEQLQNELAEFVQKEAAYLLNFGYQGMVSTVDALVSKDDIIVYDVDAHACIIDGVRLHHGKRFTYKHNDMESLEKNLERATKMAMTTGGGILVISEGVFGMRGEQGRLKEIVALKEKFNFRLFVDDAHGFGTLGKTGAGAGEEQGVQDDIDVYFATFAKSLASTGAFIAADQEIIDYLKYNLRSQMFAKSLQMQLVVGALKRLDMLRTMPELKQNLWKIVDALQSGLKSRGFDIGTTQSCVTPVYLNGSIPEAMALVRDLRENYGIFCSIVVYPVIPKGLILLRMIPTATHTLQDVTETLDAFDAIRERLENGTYKRMSAALIKAMGE
>NZ_CP025117.1|WP_101018797.1|3122117_3123239_+|GTP-cyclohydrolase
MITTKKVVSKADYKAFVKFPFEIYKDSKYWVPPIISQELATFDADKNPIFNDAEATLFLAYKDNKVVGRIAAIINWLEVKDQNIKKMRFGWFDFIDDLEVSKALLNEVYTIGKAKGLEYTEGPVGFSNLDKVGVITEGFNTVGNMITWYNHPYYVKHYQEHEFSVEKKYSESRFPFENVKPEFFYKAQELIKRRYQLKALDLKKTSQVMPYVDQMFDLFNDSYASLSSFVAITDIQKEYFKKKFISFINPEYIKFVVDKDDKLVAFAVVMPRFADALKQMNGKLLPFGFLKLLKAKKESKDVMFYLIGVHPDYQNKGVHAVIFNEYYNTFTERGIKTCYRTPELEDNEAIHKIWKHFDPEVYIRRCTFKKNLD
>NZ_CP025117.1|WP_101018796.1|3121041_3122103_+|transporter
MLNPKLILHYILLLASFTATAQYTDVINSNRPGVSRSAFSVGKNVAQLEVGPYLVKEEHTPLKNEASGFGIDFAARYGLLWEQLELNIEGTYQNDTFTDNRSASFPVETDRANFRYLTLGAKYLVYDPYKKSGDAKPNIFSYHANKKFRWSSLIPAVAVYVGANYDAENNTYVPYSNPLTSPNYEGGFSPKVMLATQHNFNSGYVLVMNFAKDRIGTDYSDFQYILTLTKAINEKWVVFGETEGIKNDYYADNLFRVGGAYLWSRDFQLDTAITFNTKDTPSVFGVNFGASYRLDFHKDPDVDKDNGTDVLEEYERKANRNKNKKKKDGDSDTPEDSGKRKKETQEIDFDDEN
>NZ_CP025117.1|WP_101018795.1|3120671_3120923_-|DUF4834-family-protein
MGLLRTILIIVLIYYGLKILSRLFAPALFKYASKKASERFGGAFNQQRQEPAKKEGEISIDKMPENKSSNKNVGEYVDYEEIE
>NZ_CP025117.1|WP_101018794.1|3118202_3120641_-|YfhO-family-protein
MQFSFKKILPHILVLVGFIICSIAYFSPVLQGKVIYQSDIVHYTGMAKQQKDFKANTGEETYWTNSAFGGMPTYQLGAKYPHNYIKKLDLALRFLPRPADYLFLYFLGFYILLLVLKVDWKLAGLGALAFGFSTYLIIILGVGHNSKAHAIAYMPLVLSGILLTFRGKYVWGFLLTAIAMGLELVANHYQMTYYLLLLVLVLGIAYLVDAYRKNVLPHFFKAVGVLSAAVLLAIGLNATNILATQDYVKESTRGKSELTIHPDGSKRENSNGLSKAYITEYSYGKLESFNLFIPRFLGGGSGEDVGENSAVYKYIISEGVPPADARAYTKSLPTYWGSQTIVEAPAYIGAVVIFLFVLGLFLVKGRLKWWLVGGTVLSLLLSYGKNLEFLTDLFINYVPLYNKFRAVSSIQVILELCIPVLAVFALVRLFNDVVKTEEKLNALKYTVLITGGLAILFLLLKSIGLIDFIGGIDGRIREANGQAFLDALREDRASLFTTDTLRTLLFVLLAAGAIYLFLKNTLNETKTIAILGVLIVIDLVSVDKQYVNNDDFVSKLTMERPYAPNKADLQILKDQSHYRVYDITSGGAKASYFHNALGGYHAAKPKRYQDLYEFYISKNNINVLSMLNAKYIIGEGEDRTPFPFVNNDANGNAWFVQNLQKVESPTEEILALDTLKNKITAVYSNGFKGKMNVPKTFKTDSLASIKAIDYKPNYIKYQSNNLKDGFAVFSEMYYGSGWNAYIDGQAKPHYKVDYALRGMEIPKGKHAIEFKFEPQVVKTGSTIALASSILLMLLVLGGLFFGLKGLIKNEKA
>NZ_CP025117.1|WP_101018793.1|3116881_3118168_-|glycosyltransferase
MDKKKVLIITYYWPPAGGPGVQRWLKFVKYLPDFNIEPIVYCPSNANYPIVDATLLDQVNPELIVLKQPIKEPYKLAQLFSEKSKTISKGIIAERQKQSLMERLMLFVRGNFFIPDARKNWVKPSVKHLATYIQDFKIETIITSGPPHSLHLIGMELQAQLGVKWIADFRDPWTTIGYHKQLKLTVKSKKKHKDLERKVLNNADQIIVTSPSTKVEFEQITKQPIQVITNGYDNEKVTVTALDKKFTLSHIGSLLSKRNPEVLWKVLHDLVEEDAEFASQFQLNLIGAVGVEVLQSIETHSLTNNLNTVGYVSHNEAVMFQKKSQLLLLIEIDSEDTKAIIPGKLFEYMVADRPIIAIGPQGADVASIIKTTNTGQFFDYQDYDNLKNVIKQHFEAFKVSNLKSYPIGLQQYSRQQLTKNLAELINPS
>NZ_CP025117.1|WP_101018792.1|3115416_3116868_-|oligosaccharide-flippase-family-protein
