CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021388	Bifidobacterium breve strain NRBB11 chromosome, complete genome	5 crisprs	cas3,c2c9_V-U4,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	1	14	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021388_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021388_1

154339-154675

Orphan

Consensus_repeat	Method
TACTGGTGGTTTTGCCCCGCTGAGG	CRISPRCasFinder

6 spacers

The CRISPR arrays of NZ_CP021388_1

>merge|NZ_CP021388|1|154339-154675|CRISPRCasFinder
TACTGGTGGTTTTGCTCCGCTGGTGCGTTGTTAGCGGTGCTTTTTTACCAGCTCTTGGCGGGATAGCTCCGTTGAGGAGCTGTCAGCGGTGCAAAACTTCCAGTTATTGGTAGTCTGGCCTCATTGAGTATTAGTAAGCGGTGTAGAGCTGCCAGCTACTGGTGGTTTTGCCCCGCTGAGGGGTTGTGGATGGTGCGGAGCCCCCATGTACTGGTGGTTTTGCCCCGCTGAGGAGCTGTCAGTGGCACGAAGTTTCCAGTTACTGGTGGTTTTGCGTCGTTGAGGGGTGCTGAGCAACGCTTTTATGCCAATTGCTGGCGATTTTGCGCCGCACAGG

>NZ_CP021388|1|1|154339-154675|CRISPRCasFinder
TACTGGTGGTTTTGCTCCGCTGGTG	CGTTGTTAGCGGTGCTTTTTTACCAGC
TCTTGGCGGGATAGCTCCGTTGAGG	AGCTGTCAGCGGTGCAAAACTTCCAGT
TATTGGTAGTCTGGCCTCATTGAGT	ATTAGTAAGCGGTGTAGAGCTGCCAGC
TACTGGTGGTTTTGCCCCGCTGAGG	GGTTGTGGATGGTGCGGAGCCCCCATG
TACTGGTGGTTTTGCCCCGCTGAGG	AGCTGTCAGTGGCACGAAGTTTCCAGT
TACTGGTGGTTTTGCGTCGTTGAGG	GGTGCTGAGCAACGCTTTTATGCCAAT
TGCTGGCGATTTTGCGCCGCACAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021388.1\|WP_106628618.1\|161707_163522_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_CP021388.1\|WP_106628616.1\|147084_147480_+\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP021388.1\|WP_106628060.1\|160472_161501_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP021388.1\|WP_106628955.1\|165733_170146_+\|choice-of-anchor-A-family-protein	unknown	unknown	gnl\|CDD\|380024
NZ_CP021388.1\|WP_025299465.1\|142963_144250_+\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
NZ_CP021388.1\|WP_003827964.1\|149622_151149_+\|sucrose-phosphorylase	unknown	unknown	gnl\|CDD\|237528
NZ_CP021388.1\|WP_003832420.1\|163793_164825_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP021388.1\|WP_106628617.1\|153057_154110_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_CP021388.1\|WP_003827956.1\|141728_142796_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236406
NZ_CP021388.1\|WP_106628614.1\|144273_145857_+\|ClC-family-H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238504
NZ_CP021388.1\|WP_003832411.1\|158334_159387_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP021388.1\|WP_003827965.1\|151353_152988_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP021388.1\|WP_003827967.1\|155097_156465_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP021388.1\|WP_106628619.1\|170250_172089_+\|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl\|CDD\|374637
NZ_CP021388.1\|WP_003827968.1\|156854_157907_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP021388.1\|WP_077420581.1\|164934_165132_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	unknown
NZ_CP021388.1\|WP_014483280.1\|148110_149196_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_CP021388.1\|WP_025341498.1\|140730_141666_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP021388.1\|WP_065458174.1\|172344_173304_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
NZ_CP021388.1\|WP_106628615.1\|146044_147085_+\|chromosome-condensation-protein-CrcB	unknown	unknown	gnl\|CDD\|223317

Protein	Function_ID	Function_description	E-value
NZ_CP021388.1\|WP_106628618.1\|161707_163522_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP021388.1\|WP_106628616.1\|147084_147480_+\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	1.25396e-21
NZ_CP021388.1\|WP_106628060.1\|160472_161501_-\|hypothetical-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	0.00518785
NZ_CP021388.1\|WP_106628955.1\|165733_170146_+\|choice-of-anchor-A-family-protein	gnl\|CDD\|380024	pfam17802, SpaA, Prealbumin-like fold domain. This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.	6.6345e-11
NZ_CP021388.1\|WP_025299465.1\|142963_144250_+\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_CP021388.1\|WP_003827964.1\|149622_151149_+\|sucrose-phosphorylase	gnl\|CDD\|237528	PRK13840, PRK13840, sucrose phosphorylase; Provisional.	0
NZ_CP021388.1\|WP_003832420.1\|163793_164825_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.72239e-78
NZ_CP021388.1\|WP_106628617.1\|153057_154110_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	9.22211e-77
NZ_CP021388.1\|WP_003827956.1\|141728_142796_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|236406	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP021388.1\|WP_106628614.1\|144273_145857_+\|ClC-family-H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	3.961e-154
NZ_CP021388.1\|WP_003832411.1\|158334_159387_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP021388.1\|WP_003827965.1\|151353_152988_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.27857e-14
NZ_CP021388.1\|WP_003827967.1\|155097_156465_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18599e-175
NZ_CP021388.1\|WP_106628619.1\|170250_172089_+\|isopeptide-forming-domain-containing-fimbrial-protein	gnl\|CDD\|374637	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain. GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilized by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.	5.52026e-11
NZ_CP021388.1\|WP_003827968.1\|156854_157907_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP021388.1\|WP_014483280.1\|148110_149196_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.57412e-79
NZ_CP021388.1\|WP_025341498.1\|140730_141666_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.28172e-19
NZ_CP021388.1\|WP_065458174.1\|172344_173304_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	6.05308e-86
NZ_CP021388.1\|WP_106628615.1\|146044_147085_+\|chromosome-condensation-protein-CrcB	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	7.37689e-23

>NZ_CP021388.1|WP_106628617.1|153057_154110_+|LacI-family-transcriptional-regulator
MVGMRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTNTIGVIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDGIVMAAHTEHPGGYWTSIHRPIVAFDRTLGEGVPAVRSDHEQGGRLIARQLIDSGARHVVLVGGPRSQFAEATTFPTIRYHLTVERMLADAGIACDYVEAGIVADICAHEATARAIFERYSDVDAIVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAGMRLTAVRQDFPAVAAALASRMDSQIAADNGTTSAAAAEGGNAVAANGGQSTSEDIISVTLIPGETAR
>NZ_CP021388.1|WP_003827965.1|151353_152988_+|MFS-transporter
MLEPYVRPGIDDRPDLDKALSPEDKDAVARLAIKDRRRPPEASADQPEAQAVRLAAAGSSAAAAAAAGVDAPAPDLSSAYLDMRDPMVAANGQRPTAVQISRLNWGFFVASILVGAPWAALNTIAMPNAVARLFDYDTASAISVTINPSTGRPLPVATDLVVPLAVLVVVGVVASMFAMPLVSALSDRTRIPLGRRTPWMVAGGVLCALITLVLGQNTGLVVLCFFWALMQFAYAMISVPLASAISERVPDKFRPRIERWHGIGVMLGQALGVCMGALGVMFDSFTPFAYTAVLFAVSGILTVIMLPKEPSSQEQPHQRFESSQVFDQLRPPAHAPAFARVFAARVCMMTGVGLTGVFLWYLVRFWVYGKAVVFTSAPLTIPAGLLIAGMAAATLIGAALASWAAGPISEKIEERNIATTAVVAASCLLYAIGVAVAWGLGVWSTGTARENGMLLFALISGFAFGVYDALGLELVMNALPDPRNAGHDLGIYALANSVGLALAAIIGAVLVSAFASSFGYYLLFPSAIVMVFLAGIITLSSKAE
>NZ_CP021388.1|WP_003827964.1|149622_151149_+|sucrose-phosphorylase
MKNKVQLIAYADRLGDGTLSSMTDILRTRFDGVYDGVHVLPFFTPFDGADAGFDPIDHTKVDPRLGSWDDVAELSKTHGIMVDAIVNHMSWESAQFQDVLKNGEHSEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSAKGWEYLMSIFDQMAASHVRYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEILIEVHSYYKKQVEIASKVDRVYDFALPPLLLHSLFTGHVEPVVHWTEIRPNNAVTVLDTHDGIGVIDIGSDQLDRSLKGLVPDEDVDNLVNTIHANTHGESQAATGAAASNLDLYQVNSTYYSALGCNDQHYLAARAVQFFLPGVPQVYYVGALAGRNDMELLRKTNNGRDINRHYYSTAEIDENLERPVVKALNALAKFRNELPAFNGEFSYEADGDTSITFRWIAADGKTKAALIFEPGRGLGTDNTTPVASLAWTDAAGDHETDDLLSNPPIADID
>NZ_CP021388.1|WP_014483280.1|148110_149196_+|LacI-family-transcriptional-regulator
MVGMRDVAKKAGVSLSTVSLVVNGNGYVSDDMRERVRKAMQLLNYVPNELARNLYHNRTNLVGVIVPTIRHPFFATFTAHLQHALAAQGLRTMLCSTADEADGEIQYVDMLRRHMMDGIVMCAHTSHPGDYWTSIHRPIVAFDRVLGDGISSIGSDHEQGGRLIAQMLIRNGAKHVVMIGGPRDQFFDLAARGEVEEGPFDLGKTTFPTVRYYLTLEQELTSAGVKYEYVEAGEVMDFAGYHRAVSNALDKVTTDGVDAVVSSDIGASFCVREALSRGISIPDELQIVAYDGTYLTDLAGMKLTAVAQDFSAIAQSTADHIVQAIANEEVAAANASRRDIPKPFEPNVLIPMTLVPGDTTR
>NZ_CP021388.1|WP_106628616.1|147084_147480_+|CrcB-family-protein
MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSYYSQSVDMDTVMMFVVGFLGGFSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVATGFGIVLLANPA
>NZ_CP021388.1|WP_106628615.1|146044_147085_+|chromosome-condensation-protein-CrcB
MESQEQSPGDVVTAGEDSHPITQAIDAVEVTHAGATAPAANTMDPPTIPLAPMKRMQARFNPLADGLMYVVVFVGGFVGVGCRHALDMLLPSVSGTPFVVGTFVSNMVACFLFAMLTEFMATASWLRRRVRQVVSRGVGLGLLGGLSTMSGVMLETMEGLHERHIASALGYLAGNFAGGLLTAAAGVVLMQALLSRSTRKRVRGAFSAVSVSGSAESDTQGVRHVKVADVARSAAQAAMEAAQAAQQIAQTGQVPRVETPTVPPPASQPMQTGRVPQIPPLAVPQLTQPSHPLLREPDTPDLGQLPEIKQSQPIQQPANPLPPSFEPKPITAEISLVADPTTGEVR
>NZ_CP021388.1|WP_106628614.1|144273_145857_+|ClC-family-H(+)/Cl(-)-exchange-transporter
MTGNDAAHDIRRLIPRFDHLKWKMAAAGIVIGLVSGLLVVVYRLGIEYGTDASRWIYARIRETPWLIAPWAFAAVAAALAIAWMVGKEPMAGGSGIPQTNGVVICGLKMRWQTILPVRFVGGLLGALFGLSLGREGPSIQIGASGAQCVSHRLRGRRREDMQEHYLVTAGAAAGLSAAFSAPLSGMMFALEGVHRSFSPAILMGATAASLTADFVSKYCFGLRPVLDFGDIGQLSLEEYVWLIPLGLVAGLVGSLMNRSLLGFQTLYCKLPAWSRSMIAIAIALPVGIWLPDVLGGGSNLIDTAEHARVGLGMLCLLFVAKMLFTSTSFGSGAPGGIFMPILAVGSLAGGICGEVLHRFGNLPSDAVAVFAVCVMTGTLAASVKTPITSILLAVEMSGTLTHMLPVAAVAFVALLVSDLLRTKPIYGELLERYVRAQGMQMAIASHVGSGIMELPLEMGAIADGKRVRDVRWPSGCLIIGLRRGESEIVPRGDTRLRAGDYLVVLFSGEEEREVRPAMRRLCDARLD
>NZ_CP021388.1|WP_025299465.1|142963_144250_+|adenylosuccinate-synthase
MPGIVLIGAQWGDEGKGKATDLIGTKVDYVARFNGGNNAGHSVVVGDESYALHLLPSGIINPNLTPVIGNGVVVDPEVLFEEIDGLESRGIDCSHLLVSEAAHIIAPYHRTLDKVTERFLGKHKIGTTGRGIGPAYADKINRIGIRVHDLFNADHLHDKVEASLHQKNQMLVKLYNRRAIDVDQTTDELLKLGERLKPYVANTGLILNKALDEGKTVLFEGAQATMLDVDHGTYPFVTSSNPTAGGACTGTGVGPTKITRVIGVAKAYVTRVGEGPFPTELLDESGEWLRQQGHEFGVTTGRPRRCGWFDAVVNRYASQVNGLTDIVLTKLDVLTGLKEIPICVAYDVDGERHDDMPTDQAAFAAAKPIYETMPGWNEDISNCHSFDDLPATCQAYVKRLEELSNCRISAIGTGPQRDHVIQINSLVD
>NZ_CP021388.1|WP_003827956.1|141728_142796_+|class-II-fructose-bisphosphate-aldolase
MTIATPERYAEMLDAARRGGYAYPAINVSSSQTLNAALKGFADAESDGIIQVSVGAAAYLSGIGVNDRVTGSLALAAFAHEVAAKYPNITIALHTDHCAKQYLDEWVRPLLAHEADQVAHGQEPTFQSHMWDGSTVPLKENLDIAEELLDKSQAAHTVLEIEIGAVGGEEDGYSAKIDERLYSTPADGLEVARRLGLGERGRYMAAFTFGNVHGSYKPGVVKLRPALLGDIQSRVARAVVEGELPSAAGIVDFPNGKPFELVFHGGSGSRPEEIAEAVSHGVIKMNIDTDTQYSFTRPIADHVFENYDKVLKIDGEVGEKKFYDPRSWGRKAEESMSARVAEACKQLGSAGKALR
>NZ_CP021388.1|WP_025341498.1|140730_141666_+|EamA-family-transporter
MCEPKTAATNGQPTPTLERTPHDIFVGAGLALAGGVFWGVNATVSKLLMNDYHADPLWIACVRELLAGVVFLVCAGIFTPDKFINSLKDYRSYPRLLLCAFFCVLMVQVSYLKAIDWTNSGTATVLQTLNLLVVLVFVCIMGKRLPGKRESIGVVLAFVGTVLIATGGDLSQLSLPLPGLLWGLTDAVCTSLLAILPIALMAKWGNFMANGVMFIVSGLMLLPLVHPWTTAPALDWFGIGLMVFTVVFGTFGAYWLFLGGTQRCGAMRATMLGTSEPVTATITGVLFAGAVFTPTDLVGFAMIIIMVFLVR
>NZ_CP021388.1|WP_003827967.1|155097_156465_+|MHS-family-MFS-transporter
MTATVEETGLGQAASKATAMVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFSDKANPTVALLMSLLTFAIAFIARPLGSLVFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCLPTYDQVGVAAVAILCLLRFIQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGFFLSNGTYFVLESFNDQSAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKVVKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKDTANGGGSLGFTNQEYLLMLMISICVFALFIVLSCLYADKLGRRRVLTFSSCALVVFAVLFPFLLDGQVVGQHNFFANMVFLCVGFALMGIAFGPIGAFLPELFDANVRYSGSGIGYNLAAIVGAAFVPTIATWLAHNWGVHSVGLYLAVMAVCCLVSVLTCKETKDVDFTK
>NZ_CP021388.1|WP_003827968.1|156854_157907_+|ketol-acid-reductoisomerase
MAATIWYEKDADLSVFDGKKVAILGYGSQGHAHALNLRDSGVDVVVGLRPSSKSVEFAKEQGLEVKPVGEAVAEADVVMILLPDQYQAKVYEEEVEPNLKPGAALAFAHGFNIHYGYIKPSEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPDGKTWPLCLAYAKALGALRAGAIKTTFTEETETDLFGEQDVLMGGINHLCDLGFDVLTEAGYQPEIAYFEVFHELKMLVDLANEGGLNKARWSCSDTAQYGDYTSTVITDETKKRMQYQLKRIQDGSFAKEFMDDQAAGAPKFKKLQEEFSHPHLETVGPKLRAMFSWNNAEAKDKDEAESFNGKIARTQVQ
>NZ_CP021388.1|WP_003832411.1|158334_159387_+|ketol-acid-reductoisomerase
MAAQIWYENDGDLSVLEGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVDFAKEQGLEVKSVAEASAEADVIMILAPDQYQRTIWANDIEPNIKPGAAVAFAHGFNIHYGYIKPTEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPRGDGWALTLAYAKALGALRAGAIKTTFKEETETDLFGEQNVLMGGVNKLVEMGFEVLTDAGYQPEIAYFEVCHELKMLVDLMNEGGLNKARWSCSDTAQYGDYTNTVINEDCRKRMEYHLQRIQDGSFAKEFIDDQDAGAPHFKELQEKYSNERIETVGPKLRAMFSWNKDGVKDADEANSFTGKIARAQVQ
>NZ_CP021388.1|WP_106628060.1|160472_161501_-|hypothetical-protein
MDAEHYIRETLGLPCQITSWDGTASLPLFLTNGRTFSKLTIDNTSMLIASGEAHPFSITRVTADASRLEQRTDLPIVFQFPRLSAYQRKALIQNHVPFIVPGTQLYIPSLGMVFTQRISSRPLENAQDIEVRLFSPATQLVWLYLLYSNESKVQSDIARALQFTEAQVSVAVTLLEQLAFVHRTKQGRSNSVELLTSRQTSRLDLLKSSWHLLKSPIFSKYTVTNRNRQMIADELIPAGEFALSRRTQLATPKLRIYAVERHWLKQHNKELCIIDPALEKVPDNAYILELWRYDPRLLAQYTQEDYLADPISTALTLGEIADERLEDAIQESIRNTFSGATI
>NZ_CP021388.1|WP_106628618.1|161707_163522_-|glycoside-hydrolase-family-13-protein
MTANNLNDDWWKQAVVYQIYPRSFKDVNGDGIGDIAGVTEKMDYLKSLGIDAIWLSPFYPSDLADGGYDVIDYRNVDPRLGTMDDFDAMAKAAHEAGIKVIVDIVPNHTADKHVFFKEALAAEPGSPARDRYIFRGGRGEHGELPPNDWQSFFGGPAWARVDDGQWYLHLFDKAQPDVNWKNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELSREYSVVGVLNHDFSHPLFDRREVHDIYREWRKVFNEYDPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQASWYADEFREAIDAGLKAAAETGGSTTTWVMNNHDVPRSPSRYGLPQVKGAPYHQLPHDWLLRNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELGLFEVADIPWDRLEDPTAFHTAQATMDKGRDGCRVPIPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGAGASFGFSPATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYHAALAIRQESLTATRDTTAEQVDMGPDVVAYTRAAVGGRTFTSITNFGTEPVELPGGSVVLTSGPLTPDGQLPTDTSAWVIQ
>NZ_CP021388.1|WP_003832420.1|163793_164825_-|LacI-family-transcriptional-regulator
MAKASIQAVAKEAGVSVSTVSRTFAKPDLVLPETRDKVMAAAEKLDYSISRSAAALKSGQSFRIALLASETITTWFNANIFAGLDSVLRPAGYDTVAYPMRNAEERHDFFADLPVRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSIDDRTATRAAVEHLIALGHRGIAFVGGTPAETNMRYSAESRLQGVLDAQAAHPELTVTNLQVPRGATETSAALNAVLTAPAGTTAFCFEDDELALPVLYRLRQYGKRVPQDISIVGFDDVEMSQAVGLTTMHQDPFAMGADAGRMALEAIAGGPIEPAFIQPDAPLVLRETTAPPAAPVPAQG
>NZ_CP021388.1|WP_077420581.1|164934_165132_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MPGGGNAVDCSAAGICFALRDVSKAAVRKFADMGCVVHIDIVCIMAWDNSLLIPDGGVLTSAVPL
>NZ_CP021388.1|WP_106628955.1|165733_170146_+|choice-of-anchor-A-family-protein
MGTEANPATERDSGVATWVGGDMYVGKKSDNLTNVDGPDASYSAEAEGLTVVNGKLMLHPRKNSWNGKGFRFGVAGFGTQYRPAEGSTALVVGGNTGTVMDSATSTADVKAWNKPGFIDGHSHVGSLSGSQSDVWGRDGTSSIGSYNGASVNWQKDKSGNTQNQDAGNLTKVSVKATDGGAATDKDFSKDTFYQGYVVDDIVSPLAKQNNTGTVSSSISTWPGLTRHKYNYLEEGTNAASGISYTFKYDDTTKYGTDRGIASTTSYTNREKLITFTGTNNASMEVFNLDASMLSDTDENGTLYRGVGFAFANIADTASVVINVTGNAGNISFHNGWQFWWNGAEISDGYSNYNNTDELKKKSAAYDKAAQKILWNFSNTDNLTIYGGVANEDGTNTNADKITQDDAAAAMMGSIIVRGNFESHVSTNGRVYTGGDFSMYNPYKAWVFNQAGANDGDSASVLDMDQERHNFPWNGSYTESCSAIAWQKADESGTLLGGTTWAVYGKYDDAASGKNALLTVQDNAFYDKDSADGRFTVEGLKPNATYYIKEVSAGNDYQLNTNVYYVATGDSSATPVNVTQSVTKTDGAYTYGSADMTDGKIVNKKNGHEVSWSKVDADTNKELAGSEWQIQQVKDGAATKSWNVTDNTSKATGVTVNPTSATLDSTNGWKTDLTAAVDPKDALQEVAWTFTDKDGNAVDSSTVAVLTRTGNLKTTVTGISSIDTTVYVKACSVSNPEVCSALVTIKVKAMSVKDFTVKDSSNRTVENNSTITAAAVDSTLTFTASSTPAVPITWESSNKSVATVTSSGENGQKATVTMTGFGSAVITAKAGDKKVSFTVKVPSTTVYFKKSLMNWSKYYVYYNAGNNNWKFVEMSQSCGDYVYAILPKQSPGTEFLFHGDDENTSTNKWYQGSNKSDFKFTGNEVQVVNLYNDSQVSTAPAGCPASAAAAAQSNDAAVLNENAVVTPADDPQPSDADGVAENAIDDGAKAISCTAADGENGRPGVKCDMDTAAGKFKVGGLDAGTYWLHETTAPDGYTINKTLYQFTIDANGNVTWNGGWANGEATGAIDEKLKPGDNNAISDTPTEVTWNKVDTKGGKLAGSQWKIVGPSPATDVYCVADNVTVDANGATTPAGIEFTGCTGEKLSDAANTADEAGVITVRGLPVGRYTLTETKAPDGYVATTTVYTLTISDTEASTVVAQTATDRPTTRSGGNREAAANVPNASAPVNIQIPVKKSVKYTSWPKDSNGNYVNFNFKIEATKSTVDANPAAPMPAECSSSDATKNDCTISLAPKSDADDLSNVIAKFGKMTFTDANLAAAAGDASDYAKTYTYKITEIVPDSADAVENLRYSKAEYQVVVTVKQAKDSSGKLSGLSVSATMTRIKDDSGNAEAGGGKMIGTWSSTSTGSSAGTAVEATFVNTKVLTGLPTTGADWTGRLVLLVGDGFILAGVLIAGGYQLAKRRREEDSD
>NZ_CP021388.1|WP_106628619.1|170250_172089_+|isopeptide-forming-domain-containing-fimbrial-protein
MNTIFKRVISGAAALGIAVSGLAIGVSTAYAADPTTGSITINKSDTGQVDHSFDGWHLASLTNVTKDSTNKINGFLIDTDDNMVRTIVAAMTSDQKVAYEKDANYYSTDNAVANPMGYLVEKVFKDKSGKALSELTSPWGGDSSTLRVFAKSLSKELAKAGAPTADKTGDSALKTGENKELKQGLWFLKDVTTTDDTKGTNSIPIITPTTFDGAGSWGTVTLKNTTPTIDKKLVDSKGDGTYTPNTQPDYAVGDDVYYELTSTVPVYTGYDIDSTMMDATKTRIFKINDTASKALTVSADTVIESVKLTPAQGTAVTLVKDKDYTVTVAGYGDVNTPDPDAYKGGHVTTIDLGKYVNKAEGSKSATDGILEGATVTVIVKAKLNKDALISKPGNLQKNPNKVDLEYSNHPEEVNHAHKVPGPEVPVYAYKFDILKTDKAGTTKLPGAKFTIKAVSGTSKHDGKYLGSYGKDGWSYLDSEPAVADTDGVFTTGTDGKINVSGLDAGTYEVHEIAPPDGYTAISLPKFQFTITPTVGDEAAGCKTITVVALSLAKGADERASLSQDGKTLNIWNAKNITELPKTGGVGLAMIVAVGALFIAASGIFALRARRKA
>NZ_CP021388.1|WP_065458174.1|172344_173304_+|class-C-sortase
MRSSTGAKQSGTRTQSRVFTVLSVLFLLIGFAIITTPFVMRAISEYQQNATVQQTQREVDGWPYPQAENQLKTAREYNKKLVAGGQAAIGEVKDPFASNAGQSTTSGADDSMAAKDQEYQSLLDAGQGVMGSIRIPKIDVNLPIYHGTSEDALAVGAGHLYGTSLPVGGKSTHSVITGHRGLPNSLLFTRLDEMKKGDSFYIEVMGKTLGYKVDRITVIKPDDSSKLRITKGEDRVTLMTCTPYGVNSHRLLVSGVRAEIPEEVPDPDDVHGINTTWLALGAIVFLAVLFAFIVILMRRKQKRDREFAGLARHAARPTK