MGIVINQSIKNTIITYFGFGIGAINVIFLYTQFLTEEYFGLITFILSTASILMPFMAFGVHNTIVKFYSSFKSRQSQNSFLSVMLLLPLLLIIPLGVITHLAYDSIANWLSKENAIIKDYTWLIYVSAGAFAYFEVFYAWSKVQLQSVFGNFMSEVFHRGATTILLVCLYFGYVTVDQLIYGIVIVYVIRAFIMTLYAFSLRLPSFRFTKIPNLSSILKYSALIIIAGSVANIILEIDKFMLGQFEALNNVAYYGVAIYIATVIGVPARAMHQIANPLTAKFLNEGNTVELKTLYQKSSINLFIISGFIFLCIIINISKLYLLIPGNYSEGFIVVLVIGLAKLSDNLIGNNNAILFNSDYYRVVLMFGVLLAILTVVLNLIFIPIYGINGAAYASCITIFTYNIIKLTFVYKKFKMHPFTISTFKTLVLIGVCGLGLFFWEFPFHPIVDIALKTLLLSIVYGLSVYKFNLSEDISKLLNRFIP
>NZ_CP025117.1|WP_101018803.1|3130964_3131984_-|threonine-aldolase
MIIDLRSDTVTKPSADMMEAMMSAKVGDDVYKEDPTINALETKVAEMFGKSHALFFPSGTMANQTALKLHTNPGEQVICDKYAHIYNYEGGGASFNSGISCNLLDGHRGMFTAEQVIEAINPPEFYHSPLTTLVEIENTTNKGGGACWDFQEILKIKAVCKTHDLGFHLDGARLWNALVEKKETPKQYGEAFDTISVCLSKGLGCPIGSVLVGDEAIMKNAMRIRKIFGGGMRQGGFLAAAGLFALENNIERLTEDHKKARELAEVLNHSSFVKKVEPVETNIVIFELNKKYSEKQFLELLSAKNIKIIGMGSNKLRLVTHSNYVENQHDSVLSFLRNL
>NZ_CP025117.1|WP_157814164.1|3132085_3133196_+|peptide-chain-release-factor-2
MITSENIKDLNTRLTSLRQYLDIDAKLIALQNEEEQTFDPNFWSDSKSAELVMKSIREKKKWINDYNQSKILIEDLEVIYEFFKEEEATLTDVEDRYDKALSLIEDLEFRNMLSEEGDSLSAVLQITAGAGGTESCDWANMLMRMYLMYAEKNGFKVKELNFQEGDVTGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADIDIVTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRSRAMQMLKSQLYEIELQKQLAQREDIEAGKMKIEWGSQIRNYVLHPYKLIKDVRSGHETGNVDAVLDGTIEPFLKAYLMMMGQQQTDNQSL
>NZ_CP025117.1|WP_101018805.1|3133200_3133542_+|arsenate-reductase-(glutaredoxin)
MIKIYHNPRCSKSRQGLQFLEESNQEFEVIKYLDNPLSKEELTKLIVLLKIKPIELVRKNEAIWKENYKNKTLTDTQIIEALVTNPKLIERPIITNENKAVIGRPTELIKTIL
>NZ_CP025117.1|WP_101018806.1|3133590_3133968_+|arsenate-reductase
MIIIYHNPESSNSNACLEILETHKNDQELIKYQDKPLDKIKLTKIINLLNIKPIELIRTENKTWKDNFKHLEDDGHEFSDASLIDVMIEYQDIIERPIVINGEKAVIGEPAKRIFNIKPEHKASL
>NZ_CP025117.1|WP_101018807.1|3134057_3136478_+|TonB-dependent-receptor
MTKNIITFCLLVLAFNFSFAQNASSKTVTITGKILEKDTNAPLEYATVVFKNAKSPTDVSGGITDQNGNYSIEVKTGTYTVSFEYIGFKTEVIANKSVTKTEHFKTQYLALDFEALDEIEIVAEKTTVEIRLDKKIYNVGKDLTVRGGTVSDVLDNVPSVSVDVEGNVALRGNDNVRILINGKPSGLVGLNSTEALRQLPAESIEKVEVITSPSARYESEGTAGILNIILKRSKLEGLNGAITTNVGYNPSAGINGNINYRTGDLNIFSTTGYSYREAPGNSFSSTQYISDGDFLDETNDFDRIRKGLTTNLGLEWYVNDSASLTTSFLYRDGNNENNTTNLLKQYDSNRNLLSTTTRYDPETEDDKTVQYALNFQKNFSDSGHVLTFDFQYEENTENENSLVNVNSIATENVHTLEEQRQILLQTDYVLPIGKNSQFEAGYRGNFNTTATDFEVQFLDPDTNQFELSTDLSNVLNFREYLNAVYSQFGSKFGEFSFLLGLRLENTQLTIDQPTTGEHNKRNFTGLFPTVNLSYEISDRENVTLGYARRLRRPRGFFLNPFPSRSSVTNYFQGNPNLNPSYSGQFDLGYLKRFGKLTFNSSLYYSHATDAFNYVSFDTGETAFVNGEELPIIQRTPINLATEDRYGFEFTLTYSPSKKWRVNGNFNFFQNDTKGDTPNGLSLDNTNTSWFARLNNKYTLPGEIDWQTNLNYRGPSEDAQNKSEGIFTTTMALSKDLFGDRASLAFNVNDLFNSRKRQQTTTTPTFDAYSEFQWRERSFNLAFTYRFNQKKKRTQRGNFGGNEDFEG
>NZ_CP025117.1|WP_101018808.1|3136908_3138525_-|sensor-histidine-kinase
MNFNKKIKNIKYYFLVFIFLIVGAVLLQNLLNSNNALEQQKIEQKLKEEHTNALNSAKAGIQVYASLVSSIKSYTKNGAEFPNEYQLQKYLKDLLEDIDFNDSILISHVGTDHVFKYVITPNQIDPKNLKGVSSKTFISKQKIEELDRLMQSTDIKLFSPINLREGWAGFPFDFSARNNKNEILGYVAPVINVKYLLDYFYKKNDASTYVHKFVVNDSIDLTREVVYNNTRIYNEARDLEYYKGFDVKENDYIYSTIELFGLKLKIGSAYKVKPLVGKRSSNLAYFWYTLISILVFITLYQFLKNRALNTSLYDANNLVVLKNKALEGNLLKIQTLIKEVHHRIKNNMQMVSGILLMQEDEYDDENIKKALRDSQNRIQSMSLVHEKLYTNVTLKEVKTKEYVEQLLMYIEDTVKYKSMQIDKEIVIDQDLYFDGDTSSDLGLIINELVTNSFKYVFTKDQKNTLSIQIFKDQDFYKLVYKDYGKGLGDDFDFNNAKTLGMQLINILTEQLGGHLEYVKLPDSTFIISFKPLEKSFKE