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Crispr_ID: NZ_CP021388_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021388_2

1698495-1698664

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCTCCCCGGATGGGGATCGACG	CRISPRCasFinder

2 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP021388_2

>merge|NZ_CP021388|2|1698495-1698664|CRISPRCasFinder
ATAGGAACCCACGCTCCCCAGATGGGGAGCGACGCTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTGATTTCAATCCACGCTCCCCGGATGGGGATCGACGTCCGATGCCTGCTGACAAGGACAGGAAAGCACTATTTCAATCCACGCTCCCCGGATGGGGAGCGACG

>NZ_CP021388|2|2|1698495-1698664|CRISPRCasFinder
ATAGGAACCCACGCTCCCCAGATGGGGAGCGACG	CTGGATTTGAGGGCTGCGCGGGGTATGGGGGCTTG
ATTTCAATCCACGCTCCCCGGATGGGGATCGACG	TCCGATGCCTGCTGACAAGGACAGGAAAGCACT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021388.1\|WP_003830251.1\|1695668_1695953_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP021388.1\|WP_003832943.1\|1692330_1693344_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP021388.1\|WP_025332388.1\|1685110_1685824_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319790
NZ_CP021388.1\|WP_003832945.1\|1691486_1692191_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319790
NZ_CP021388.1\|WP_051994509.1\|1710180_1711947_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP021388.1\|WP_003833378.1\|1709255_1710188_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP021388.1\|WP_003832954.1\|1685883_1687458_-\|proteasome-ATPase	unknown	unknown	gnl\|CDD\|200312
NZ_CP021388.1\|WP_015438265.1\|1699561_1701043_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP021388.1\|WP_100218471.1\|1688227_1688980_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP021388.1\|WP_014483316.1\|1698773_1699559_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP021388.1\|WP_079287463.1\|1712884_1715287_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP021388.1\|WP_074525147.1\|1693639_1695502_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP021388.1\|WP_032739753.1\|1711943_1712600_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP021388.1\|WP_052792071.1\|1707406_1708438_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP021388.1\|WP_003832947.1\|1689027_1691337_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|237844
NZ_CP021388.1\|WP_003833379.1\|1708434_1709130_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP021388.1\|WP_065506919.1\|1706365_1706599_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021388.1\|WP_106622661.1\|1696238_1697459_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP021388.1\|WP_003833383.1\|1707059_1707350_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP021388.1\|WP_003832951.1\|1687511_1688207_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659

Protein	Function_ID	Function_description	E-value
NZ_CP021388.1\|WP_003830251.1\|1695668_1695953_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.88678e-17
NZ_CP021388.1\|WP_003832943.1\|1692330_1693344_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	3.09461e-130
NZ_CP021388.1\|WP_025332388.1\|1685110_1685824_+\|HAD-family-phosphatase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.1133e-34
NZ_CP021388.1\|WP_003832945.1\|1691486_1692191_+\|HAD-family-phosphatase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.32725e-46
NZ_CP021388.1\|WP_051994509.1\|1710180_1711947_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	4.97416e-177
NZ_CP021388.1\|WP_003833378.1\|1709255_1710188_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	9.36927e-135
NZ_CP021388.1\|WP_003832954.1\|1685883_1687458_-\|proteasome-ATPase	gnl\|CDD\|200312	TIGR03689, pup_AAA, proteasome ATPase. In the Actinobacteria, as shown for Mycobacterium tuberculosis, some proteins are modified by ligation between an epsilon-amino group of a lysine side chain and the C-terminal carboxylate of the ubiquitin-like protein Pup. This modification leads to protein degradation by the archaeal-like proteasome found in the Actinobacteria. Members of this protein family belong to the AAA family of ATPases and tend to be clustered with the genes for Pup, the Pup ligase PafA, and structural components of the proteasome. This protein forms hexameric rings with ATPase activity. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP021388.1\|WP_015438265.1\|1699561_1701043_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.9484e-14
NZ_CP021388.1\|WP_100218471.1\|1688227_1688980_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.86556e-101
NZ_CP021388.1\|WP_014483316.1\|1698773_1699559_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.68478e-58
NZ_CP021388.1\|WP_079287463.1\|1712884_1715287_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22614e-50
NZ_CP021388.1\|WP_074525147.1\|1693639_1695502_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP021388.1\|WP_032739753.1\|1711943_1712600_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.37358e-87
NZ_CP021388.1\|WP_052792071.1\|1707406_1708438_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.77418e-179
NZ_CP021388.1\|WP_003832947.1\|1689027_1691337_+\|primosomal-protein-N'	gnl\|CDD\|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP021388.1\|WP_003833379.1\|1708434_1709130_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	6.22077e-31
NZ_CP021388.1\|WP_106622661.1\|1696238_1697459_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP021388.1\|WP_003833383.1\|1707059_1707350_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.39737e-29
NZ_CP021388.1\|WP_003832951.1\|1687511_1688207_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	7.53697e-44

>NZ_CP021388.1|WP_106622661.1|1696238_1697459_+|methionine-adenosyltransferase
MTEEHRLISAESVTEGHPDKVCDQISDAILDDLLAQDPSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGAQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGKVPHLRPDGKTQVTIEYDDNDQPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFVLGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHKVEIQIAYAIGVADPVSINVETFGTEQGVTRGQIAAAVRKVFDLRPAAIIDELDLKRPIYLKTAAYGHFGRTDVEFPWEKTDKVEELKAAIAGE
>NZ_CP021388.1|WP_003830251.1|1695668_1695953_+|DNA-directed-RNA-polymerase-subunit-omega
MAFGTDPTPDGLANPPIDDLMQHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNNEKPLSIAFREIDEGLLEETLGEDDTNEGN
>NZ_CP021388.1|WP_074525147.1|1693639_1695502_-|dihydroxy-acid-dehydratase
MTEMRSAKIMSGRVFAGARALYRAAGVSGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIREAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADGTVKSTDLIDVMYATADDSVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAQQVVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVPCICKASPSGKWEISDVHRAGGITGILGELERAGKLHTNVHSIDYPTLEAKLADWDIMRPTCTEEAKQMYKAAPGHIISPEPWTHTTLFDSLDRDRVNGAIHDIDHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGYVAHRDRHVSQALKAYAAFARSADKGATRDPELINKLSGLA
>NZ_CP021388.1|WP_003832943.1|1692330_1693344_+|methionyl-tRNA-formyltransferase
MLKLVFAGTPDVAVPSLQAFAADSRFEVVGVITRPDAPTGRGRKLTPSPVKAAAVELGLTVIDTKPRSPEFMEALKGLHADIAAVIAYGNILPKSVLDAVPMGWYNLHFSNLPKWRGAAPAQRAIWNGDPTTGADVFKVGEGLDDGPIIASLTIELTGRETSGELLARLAEEGAPMYVDALAAVGSGTAVFTPQPAEGLEYAHKITVEDARINWADPAEAIDRQIRACTPHPGAWTELFAEGLIADSGEANEESSNLATTAKSLTLHILAAQPADQMNPNTPIDLDPGELKVGKKNVWVGTGTGALELTQVKAQGKKAMRAADWARGARLSPAACVR
>NZ_CP021388.1|WP_003832945.1|1691486_1692191_+|HAD-family-phosphatase
MKGWPGEPDMDYDVLVADGEAAANAGKPITDVIFDFGNVLIYWDPAAVLIPRYSQKTIDEFLDNDISGFYDVNDLMDGGTSTEEAIAIMRERKGDKWADILDYYIKNFRDSLTGIVPGARVLVDDLKAAGIGVWGLSNWEASLFHVAEEQCDILQKLDGKLVSGFVKLRKPHKEIYDAALKEFGIKADGALFIDDKAMNIVGSNAAGIRGVRFQDPVKLRELLIANGVNIPDVQ
>NZ_CP021388.1|WP_003832947.1|1689027_1691337_+|primosomal-protein-N'
MTTSDAQQLTFDGLAPRKRRKRAPAEHTPAEHDPIAQVVLDVQALHLGQTFDYFIDEKDSDAAQPGVLVRVRFGGQRVGGVIWSRTSTSDTPRSSIRYIERVLSPDVLVPASMREDIGLIANAYGGTRANILRFAVPPRVAKVEAEQRLTASFRRPVGGSLPDNVQGGFAGRGTLPDGTRPSGSSFEVADSVSEGAAQAYRRIVANYGEANVLNDALHGQRFQSFVFDLLSGAQEWQRNMAWMVATALSAGKPSVVELPTMREVEDLLPMLRNYGLKPFSPTPSGSWIGDVAVLNAQMPAADRYRAYLAVALGQVKVIIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHGGVFVAMANARTVQSQWENTGPGTVETPVSGYSTAIHPLASPLKDATPWVRWLNRDELARLADATIGARVPHTAVRVLSKALESGPVLLSIPQDSTSEALSCAKCHRQARCAKCSGPLQLPADRSESAPRCQWCGAAAIHWICPGCGHERMRVVRVGAAGTAAELAGLFRSVPMVLSSKAQGLVRDVPCKPMIVIATPGFEPRVRPVSNERGAAGHEYRAVAILDAWTSLYALGVDARLDTLTAWMRAVSLCAPRSRGGQALILGETDPAIAQSLMMWDSRILASKDLDERMETGMPPTVAAACVWGRRDAVMTLMQRIGALGGDWAVCGELPGMLGPVPIAQPDTVDARELEATADRVKAVVRVPQSQRAELAIRLHRETARHVASREPGELRFRIDPKDLI
>NZ_CP021388.1|WP_100218471.1|1688227_1688980_+|phosphoserine-phosphatase-SerB
MSQGFSRIESMMQEDVHFIDKSAESEVGALGGSADSVPTLAEPGLLVMDVDSTLIDEEVIDELGEAAGSGEEIAKVTERAMRGELEFCDALRARVALLKGLPVSVFDAVHDKLHFTKGALELIDTLHAHGWKVGVVSGGFHEVVDKLAAEGHIDYWIANRLEVADGRLTGKVLGEIVCKTVKLHALREWAKQLDIPMSQTVAVGDGANDIPMIQAASLGIAFCAKPKTQLAADEAINDRDLMHVLDYLRR
>NZ_CP021388.1|WP_003832951.1|1687511_1688207_-|DedA-family-protein
MELATALAANPTPICTTSEGGLIGTITEWLITLMETIGGIGVALAIALESVFPPIPSEVILPLAGFTAARGTLSLPGAIIWATIGSLLGAWTLYGISRWVGLHRINRAADKIPGVSRKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLQFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIVVVVVVIVWFAVKKVRTVVRNRKAQHNE
>NZ_CP021388.1|WP_003832954.1|1685883_1687458_-|proteasome-ATPase
MGEAENLAELNDRLMAKNHALAEALNRAGKELTKAKSQLAQLAQPPLTFATMVKIDSTHTDEDGVQHASAEVISGTRRMIVPVAANVNASRLAAGSTVMLNEKLVLVEQRDADTVGQIRVVKQILDDGRLIVADASGNPVLVRRSSALSLTAISQGDRIIVDPSVRLAIELLPNESDRDLVLEETPDVTFADIGGLDSEIGRIRDAVQLPFQHRALFERYDLKPPKGVLLYGPPGNGKTMIAKAVANALCEGGYDMDGDGSINGREQQVKGVFLSVKGPELLNKYVGESERLIRLIFQRARERAAEGKLVVVFIDEMDSLLRTRGSGVSSDVETTIVPQFLSELDGVESLDNVMVIGASNRVDMIDPAVLRPGRLDVKIRIDRPSGEAAASIVRHYLTDDLPLEQGLDADALSRVLVRDIYTRSERRHLADVRDERGTWNALFLADVVSGASLKNIVDRAKTHAVKASIASGKDVALDATLLGRAVEDEFAETRDSLLDADPVQWARVNGFDAGRVTAIRAVGR
>NZ_CP021388.1|WP_025332388.1|1685110_1685824_+|HAD-family-phosphatase
MKGWPGESELNIPFNEVIAYDAAAAHARQPIANVIFDFGNVLVDWEPQALFMPRYSEKRIEDFLDNDISGFYDACDRMDAGASPAEGIAWIRETHGERWAEMLAYYFDNFLDSLTGTIPGMRVLVHDIKTAGLGVWGLSNWQRETIGEAENAYEILRMLNGRVISSEVHMRKPDTAIYMKALESFGIDAETTVFVDDRASNVIGANRAGIRCIRFRDERGLRETLIDAGVPIPAVAE
>NZ_CP021388.1|WP_014483316.1|1698773_1699559_-|ATP-binding-protein
MGIHRPPVVMPDMKRRRASTGEKIETIMNLARRLPLTRQILADQLANATPTQMEFVEEWMNAELESRERSKRSRLLKQAGFPADKELDGYDWTPIRFPVDYGRQRIESLEFISGHEDLVLFGPPGTGKTHLAIALGRNACRRGMPVRYHTAASLVMRLLRAQTDNRLDRELAMIGRTPLLIIDELGYVPIDEEGSRLLFQVVTNAYETQSIIYTTNIEFSGWGRIFGDPNMAAAIIDRTVHHGRMIRFEGESWRKTHALMQ
>NZ_CP021388.1|WP_015438265.1|1699561_1701043_-|IS21-family-transposase
MTVPVSVQQRIRVLDAHGVSWRSIAKEVGVARDTVAKYAGREDCSPKPEHSASRPSKLDPFKATVDGWLEADRFMPRKQRHTAKRVYDRLVSERGYGGAYSSVQRYVKRWREEHRLPSDGYLELEWHPGEAQVDFGMARAVVGGDRVDVHCLVVTFPYSNMRYCAALPGENAECVCAGLRTVFEHIGAVPLTLVLDNATGAGHRVAWDRVSIVKVFELFVEHYRLETRFCNPNSGNEKGSVENAVGFLRRNIMVPLLNAESYAQLTRYMLERCDAMAKETHYRKGAPIGGLFAEEKAEMQPLPSKPYDAIRWEVRKADKDGRVQVDGNHYLAGPSWRGWTLDVALRAFDVTIRTQDGRTCARLPRVYGDSPATIRDPATLLPALGRKTNAWPDSTIRDDFPDKLRLAIDRMDAKARRNAFRLISRTSDACGFEPAVEAGEHLVEQGHPLDEASLTTMARRIASGEKPYEQTAPDLTGYDVFMQPRGTRERKEA
>NZ_CP021388.1|WP_065506919.1|1706365_1706599_-|hypothetical-protein
MTMVESLPTYSSAEAEARSKGDNLISMINVYLAGYAAAGTPVDVETTGKTLHALPTDTVLRTDADFDAFEHEVLGDD
>NZ_CP021388.1|WP_003833383.1|1707059_1707350_-|CRISPR-associated-endonuclease-Cas2
MMVVVAYDVNTETPDGKRRLRSVAKTCMKYGQRVQNSVFECSVTPSDYLILKHDLAEIMDEMCDSLRYYNLGSKYASKIEHRGRQRHVPVDGVMML
>NZ_CP021388.1|WP_052792071.1|1707406_1708438_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYVTSEDAYLSLKNDNVIVQQGDATLGQIPLRSLESIVSFSYKGASPALMGRCSEFGVGLSFFSPHGRYYCSILGEKNRNVLLRREQFRFADDDGAALSFARSFIIGKIYNSRWVLERTKRDHALRINSERIAEQSEKLRQSLLGIRDCTSIDELRGVEGLAAKDYFFVFDDLILRNKDAFFFEQRSRRPPLDRANALMSFVYSILTSDCVAALQGVGLDPYVGFLHTDRPGRASLALDLVEEFRPAIADRFVLTLINTGVIKPSQFEVRENGGVFLSEGGRKTVLAAWQKRKQETITHPFFGEKIPWGLVPHVQALLLNRAIRGDLDAYPPFMWK
>NZ_CP021388.1|WP_003833379.1|1708434_1709130_-|CRISPR-associated-protein-Cas4
MHTQSEYPEDDWLALSGLQHFAFCRRQWALIHIEQQWRDNYLTTAGSLEHDRAHDYGASEARGDLLIMRDLRVFSRRLGITGACDIVEFRQSDVGVPLHGRAGTWLPYPVEYKHGAPKQADADRLQLCAEAMCLEEMLACSIPEGALFYQQTRHRERVRFDESLRDQIVTMSGEMHDLFARGHTPNVKPSKSCRACSLLDICLPKLAGSRSAEQFIDEVMRAEAAEQENRT
>NZ_CP021388.1|WP_003833378.1|1709255_1710188_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTDRKPIENRYDFTILFDVKDGNPNGDPDSGNMPRVDIETGNGLTTDVCIKRKIRDYVQTVMGEQAPWRIYIQNRQTLNRLDSEALKAEHIGASLESKDFAKEIKALKKTDPELDRRLRDYMCDQFFDIRTFGAVMTTFVKGSLSCGQVRGPVQLGFARSIDPISVQEISITRIAVTTEADAAEKNNTMGNKFIIPYGLYRMNGYISAKLAQNVTGFCDEDLDVLWQAILNMFEFDRSAARGNMAVRKLYVFKHSSALGDAPSWKLFDSINVHKRAEVDAPRDFADYEVRVNREAIPESVSLTEMVDHAL
>NZ_CP021388.1|WP_051994509.1|1710180_1711947_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MIIGDLCDEYAVLVSQNKAPAYGYDNTNVPYGLVVDDDGTLIRVRPLGDFSGKKPVNIIPVPARFPRSSGIVANFLCDNVTYLLGCDTKGNAKRAAQAFQACSELHRRILDGVKDRAASAVCAFFSKAPQWQTAQRLMGDEAWKSSVTMNFALEYDDGGRTIFIGELPSIREAWDAYYGRVDDADESALVSSLVSGERIVSEKVHPKIKGVAGAQSSGASLISFNAPAFCSHGAEQNENAPMSKREAYEYTTALNTLLADRDRVQRIGGDTVVSWANCGDNAYRDVWDQYMGQSGGLSEKVVVDATRALAQGKPYDYEGIHLSPDEQFHILALSPNAARLSVRFYLTDTFGAFARNIDRHYRDTAIRRPVYDSTTSLPTWRLLNQTIRTQSKTAKVSPQMAGAVMKAILEDTPYPMTLINAVERRINAEHDISPDKAAIIKAYYLRATTNAQFKEVLRMDINEESDYLPYVLGRMFSIYEQIQLAAIPGINTTIKDKYFTSASATPARIFPILGDLAAKHMRKTWKSEGLKVKLDKALGELTGRVGDRYPSRLSLEERGAFQLGYYFEKQKRFDKANKNNNEQEENND
>NZ_CP021388.1|WP_032739753.1|1711943_1712600_-|type-I-C-CRISPR-associated-protein-Cas5
MSIRLEVWGENALFSRSEFKTERVTYDVMTPSAARGILEAIFWHPGMRWRIDRIHVLNPIRFDSIRRNEVDSVINIGKIRTMAEGRGDGGAIYTAESIQQRSSTILRDVRYVIDAHFELNRAKMSSTDSAEKFQSMFMRRAAKGQCFHHPYFGTREFPVEFQLWQESSDPVGFEHGHRDLGYMLYDFDYRNPAHPAPLFFRAELDDGVLDVESVEVRS
>NZ_CP021388.1|WP_079287463.1|1712884_1715287_-|CRISPR-associated-helicase/endonuclease-Cas3
MCATYYARTSDHGYETCAEHLAMAGCLAGGFAKGFGYLDDGLLAGLVHDLGKYSDAFQRRIRNPDHCGPVDHSTAGALLLMRYACPLAAMAVAGHHAGLPDLGSYGELEGPTFMSRMNRARRAGDCNPLALAQAGETQLNIPQPAFLHGTRSAKPTTSGKRSERWSLYTDMMLTRMLFSALVDADRLDAEFFTSNRIDRAEHHILESLKKHLGPQNLASGRVPAFDALREASLTVSVERDAEDRSRIDRLAAIMENTADGYLAAPDKRPIDIRRCELLERCLDCGKDPSYGTGLYTLTAPTGSGKTISSIAFALEHARTNNLRRVIYVIPYTSIIDQTVGQFEAIFGMDAVLPHYSEAPYQLKNESDMDEMDLRRVLAAENWNAPIVVTTAVQFFESLYSNATSRCRKLHNIADSVIVFDEAQTLPVPYLRPCVRAIAELVERYGSTAVLCTATQPELQPLFDESFDGDHVRVPEISPFTRDDRDSFRRVTIERLGDIALDALAERLGNHKQVLCVVNTRSKAQYLHDRLAEDDAEGSFCLTTLQCAADRQRLFAEIRDRLDAGASCRVVSTSLIEAGVDVDFPIAYREEAGLDSVIQTAGRCNREGRRSASESVVHVFSTEGGCAPFLRQNIAAFRAVADRHADLNTDEAVRAYFAEVLCLRSGGVARANVGNDALDRKRILPLHGRDANWPFADIAKRFRLIDTPTIPVYIPLPGDGALLCERLERGDMDRTLFRKLGRYAVNVWPRHLEQLKSVGAVSTVGSGKNDEEDCFVLRDMGLYSSRLGLRLDGATADGIFV

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Crispr_ID: NZ_CP021388_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021388_3

1701249-1705540

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	PILER-CR
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CRISPRCasFinder
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CRT

63 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP021388_3

>merge|NZ_CP021388|3|1701249-1705540|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGCGTCGCGCGCGATACCCTCAGGGATGGAATCGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACAATCGGTATCCGCTTGTAATGTTTTCACGAACTTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACATGGGAAAACCAACACTGCCGATTACACTCACAATGATTTCAATCCACGCTCCCCGGATGGGGAGCGACATGGCGCAGGGCGCACGGCCCGAGACACGGGAATCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTGGCACTGGCTCGCCGTTGACGTTCAATGGCTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGGCGATATGGTCACGGATAGACTGCAACACCGATATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTCATCAGCATGTTCTTCGGAATCATCATCACCATATTTCAATCCACGCTCCCCGGATGGGGAGCGACCATCTGCCGTCCTGCGGTGTCCTCGCTCAGGTAGGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACGCGCGTGCCCCACGGTGCGGCATTGCTGCCGAGTTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGGGTGGTTTCGTCCATGCCTTGGATGGGGCCGGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTGTTACGCTGTCGCGTGTAATCGGAGTATCGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTCGCGTTTGATTTGGGTGAGGTCCTTGCCGTATTCATTTCAATCCACGCTCCCCGGATGGGGAGCGACAATGACAACAACGTGTTGACTCCGGATTTCAAGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTGTAATCGGTGTCCGCCCGCAACATTTTGACATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTCACGACGTAGATGATGGTGCGCACGGTCGCGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGGCGATATGTTCCACCGCTTTTTCGATGACCGGGATATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGCTATTTTATTGGTTGTCCGAAATTCATAATCAGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACAGGCACGCACACGCTCGAATGGGCGCGCGCCGAAGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTGTCCGACGACTACGATCCGACCCACGGCAGGTTCGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACCACCGCTCACCGAAACGTCACCCGTACAGCTTCTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGATACATCTTGATTCCGCCATTACGGTGGATAATGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTTGATTTTTCGCATGATATTGTCAATACGCCGTATCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGGCCGCGTTAGCGCGTGCCAGCGAGTCCGAGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACAACGCAAGCGCGTGAGACGCGCGATAAACAGTCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCCTTTCCGTTGTCGGTGCGGGTGAGTGATTCGATATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGCGTATTTGAGCATGAGCATGAGCTGGACATAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTCACGACATTGATGCTGGTGCCCGCATCGGTGGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACAGCAACCGAAATGACCACCGCATACACATGCGTAATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGACGAGATGGCCGACCCCGAACTCGAATCGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACAAGTTCCTCCACGTGCATCTCTACCCGTGGCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCTCGAAGACCTCGGATACCCCATCTCGGACGAGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTGACCTCGCCGCCAAGGTAGCGCATGTTGTCGGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACACTGCTTTGCCGGTTTCTTTCGCCACGTTCTGGCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACATACAATTCGGATACAACGAAAACGGAATATATATATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGACTTGCGCAACGCATAAGACTCATAGTTTACCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGCCCCGATTAATCACGTTGGACACCTGCGCATCATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGTACGGTGCTGCCCCAATAGAGATTCTCCTTCTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTTGACATTGGTCTACTCCTTTACTGTTATTTAGCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACAATACCAACGCTATTGCGATGGCTTCGTTATGGTGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGTGACTGCCGGGGTAGTTTTGACTGCCGAACCTCCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACAGGTTGCCACGCCCTGCTGTTCCATCTCGTGAATATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGCGTTTCGCCACAGCCCCCCCTTGTAAGTATGATTTCAATCCACGCTCCCCGGATGGGGAGCGACGAGACTCAAAAGCCCCTCTCAGCATTATGCCGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTATCGGTTACGATACGTTCGGCATGCGCCATATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGTATCGGTTACGATACGTTCGGCATGCGCCATATTTCAATCCACGCTCCCCGGATGGGGAGCGACGGATCGAATAATGGATGGCCGCAACGCCGACCGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGCTGCTGCTACCCAGCAGGCGGGCGATATCCTCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGAAATTCGGACAGTTTCTACGCGAATATGATGAATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGAACATCAAGGGTCTGCTCTCCCGCGACATCCAATTTCAATCCACGCTCCCCGGATGGGGAGCGACTATAAACCTCGTGAAAACGGTGGAACCCCTACGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACAAAAGTCCATTGATAGCCGTTCTTCAGCATCATAATTTCAATCCACGCTCCCCGGATGGGGAGCGACGCCATCCAGCCCAACGTCTACCAGACCGGCGAAGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCGTGGTGAGGATGGCTTGCACGCCATTCATATCATTTCAATCCACGCTCCCCGGATGGGGAGCGACACATCACCACGGCGACGGCGGCGGCGAACAATGCATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCACGCTGTTCGGCGTGTCCGGCAAGAAGCAGGTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCTCAAACGTTCCGATGACATGACGCAAAAAATACTATTTCAATCCACGCTCCCCGGATGGGGAGCGACACTTCGTCGGTGTCACTTAATTGTTGATATACGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCGGTCACGTTGAGCGCGTTATACTGCGTTGAGGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACAATGCTGAATATCGCGTTGTCACGGTTCAAGTGGCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTCGCTCATGCCCAAGTCCATGATGGCCTTGTTATTTCAATCCACGCTCCCCGGATGGGGAGCGACTGAAGTTCAGCAACCAGTTCAACAACGTCGCGCTATTTCAATCCACGCTCCCCGGATGGGGAGCGACCGCATCCGATGATAATCATTCTTGTCCAATGGTGGATTTCAATCCACGCTCCCCGGATGGGGAGCGACCCGAGCGTGGTGTGACCGGCGTTGCGCATGGCGATATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP021388|3|1|1701249-1705540|PILER-CR
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTCGCGCGCGATACCCTCAGGGATGGAATCGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATCGGTATCCGCTTGTAATGTTTTCACGAACTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGGAAAACCAACACTGCCGATTACACTCACAATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGCGCAGGGCGCACGGCCCGAGACACGGGAATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGGCACTGGCTCGCCGTTGACGTTCAATGGCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCGATATGGTCACGGATAGACTGCAACACCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCATCAGCATGTTCTTCGGAATCATCATCACCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CATCTGCCGTCCTGCGGTGTCCTCGCTCAGGTAGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGCGTGCCCCACGGTGCGGCATTGCTGCCGAGTTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGGTGGTTTCGTCCATGCCTTGGATGGGGCCGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGTTACGCTGTCGCGTGTAATCGGAGTATCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCGCGTTTGATTTGGGTGAGGTCCTTGCCGTATTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGACAACAACGTGTTGACTCCGGATTTCAAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTAATCGGTGTCCGCCCGCAACATTTTGAC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACGTAGATGATGGTGCGCACGGTCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGCGATATGTTCCACCGCTTTTTCGATGACCGGGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCTATTTTATTGGTTGTCCGAAATTCATAATCAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGCACGCACACGCTCGAATGGGCGCGCGCCGAAGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTCCGACGACTACGATCCGACCCACGGCAGGTTCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACCGCTCACCGAAACGTCACCCGTACAGCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATACATCTTGATTCCGCCATTACGGTGGATAATGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGATTTTTCGCATGATATTGTCAATACGCCGTATCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCCGCGTTAGCGCGTGCCAGCGAGTCCGAGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AACGCAAGCGCGTGAGACGCGCGATAAACAGTCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCCTTTCCGTTGTCGGTGCGGGTGAGTGATTCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTATTTGAGCATGAGCATGAGCTGGACATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACATTGATGCTGGTGCCCGCATCGGTGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGCAACCGAAATGACCACCGCATACACATGCGTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGACGAGATGGCCGACCCCGAACTCGAATCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTTCCTCCACGTGCATCTCTACCCGTGGCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCTCGAAGACCTCGGATACCCCATCTCGGACGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACCTCGCCGCCAAGGTAGCGCATGTTGTCGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTGCTTTGCCGGTTTCTTTCGCCACGTTCTGGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATACAATTCGGATACAACGAAAACGGAATATATAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGACTTGCGCAACGCATAAGACTCATAGTTTACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCCCCGATTAATCACGTTGGACACCTGCGCATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTACGGTGCTGCCCCAATAGAGATTCTCCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTGACATTGGTCTACTCCTTTACTGTTATTTAGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATACCAACGCTATTGCGATGGCTTCGTTATGGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACTGCCGGGGTAGTTTTGACTGCCGAACCTCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGTTGCCACGCCCTGCTGTTCCATCTCGTGAAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCGTTTCGCCACAGCCCCCCCTTGTAAGTATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GAGACTCAAAAGCCCCTCTCAGCATTATGCCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGATCGAATAATGGATGGCCGCAACGCCGACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCTGCTGCTACCCAGCAGGCGGGCGATATCCTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAAATTCGGACAGTTTCTACGCGAATATGATGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAACATCAAGGGTCTGCTCTCCCGCGACATCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATAAACCTCGTGAAAACGGTGGAACCCCTACGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAAAGTCCATTGATAGCCGTTCTTCAGCATCATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCCATCCAGCCCAACGTCTACCAGACCGGCGAAGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGTGGTGAGGATGGCTTGCACGCCATTCATATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACATCACCACGGCGACGGCGGCGGCGAACAATGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCACGCTGTTCGGCGTGTCCGGCAAGAAGCAGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCAAACGTTCCGATGACATGACGCAAAAAATACT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTTCGTCGGTGTCACTTAATTGTTGATATACGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGTCACGTTGAGCGCGTTATACTGCGTTGAGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGCTGAATATCGCGTTGTCACGGTTCAAGTGGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGCTCATGCCCAAGTCCATGATGGCCTTGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGAAGTTCAGCAACCAGTTCAACAACGTCGCGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCATCCGATGATAATCATTCTTGTCCAATGGTGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGAGCGTGGTGTGACCGGCGTTGCGCATGGCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP021388|3|3|1701249-1705540|CRISPRCasFinder
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTCGCGCGCGATACCCTCAGGGATGGAATCGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATCGGTATCCGCTTGTAATGTTTTCACGAACTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGGAAAACCAACACTGCCGATTACACTCACAATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGCGCAGGGCGCACGGCCCGAGACACGGGAATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGGCACTGGCTCGCCGTTGACGTTCAATGGCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCGATATGGTCACGGATAGACTGCAACACCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCATCAGCATGTTCTTCGGAATCATCATCACCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CATCTGCCGTCCTGCGGTGTCCTCGCTCAGGTAGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGCGTGCCCCACGGTGCGGCATTGCTGCCGAGTTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGGTGGTTTCGTCCATGCCTTGGATGGGGCCGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGTTACGCTGTCGCGTGTAATCGGAGTATCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCGCGTTTGATTTGGGTGAGGTCCTTGCCGTATTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGACAACAACGTGTTGACTCCGGATTTCAAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTAATCGGTGTCCGCCCGCAACATTTTGAC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACGTAGATGATGGTGCGCACGGTCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGCGATATGTTCCACCGCTTTTTCGATGACCGGGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCTATTTTATTGGTTGTCCGAAATTCATAATCAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGCACGCACACGCTCGAATGGGCGCGCGCCGAAGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTCCGACGACTACGATCCGACCCACGGCAGGTTCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACCGCTCACCGAAACGTCACCCGTACAGCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATACATCTTGATTCCGCCATTACGGTGGATAATGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGATTTTTCGCATGATATTGTCAATACGCCGTATCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCCGCGTTAGCGCGTGCCAGCGAGTCCGAGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AACGCAAGCGCGTGAGACGCGCGATAAACAGTCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCCTTTCCGTTGTCGGTGCGGGTGAGTGATTCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTATTTGAGCATGAGCATGAGCTGGACATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACATTGATGCTGGTGCCCGCATCGGTGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGCAACCGAAATGACCACCGCATACACATGCGTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGACGAGATGGCCGACCCCGAACTCGAATCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTTCCTCCACGTGCATCTCTACCCGTGGCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCTCGAAGACCTCGGATACCCCATCTCGGACGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACCTCGCCGCCAAGGTAGCGCATGTTGTCGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTGCTTTGCCGGTTTCTTTCGCCACGTTCTGGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATACAATTCGGATACAACGAAAACGGAATATATAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGACTTGCGCAACGCATAAGACTCATAGTTTACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCCCCGATTAATCACGTTGGACACCTGCGCATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTACGGTGCTGCCCCAATAGAGATTCTCCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTGACATTGGTCTACTCCTTTACTGTTATTTAGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATACCAACGCTATTGCGATGGCTTCGTTATGGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACTGCCGGGGTAGTTTTGACTGCCGAACCTCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGTTGCCACGCCCTGCTGTTCCATCTCGTGAAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCGTTTCGCCACAGCCCCCCCTTGTAAGTATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GAGACTCAAAAGCCCCTCTCAGCATTATGCCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGATCGAATAATGGATGGCCGCAACGCCGACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCTGCTGCTACCCAGCAGGCGGGCGATATCCTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAAATTCGGACAGTTTCTACGCGAATATGATGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAACATCAAGGGTCTGCTCTCCCGCGACATCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATAAACCTCGTGAAAACGGTGGAACCCCTACGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAAAGTCCATTGATAGCCGTTCTTCAGCATCATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCCATCCAGCCCAACGTCTACCAGACCGGCGAAGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGTGGTGAGGATGGCTTGCACGCCATTCATATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACATCACCACGGCGACGGCGGCGGCGAACAATGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCACGCTGTTCGGCGTGTCCGGCAAGAAGCAGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCAAACGTTCCGATGACATGACGCAAAAAATACT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTTCGTCGGTGTCACTTAATTGTTGATATACGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGTCACGTTGAGCGCGTTATACTGCGTTGAGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGCTGAATATCGCGTTGTCACGGTTCAAGTGGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGCTCATGCCCAAGTCCATGATGGCCTTGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGAAGTTCAGCAACCAGTTCAACAACGTCGCGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCATCCGATGATAATCATTCTTGTCCAATGGTGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGAGCGTGGTGTGACCGGCGTTGCGCATGGCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