>NZ_CP025117.1|WP_101018809.1|3138717_3140115_+|class-II-fumarate-hydratase
MEYRIEKDTMGEVKVPSDKLWGAQTERSRNNFKIGAVASMPLEVVYGFAYLKKAAAYTNCELGVLPIEKRDLIAQVCDEILKGQHDDQFPLVIWQTGSGTQSNMNVNEVIANRAHQLAGKVVGEGDKTIQPNDDVNKSQSSNDTFPTGMHIAAYTKIVKTTIPGVKQLRDTLKKKSETFKNVVKIGRTHLMDATPLTLGQEFSGYVSQLDHGIKALENTLPHLSEIALGGTAVGTGLNTPKGYSKRVAEYIAEFTGQPFITAPNKFEALAAHDAIVESHGALKQLAVSLNKIANDIRMMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQCEALTMVCAQVMGNDVAVTVGGTQGHYELNVFKPMMAANILQSAQLIGDACVSFDINCAAGIEPNYDVIKELLNNSLMLVTALNTKIGYYKAAEIANTAHKNGTTLKVEAVNLGYVTAEDYDEWVKPENMVGALK
>NZ_CP025117.1|WP_101018810.1|3140267_3140858_-|Crp/Fnr-family-transcriptional-regulator
MFEKGEKYYIEIYNYITSFYPMSKDSFDQMLSASSCKQLKAGDVLVDSGDVPSKIYMLNKGVMRSYVRLENGKEVTKSLFLPIIILASFDALLNQSPSNSIYESLTDCDIFVLEYFEFKALCESNIEILGFYAKFLETLICEKDKKHIELLTMGGKARYLNLRKMIPNIDNLIPQYQIAKYLSITPVQLSRIRSKL
>NZ_CP025117.1|WP_101018811.1|3141016_3142252_+|imidazolonepropionase
MSILITNIQELLQVREENTLKLSGHQMKELPTIKDAYLLIDNDTIVDFGSMIDISNIKADKIIDATGKLVLPTWCDSHTHIVYAGDRSQEFVDRINGLSYEDIANRGGGIINSAKTLQNTSEDELYNQSISRLKSVMKLGTGAIEIKSGYGLTPDAELKMLRVIKRIKKDFPLKVKATFLGAHALPLEYKDNKQGYLDQIINVMLPQIAKENLAHYIDIFCEKGYFDLNDTEQILKAGQQYNLTPKIHVNQFNAFGGIALGVKYNALSVDHLEELNSEDIEVLKGSDTIAVALPSCSYFLSIPYTPGRQIIDAGLPLALASDYNPGSTPSGNMNFVVSTACIKMRLTPEEAINAATINGAYAMGISNQYGSVTKGKKANLIITKPISSYNYLPYAFGDNHIDTVIINGEVI
>NZ_CP025117.1|WP_101018812.1|3142683_3143568_-|chromosome-partitioning-protein-ParA
MANNTASTGLKVALGIALALFIGTGIYTSSLYKDKKQNELELTQQKNDVLKDLNVMASKYDVALSENQVTNQNLVEARERIKGLIDSVQVSETNVKNLRRYYNKYNSLKREMDALLTENDRLKVENMHLATTLDSTNVRFEESRVFNDSLLIQNTALARVVENAAVLTTANLKGFGVIERNNGKLIPTERAGRSDKIRVCFTVAKNRLVQEGNKEFYIQVIDPSRKILGVNGQVTFEEQTLNYSIISKFNYENGNLDICEFVTNNTGSDFEKGRYQVNVFSANELVSSSEFTLK

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP025117_7	7.1|1345159|42|NZ_CP025117|CRISPRCasFinder	1345159-1345200	42	NZ_CP025117.1	973577-973618	1	0.976
NZ_CP025117_7	7.1|1345159|42|NZ_CP025117|CRISPRCasFinder	1345159-1345200	42	NZ_CP025117.1	1093360-1093401	1	0.976

1. spacer 7.1|1345159|42|NZ_CP025117|CRISPRCasFinder matches to position: 973577-973618, mismatch: 1, identity: 0.976

tgctaaatttatatatgaattaacttcctttataaacatagg	CRISPR spacer
tgctaaatttatatatgaattaacttcctttacaaacatagg	Protospacer
********************************.*********

2. spacer 7.1|1345159|42|NZ_CP025117|CRISPRCasFinder matches to position: 1093360-1093401, mismatch: 1, identity: 0.976

tgctaaatttatatatgaattaacttcctttataaacatagg	CRISPR spacer
tgctaaatttatatatgaattaacttcctttacaaacatagg	Protospacer
********************************.*********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	734050 : 744242	11	Escherichia_phage(25.