>NZ_CP021388|3|1|1701249-1705540|CRT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTCGCGCGCGATACCCTCAGGGATGGAATCGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATCGGTATCCGCTTGTAATGTTTTCACGAACTTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGGAAAACCAACACTGCCGATTACACTCACAATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATGGCGCAGGGCGCACGGCCCGAGACACGGGAATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGGCACTGGCTCGCCGTTGACGTTCAATGGCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCGATATGGTCACGGATAGACTGCAACACCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCATCAGCATGTTCTTCGGAATCATCATCACCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CATCTGCCGTCCTGCGGTGTCCTCGCTCAGGTAGGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCGCGTGCCCCACGGTGCGGCATTGCTGCCGAGTTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGGTGGTTTCGTCCATGCCTTGGATGGGGCCGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGTTACGCTGTCGCGTGTAATCGGAGTATCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTCGCGTTTGATTTGGGTGAGGTCCTTGCCGTATTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGACAACAACGTGTTGACTCCGGATTTCAAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTAATCGGTGTCCGCCCGCAACATTTTGAC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACGTAGATGATGGTGCGCACGGTCGCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGGCGATATGTTCCACCGCTTTTTCGATGACCGGGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCTATTTTATTGGTTGTCCGAAATTCATAATCAGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGCACGCACACGCTCGAATGGGCGCGCGCCGAAGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTGTCCGACGACTACGATCCGACCCACGGCAGGTTCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CACCGCTCACCGAAACGTCACCCGTACAGCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GATACATCTTGATTCCGCCATTACGGTGGATAATGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TTGATTTTTCGCATGATATTGTCAATACGCCGTATCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGGCCGCGTTAGCGCGTGCCAGCGAGTCCGAGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AACGCAAGCGCGTGAGACGCGCGATAAACAGTCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCCTTTCCGTTGTCGGTGCGGGTGAGTGATTCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGCGTATTTGAGCATGAGCATGAGCTGGACATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTCACGACATTGATGCTGGTGCCCGCATCGGTGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGCAACCGAAATGACCACCGCATACACATGCGTA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGACGAGATGGCCGACCCCGAACTCGAATCGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAGTTCCTCCACGTGCATCTCTACCCGTGGCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCTCGAAGACCTCGGATACCCCATCTCGGACGAG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACCTCGCCGCCAAGGTAGCGCATGTTGTCGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTGCTTTGCCGGTTTCTTTCGCCACGTTCTGGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ATACAATTCGGATACAACGAAAACGGAATATATAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGACTTGCGCAACGCATAAGACTCATAGTTTACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCCCCGATTAATCACGTTGGACACCTGCGCATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGTACGGTGCTGCCCCAATAGAGATTCTCCTTCTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTTGACATTGGTCTACTCCTTTACTGTTATTTAGCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATACCAACGCTATTGCGATGGCTTCGTTATGGTG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GTGACTGCCGGGGTAGTTTTGACTGCCGAACCTCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AGGTTGCCACGCCCTGCTGTTCCATCTCGTGAAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGCGTTTCGCCACAGCCCCCCCTTGTAAGTATG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GAGACTCAAAAGCCCCTCTCAGCATTATGCCGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGTATCGGTTACGATACGTTCGGCATGCGCCAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GGATCGAATAATGGATGGCCGCAACGCCGACCG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCTGCTGCTACCCAGCAGGCGGGCGATATCCTC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAAATTCGGACAGTTTCTACGCGAATATGATGA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGAACATCAAGGGTCTGCTCTCCCGCGACATCCA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TATAAACCTCGTGAAAACGGTGGAACCCCTACGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AAAAGTCCATTGATAGCCGTTCTTCAGCATCATA
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	GCCATCCAGCCCAACGTCTACCAGACCGGCGAAGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGTGGTGAGGATGGCTTGCACGCCATTCATATC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACATCACCACGGCGACGGCGGCGGCGAACAATGC
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCACGCTGTTCGGCGTGTCCGGCAAGAAGCAGGT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CTCAAACGTTCCGATGACATGACGCAAAAAATACT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	ACTTCGTCGGTGTCACTTAATTGTTGATATACGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGGTCACGTTGAGCGCGTTATACTGCGTTGAGGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	AATGCTGAATATCGCGTTGTCACGGTTCAAGTGGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TCGCTCATGCCCAAGTCCATGATGGCCTTGTT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	TGAAGTTCAGCAACCAGTTCAACAACGTCGCGCT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CGCATCCGATGATAATCATTCTTGTCCAATGGTGG
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC	CCGAGCGTGGTGTGACCGGCGTTGCGCATGGCGAT
ATTTCAATCCACGCTCCCCGGATGGGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021388.1\|WP_052789435.1\|1697643_1698498_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP021388.1\|WP_003830251.1\|1695668_1695953_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP021388.1\|WP_003832943.1\|1692330_1693344_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP021388.1\|WP_003833379.1\|1708434_1709130_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP021388.1\|WP_051994509.1\|1710180_1711947_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP021388.1\|WP_003833378.1\|1709255_1710188_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP021388.1\|WP_014483316.1\|1698773_1699559_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP021388.1\|WP_100218471.1\|1688227_1688980_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP021388.1\|WP_003832945.1\|1691486_1692191_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319790
NZ_CP021388.1\|WP_074525147.1\|1693639_1695502_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP021388.1\|WP_003832947.1\|1689027_1691337_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|237844
NZ_CP021388.1\|WP_003833374.1\|1715428_1718737_-\|mupirocin-resistant-isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235681
NZ_CP021388.1\|WP_052792071.1\|1707406_1708438_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP021388.1\|WP_015438265.1\|1699561_1701043_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP021388.1\|WP_079287463.1\|1712884_1715287_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP021388.1\|WP_065506919.1\|1706365_1706599_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021388.1\|WP_106622661.1\|1696238_1697459_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP021388.1\|WP_025299957.1\|1719409_1720378_-\|ribokinase	unknown	unknown	gnl\|CDD\|238579
NZ_CP021388.1\|WP_003833383.1\|1707059_1707350_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP021388.1\|WP_032739753.1\|1711943_1712600_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
NZ_CP021388.1\|WP_052789435.1\|1697643_1698498_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	7.69844e-15
NZ_CP021388.1\|WP_003830251.1\|1695668_1695953_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.88678e-17
NZ_CP021388.1\|WP_003832943.1\|1692330_1693344_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	3.09461e-130
NZ_CP021388.1\|WP_003833379.1\|1708434_1709130_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	6.22077e-31
NZ_CP021388.1\|WP_051994509.1\|1710180_1711947_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	4.97416e-177
NZ_CP021388.1\|WP_003833378.1\|1709255_1710188_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	9.36927e-135
NZ_CP021388.1\|WP_014483316.1\|1698773_1699559_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.68478e-58
NZ_CP021388.1\|WP_100218471.1\|1688227_1688980_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.86556e-101
NZ_CP021388.1\|WP_003832945.1\|1691486_1692191_+\|HAD-family-phosphatase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.32725e-46
NZ_CP021388.1\|WP_074525147.1\|1693639_1695502_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP021388.1\|WP_003832947.1\|1689027_1691337_+\|primosomal-protein-N'	gnl\|CDD\|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP021388.1\|WP_003833374.1\|1715428_1718737_-\|mupirocin-resistant-isoleucine--tRNA-ligase	gnl\|CDD\|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP021388.1\|WP_052792071.1\|1707406_1708438_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.77418e-179
NZ_CP021388.1\|WP_015438265.1\|1699561_1701043_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.9484e-14
NZ_CP021388.1\|WP_079287463.1\|1712884_1715287_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22614e-50
NZ_CP021388.1\|WP_025299957.1\|1719409_1720378_-\|ribokinase	gnl\|CDD\|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	4.12076e-104
NZ_CP021388.1\|WP_106622661.1\|1696238_1697459_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP021388.1\|WP_003833383.1\|1707059_1707350_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.39737e-29
NZ_CP021388.1\|WP_032739753.1\|1711943_1712600_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.37358e-87

>NZ_CP021388.1|WP_015438265.1|1699561_1701043_-|IS21-family-transposase
MTVPVSVQQRIRVLDAHGVSWRSIAKEVGVARDTVAKYAGREDCSPKPEHSASRPSKLDPFKATVDGWLEADRFMPRKQRHTAKRVYDRLVSERGYGGAYSSVQRYVKRWREEHRLPSDGYLELEWHPGEAQVDFGMARAVVGGDRVDVHCLVVTFPYSNMRYCAALPGENAECVCAGLRTVFEHIGAVPLTLVLDNATGAGHRVAWDRVSIVKVFELFVEHYRLETRFCNPNSGNEKGSVENAVGFLRRNIMVPLLNAESYAQLTRYMLERCDAMAKETHYRKGAPIGGLFAEEKAEMQPLPSKPYDAIRWEVRKADKDGRVQVDGNHYLAGPSWRGWTLDVALRAFDVTIRTQDGRTCARLPRVYGDSPATIRDPATLLPALGRKTNAWPDSTIRDDFPDKLRLAIDRMDAKARRNAFRLISRTSDACGFEPAVEAGEHLVEQGHPLDEASLTTMARRIASGEKPYEQTAPDLTGYDVFMQPRGTRERKEA
>NZ_CP021388.1|WP_014483316.1|1698773_1699559_-|ATP-binding-protein
MGIHRPPVVMPDMKRRRASTGEKIETIMNLARRLPLTRQILADQLANATPTQMEFVEEWMNAELESRERSKRSRLLKQAGFPADKELDGYDWTPIRFPVDYGRQRIESLEFISGHEDLVLFGPPGTGKTHLAIALGRNACRRGMPVRYHTAASLVMRLLRAQTDNRLDRELAMIGRTPLLIIDELGYVPIDEEGSRLLFQVVTNAYETQSIIYTTNIEFSGWGRIFGDPNMAAAIIDRTVHHGRMIRFEGESWRKTHALMQ
>NZ_CP021388.1|WP_052789435.1|1697643_1698498_+|Fic-family-protein
MERVRLVDWLKSERDQHVGGGLYYNSQILFAYNSNHMEGSTLSPEQTAQLFNTGALLPDNINDEIRADDVAETTNHFNAFNWVLDHVDDPVNKSLVCSLHGILKRGTSQEFDANRNVGGYKIVPNVISQLEGIHTVLPADVPLAMKQVFSLYSQLEDDPFAIAKAHWMFESTHPFSDGNGRIGRLVMFKELLRLDSVPALVLDEHHNLYTRALKNFPNEPGYLVDLLLNERDYYQRMIETYAPNRIRYSYVDQWNQADIVTPITNPYIKDRWDDTDINQRINPA
>NZ_CP021388.1|WP_106622661.1|1696238_1697459_+|methionine-adenosyltransferase
MTEEHRLISAESVTEGHPDKVCDQISDAILDDLLAQDPSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGAQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGKVPHLRPDGKTQVTIEYDDNDQPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFVLGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHKVEIQIAYAIGVADPVSINVETFGTEQGVTRGQIAAAVRKVFDLRPAAIIDELDLKRPIYLKTAAYGHFGRTDVEFPWEKTDKVEELKAAIAGE
>NZ_CP021388.1|WP_003830251.1|1695668_1695953_+|DNA-directed-RNA-polymerase-subunit-omega
MAFGTDPTPDGLANPPIDDLMQHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNNEKPLSIAFREIDEGLLEETLGEDDTNEGN
>NZ_CP021388.1|WP_074525147.1|1693639_1695502_-|dihydroxy-acid-dehydratase
MTEMRSAKIMSGRVFAGARALYRAAGVSGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIREAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADGTVKSTDLIDVMYATADDSVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAQQVVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVPCICKASPSGKWEISDVHRAGGITGILGELERAGKLHTNVHSIDYPTLEAKLADWDIMRPTCTEEAKQMYKAAPGHIISPEPWTHTTLFDSLDRDRVNGAIHDIDHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGYVAHRDRHVSQALKAYAAFARSADKGATRDPELINKLSGLA
>NZ_CP021388.1|WP_003832943.1|1692330_1693344_+|methionyl-tRNA-formyltransferase
MLKLVFAGTPDVAVPSLQAFAADSRFEVVGVITRPDAPTGRGRKLTPSPVKAAAVELGLTVIDTKPRSPEFMEALKGLHADIAAVIAYGNILPKSVLDAVPMGWYNLHFSNLPKWRGAAPAQRAIWNGDPTTGADVFKVGEGLDDGPIIASLTIELTGRETSGELLARLAEEGAPMYVDALAAVGSGTAVFTPQPAEGLEYAHKITVEDARINWADPAEAIDRQIRACTPHPGAWTELFAEGLIADSGEANEESSNLATTAKSLTLHILAAQPADQMNPNTPIDLDPGELKVGKKNVWVGTGTGALELTQVKAQGKKAMRAADWARGARLSPAACVR
>NZ_CP021388.1|WP_003832945.1|1691486_1692191_+|HAD-family-phosphatase
MKGWPGEPDMDYDVLVADGEAAANAGKPITDVIFDFGNVLIYWDPAAVLIPRYSQKTIDEFLDNDISGFYDVNDLMDGGTSTEEAIAIMRERKGDKWADILDYYIKNFRDSLTGIVPGARVLVDDLKAAGIGVWGLSNWEASLFHVAEEQCDILQKLDGKLVSGFVKLRKPHKEIYDAALKEFGIKADGALFIDDKAMNIVGSNAAGIRGVRFQDPVKLRELLIANGVNIPDVQ
>NZ_CP021388.1|WP_003832947.1|1689027_1691337_+|primosomal-protein-N'
MTTSDAQQLTFDGLAPRKRRKRAPAEHTPAEHDPIAQVVLDVQALHLGQTFDYFIDEKDSDAAQPGVLVRVRFGGQRVGGVIWSRTSTSDTPRSSIRYIERVLSPDVLVPASMREDIGLIANAYGGTRANILRFAVPPRVAKVEAEQRLTASFRRPVGGSLPDNVQGGFAGRGTLPDGTRPSGSSFEVADSVSEGAAQAYRRIVANYGEANVLNDALHGQRFQSFVFDLLSGAQEWQRNMAWMVATALSAGKPSVVELPTMREVEDLLPMLRNYGLKPFSPTPSGSWIGDVAVLNAQMPAADRYRAYLAVALGQVKVIIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHGGVFVAMANARTVQSQWENTGPGTVETPVSGYSTAIHPLASPLKDATPWVRWLNRDELARLADATIGARVPHTAVRVLSKALESGPVLLSIPQDSTSEALSCAKCHRQARCAKCSGPLQLPADRSESAPRCQWCGAAAIHWICPGCGHERMRVVRVGAAGTAAELAGLFRSVPMVLSSKAQGLVRDVPCKPMIVIATPGFEPRVRPVSNERGAAGHEYRAVAILDAWTSLYALGVDARLDTLTAWMRAVSLCAPRSRGGQALILGETDPAIAQSLMMWDSRILASKDLDERMETGMPPTVAAACVWGRRDAVMTLMQRIGALGGDWAVCGELPGMLGPVPIAQPDTVDARELEATADRVKAVVRVPQSQRAELAIRLHRETARHVASREPGELRFRIDPKDLI
>NZ_CP021388.1|WP_100218471.1|1688227_1688980_+|phosphoserine-phosphatase-SerB
MSQGFSRIESMMQEDVHFIDKSAESEVGALGGSADSVPTLAEPGLLVMDVDSTLIDEEVIDELGEAAGSGEEIAKVTERAMRGELEFCDALRARVALLKGLPVSVFDAVHDKLHFTKGALELIDTLHAHGWKVGVVSGGFHEVVDKLAAEGHIDYWIANRLEVADGRLTGKVLGEIVCKTVKLHALREWAKQLDIPMSQTVAVGDGANDIPMIQAASLGIAFCAKPKTQLAADEAINDRDLMHVLDYLRR
>NZ_CP021388.1|WP_065506919.1|1706365_1706599_-|hypothetical-protein
MTMVESLPTYSSAEAEARSKGDNLISMINVYLAGYAAAGTPVDVETTGKTLHALPTDTVLRTDADFDAFEHEVLGDD
>NZ_CP021388.1|WP_003833383.1|1707059_1707350_-|CRISPR-associated-endonuclease-Cas2
MMVVVAYDVNTETPDGKRRLRSVAKTCMKYGQRVQNSVFECSVTPSDYLILKHDLAEIMDEMCDSLRYYNLGSKYASKIEHRGRQRHVPVDGVMML
>NZ_CP021388.1|WP_052792071.1|1707406_1708438_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYVTSEDAYLSLKNDNVIVQQGDATLGQIPLRSLESIVSFSYKGASPALMGRCSEFGVGLSFFSPHGRYYCSILGEKNRNVLLRREQFRFADDDGAALSFARSFIIGKIYNSRWVLERTKRDHALRINSERIAEQSEKLRQSLLGIRDCTSIDELRGVEGLAAKDYFFVFDDLILRNKDAFFFEQRSRRPPLDRANALMSFVYSILTSDCVAALQGVGLDPYVGFLHTDRPGRASLALDLVEEFRPAIADRFVLTLINTGVIKPSQFEVRENGGVFLSEGGRKTVLAAWQKRKQETITHPFFGEKIPWGLVPHVQALLLNRAIRGDLDAYPPFMWK
>NZ_CP021388.1|WP_003833379.1|1708434_1709130_-|CRISPR-associated-protein-Cas4
MHTQSEYPEDDWLALSGLQHFAFCRRQWALIHIEQQWRDNYLTTAGSLEHDRAHDYGASEARGDLLIMRDLRVFSRRLGITGACDIVEFRQSDVGVPLHGRAGTWLPYPVEYKHGAPKQADADRLQLCAEAMCLEEMLACSIPEGALFYQQTRHRERVRFDESLRDQIVTMSGEMHDLFARGHTPNVKPSKSCRACSLLDICLPKLAGSRSAEQFIDEVMRAEAAEQENRT
>NZ_CP021388.1|WP_003833378.1|1709255_1710188_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTDRKPIENRYDFTILFDVKDGNPNGDPDSGNMPRVDIETGNGLTTDVCIKRKIRDYVQTVMGEQAPWRIYIQNRQTLNRLDSEALKAEHIGASLESKDFAKEIKALKKTDPELDRRLRDYMCDQFFDIRTFGAVMTTFVKGSLSCGQVRGPVQLGFARSIDPISVQEISITRIAVTTEADAAEKNNTMGNKFIIPYGLYRMNGYISAKLAQNVTGFCDEDLDVLWQAILNMFEFDRSAARGNMAVRKLYVFKHSSALGDAPSWKLFDSINVHKRAEVDAPRDFADYEVRVNREAIPESVSLTEMVDHAL
>NZ_CP021388.1|WP_051994509.1|1710180_1711947_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MIIGDLCDEYAVLVSQNKAPAYGYDNTNVPYGLVVDDDGTLIRVRPLGDFSGKKPVNIIPVPARFPRSSGIVANFLCDNVTYLLGCDTKGNAKRAAQAFQACSELHRRILDGVKDRAASAVCAFFSKAPQWQTAQRLMGDEAWKSSVTMNFALEYDDGGRTIFIGELPSIREAWDAYYGRVDDADESALVSSLVSGERIVSEKVHPKIKGVAGAQSSGASLISFNAPAFCSHGAEQNENAPMSKREAYEYTTALNTLLADRDRVQRIGGDTVVSWANCGDNAYRDVWDQYMGQSGGLSEKVVVDATRALAQGKPYDYEGIHLSPDEQFHILALSPNAARLSVRFYLTDTFGAFARNIDRHYRDTAIRRPVYDSTTSLPTWRLLNQTIRTQSKTAKVSPQMAGAVMKAILEDTPYPMTLINAVERRINAEHDISPDKAAIIKAYYLRATTNAQFKEVLRMDINEESDYLPYVLGRMFSIYEQIQLAAIPGINTTIKDKYFTSASATPARIFPILGDLAAKHMRKTWKSEGLKVKLDKALGELTGRVGDRYPSRLSLEERGAFQLGYYFEKQKRFDKANKNNNEQEENND
>NZ_CP021388.1|WP_032739753.1|1711943_1712600_-|type-I-C-CRISPR-associated-protein-Cas5
MSIRLEVWGENALFSRSEFKTERVTYDVMTPSAARGILEAIFWHPGMRWRIDRIHVLNPIRFDSIRRNEVDSVINIGKIRTMAEGRGDGGAIYTAESIQQRSSTILRDVRYVIDAHFELNRAKMSSTDSAEKFQSMFMRRAAKGQCFHHPYFGTREFPVEFQLWQESSDPVGFEHGHRDLGYMLYDFDYRNPAHPAPLFFRAELDDGVLDVESVEVRS
>NZ_CP021388.1|WP_079287463.1|1712884_1715287_-|CRISPR-associated-helicase/endonuclease-Cas3
MCATYYARTSDHGYETCAEHLAMAGCLAGGFAKGFGYLDDGLLAGLVHDLGKYSDAFQRRIRNPDHCGPVDHSTAGALLLMRYACPLAAMAVAGHHAGLPDLGSYGELEGPTFMSRMNRARRAGDCNPLALAQAGETQLNIPQPAFLHGTRSAKPTTSGKRSERWSLYTDMMLTRMLFSALVDADRLDAEFFTSNRIDRAEHHILESLKKHLGPQNLASGRVPAFDALREASLTVSVERDAEDRSRIDRLAAIMENTADGYLAAPDKRPIDIRRCELLERCLDCGKDPSYGTGLYTLTAPTGSGKTISSIAFALEHARTNNLRRVIYVIPYTSIIDQTVGQFEAIFGMDAVLPHYSEAPYQLKNESDMDEMDLRRVLAAENWNAPIVVTTAVQFFESLYSNATSRCRKLHNIADSVIVFDEAQTLPVPYLRPCVRAIAELVERYGSTAVLCTATQPELQPLFDESFDGDHVRVPEISPFTRDDRDSFRRVTIERLGDIALDALAERLGNHKQVLCVVNTRSKAQYLHDRLAEDDAEGSFCLTTLQCAADRQRLFAEIRDRLDAGASCRVVSTSLIEAGVDVDFPIAYREEAGLDSVIQTAGRCNREGRRSASESVVHVFSTEGGCAPFLRQNIAAFRAVADRHADLNTDEAVRAYFAEVLCLRSGGVARANVGNDALDRKRILPLHGRDANWPFADIAKRFRLIDTPTIPVYIPLPGDGALLCERLERGDMDRTLFRKLGRYAVNVWPRHLEQLKSVGAVSTVGSGKNDEEDCFVLRDMGLYSSRLGLRLDGATADGIFV
>NZ_CP021388.1|WP_003833374.1|1715428_1718737_-|mupirocin-resistant-isoleucine--tRNA-ligase
MSENVYPKANEGGETAHVAPNPSFPQMEETVLNYWDKDDTFQKSVERNPSGDHSQNEFVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVDQIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVDFEHGYKTLNIPYMESVMWAFKQLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKMRDEEDAYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGKFAGKKFYFGKPLLEHYTKELGENYEVVRELKGSELAGRRYYPVFPYFAGEKAETEGNVPGPNGYTIFTADYVDTVEGTGLVHQAPYGEDDMNTLNAHGVKSTDVLDAGCRFTSQCPEYEGMYVFDANLPILRNLRAGDGPLAEIPEDQRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKPRLLELNQQINWIPENVKDGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLEELKADFGDYPRDKDGNVNMHRPWIDNLTRVNPDDPIGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQHFPADYIVEYIGQTRGWFYLLHVMATALFDRPAFKNVICHGIVLGSDGQKMSKHLRNYPDVNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAANGGAGFDARQLRADEVAGLPQMDRYLLARTRRLVERVEKSLNEFAISDACDAVSDFIDVLTNWYIRNTRDRFWNEDATAFNTLYTVLEAFMRVLAPLAPMEAESVWRGLTGGESVHLADWPYVVDEKTGADTELGRVLVDDPVLVAAMEKVREVVSGTLSLRKSAKIRVRQPLAKLTVVAEDVDAVKAYDELLKSELNVKDIEFCTMEDAGSQGLKIVHELRVNARAAGPRLGKQVQFAIKASKSGDWSVNASGAPVVSTPSGDLELVEGEYELINRVEEENAAEAAASVSAALPTGGFVILDTALDDDLLAEGYARDAIRAVQDARKAADLDIADRISLVLTVPAADVAKVEQFKDLIAHETLATSFEVKEGAELGVEVAKA
>NZ_CP021388.1|WP_025299957.1|1719409_1720378_-|ribokinase
MSASCLDLLDHLHGSVSVVGSMNVDYTVVTERLPKPGETVNGGPLTLLPGGKSANQASAAARIGAQVRMFGAVGEDANADFLLEHLRDAGVDTSHIAAVAGPSGTTVITVDANGENTIVYSAGSNGEVSVDYVRQSSDALVAADVLGLCLESPMETVTACARLCHDAGLKVLLNDSPFVAELPAELIEASDILLVNEHEMAQLLDIAEPDDDDWDGLDWSDVARQMHDFGFNQAVITLGGDGSVVIDGDDIYRIAPVAVEAIDTTGCGDAFMGTVLAGLASGHALADSAQLASYVSAYAATGFGAQASYGTAAQIRERFGAK

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Crispr_ID: NZ_CP021388_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021388_4

2093767-2093913

Orphan

Consensus_repeat	Method
AATCTCCTAAAATCCTGTCACTAAG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021388_4

>merge|NZ_CP021388|4|2093767-2093913|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAGTCAAAGCCAGTGACAGAAATTTAGGAAATCAACCCCAATCTCCTAAAATCCTGTCACTAAGACTCACTTAGCGACAGAAATTTAGGACGACTGGGATAATCTCCTAAAATCCTGTCGCTAAG

>NZ_CP021388|4|4|2093767-2093913|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAG	TCAAAGCCAGTGACAGAAATTTAGGAAATCAACCCC
AATCTCCTAAAATCCTGTCACTAAG	ACTCACTTAGCGACAGAAATTTAGGACGACTGGGAT
AATCTCCTAAAATCCTGTCGCTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021388.1\|WP_003831622.1\|2096196_2096424_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
NZ_CP021388.1\|WP_052822133.1\|2096753_2097959_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP021388.1\|WP_014484324.1\|2102730_2103039_-\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_CP021388.1\|WP_106628906.1\|2083222_2084845_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP021388.1\|WP_025300058.1\|2091140_2091998_+\|polyketide-synthase-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP021388.1\|WP_003829786.1\|2092271_2092964_-\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP021388.1\|WP_106628908.1\|2087831_2088791_-\|biotin--acetyl-CoA-carboxylase-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP021388.1\|WP_106628907.1\|2084837_2086718_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP021388.1\|WP_106628904.1\|2072077_2072302_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341042
NZ_CP021388.1\|WP_003829776.1\|2102456_2102708_-\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP021388.1\|WP_003829782.1\|2095336_2096164_-\|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP021388.1\|WP_106628911.1\|2099458_2100592_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP021388.1\|WP_106628984.1\|2103225_2106279_-\|Rne/Rng-family-ribonuclease	unknown	unknown	gnl\|CDD\|273254
NZ_CP021388.1\|WP_106628909.1\|2088962_2091062_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021388.1\|WP_014484322.1\|2098100_2099363_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213024
NZ_CP021388.1\|WP_003831625.1\|2094027_2094981_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021388.1\|WP_106628905.1\|2073700_2083183_-\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|227315
NZ_CP021388.1\|WP_003829785.1\|2092979_2093411_-\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP021388.1\|WP_106628983.1\|2087287_2087830_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP021388.1\|WP_106628912.1\|2100698_2102390_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237045

Protein	Function_ID	Function_description	E-value
NZ_CP021388.1\|WP_003831622.1\|2096196_2096424_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	4.48776e-12
NZ_CP021388.1\|WP_052822133.1\|2096753_2097959_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP021388.1\|WP_014484324.1\|2102730_2103039_-\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	4.17736e-35
NZ_CP021388.1\|WP_106628906.1\|2083222_2084845_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP021388.1\|WP_025300058.1\|2091140_2091998_+\|polyketide-synthase-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.77745e-16
NZ_CP021388.1\|WP_003829786.1\|2092271_2092964_-\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.72993e-143
NZ_CP021388.1\|WP_106628908.1\|2087831_2088791_-\|biotin--acetyl-CoA-carboxylase-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	2.50921e-31
NZ_CP021388.1\|WP_106628907.1\|2084837_2086718_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP021388.1\|WP_106628904.1\|2072077_2072302_-\|hypothetical-protein	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00211547
NZ_CP021388.1\|WP_003829776.1\|2102456_2102708_-\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	5.68869e-49
NZ_CP021388.1\|WP_106628912.1\|2100698_2102390_-\|GTPase-ObgE	gnl\|CDD\|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NZ_CP021388.1\|WP_106628911.1\|2099458_2100592_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	3.1332e-174
NZ_CP021388.1\|WP_106628984.1\|2103225_2106279_-\|Rne/Rng-family-ribonuclease	gnl\|CDD\|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	2.60271e-152
NZ_CP021388.1\|WP_014484322.1\|2098100_2099363_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213024	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins. This family contains an uncharacterized protein yadE from Escherichia coli and its bacterial homologs. Although its molecular function remains unknown, yadE shows high sequence similarity with the catalytic NodB homology domain of outer membrane lipoprotein PgaB and the surface-attached protein intercellular adhesion protein IcaB. Both PgaB and IcaB are essential in bacterial biofilm formation.	9.65393e-62
NZ_CP021388.1\|WP_003829782.1\|2095336_2096164_-\|transcription-termination/antitermination-factor-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.58026e-66
NZ_CP021388.1\|WP_106628905.1\|2073700_2083183_-\|type-I-polyketide-synthase	gnl\|CDD\|227315	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein].	0
NZ_CP021388.1\|WP_003829785.1\|2092979_2093411_-\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	8.69761e-91
NZ_CP021388.1\|WP_106628983.1\|2087287_2087830_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	3.91336e-26

>NZ_CP021388.1|WP_003829785.1|2092979_2093411_-|50S-ribosomal-protein-L11
MAPKKKVSALIKLQIQAGKANPAPPLGPALGSHGVNIMDFCKAYNAQTQDKMGQVIPVEITVYEDRSFTFVLKTPPAAALLKKAAGIEKGTENPLTHKVGSVTKAQVREIAETKMEDLSARDIEAGMKIIEGTARSMGITVTD
>NZ_CP021388.1|WP_003829786.1|2092271_2092964_-|50S-ribosomal-protein-L1
MVKRSKKYREAAERVDRNNLYTANEAIALLKSMPSYNFDQTVEAVFRLSVDPRKADQLVRGTVNLPHGTGKTAKVLVFARGPKATEATEAGADIVGDDDLIAKVQGGFLDFDAVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNGNLSFLIGKMSFDESALDENFKAVADEVKRLKPSTVKGRYLTKATITSTMNPGVPVDPNTLA
>NZ_CP021388.1|WP_025300058.1|2091140_2091998_+|polyketide-synthase-regulator
MSDFLELLAADAANSSDFTDRSGISATDRARTVLFECLFNHLADDRVASLFTILGFEHDFTCYAIAGYPARSAARSRVDIEKIVADFGGTCLTAERPITGLTGADNGTGRTAVVALIRPVGAATPEIICNTIAPAFDADRPIALGSQRTGAEGAMRSVQATLYCLRAAPALAATAQSLPRPLRTDDALPERALIGDEDARDELIRVVYGSLTAAGPDDPTLLTVSTFLKYGGSLETCAKELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRMATAQ
>NZ_CP021388.1|WP_106628909.1|2088962_2091062_+|hypothetical-protein
MTSPASSLPVAAAHPRLARVGAVARWTLAALACLWLALCTAVGPLYWDFENGTIANWNWTNTAFFVLSFAIYLGLIVIMVRFAAGQRVLPRAISGRLSRAGQQHSNQALEPSQSQSVVADSNVSKRHATVASRFATLGRWITRGTNRFWKLALVFFIGWLWVPTTLLAAFGADIRSQIREFSWAWNQWTGLQQPYIGFFSFVPMDIYPTAHYMWPPDPTYLTDQHNVVLTAFYGAVAAFSRYLTGSNDAGIVALAAGQMLLAVFCCAATANRFLNRPWMGVAQSTKDKNGSSTGNVSSTTSARIAQDAAPQLAGGRARFLILAFFLCCPLAVFATISITKSPLFAFSFVWWFGIWYELTQTWKPEGKRKGLTATAPIRLPRHSFVAFVLSTAVMLISAKYAWYIIALQIVLALIADRRRWTTYVVALLIPTMLIHGGISLAISSGAIIGGDPIESRGVQLQMIARVASRNPEGISEEAKKNLSDVFNLDQMADAYSQQDADPVKSSGIQAKKVSYKWRTVTPEDMTNFNKAWFEIVKDNPVIALDALLAKCFGYFNVTDQPYVSMDYYVTSDYVQKNSTWIKSYNHNWREQITGFTRSWGKIPVIGWITHGNFYVVMTLLIGAAEVIRRRWLTLMTHIPLLLLMGVMITAPANNFERHMLPVAFVFGFVVLTYWRESLVERRIARQAQSSASTTMTLPQ
>NZ_CP021388.1|WP_106628908.1|2087831_2088791_-|biotin--acetyl-CoA-carboxylase-ligase
MGGFVRFFARHRESGRANRGNVVPMMIALQAATPQLPRTKAVADQVVAVGETDSTNALAARMIGDGLLTLPERKGGTLAVGVVVTDWQSAGRGRNGHTWISQPGCCSTMSYAVRIPRAIATDESVNGWLQMIAGLVTLDALNGMIKEYGAAPNKQDCFLELKWPNDVFCHGLKLGGLLSELVLLPDGEADDDVVVVFGVGLNLALGASRLPTPQSTSLQLHVSGLPSFNEMRDAVAEREVEGFRERLAAFIADPHGQAEALREEMKAVCWARGRQVEAHFTDGTTLIGEAIGLNEDASLILRTEDGTDHTVRTADVGVL
>NZ_CP021388.1|WP_106628983.1|2087287_2087830_+|biotin-transporter-BioY
MVTASWKPALFAVLMWLSAAAGAIPIPGTPVPITLQTFVVMLAGLMLPWRQAGSAVAAYLAAGAVGLPVFAGGASTMALVGPSAGFLFGFLPGVIVIALLRGKANTSSASAAALTAGRYLLAALVGGVVVVYAFGFVIQSALTGVPIAAVALASMGFVAGDAIKAVVASLAAAGLSKLGR
>NZ_CP021388.1|WP_106628907.1|2084837_2086718_-|ATP-grasp-domain-containing-protein
MAHIVKKLLIANRGEIALRVVRTAKEMGISTVAVYSEQDRNSRYVDMADEAYLLSGDTYKDTYLNEDLLIDILHKTDADAVHPGYGFLSEVPSFAQKVEDAGAIWVGPHHTALVDLGDKITARRVALRAKVPPVPGLSEPVTDVRTLLDFAHTHGYPIMMKRTDGGGGHGITVVHDDEELRRFYMNHDALQGGDLKEYFIEKFVDKARHVETQSGRDSHGNFTVYSTRDCSLQRRNQKLVEEAPAPFLPEEIVSTLEEYSRRLFTTVGYVGLGTCEFMVTPNGKVYFLEVNPRLQVEHTVSEEVSGLDLVREQLNIAAGGELTRAPEPRGHSFELRITSEDPATNLTPGSGTLEKIQWPAGPGVRIDTGVEQGDTISPKFDSMMGKVIVTAQNRLDAVARVRRVLDELVIEGVPTPIPLFKEIFRNDDFTAENGHPFSVSTKWLERTYLNRTPASASSGQPASLAGAAAPAAPDKSTSETFVIEMNNRRVKLTVPLDIVENITGSARARGARRPTQPLRGAGLHNVASGAAKANDGAKSGVIASPMQAVVTRINVSEGQQVAKGDLLVVLESMKMENYVYAPAAGEVKKIFVGPADGVEAGDTLVTLDVNAGKAKAEDSKKEGGND
>NZ_CP021388.1|WP_106628906.1|2083222_2084845_-|acyl-CoA-carboxylase-subunit-beta
MTDIMDSPAVKAVTAASATNASQPPAHQPLRTAVVKAAELARAAEERARDKQHAKGKKTARERLDLLFDTGTFEEIGRFQGGNIAGGNAGAAVITGFGQVYGRKVAVYAQDFSVKGGTLGTAEGEKICRLMDMAIDLKVPIVAIVDSGGARIQEGVAALTQYGRIFRKTCEASGFVPQLSLILGPCAGGAVYCPALTDLIIMIRENSNMFVTGPDVVKASTGETISMADLGGGEVHNRVSGVAHYLGEDESDAIDYARTVLAYLPSNSESKPPVYAYAATRAERETAKRLATIVPANERQPYDMLEVIRCIVDYGEFVQVQELFGASALVGFACIDGKPVGIVANQPNVLAGILDVDSSEKVARFVRLCDAFNLPVVTLVDVPGYKPGSDQEHAGIIRRGAKVIYAYANAQVPMVTVVLRKAFGGAYIVMGSKAIGADLNFAWPSSQIAVLGAAGAVNIIHRHDLAKAKASGQDVDALRAKYIKEYETSTVNANLSLEIGQIDGMIDPEQTREVIVESLATLATKRRIKRTTKHHGNQPL
>NZ_CP021388.1|WP_106628905.1|2073700_2083183_-|type-I-polyketide-synthase
MSTFFLNRLTTEPHALAFAGQSTPWPFALADQTTDPSLDEALRGHVAAANRLLAPAAADLLATTGRPVDLFGFTPNPARLSAAADATASVEGVALTQLGALLDLEHLGYSVAAAKPVAVLGHSQGVLAVHMTRAIEAAGSIEAAGKTLDEILAVAALIGAAGTRRVRELGLNPKYGEASPMLSVKGATREQVEALVKRVNNARGPISIAVTNSDNHHVLSGHPEDLAALALETEREHKHQAKLREQKLHGGTVFNPTLEYLEVTLPFHSPLMAEAVEQTVSWAGACGFDQDRTRALAEEVLLNHVDWNARVKALFNAADPAKLWIVDLGPGNTLGKLIGNVVQGTGIGVVEATTLAERSALSTLESEPERTQNWKALAPRVIETPAGAKLVTKFSKLTGKPPVLLPGMTPTTVEPEIVAAAANAGYWAELAGGGQVTAEVFDRHIAALEDELEEGRTVEFNAMFMDRYLWNLQFGSSRIVPKKRASGAPIDGVVVSAGIPELDEAVELIKNLQADGLPYVSFKPGTVDQIRQVVRIAKAVAPTTIMIQVEGGEAGGHHSWEALDDLLSATYAEVRACDNLVLVAGGGIGTPERAADYISGQWAHAYGLPDMPVDGVLIGTAAMTAKEAHTSPEVKQMLVKTPGIPADAKSDDVFAPQAAHWVPSGKSVGGMSSGLSHLHADIYELENDSAECGRLLVRVMKHPEELDSRRKEIIEALNKTAKPYFGDLASMTYLEWAQRFAELAFPWADPTYADRFQHLLQRIEARVSDTDSGEFTSKLFAADGTSAEDAAAAGLLTRDNILADPAPALEKFALAYPQTAELKVVPADVAWFPVLVREYPKPMPFVPVIDNDLLRWWGQDQLWQSEDQRYSADSVRAIPGPISVAGITTVDEPIADILGRFENAAIERVKAEQNASESNDFAALGEAVSAEDFIRKSPNISWVGHIADNPAYGTALGDQYYEIRAFDAAAGKYDLDIHLDTYWDNDPDGGTSKHAVRDIVIPLIVEGTEPGRVPVVDRERLIPDVYAMLAATAGIGNTAITGDKLTAMPTLSVPSDEGAVTANAVTEGETAQNRPFGTATATYTLSANLGFDHEAATGAALPSTLQPSRIAPDALVGPAWPAIYTALGSVYVKGYPVIEGLLNAVHLDHLIELEVNEEDLLKHTGETITLKSWAEDYFESASGRVVTIHVTHTAADGTLLARETERFAIRGRVYSDALPADAPEFGDAEHKEIAPTPRRLLRRVKVVAPHDMTAFARTSGDFNPIHTSTRGARISGLPAPLVHGMWLSATAQHAVQALDEKGAHYEIAGWTYNMYGMVQLDDTVEISVERVGKVRHGGMTLEVTCRIDGQLVSRGTALVRAPRAAFVYPGQGIQKQGMVLDERAKSAAARDVWERADKLTRAKLGFSILGLVRDNPKELTANGVTYRHPEGLLNLTQFTQVALATVAFAQTARLREAGADIWPAYFAGHSLGEYNALSAFADVIPLETVLELVFHRGSTMHHLIERDAQGRSNYRMGALRPNQFGVDDAHVKEYVESVAKASGEFLEIVNYNLAGQQYAIAGTIAGLKALKADSARRVAAFGGKPAFMLVPGIDVPFHSTLLRKGVPEFRDKLDALLPAYIDYRGRLVDRYIPNLVASPFEMTKEFAAKILEVVPSERIKAALDDPAVWDSYAADDQKLGRLLLTELLSWQFASPVRWIETQALLFGKREQGGLGVEEYVEVGLGNAPTLANLGAKTLRLPEFAGNDTVVYNVGRDEGRVYMTDTDSLVPDDEPEETAAPVETAPAGGSAVAKLGSSAAADAAPAAAAAPAPAAPVSAAPAGAPSGAAVADLPFKASDGIGVLMAYAAKVRLDQIGSNDTTDTLTNGVSSRRNQLLMDISSELGVASVDGAAEATLDKLAQIVNKAAPNYKPFGAVLSEALRDRLRSLFGAAGVKQQYIRDRVANVWQLGEGWVASVLAALLLDTREGSSSRGGDLAKLPTAAVQNKPEADKLIDAAVEVVAQLKGVAVALPSAGGAAGGAVVDSAALDAFAEKVTGSNGVLAATARFVLNELGVAAPAPEESEDENAAVVAAVEAELGSDWPKQVAPRFDANKAILFDDRWASAREDLARAYYDNDPAALNGSFIGLGKTIAAEAQWFADKSNNDELKAAFQKAASEALESVTSDKNASRYANDIAIVTGVSPNSIAAQVVEGLLAGGATVVATSHSFKPSIKAWAKQAYREHATGNAKLWLVPANLSSYRDVDALVDWVGHEQKKTSGATTTILKPAWEPTLFFPFAAPPVHGTLADSGDLFESQARLMLWGVERAIAGFSHIGADANVQHKLHVVLPGSPNRGVFGGDGAYGEVKSAFDAIVNRARAEKVWSSRVTFAHPKIGWVRGTGLMGGNDPLVAVVERHGIHTYSTAQIAAKLLDLCTAESREQALKAPLNVDLTGGLGSEPIDIKALRTEAMADAEKEASSEKAAIEGEKPEGGAAGSTLKALPTPIVTKQAPVDLADWQNVTAKPKDEIVIVSVGELGPWGSGRTRTQAELGIHPDGTVDLSAGAVLELAWNMGLLTWADSPKPGWYDTDGNLVPEEDIAERYHDEVVARSGIRPFEEGMGDDYKDGADEEEAEVFLDHDVTFSVPIREVAAEYVKLDEAHTTIAPDEESGEWNVTRHAGSMIRVPRRATMTRTVGGQFPKGFDPTRWGIPASMVGDVDKIALWNIVTTVDAYLGAGFTPAEILESIHPSLVASTQGTGFGGMMSMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSYIGGYGNMIQPVSACATAAVSLEEGVDKIALGKADFVVTGAIDDIGVESVIGFGNMNATANSEEMYGKGIDARFFSRANDRRRGGFLESQGGGTILVTRGDIAEKLGLPVAAVVGFIHSYADGAHTSIPAPGLGALAAGMGGKDSKLVRDLAKLGVSADDIAVVSKHDTSTNANDPNESELHNTLAHAIGRTDGNPLFVISQKTLTGHAKGGACIFQVNGLTQLFKSGVIPANVSLDCVDPKLQRDDHMVWVRKPLRIGGGEDEFGRETAGRPVKAGLATSLGFGHVSGFVALVHPGAFEAAVAKADGEAALEAWRERANARLAAGQRHLEEGMMGRAALYEPIDNRRFHEDHRGYDHHEVEKAMLLNPDARLGADGYYEA
>NZ_CP021388.1|WP_106628904.1|2072077_2072302_-|hypothetical-protein
MANVAFGHLFACSGIANSTYYAGIDLGMSLGPIVGGLLYGNAPIQWFYPLSMLAMPAAWLLYAATANCVHGRTR
>NZ_CP021388.1|WP_003831625.1|2094027_2094981_+|hypothetical-protein
MKTHKEVAALLQTAQREQRCAIGDGGKLYTALRRRTKIGEVVSPYPNLFAATSYWKSLNVEQQSMHLIRALAKVHPTWTFAGLSAACVYQYEHSYSLHNGTVDIVSPKGANCGGASGLNRIYMARCSQYRCQGILVTSPARTLIDCASLPFDKALAIYDSALRLQHVTKLDVETLIVQTDCNETNVKRLLRYANPLRENGGESWTYARIRQLGFAEPLFQTEFDNPANPEMPYRVDFCWKLHDGRIIVVEYDGIAKYRDTSNPNRANLMAKFEYERQRDTNLKTQGVTSIKHLFYEDVSDLKRLNALLTAIGIPKIR
>NZ_CP021388.1|WP_003829782.1|2095336_2096164_-|transcription-termination/antitermination-factor-NusG
MSDELNLENLDAALENVDAAADEAPVADAPAEAVESAEPVAEAPVASPETVAESAEEESEVNESEQAEETDAGQKAVDEFSKSLRTLDGKWYVLHTYSGYEKRVKTNIESRVASFGMEDQIFQVEVPMEEVEKHTEKGKKVITRVRVPGYVLIRMWPDENARRVVRETEGVTGFVGPSKDPAPLSRQEVVAMMAPMIASEALKAAGDKPAAAKKRKVEVSYAVGDQVTVTDGPFATMAAVVSDVEPTTQKLTVLVSIFGRDTPVELGFHQVQKLD
>NZ_CP021388.1|WP_003831622.1|2096196_2096424_-|preprotein-translocase-subunit-SecE
MAKTSTNEKAVKPNVFMRIGLFIKQIIDELRKVVTPTAKELFFWSLAVFIFVLLLMALVTGMDFGLGKATLGIFG
>NZ_CP021388.1|WP_052822133.1|2096753_2097959_-|pyridoxal-phosphate-dependent-aminotransferase
MAQWQILSDRINTVAPSATLAVDSKAKAMKAAGLDVIGFGAGEPNFPTPANVVKAAADACLDPKNYKYTPTPGLPELREAIAAKVLRDSGYEVSADQVVVTNGGKQAVYETFQILLNDGDEVIIPTPYWTSYPEAVKLADGVPVEVFAGADVNFEPSLEALEAARTERTKAIIVNSPNNPTGAVWKPETVEVIGRWAVEHHIWIISDEIYEHLNYDDARTTYIGAAVPECRDQLLVLNGVAKTYAMPGWRVGWMVAPAEVAKAATKLQGHMTSNVANISQRAALAAVSGPLDEVYEMRKAFDVRRRAIVAALNDIEGVYCPTPTGAFYAFADITALLGKPLGSNGTVCATSADFAAALLDEAHVAAVPGEAFGAPGYLRFSYALADDDLAEGMKRFKDWAK
>NZ_CP021388.1|WP_014484322.1|2098100_2099363_+|polysaccharide-deacetylase-family-protein
MAKHHESHGSRGTRRSTVEPRVAYSRHAETHSAHGSQLHYGQHASHRSAAAIAAQHTRRIAVLVVAAVVAVALAITVGVIAHGWFARQSAPSMQQQLPTTAHKSLTRKTVPQLDPGNIVIGVNGSETTYVLKGEQYVEGGAHAIEPEDGVLTGNIVTTGTVDTNTPGDYTVQYTVHDSTGHEASATRTVKVVDTMDKQTGGIPVLMYHYVYDPANPPADVDANWIPTTSLEPQLQYLTQNNFYYPSWPEVRAFIDGKHSLPKNSIVMTFDDGEPHFFQYGTPLLAKYKVPATSFIIGADGEALNKMKTYATPYLEYESHSFDMHRAGGTVGHGGRISAMSHQEIVDDLKQSEQVTGSLQAFAYPFGDTTPDAIEAVRETGTLAAFTTQYGWADVGADPMNLPRVRIQGTGSLDTFIAVIQ
>NZ_CP021388.1|WP_106628911.1|2099458_2100592_-|glutamate-5-kinase
MSTPSQAEVRRMIAAAGTIVVKVGSSSLTQPSGHLAPDKLDALAAALAQVRLMGARVVLVSSGAIAAGFGPLGFDERPADVATQQATAAVGQGLLMARYEAAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIRFGDNDRLSALVANLVRAEALVLLTDVDALYTAPPAQPGSRRVEYVPNVIDALGDIRVSGSGSKVGTGGMVTKLEAARVAAVSGIPTVLTCTSNAGPAMMGDPVGTVFAPVKARGSSRRLWIGFAAEPRGTIVVDAGAAKAIRGGRASLLAAGALDVHGDFSAGDPVWIDDESGTHLARGLAGFDSEEIPQTLGRNTAQLKRFLGDQYAHPLVHRDNLVLV
>NZ_CP021388.1|WP_106628912.1|2100698_2102390_-|GTPase-ObgE
MSDFVDRVTVHVRGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFMPHRTAGNGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKTKHPGEQLADLRHEGDRVVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSSLIAAMSAAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHIERTEIIAHVIDCATLEPDRDPMSDYQALENELALYADKLELPLGAIPIPERPRIVILNKIDVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALSELVHEMREEVASREEAEEEARVVIKPLERTGRRPRRADEGGNALDFTVERRELGNGEVFYEVRGAKPERWVMQTNFDNDEAVGYLADRLAKLGVEDELRHKGARPGDEIRIGRGDRMVEFDWDPTISAGAEMLDGSNLGARGKDLRLEEQDPRAHRRSNAERRAQYHEMMDARAAVRDAMMAERKAGHWADPTVDDDRHDETSLFGHGESADDSASEE
>NZ_CP021388.1|WP_003829776.1|2102456_2102708_-|50S-ribosomal-protein-L27
MAHKKGASSSRNGRDSSPQYLGVKKFGGEAVVAGNIIVRQRGTNFHAGQNVGMGKDHTLFALADGSVKFGVRRDRKVVDVIAA
>NZ_CP021388.1|WP_014484324.1|2102730_2103039_-|50S-ribosomal-protein-L21
MYAIVKAGGHQEKVEVGDTILVNRLDAKKGDTVEFPVALLVDGAKVTLAAADLAKVSVKAEVVNDEAKGPKINIQKYKNKTGVARRKGHRQPLTIVKITAIA
>NZ_CP021388.1|WP_106628984.1|2103225_2106279_-|Rne/Rng-family-ribonuclease
MPTENREGFVGDETDNSTVSNTESQASGASEPNAEASQPTRRRRGGRRVVRGTGAAGASLELQVQEHAAPLFEAPALSDADASASAETTDNNASDDEKHPARRTRSRRSADNADYEDRSTRRRAVADDDDVPRPVRRRRTVSDDLEEDDERPIRRRRVASDDFDEDNDRLVRRRRSVIDDLEDDDAPRSSRRRTAIDDSDEDGDRPVRRRRSTTNDRDDEPRSARRTRSRRSSEDAREENPDERVLDVIDALPVGHESARRGKPMTSLLFQEPVLPDMRHDDRDDEEDDGEQRSRSSRRSRAREDEADYEERPSRSRRSNRSDHGDHDDHDDRDDSRNNRRRNETQDDFDADDQSDSRRSRRSRRLNAQERRAAAEVEQIEEDLELDDITYSPIAEEENDEESDSTRTRSRRRRRRGSRNESGASNNDSESSENNGDDSRRRRDDRDERDRDDDEEQTVTRRRRRRRGGKNAESGDEQDDQQLTRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRENVDRLMVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVEGDKVYDRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQPTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTEEE

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Crispr_ID: NZ_CP021388_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021388_5

2261168-2261244

Orphan

Consensus_repeat	Method
GCAAATCCCCCAACCAATCGAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021388_5

>merge|NZ_CP021388|5|2261168-2261244|CRISPRCasFinder
GCAAATCCCCCAACCAATCGAAGAACCACCCCGTCCACGGACCCTCAACGGGGCAAATCCCCCAACCAACCGAAGAA

>NZ_CP021388|5|5|2261168-2261244|CRISPRCasFinder
GCAAATCCCCCAACCAATCGAAGAA	CCACCCCGTCCACGGACCCTCAACGGG
GCAAATCCCCCAACCAACCGAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021388.1\|WP_106628943.1\|2256422_2260181_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP021388.1\|WP_015439323.1\|2261374_2262847_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP021388.1\|WP_052788289.1\|2251146_2253015_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP021388.1\|WP_014484412.1\|2269471_2269849_+\|DUF4235-domain-containing-protein	unknown	unknown	gnl\|CDD\|379422
NZ_CP021388.1\|WP_019727591.1\|2253198_2253720_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP021388.1\|WP_100199007.1\|2268686_2269385_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP021388.1\|WP_015439324.1\|2262898_2263504_-\|DUF624-domain-containing-protein	unknown	unknown	gnl\|CDD\|377412
NZ_CP021388.1\|WP_003832393.1\|2260190_2260892_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP021388.1\|WP_032734693.1\|2244566_2244914_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021388.1\|WP_042994364.1\|2249185_2251015_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP021388.1\|WP_015439325.1\|2265721_2266738_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP021388.1\|WP_106628942.1\|2248235_2249177_+\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|376782
NZ_CP021388.1\|WP_106621147.1\|2266945_2268274_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|379175
NZ_CP021388.1\|WP_106628941.1\|2246712_2248131_-\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP021388.1\|WP_003829602.1\|2263654_2264497_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP021388.1\|WP_014484406.1\|2254645_2256169_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP021388.1\|WP_014484409.1\|2264496_2265351_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP021388.1\|WP_106628945.1\|2273622_2275962_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_CP021388.1\|WP_106628940.1\|2245033_2246083_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223390
NZ_CP021388.1\|WP_106628944.1\|2270878_2273626_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428

Protein	Function_ID	Function_description	E-value
NZ_CP021388.1\|WP_106628943.1\|2256422_2260181_-\|FtsX-like-permease-family-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	1.91956e-20
NZ_CP021388.1\|WP_015439323.1\|2261374_2262847_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0
NZ_CP021388.1\|WP_052788289.1\|2251146_2253015_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.33136e-142
NZ_CP021388.1\|WP_014484412.1\|2269471_2269849_+\|DUF4235-domain-containing-protein	gnl\|CDD\|379422	pfam14019, DUF4235, Protein of unknown function (DUF4235). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 88 and 119 amino acids in length.	3.00217e-11
NZ_CP021388.1\|WP_019727591.1\|2253198_2253720_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.67897e-15
NZ_CP021388.1\|WP_100199007.1\|2268686_2269385_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.05315e-50
NZ_CP021388.1\|WP_042994364.1\|2249185_2251015_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.74447e-179
NZ_CP021388.1\|WP_003832393.1\|2260190_2260892_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.37552e-99
NZ_CP021388.1\|WP_015439324.1\|2262898_2263504_-\|DUF624-domain-containing-protein	gnl\|CDD\|377412	pfam04854, DUF624, Protein of unknown function, DUF624. This family includes several uncharacterized bacterial proteins.	1.2616e-07
NZ_CP021388.1\|WP_015439325.1\|2265721_2266738_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.61006e-78
NZ_CP021388.1\|WP_106628942.1\|2248235_2249177_+\|FAD:protein-FMN-transferase	gnl\|CDD\|376782	pfam02424, ApbE, ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. It acts as an FAD:protein FMN-transferase, catalyzing the attachment of an FMN residue to a threonine residue of a protein via a phosphoester bond in such bacterial flavoproteins.	3.24605e-23
NZ_CP021388.1\|WP_106621147.1\|2266945_2268274_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|379175	pfam13416, SBP_bac_8, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	3.43849e-34
NZ_CP021388.1\|WP_106628941.1\|2246712_2248131_-\|sodium:solute-symporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.35204e-44
NZ_CP021388.1\|WP_003829602.1\|2263654_2264497_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.68174e-62
NZ_CP021388.1\|WP_014484406.1\|2254645_2256169_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	4.24587e-155
NZ_CP021388.1\|WP_014484409.1\|2264496_2265351_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.2199e-52
NZ_CP021388.1\|WP_106628945.1\|2273622_2275962_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	2.38103e-88
NZ_CP021388.1\|WP_106628940.1\|2245033_2246083_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	6.19457e-106
NZ_CP021388.1\|WP_106628944.1\|2270878_2273626_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	6.14195e-89