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP025117|734050:744242|DBSCAN-SWA
TATGTATTCAGAAAAATATCACGACCAAGACTTGTTAAGTTTTTCCTTTTTAATAACGGGGGGAGCGGGTTTTATAGGTTCTAATCTTGTGGAATATTTGCTTAAGAACAAGGTTAAAAAAGTTGTTGTGCTAGATAATTTGGAGACAGGAAATCTACAAAATCTAATAGAATTTGAAAATTGTAGTAATTTTACTTTTATTAAAGGAGATATTACAAATTTAGAAACGTGCAAACACGTTATGAATAATGTGGATTATGTTTTGCATCAGGCGGCTTTGGGCTCTGTGCCAAGATCTATAGATAATCCAATTGCCTCTAATAATGCTAATATTAATGGTTTTTTAAACGTCTTGGTAGCAGCAAAAGAATCTAAAACAGTTAAAAGAGTGATTTATGCAGCATCGTCTAGTACTTATGGGGATAGTGAAAGTTTACCCAAGGTGGAAGATTGTATAGGTAAACCATTATCTCCTTATGCAGTAACAAAGTATGTCAATGAATTGTATGCAGATGTCTTTTATAAAACTTATGGTTTAGAAACAATAGGATTGAGATATTTTAATGTTTTTGGACCTAAACAAGATCCAAATGGGGCGTACGCGGCTGTAATCCCTAAGTTTATTAATCAAATATTAGAAAATCAAACGATCACCATTAATGGAGACGGTGAGCATTCTCGAGATTTTACTTTTGTTGAAAATGTCGTTCAAGCAAATATTAAAGCCGCTTTAACGACTAATGTAAAAGCTGTAAATGAAGTTTATAATATTGGATGTGGTGATCAGATTAGTTTGAATCAACTGACTGATACGATTATTGAGAACTTAAAACAGGTAAATTTTGATAGTGTTAATCAAATCCAATATAAAGACGCTAGACTTGGTGATGTTAAACACTCGTTAGCTGATATTTCAAAAGCTAAGAATATTTTGAATTACAATCCGAGATACAAATTTATAGATGGGATAACTAGAACCTCTTTATGGTTTTATAATCAAAAAAATAAATGAAAGATAGTATAGTAATAGTTGGTCTGGGTTATGTAGGTTTACCTTTGGCTATAGAGTTTTCTAGAGAATTTGAAGTTATTGGTTTTGATATAAATAATTGCCGAATACTAGAGCTTCAAGATAATATAGATCGCACTCTGGAAGTGTCTTCGGAAGTTTTAAAGGCATCAAAAAAATTAGTCTTTACTAATAAAACAGAAGACATTATAAACGCTAATATATACATAGTAACGGTTCCAACGCCGATTACTAAGCATAAATCTCCGGATTTGCAACCATTGATTAAAGCTAGTAAAACTATAGGTAAGGTCTTATCAAAAGGTGATATTGTTATTTATGAATCTACCGTTTTTCCCGGCTGTACCGAGGAAGTCTGTGCTCCTATTCTAGAACAAGAAAGTGGACTCAAATTTAATCAGGATTTTTTCTGTGGTTATTCACCAGAGCGTATTAATCCAGGTGATAAAATTCATACCATTAGTAAAATAATAAAAGTTACTTCAGGTAGTACTCCAGAGATAGCTACAAAAGTAGATGAGCTTTATAAAACTATAATTACCGCGGGTACACATAAGACAAGTTCTATAAAAGTAGCAGAAGCCGCTAAAGTTATAGAAAATACCCAGCGGGATTTAAATATTGCATTTATTAATGAGCTGTCTATTATTTTTGATAAATTAAGTATTGATACAACGCAAGTGTTAGCTGCAGCAGGAACAAAATGGAATTTCTTGCCATTTACACCAGGCTTAGTGGGCGGGCATTGTATAGGTGTAGATCCTTATTATTTAACCCATAAGGCAGAATCTGTTGGATATTACCCCGAGGTAATATTAGCGGGACGAAGAATAAATTCTAATATGGGGATTTTTGTGGCTAATAAATTGATAAAATTATTAGCTTTAAATGGAAACGAAATAAAAAATGCAGAAGTACTTGTTATGGGAATAACTTTTAAAGAAAATTGTCCAGATATTAGAAATACAGGTGTAATAAATGTTGTTAATGAACTGACTGAATTTGGATTAAAAGTAGACGTCTATGATTCTTTTGCAAATAAAGAAGAGGTTAAAAAAGAATACAATATAGATTTAATTCCATCTATTACTGCTAAGTATAAAGCCATCGTATTGGCAGTAAAGCATGATAGTTTTAAAGCTCTAGATTGGGATAAAATAGTATCTAAAGATACTATAGTATTTGATTTGAAAGGATTTTTACCTGAAAGATTAGTGTCTGCACGTTTGTAATACCTAATAGAAACTTAACCAACGTCAATTAACTGTATCTATTAAAATCAACGATAAAAAAACAACTTTAATCGGTAAAATACTTATTTAGTGAATACTAAAACACAAAAAGCTTTATAAAAAGACTATTTTTGTTAATAGTTGTTTAGTATAGGCTGCAATTATCTTTATTGTTATTTTAAGGGTAATTAGGTAGTGTAAAAGGCTTAATCGAAATAAAATAGATTTAATTTAAAACAATATATAAAATATGACTAATCGTACCTTTTTAGTGACAGGAGGAGCAGGATTTATAGGGTCCCATGTCGTTAGATTATTTGTAAAAAAATATCCAAACTATAAAATAGTTAATTTAGATGCTTTAACATATGCAGGTAATTTAGAAAATCTAACAGATATAGAGGATGCTCCAAATTATACATTCATAAAAGGTGATATTACAAACGAGGACTTTATTAATGCACTTTTCAAAGAGCATAAATTTGATAATGTAATACATTTAGCTGCAGAATCTCATGTAGATAGATCGATTAAAGATCCATTAGCGTTTGTAAGAACAAATGTTATTGGGACAATGATTTTGTTAAATGCGTTTAAAGCACTTTGGAAGGATAATTTCAATGATAAATTATTCTATCATATCAGTACAGATGAAGTTTATGGTTCTCTAGGAGAAATGGGTTTGTTTGAAGAAACAACAGCTTACGACCCAAACTCACCATATTCAGCTTCAAAAGCAAGTTCAGATCACTTTGTAAGAGCATATGGAGAAACTTATGGAATGCCGTATGTTATAACAAATTGTTCTAATAATTATGGTCAAAACCAGTTCCCGGAAAAATTGATTCCTTTATTTATTAATAATATAATAAATAATAAGCCTTTGCCGGTTTATGGAGACGGTAACTATACTAGAGACTGGTTATATGTAATAGATCATGCTATTGCTATCGATTTAGTGTTTCATAAAGGTAAGCAAGGAGATACTTATAATATTGGAGGTTTTAACGAGTGGAAAAATATTGACTTAGTAAAACTACTTTGTCAGCAAATGGATGTTGCATTAGGCAGAGATAAAGGATCTTCTGAAAAATTAATAACGTATGTTAAAGATCGTCCAGGACATGATTTAAGATATGCTATTGATGCCACAAAAATCAATAAAGAGCTAGGTTGGAAACCTTCTGTAACCTTTGAGCAAGGCTTAAAAATTACTATAGATTGGTATTTAAATAATGAAAATTGGTTAAATAGTGTTACAAGTGGATCATACCAAGCGTATTACAAAAAACAATATAGCTAATAATTAATACAGAAACATGAAACTTCCATAACAAGAGTTCGATACTTAAGAGAATGACTATTATGGAAGCTACAAGTGACCAATAAAAAACAAATAAGTTCGACACATGAAAGGAATAATACTAGCAGGAGGTTCTGGTACAAGACTTCACCCATTGACACTCGCCGTAAGTAAGCAATTAATGCCTATTTATGATAAACCAATGATCTATTACCCACTATCCACTTTAATGTGGTCTGGAATTAAAGATATTCTTATCATATCTACACCTCACGATTTACCATTATTCGAACAACTTTTAGGTGACGGAAAAAAGTTTGGATGTAATTTTGAATACGCAGTTCAAGAAGAACCAAATGGGTTAGCTGAGGCTTTTGTTATTGGAGCAGATTTTATTGGTGATGATAAAGTTGCGCTTATTTTAGGAGATAATATATTTTATGGATCTGGATTAGCAGAATTACTGCAAGCTAATAACGAGCCAGAAGGAGGTATTATTTATGCATACCATGTGCATGATCCAGAGCGTTACGGTGTTGCAGAATTTGATAAAGAAGGTAAGGTGATTTCTATTGAAGAAAAACCCGAAAAACCAAAGTCAAATTACGCCGTTCCTGGGATTTATTTTTACGATAATTCTGTTGTAGAAATCGCAAAAAACATAACACCTAGTCATAGAGGAGAATTAGAAATTACAGATGTAAATAAAGAGTATTTAAAGCAAGGTAAACTAAAAGTTAGCGTATTAGATAAAGGAACAGCGTGGTTAGACACCGGGACCTTTAATTCGCTTATGCAAGCATCACAGTTTGTTCAAGTAATTGAAGAAAGACAAGGTCTTAAAATTGGAGCTATTGAAGAGGTCGCTTATAGTATGGGTTATATTAATAAGGCCGAATTTAACACATTAATTCAACCCTTAATCAAAAGTGGTTATGGTAAACATTTGTTAAGCATTTTAGAAAAATAATATGAAGGCAACAGAAACCAAATTAGAAGGCTGTTTTGTTTTAGAACCAACTATTTTTGAAGATAAAAGAGGTTATTTTTTCGAAAGTTTTAATCAAGAAAAATTTAATTCTTTAATTAATAAACAGGTAGATTTTGTTCAGGACAATGAGTCTTTTTCTTCCAAAGGAGTTTTAAGAGGGTTACATTACCAAGTTGGTGAATACGCACAAGCAAAACTAGTACGAGTAATTAAAGGGAAAGTTCTTGACGTAGCAGTAGATGTAAGAGCTAATTCGAAAACTTTTGGACAACATGTAGCTGTTGAATTATCTGAAGATAACAAGAAGCAACTATTTGTACCAAGAGGATTTGCACATGGTTTTATTGTGTTAAGTGACACAGCTATTTTTTCATATAAATGTGATAACCTTTACAACAAAGCTTCAGAAGGAGGTATAATATATAATGACCCAAAACTAAATATAGATTGGCAATTGCCTGAAAAAAAATTACTTGTATCAGAAAAAGATGTGATTTTACCAACTTTAGACAAAGCTAGACTATGATTAATATCTTGGTAACAGGAGGAAACGGACAATTAGCAACGTGTATAAAAGATATAGAGTCTAATCATTCTAATTTAAACTTTATATACGCAAATTCAGAACAATTAAATATTGCAGATTTTAGTGCTGTACAACAGTTTTTTAATGACCAATCTATTCATTATTGCATAAATTGTGCAGCATATACAGCAGTAGATAAAGCCGAAAGTAATCAAGAAAAGGCAAAAAAGGTAAATGTACTCGGCTCAAAAAACCTTGCTATAGTTTGTGCAGAAAAAAAAGCGACTCTAATTCAAGTATCTACAGACTTTGTTTTTAATGGAGAAAAATCTTTTGCATATACAGAAACAGACGCAACAAATCCAACAGGAGTTTATGGTGCAACAAAATTGGAAGGAGAACTCGAAGTTGCTAAAAATATAGAACAACATTTTATAATAAGAACCTCTTGGCTATATTCTGAAAATGGTAATAACTTCATGAAAACCATGATAAATTTATCTCAAGACAGGGACCTATTAAATATCGTTGCAGATCAAATAGGAACACCGACCTATGCAACAGATTTAGCGCAAGCTATTTTAAAAATCATAACAACAAATAACACACAATACGGCGTCTACCATTATAGTAATGAAGGGGTTGCAAGTTGGTATGATTTTGCAAAAGCTATTTTTGAGGAAAGTAACATTTATATTAAAGTATTACCAATACAATCGGAAGCATATCCAACTCCAGCTAAAAGACCGCATTTTAGCGTGTTAGATAAAACGAAAATAAAAACGAATCTTCAAATTGAAATTCCATATTGGAGAGACAGTTTAAAAATAGCATTAGCAAATAGTTATGAATAAAGATTTAGAAGTAGCTATAAAAGCTAGTTTAGAGGCAGGAAAAGTGATCATGGAAGTATATGATACTCCTTTTGATGTAGAAATAAAAGACGATAAATCTCCTTTAACCGAAGCAGACAAAAAAGCGAATGATATTATAAACTCTTATCTAGTAAATACGGAGTTTCCAATTATTAGCGAAGAGAATAAACAAACAGATTATGCTACAAGAAAAAAATGGACTACTTGCTGGGTGGTAGATCCGGTAGATGGCACAAAAGAATTTATAAAACGTAACGGAGAGTTTACCGTTAACATTGCATTAGTAACAAACGGTAAACCACAATTAGGCGTTATTTATGTACCAGCAACAAAAACAATTTATGTTGCAGATGTAACTAAAGAAGATGCTTTTAAAGCAGGCTTAGATTCTCATGATGCTTCGCTAGAAGAAGTAATGCAAGCTGCTGTAAAACTACAACCAAAATCATCAGGATCAAACCCTGTGCAAGTTGTTGGTAGTCGTTCACATATGAGTCAAGAAACATTAGATTTTGTAGAGTCTATTAAAAAAGAAGGAAAAGAAGTGGAAGTAGTTTCCAAAGGAAGTTCCTTAAAATTCTGTTTGGTAGCGGAAGGAAACGCTGATGTATATCCTAGATTTGCACCTACTATGGAATGGGATACTGCCGCAGGACAAGCAATTTGTAATGCTGTTGGTATTGATGTTATTTCACAAGAAACCAACCAATCTCTTTTATATAATAAAGAAAATCTATTAAACCCCTGGTTTTTAGTAAGTAAGTAATGGCAGATATATCTTACAAAAGACATATAGCCAAAACGATTACCTGGAGGATTATAGGTACTATAGATACTATTATTCTATCTTGGATTATCTCTGGAGACCCTTTTACAGGCCTTAAAATAGGTTTTGCTGAGGTGATAACTAAAATGACTTTATACTACCTTCATGAGCGTGTTTGGTTTAAAATAAACCTATCTAAAGAAGGAGAAGTTTTAGAAAGCAGAAAACGCCACATAGCAAAAACAGTAACCTGGCGTGTTATAGGTACTATGGATACTATGTTGCTAGCTTGGCTAATTTCAGGCGATCCGTTAATGGGATTAAAAATAGGTTTTGCAGAAGTCATAACTAAAATGCTATTATATTATTTGCACGAAAGAGCATGGTATAAAATAAACTTTGGACTAACTAAAAGAAATAAATCATAAAACTTATAGTTTATTATAAGTGTATTAAAAACTAGACAGGTCAAATGAAAGAAAATATTATTCCTCACAATTATCAAGTCTCAAAAGTAGATCGGCAGAAAAAAAATAAACACAAGTCTTTCTTAATGTGGTTTACTGGACTTTCCGGATCAGGAAAATCTACCATAGCAAACGTAGTCGAACAAGAATTGTTTAAATTAGGAATTAAAACATATACGCTTGACGGTGATAATATAAGAAGGGGGATAAATAAAGACTTAACATTTTCACCAGAGGACAGAACTGAAAATATTAGACGTTTGGCAGAAATAGCTAATTTAATGCTTGATGCAGGTTTGGTAACATTAGCAGCATTTGTATCTCCTTACAAAAAAGATAGAGAGAATATTAAAAATACCGTTAAAGGTGTTAACTTTGTTGAAGTTTACATTAATACTAGTATTGAAGAGTGTGAACGTAGAGACGTTAAAGGTTTATACAAAAAAGCGAGAGCTGGAGAAATAAAAAACATGACAGGGATATCTGCTCCTTATGAGGAACCTGAAAACCCTGATATAGAAATTAAAACCGAAGAAAAAACGGTTGAAGAAGCAGTTCAGGAAATCTTGAACTACATAAAACCTAAATTAAACCTATAGAAATGAGTAAATATTACTTAAATTATTTAGATGAATTAGAAAGTGAAGCAATCTTCGTTTTGCGAGAAGTTTGGGCACAATTTGAGAATCCAGTAATCATGTTTTCTGGAGGAAAGGATTCTATTTTAATAACGCATTTGGCTAGAAAAGCATTTTATCCAGCTAAAATACCATTTCCATTAATGCACGTAGATACAGGACATAACTTTCCTGAAACGATTCAATTTAGAGATGATATCATTAAAGAATTGGGTGTAGAGCTTATTGTAGGTTCTGTTCAAGATTCTATTGATGAAGGTCGTGTGGCTGAAGAAAAAGGTAAAAACGCCACTCGTAATGCATTACAAATAACAACACTTTTAGATGCTATTGAAGCAAATAAAGTAGATTGTGCCATTGGTGGAGGAAGAAGAGATGAAGAAAAAGCAAGAGCAAAAGAACGTTTCTTTTCACATAGAGATGATTTTGGGCAATGGGATCCTAAAAACCAAAGACCAGAATTATGGAATATCTTCAATGGTAAACATTTTGAAGGGGAACATTTTAGAGCATTCCCTATTAGTAACTGGACAGAAATGGATGTTTGGAACTATATAAAAAGAGAAAACATAGCAATACCTTCCTTATATTTTGCGCATGAGCGTGAAGTAGTACGTAGACAAGGAACTTGGATTCCTAATTCCGAGTTTTTAATACTAGAAGAGCATGAAGAGGTAGTAACTAAAAAAATACGTTTTAGAACCTTAGGAGATATCACAATTACCGGAGGAGATGAATCGGAAGCAGATACTTTAGAGAAAATTGCTACGGAAGTTGCAGGAATGCGAAATACAGAAAGAGGAAACAGAAGTGATGATAAGCGTTCTGAATCTGCGATGGAAGACAGAAAACGTCAAGGATACTTTTAATAGACACCCCGATTTACTAATTACTTATGCTGTTTAATTCATTAGACTTTGCTTTATTTTTTCCTGTAGTTTTTGTTCTGTATTGGCTTGTTGCTAAAAATAGAAACTATAGAAATATACTTTTACTTGTTTCTAGTTACGTGTTTTACGGCTGGTGGGATTGGAGGTTTCTACTATTAATAGCTTTTAGTTCGTTGGTTGATTTTTTAATTGGTCAAAAAATTTATAATACGGATAACAAGAAAAAGCAAAAGCAATATTTGCTAGTCAGTCTTGTTATTAATTTAGGTTTCTTAGTCTATTTTAAATACACGAACTTTTTTATAGACACTTTTGTAGAATCCTTTAGGTTATTTGGTACTGAGTTAGAAGTTTCTACGCTAAATATCATTTTACCAGTTGGAATTAGCTTTTACACCTTTCAAACGCTTAGTTACACGATAGATATTTACAGGAAACAACTAGAGCCTACTAAAGATTGGCTTGCTTTTTTCTCGTTTGTGTCTTTTTTTCCGCAGCTAGTTGCAGGACCTATTGAGAGAGCATCGCATTTATTACCTCAATTTTATAGAACTTACAAGTTTAATTATAATCAAGTGAAATCTGGATTATTATTAATGGCTTTTGGGTTGTTTAAAAAGATGGTTATAGCAGATCGAGCCGCTCTTTATGTGAATGAAGTTTATAATAATCCAGGGAATTACGAAGGTGTAGAAACCATCATAGCTACTGTTTTGTTTGCTTTTCAAATTTATTGTGATTTCTCAGGGTATTCTGATATTGCCATTGGAGCAGCAAGAACAATGGGCTTTGACTTAATGAGAAACTTTGATAGCCCTTATTTTTCTAAATCTATTACAGAGTTCTGGAGACGCTGGCATATATCTTTATCCACATGGTTTAGAGATTATGTATACATCCCATTAGGAGGAAGCAGAAAGGGTAAATATAGAACTTATGCTAACTTATTTATTATCTTTTTAGTTAGCGGGTTATGGCATGGAGCCGCCATGACTTTTGTGATTTGGGGAGTAATTCATGGTGTAATAATTGTCTTTGAGAAAGCGACTTATAAAATGCGAACTAAGATATGCAATACCTTAGGTTTGTCTGCTAATACCTTTGCAAATAAATTGTTTTTTGTAATCATTACCTTTGTCATTGTAGATTTTGCATGGTTGTTTTTTAGAGCAAATTCATTTGCAGACGCATCTATAATTACTCAAAATATATTTAACAACAATTTTTATGAATTATTTGGTACTGACTTATATCTTATTGGTTTAAAGGACAATGAGTTTTTAGTATTAATGGTAAGTATTGTTGTTTTGATTTGTTTTGAATTAAATCACAAAAAAGGGAATATGGTTATTTGGTTAGGTAAGCAATCTACTATTTTACGTTGGTCAACATATCTTGCAATAGTTGTTGTTATTACAATTTTTGGTGTATATGGAGACGATAGTGTTTCAGAATTTCTTTATTTTCAATTTTAG

Protein sequences of DBSCAN-SWA_1

>NZ_CP025117|734050:744242|740771_741200_+|WP_101015807.1|DBSCAN-SWA
MADISYKRHIAKTITWRIIGTIDTIILSWIISGDPFTGLKIGFAEVITKMTLYYLHERVWFKINLSKEGEVLESRKRHIAKTVTWRVIGTMDTMLLAWLISGDPLMGLKIGFAEVITKMLLYYLHERAWYKINFGLTKRNKS
>NZ_CP025117|734050:744242|738585_739131_+|WP_101015804.1|DBSCAN-SWA
MKATETKLEGCFVLEPTIFEDKRGYFFESFNQEKFNSLINKQVDFVQDNESFSSKGVLRGLHYQVGEYAQAKLVRVIKGKVLDVAVDVRANSKTFGQHVAVELSEDNKKQLFVPRGFAHGFIVLSDTAIFSYKCDNLYNKASEGGIIYNDPKLNIDWQLPEKKLLVSEKDVILPTLDKARL
>NZ_CP025117|734050:744242|735057_736311_+|WP_101015801.1|DBSCAN-SWA
MKDSIVIVGLGYVGLPLAIEFSREFEVIGFDINNCRILELQDNIDRTLEVSSEVLKASKKLVFTNKTEDIINANIYIVTVPTPITKHKSPDLQPLIKASKTIGKVLSKGDIVIYESTVFPGCTEEVCAPILEQESGLKFNQDFFCGYSPERINPGDKIHTISKIIKVTSGSTPEIATKVDELYKTIITAGTHKTSSIKVAEAAKVIENTQRDLNIAFINELSIIFDKLSIDTTQVLAAAGTKWNFLPFTPGLVGGHCIGVDPYYLTHKAESVGYYPEVILAGRRINSNMGIFVANKLIKLLALNGNEIKNAEVLVMGITFKENCPDIRNTGVINVVNELTEFGLKVDVYDSFANKEEVKKEYNIDLIPSITAKYKAIVLAVKHDSFKALDWDKIVSKDTIVFDLKGFLPERLVSARL
>NZ_CP025117|734050:744242|739977_740772_+|WP_101015806.1|DBSCAN-SWA
MNKDLEVAIKASLEAGKVIMEVYDTPFDVEIKDDKSPLTEADKKANDIINSYLVNTEFPIISEENKQTDYATRKKWTTCWVVDPVDGTKEFIKRNGEFTVNIALVTNGKPQLGVIYVPATKTIYVADVTKEDAFKAGLDSHDASLEEVMQAAVKLQPKSSGSNPVQVVGSRSHMSQETLDFVESIKKEGKEVEVVSKGSSLKFCLVAEGNADVYPRFAPTMEWDTAAGQAICNAVGIDVISQETNQSLLYNKENLLNPWFLVSK
>NZ_CP025117|734050:744242|741840_742746_+|WP_055444109.1|DBSCAN-SWA
MSKYYLNYLDELESEAIFVLREVWAQFENPVIMFSGGKDSILITHLARKAFYPAKIPFPLMHVDTGHNFPETIQFRDDIIKELGVELIVGSVQDSIDEGRVAEEKGKNATRNALQITTLLDAIEANKVDCAIGGGRRDEEKARAKERFFSHRDDFGQWDPKNQRPELWNIFNGKHFEGEHFRAFPISNWTEMDVWNYIKRENIAIPSLYFAHEREVVRRQGTWIPNSEFLILEEHEEVVTKKIRFRTLGDITITGGDESEADTLEKIATEVAGMRNTERGNRSDDKRSESAMEDRKRQGYF
>NZ_CP025117|734050:744242|734050_735061_+|WP_101015800.1|DBSCAN-SWA
MYSEKYHDQDLLSFSFLITGGAGFIGSNLVEYLLKNKVKKVVVLDNLETGNLQNLIEFENCSNFTFIKGDITNLETCKHVMNNVDYVLHQAALGSVPRSIDNPIASNNANINGFLNVLVAAKESKTVKRVIYAASSSTYGDSESLPKVEDCIGKPLSPYAVTKYVNELYADVFYKTYGLETIGLRYFNVFGPKQDPNGAYAAVIPKFINQILENQTITINGDGEHSRDFTFVENVVQANIKAALTTNVKAVNEVYNIGCGDQISLNQLTDTIIENLKQVNFDSVNQIQYKDARLGDVKHSLADISKAKNILNYNPRYKFIDGITRTSLWFYNQKNK
>NZ_CP025117|734050:744242|736561_737614_+|WP_101015802.1|DBSCAN-SWA
MTNRTFLVTGGAGFIGSHVVRLFVKKYPNYKIVNLDALTYAGNLENLTDIEDAPNYTFIKGDITNEDFINALFKEHKFDNVIHLAAESHVDRSIKDPLAFVRTNVIGTMILLNAFKALWKDNFNDKLFYHISTDEVYGSLGEMGLFEETTAYDPNSPYSASKASSDHFVRAYGETYGMPYVITNCSNNYGQNQFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLYVIDHAIAIDLVFHKGKQGDTYNIGGFNEWKNIDLVKLLCQQMDVALGRDKGSSEKLITYVKDRPGHDLRYAIDATKINKELGWKPSVTFEQGLKITIDWYLNNENWLNSVTSGSYQAYYKKQYS
>NZ_CP025117|734050:744242|739127_739985_+|WP_101015805.1|DBSCAN-SWA
MINILVTGGNGQLATCIKDIESNHSNLNFIYANSEQLNIADFSAVQQFFNDQSIHYCINCAAYTAVDKAESNQEKAKKVNVLGSKNLAIVCAEKKATLIQVSTDFVFNGEKSFAYTETDATNPTGVYGATKLEGELEVAKNIEQHFIIRTSWLYSENGNNFMKTMINLSQDRDLLNIVADQIGTPTYATDLAQAILKIITTNNTQYGVYHYSNEGVASWYDFAKAIFEESNIYIKVLPIQSEAYPTPAKRPHFSVLDKTKIKTNLQIEIPYWRDSLKIALANSYE
>NZ_CP025117|734050:744242|737720_738584_+|WP_101015803.1|DBSCAN-SWA
MKGIILAGGSGTRLHPLTLAVSKQLMPIYDKPMIYYPLSTLMWSGIKDILIISTPHDLPLFEQLLGDGKKFGCNFEYAVQEEPNGLAEAFVIGADFIGDDKVALILGDNIFYGSGLAELLQANNEPEGGIIYAYHVHDPERYGVAEFDKEGKVISIEEKPEKPKSNYAVPGIYFYDNSVVEIAKNITPSHRGELEITDVNKEYLKQGKLKVSVLDKGTAWLDTGTFNSLMQASQFVQVIEERQGLKIGAIEEVAYSMGYINKAEFNTLIQPLIKSGYGKHLLSILEK
>NZ_CP025117|734050:744242|741244_741838_+|WP_101015808.1|DBSCAN-SWA
MKENIIPHNYQVSKVDRQKKNKHKSFLMWFTGLSGSGKSTIANVVEQELFKLGIKTYTLDGDNIRRGINKDLTFSPEDRTENIRRLAEIANLMLDAGLVTLAAFVSPYKKDRENIKNTVKGVNFVEVYINTSIEECERRDVKGLYKKARAGEIKNMTGISAPYEEPENPDIEIKTEEKTVEEAVQEILNYIKPKLNL
>NZ_CP025117|734050:744242|742772_744242_+|WP_101015809.1|DBSCAN-SWA
MLFNSLDFALFFPVVFVLYWLVAKNRNYRNILLLVSSYVFYGWWDWRFLLLIAFSSLVDFLIGQKIYNTDNKKKQKQYLLVSLVINLGFLVYFKYTNFFIDTFVESFRLFGTELEVSTLNIILPVGISFYTFQTLSYTIDIYRKQLEPTKDWLAFFSFVSFFPQLVAGPIERASHLLPQFYRTYKFNYNQVKSGLLLMAFGLFKKMVIADRAALYVNEVYNNPGNYEGVETIIATVLFAFQIYCDFSGYSDIAIGAARTMGFDLMRNFDSPYFSKSITEFWRRWHISLSTWFRDYVYIPLGGSRKGKYRTYANLFIIFLVSGLWHGAAMTFVIWGVIHGVIIVFEKATYKMRTKICNTLGLSANTFANKLFFVIITFVIVDFAWLFFRANSFADASIITQNIFNNNFYELFGTDLYLIGLKDNEFLVLMVSIVVLICFELNHKKGNMVIWLGKQSTILRWSTYLAIVVVITIFGVYGDDSVSEFLYFQF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101015800.1|734050_735061_+	SDR family oxidoreductase	A0A2K9L4U8	Tupanvirus	7.9e-88	52.2
WP_101015801.1|735057_736311_+	nucleotide sugar dehydrogenase	M1H3J6	Paramecium_bursaria_Chlorella_virus	8.5e-23	27.5
WP_101015802.1|736561_737614_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	3.5e-86	51.1
WP_101015803.1|737720_738584_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	8.3e-94	58.0
WP_101015804.1|738585_739131_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	7.4e-40	49.2
WP_101015805.1|739127_739985_+	dTDP-4-dehydrorhamnose reductase	A0A1D8EQE2	Escherichia_phage	3.4e-39	40.2
WP_101015806.1|739977_740772_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_101015807.1|740771_741200_+	DUF2061 domain-containing protein	NA	NA	NA	NA
WP_101015808.1|741244_741838_+	adenylyl-sulfate kinase	A0A2P1ELS9	Moumouvirus	4.6e-27	40.4
WP_055444109.1|741840_742746_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_101015809.1|742772_744242_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	4.7e-65	33.7