>NZ_CP021388.1|WP_003832393.1|2260190_2260892_-|ABC-transporter-ATP-binding-protein
MAYIEFDKVVKEYPSGGTSIRALDEASFTADQGELTVILGQSGAGKTTALNILGGMDTATSGRVVVGERDITGLRKRDLITYRRNDVGFVFQFYNLVPNLTALENVELASQICPDHFDPAETLRKVGLGERMNNFPGQLSGGEQQRVSIARAIAKKPKLLLCDEPTGALDYETGKEVLQLLQDICHDEGMTVMIITHNSALAPMAHKVIHFRSGTVTSEEINTAPQPIADIEW
>NZ_CP021388.1|WP_106628943.1|2256422_2260181_-|FtsX-like-permease-family-protein
MATARHSHTGFPGGRPVKHLVKQRSQSVKRPVKQSESDDRGSSVSAVFVKDALRCWLRSWKRFVSIAVITLLGVAVLTGIYAGCRDAFLAASRFYDQQGLHDLQVLSTYGLTGDDVAALRRVEGVETVQPERSQTVTATVKGTKKTVTMQEIGTEGLDQPYLQQGDMPSKAGEVAVTQQFLNDSGLEIGDDLTVTPRSASSTVLVGAEDKSNSGSSKSSDGDTGTVGAAEDATTSNNEKEQSPQFPTELTITAVVLDPSDLNNPAGYSGMTAFRSTSSEDYVFFAPSDGVTGNVYTAISIAVAGASQYDTFSDDYDAAIKTVADRIESQIQTQRQKARRQQIVTSAQNTLDAAKADALKQLDEGQQQIDSNRAELEANETKLAESRTQLEQNKASITDGERQIAEGRAQIASARQQIAQGRQQIADARAQLESGKAQLTSARQQLDAARAELTANRSKVEQGIAQIDQGVAQLDQMLQLIQQADDLLSQLDPNIDVDSSTWQTVKQLLASVGITVPDVPSISSLRQQLDAKQNELQSQRSDAIKKKTELQQTLDGTIAPAQNTLDQQNAQLTAKEQEAAAGEAELNAKLTELESNAAQLETRSAQLEAQAAQLAGGKQQLEEGEKQLKDGEQQLEDGKQQLEDAQQELDEKRSEAESEFAKQQRRIDDVANARWYMQTRSSIDGFSSLKSDVSSIESIGRAFPVVFLLVAVLMSLTTMTRMVEEDRGLIGTYLGLGYGGVVVSLRYLLFALLACLFGGGVGLLVGFLGIPAFLLIVIKGLYILPDVRLEYDWVYGTAGILLFVVGVGVATALACRSEIRHTPAALMRPKAPKAGARILLERIRPVWNRLSFLGKVTARNIFRFKSRLLMTVGGVAGCTALIICGFAINDTVDTIGVKQYGQIYQYDLMVVSNDDDAAAMRKQVKKDGRTTETLNLRVDSAEMSNAAQESETIQLMAVPNNSLNKLNDMVTLEEAGDEGWFGLPNFFGASGGGTVTLDDSGVIVAQSAANSLGVHTGDTVTVSNGGSSRAKIKVAAVVRNLIGSDVYISERLYDQKFAAHDIDSSASDGESSTLTWNAMLAKLKGPDGEQAEYADRLGEESSVVKAVSCAHLEATFKFDLMAAVVALIVGLAGGLALVVLFTLANTNVSERVREMATLKVLGFYDCEVHNYVNREMMILTGMGVVVGLPLGRWIGGLLTAALNMPSLYFEVEVHWYSYAIAVAVTLAFALLVQLFTNPVLDRIEPVSSLKSVE
>NZ_CP021388.1|WP_014484406.1|2254645_2256169_-|amino-acid-permease
MADTNANGNAQQSGSKLKSVESLDQTNAMERGLSNRHVQFIAIGGTIGTGLFLGSGKSISLTGPSIVFVYILVGVIMFFLMRAIGEMMYRDPSQHTFINFITRYLGNGWGHFAGWTYWAALVLLGMTEITAVSTYFITFFDTFGIDLTHWKWLIELCFLVSLVSVNLIAVKVFGEVEFWFSMIKITLIGAMIVTAVVMIVIGYQYPAARIHGVDHVSPAGHAGLDNLFAGFSFAPNGWMAFLMSFQMVFFAYELLEFVGVTVSETKNPREVLPKAVNEIIVRVLIFYVGALVAIMCIVPWTSFKPNEDGSFASPFIMVFQYAGLNWASALVFFVVITAASSSLNSLLYSAGRHLYQLAEESPSPMLNKIGQVSDRKVPARAILVSAVLILLSPIVNAIPGVSGAFVLFSSASSAVFLFIYILTLVAHRKYRRSDDFIPDGFVMPVWKVLNTVAIAFFVFIYLTLFLADDTRNSAIAGLVWLIGFGGFSLLRERYRSRDLKAALEHKE
>NZ_CP021388.1|WP_019727591.1|2253198_2253720_-|MarR-family-transcriptional-regulator
MGFEQEAVGELYASVWGNRSKMQREFTRGAHGEQFVLRELSFKGTQTPSQLATALQASSGRISAVLSSLEKKGWITRDIDSNDRRIIRVSLTDSGREESHRMIDEMRSAICWIFSQMGERRTREFVDLLSEFTTYMSICHPGQPRPTAEQVRGAFAERDKRVVEHMASKHAEG
>NZ_CP021388.1|WP_052788289.1|2251146_2253015_-|ABC-transporter-ATP-binding-protein
MFRIMKYLSKAEIGQMLIALVSIVGQIWFDLELPDYMSDITTLVETPGSAMADIWTAGGKMLLISLGSVCCAIITGYIAARVASSFGQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDITQIQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTVATAIAVVILLVAVVILMALVMPKFKAMQGLTDNINLVARENLTGLRVVRAYNAEDYQESKFTKANKDLTDTQLFTNRTMAIMMPLMNTVMNGLMLAVYWIGAYLIEAAELTDKLTVFSNMVVFSSYSVQVIMSFLLMSMVFVLWPRADVSAQRVMEVLNTEPIVKNGTKRVADIAKTGQTGTVEFKDVSFTYPDSREAMLQGINFKAEKGQTVAFIGSTGSGKSSLINLVPRFYDVSAGQVLVDGVDVRDYDMVALRDKIGYVPQRSVLFKGTVAGNISYGDKPGENDAVELADTSTPAGRKREALQLAADAANDGKLTDEQMSRVKAAADVAQASEFVNRMDGGFDSPIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDRAVRDALAEEAKDSTKLIVAQRIGTIMNADRIVVLDEGKVVGQGTHKELLENCEVYRQIAESQLSESELTA
>NZ_CP021388.1|WP_042994364.1|2249185_2251015_-|ABC-transporter-ATP-binding-protein
MPRGPMGRGGAVEKPQDFGKVMGKLVRFCRKYVPAIIIALVLGAAGTICQIIGPDKLKDMTNEITKGLPAVVHGKPVLNSIDMGAVARIGWLLVVLYVGYALLSYIQSWMMATVTQRTAQELRESISKKINKLPLSYFDKVSYGDVLSRITNDVDAIGQTLGQSLGSLITSATLFVGALVMMFYDNWIMALCAIGSSIIGLIIMMVIMKASQKYFTRQQVALGDVNGHVEEMYAGHTIVKAYNGEADSIRRFERYNADLYDSGWKSQFLSGLMMPLMNFVGNFGYVVVCVVGAALAMDGQIEFGVIVAFMMYIRLFTQPLSQFAQAFQNLQRCAAASERVFGFLEESEMADESGKQALLGAQGHEVHGDVEFSHVRFEYEAGKPIINDFSASVSSGQKVAIVGPTGAGKTTMVNLLMRFYEIAGGSIAIDGVDTKSVPRWNVHDQFSMVLQDTWIFNGTVRENIAYSKPGVTDERIISACKAVGLHHYIMSLPNGYDTVLDENSSLSAGQKQLLTIARAMVQDAPILILDEATSSVDTRTEELIQKAMDALTVDRTSFVIAHRLSTIRDADMILVMNHGDVIERGTHEELLAAGGFYADLYNSQFALSD
>NZ_CP021388.1|WP_106628942.1|2248235_2249177_+|FAD:protein-FMN-transferase
MTGLTEQLPHTAAFPNALGTGLLLHTASALGGDLHQHIEDLISDYENVLSRFKGDSIVGQMRVATHGGTFDFPDWTLNLFDLYDHLFSATNGAIDPCVGEDLIRLGYDKSYSSANEPNAAEHTGAIHGRATWDHAIEHHGTTLVTHGPVALDFGACGKGYLVDLIAERLGVAQSDLRYVIDAGGDLLVHTSEPITIALEDPSDPANAVGVAEISQGAFCASSPSRRHWTDAAGHQLHHLLNAIDGVPVNSVAATWVAATPPSLATAQADGLATALFTTPAAQLRAHFPFECAILTADRSAAQSPDFPGSFFMR
>NZ_CP021388.1|WP_106628941.1|2246712_2248131_-|sodium:solute-symporter
MDNATAVSATNVSGGSLQSTVKDLPIAKVWAFAVGQFGWALLSGIISNWLVYFYQPDQETVSQGQTVFVPQGLVVFGLVTVVGGITAFARFFDAFVDPAVASLSDRCDSKAGRRMPFLKFAALPLAVVTVLVFWSPINGTSWVNAAFLFVTVIGYYIALTFYCTPYNALIAELGHDSKQQLTISTAISFTWVAGTAIAYVAPVIWGAFVPMMGRITAIRVTFTIMAAVAFACMLVPPLAIREKDYVNSQPTSESTIESLKQTFFDGEFRKFVCSDVVYWVAITTFQTGLPFFVTSLLKLPETTTTIYFVLMTGVSVLFYLPVNILANRVGKKRLLLIAFVIFTCAFAFAGALGSGVLAFMPAMAQGLTLSVVGAIPMAAFGILPQAIVANIADASSKTTGQDRQGMFYAARTFAMKMGQSVAMLLFTGVSTIGMASGAGYRIAAVCAAVLCGLGGIVFAFYNEKKVLHVLGA
>NZ_CP021388.1|WP_106628940.1|2245033_2246083_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MLFGLGNTGSMTSADELNEQRDAEQSVAQVFERNDGNDGIDAGEPAASQTRESAVTIPAGTVVLAATPIGNVGDASARLVALLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHDHNERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDALALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFGPNRPMALCRELTKDYEQIRRGPIGEIRQSVIDDPPRGEMVLVIGGASSEESEAAAPSTLSVEDMAVLAIDRALEDGLRIKDAIAQVVQEHPLADGSLANRKQVYAAVLEIKG
>NZ_CP021388.1|WP_032734693.1|2244566_2244914_+|hypothetical-protein
MRITGRHASRRLDRLHQAQRLPRASDIQSHSPHASAAVNHDAPPSPPIALTPSVACSPDTPIEVLWHIAQHAPELRRWLIANPRADAALLEFISQAGGPGVKRALAVLLESMEEE
>NZ_CP021388.1|WP_015439323.1|2261374_2262847_+|amino-acid-permease
MSTTDAPKKPRETDDVPVPATLRKSLKNRHIQLIALGGAIGTGLFYGSSESIALAGPSILLAYLIGGFAIFMIVRALSEMSVEDPKAGAFSYYATRYWSKRAGFISGWNYWFNYILVSMVELAVVGSFVNYWFPAIPTWVSAAVFLVLITAANLLGVSKFGEFEFWFAIIKIVAVIAMIIGGLAVIIFALPTASGIKASFANWFTVGGGFFPNGLMGHTDNGWTGLLMALVVVMFSFGGTELIGITAGETEDPKITIPRATNDIIWRILVFYIGALGVIMAVVPWNTIDGKSSPFVQIFDSVGIHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLNSKGVPVAGVLTSAVITAIAVVVVFVWPEFAFNYLMSIATIAGIINWTMIMFTEMKFRKVVEAGGAPEDSDLAGKSGQEALDAIHFKLPFAKVTPWVVLVFLALVVVLMCFSASYRIAVIAGVIWLAILFVAYQITQAKK
>NZ_CP021388.1|WP_015439324.1|2262898_2263504_-|DUF624-domain-containing-protein
MNWLAPDSKFMRAWSNLIDGIWVNILMLVTSIPIITIGAALTAGHDACRRSIEGEGKGVTANYFRSFKANFVKATLLWLPFLVVLIALAWSWIVLQFTPLLIIKFALTIIWLIGFEWVFALQARFENTVAGTLKNAFIFGISHIAMTAALVVVDAVFVALLVGSWFYMPGGLFLLVILGYGTMLMLHIPVTERVFKPYLQQ
>NZ_CP021388.1|WP_003829602.1|2263654_2264497_-|carbohydrate-ABC-transporter-permease
MNENKPVKHGALWTVLFAVVSLFWIFPIVLVLINSFKQKAYISKNAFSLPAGKAFVGFENYVRGVETTQFFASFGWTLLITVGSVILILVCTSMCAWWIVRVNNWAAKLLYTLFLFNMIVPFQMVMFTLSKIADMLKLNTPWGLCIVYLGFGAGLAVFIFTGVIKGIPAELEESAMIDGASVPRIFFQIVVPIMKPSIVSVAILEAMWIWNDYLLPYLTLDLGKYKTISVAVQYLKGGYGSVDMGAMMACLVLAIIPIIVFYLVCQKYIVSGVMAGAVKG
>NZ_CP021388.1|WP_014484409.1|2264496_2265351_-|sugar-ABC-transporter-permease
MISMAGKAIRRWWALFALPTFAAFIIGFLVPFIMGVYLSFCEFTTVTDGEWIGLKNYTKALKDKEFLHALGFSTAFTIVTTIVINVIAFAIAYMLTKAIKGSTLFRSVFFMPNLIGGIILGYIWLLLLNGVLAHWGRALTYKASYGFWGLVILVCWQQIGYMMIIYIAGLQALPTDVLEAAAVDGANGRQTMFRIIIPLMMPSITVCSFLTVTNGFKLYDQNLALTNGAPSNMSEGLALNITRTFYGRMGWEGVGQAKAVLFFILVAVIALIQNKLTTSKEVAA
>NZ_CP021388.1|WP_015439325.1|2265721_2266738_+|LacI-family-transcriptional-regulator
MTTSIQDVAQKAGVSISTVSRSFTRPDLVSTKTRERVLAIADELNFSLSRSAAALKSGRSLRIAVLMSGHIRLWFTASVIEGLNEVLHAAGYDISVFQISSIEERREFFEMLPVRRNADAVIVVSFDIDNNEITQLASADVPIIGINSVDPEVRGFTAAVNINDVQGSTLAARHLINLGHRDIAYISTDRDVSLNFSVQNRFGAFTECCRNEGIEPQVIVCKVDDAGRYQISDVVTQLMSLPKLPTAIACQEDGIALPLMFQLERNGLSVPGDVSLIGYDDSFYTDDIGLTTIRQNPVGMARKAAHMTLDLIEEKPVDEPYVVAPAHLVVRSSTAKIR
>NZ_CP021388.1|WP_106621147.1|2266945_2268274_-|ABC-transporter-substrate-binding-protein
MMNRTVKSAVAVAAIAAMSLGTLAACGSSTSGDDSKGKVYYLNFKPEAADQWAALAKEYTKEKGVEVKVQTAASGTYEQTLKSEIAKTEAPTLFQVNGPVGYQNWKKYTADMSNTDVYKELTNQDVALKDGDKVVGVPYVMETYGLIYNKDILNKYFALDGAKATSMDEIDNFDTLKAVADDMQSRKDELGIKGAFTSAGFDSSSDWRFKTHLANLPLYYEFKDDNVTEQPAKIKGTYLPNYKKIFDLYITDSTTEPTQLSAKTGDDANSEFALGEAAFYQNGTWAWTDLQKAGMKAESVGMMPIYIGVKGEEKQGLATGSENYWCINDKASDADKKATEDFLSWVITSDAGKKALSQDMGFTTPFKTFDDVKSDNPLTEAAVEDQKSGKTQVSWNFTMMPSEEWKNKIGQALLEYAQGTGNWDAVKTAFVDGWASEYEASH
>NZ_CP021388.1|WP_100199007.1|2268686_2269385_-|histidine-phosphatase-family-protein
MDGTVAVDASCGKAGFLVLLRHGQTFWSESGQHTGRTNIPLTEVGRQQAMDAGARLREAFPEGFDPECVFSSPLKRACQTAELAGFAQHGILDGIAEWDYGRAEGRTRQQVSEASGFSWDVWRDGPRSLTPTLEGDWVDTLPDGEQVNVHSGAGETLDEVAARARTAIEEVTPLLQSGRNVLLVAHAHILRILTSQWLNVDPQFARLLRLDTAHYSVLSVYKGDNVIERWNA
>NZ_CP021388.1|WP_014484412.1|2269471_2269849_+|DUF4235-domain-containing-protein
MSDETNTGIASDADRVVEGLHRIDQKVDDLRNQRLNDPDSLGDKLVKSAVPALAGLVAGKLFQIAWDKGAARRNVIKGLAADAPQGLAMSLAFAAISAAFGAIVSQLSNQGSQAFVERRHRKASR
>NZ_CP021388.1|WP_106628944.1|2270878_2273626_+|YhgE/Pip-domain-containing-protein
MRTVWQVFLRDCKRILRNPVAAVVTLGVAVLPSLYAWFNILANWDPYSATGNLQVAVANEDRGTTNDLVGHLNAGKQVVIKLKHNDQLGWRFVSNEEQAVQGVQTGDYYAAIVLPKDFSASLVDSLTGTSKQPKIKYYVNEKKNAIAPKITDTGATTIDEQINSTFVTTVSNTVAAAISQAGDDLDQATNSTQNNVVADLGSVLSTIATVQDALTDLRTTLDRSDTALADARSTTASLQRSITAAQQASQQSGALLAETQDGSQVFAASLVSALDTSSAQLSGLTVNVNNAAGTINQSFNTAQNSVDTITNALNSPLDKTATSLDTLKDALNKAGISADTTDPTGKRIWDHINAVDDAISTQQAKINTFHEDTTRFIDSGKSATTNLSGAMSGTATGGIAALNTARSSLTGTVMPSLTSSLNSFAALNGTLGGTLTSLSGTLDQTNGLFDQLSSTITQTRTTIGSAQDSLNQIIDDVSTVRTDVATLDSSAVYQKIRDTMHLDDKGFGEFMGSPVTLTTKVVYAIDNYGSAVTPFYTNLALWVGGFVLIAIYKLEVDRESIRRINAKQAYLGRWMLLVTIGFLQAIIATVGDLVLGIQCEHPLLFILAGIFCSFIYINIIYALAVAFRHIGKAIAVILVIVQIPGASGLYPIEMMPDFFRKLHPWLPFTYGINAMRGPIAGTYSNHYWLDMLHLFWYLPAALFVGLVVRRYAMNLNALFDRRLGDTDLMITEHNSMVNEQVSLASVFRTVSDSKELKAIITRRAHRFFARYPMMIVAGLALLTILPFVFLILLFVTQEKIAMLTSWILSIILIDAYLIVVEYTRESYAMQLGVSAMNADEFRDVMLNGYVWRRFRSHGRHEAASAESAVDTDPDIGEVTEQLTPFERTGSTDSSDSSKSSESTITDTNPAQGGAR
>NZ_CP021388.1|WP_106628945.1|2273622_2275962_+|YhgE/Pip-domain-containing-protein
MKLIWKIFARDVRQSTRNVIAVIVAMGLVIVPALYAWYNIAASWDPYGNTKALKVAVANVDKGYKSDLMPITINVGETVTNTLRANHDLDWQFVDKDEAIDGVNSGAYYAALIIPKSFSADMMTVFSPTIKHAKIEYYLNEKINPIAPHITDQGASTVATTIDQTFVKTLASVALDLVSNVSNYAQSPQMAQYVNNATSHISTMSSRLTVAASQMDSYANLLGAANGIIDSTDKLLGSTGSAANTAKKALEQTHDGVNSLDSALSGAASGVETALQQAGASYDTVSKQLDTAFASIGSQSDQISGTLTDMQTKVNDQSASFGAYASALRELAGKSSSLPAGGDTIAKQLNAAADQATQTQQDLKNVADDLGRAAQSLVDGTADTDQTLKDIKAQIAAAKQSVTQAANDYQSTLKPQLNNLTASMGDVADQASSVIDGLSSTVNSVSNLSGGISASLRDIQTTLTDAAGNLNHSASKLDDLSAQLSGIANGSSTDLDSITTADPNAIASLLSAPVAVDRIPLYPVANYGSAMAPFYTILSIWVGAIILVAMMKVSVSDHEKAKILGFGNDLPLGSEVGLREAMIAGRVAGPAAALDVLTKPRADSPGNARQFGLHLYQEYFGRYMLFGFLALLQGTLVCLGDMFYLGVQCEHPVQFMMVGWLSALVFSNIVYTLTLSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPSFFQAASKWLLFPYAVDAMHSAMAGSYGMEYWVSMGKLALFLVPSLLLGLLLRRPVIRFNDWIIRNLESTKVM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP021388_4	4.1\|2093792\|36\|NZ_CP021388\|CRISPRCasFinder	2093792-2093827	36	NZ_CP021388.1	2095129-2095164	2	0.944

1. spacer 4.1|2093792|36|NZ_CP021388|CRISPRCasFinder matches to position: 2095129-2095164, mismatch: 2, identity: 0.944

tcaaagccagtgacagaaatttaggaaatcaacccc	CRISPR spacer
tcaaagccaatgacagatatttaggaaatcaacccc	Protospacer
*********.******* ******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NZ_KP691638	Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence	724-757	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NZ_KP691635	Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence	724-757	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NZ_KP691633	Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence	724-757	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_002635	Bifidobacterium longum KJ plasmid pKJ36, complete sequence	725-758	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_004443	Bifidobacterium longum VMKB44 plasmid pB44, complete sequence	724-757	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NZ_CP010454	Bifidobacterium longum strain BG7 plasmid pRY68, complete sequence	81-114	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_006843	Bifidobacterium longum plasmid pTB6, complete sequence	729-762	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_015066	Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence	2548-2581	0	1.0
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_004943	Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence	813-846	2	0.941
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	794-827	2	0.941
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8294-8327	2	0.941
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4859-4892	2	0.941
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	143-176	2	0.941
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	2933-2966	2	0.941
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	NC_004302	Bacteriophage r1t integrase, repressor protein (rro), dUTPase, holin and lysin genes, complete cds	23401-23434	6	0.824
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	MK448972	Streptococcus phage Javan520, complete genome	21995-22028	6	0.824
NZ_CP021388_3	3.4\|1701487\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1701487-1701521	35	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	1463-1497	7	0.8
NZ_CP021388_3	3.30\|1703254\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703254-1703285	32	MN693991	Marine virus AFVG_250M861, complete genome	20569-20600	7	0.781
NZ_CP021388_3	3.30\|1703254\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703254-1703285	32	MN692996	Marine virus AFVG_117M70, complete genome	20562-20593	7	0.781
NZ_CP021388_3	3.30\|1703254\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703254-1703285	32	MN694291	Marine virus AFVG_250M864, complete genome	17742-17773	7	0.781
NZ_CP021388_3	3.30\|1703254\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703254-1703285	32	MN694083	Marine virus AFVG_250M863, complete genome	17752-17783	7	0.781
NZ_CP021388_3	3.30\|1703254\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703254-1703285	32	MN694793	Marine virus AFVG_250M862, complete genome	20570-20601	7	0.781
NZ_CP021388_3	3.41\|1703999\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703999-1704032	34	NZ_CP029834	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence	220383-220416	7	0.794
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	MK448723	Streptococcus phage Javan271, complete genome	26583-26616	7	0.794
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	KX456210	Lactococcus phage 62501, complete genome	23589-23622	7	0.794
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	KX456208	Lactococcus phage 50901, complete genome	23747-23780	7	0.794
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	KX456206	Lactococcus phage 28201, complete genome	23899-23932	7	0.794
NZ_CP021388_3	3.50\|1704597\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704597-1704630	34	MN534320	Lactococcus phage proPhi7, complete genome	25783-25816	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	221608-221641	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5786923-5786956	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021356	Rhodococcus sp. S2-17 plasmid pRB29, complete sequence	9668-9701	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021356	Rhodococcus sp. S2-17 plasmid pRB29, complete sequence	85744-85777	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP016621	Microvirga ossetica strain V5/3m plasmid unnamed5, complete sequence	91707-91740	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	304933-304966	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_019790	Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE02, complete sequence	15126-15159	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	284788-284821	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1404696-1404729	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	283987-284020	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	180573-180606	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	129327-129360	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	161301-161334	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	287512-287545	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	410436-410469	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	214978-215011	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1515600-1515633	7	0.794
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NZ_CP039693	Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence	102055-102088	7	0.794
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	MT657333	Microbacterium phage Casend, complete genome	30823-30856	8	0.765
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	124096-124129	8	0.765
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	308363-308396	8	0.765
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	257517-257550	8	0.765
NZ_CP021388_3	3.63\|1705473\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705473-1705507	35	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	134118-134152	8	0.771
NZ_CP021388_3	3.63\|1705473\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705473-1705507	35	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	568007-568041	8	0.771
NZ_CP021388_3	3.63\|1705473\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705473-1705507	35	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	624680-624714	8	0.771
NZ_CP021388_3	3.32\|1703386\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703386-1703420	35	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1717227-1717261	9	0.743
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	122704-122737	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP021356	Rhodococcus sp. S2-17 plasmid pRB29, complete sequence	21150-21183	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	207147-207180	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	70457-70490	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	359875-359908	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	63030-63063	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	59068-59101	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	359875-359908	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	103267-103300	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	214198-214231	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	225588-225621	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1095438-1095471	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	711392-711425	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	774740-774773	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	786134-786167	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	486400-486433	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	371870-371903	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	383264-383297	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	9741-9774	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	5887-5920	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	204014-204047	9	0.735
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	MH617500	Microviridae sp. isolate ctgf627, complete genome	818-851	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	647015-647048	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	214937-214970	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1072891-1072924	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	297336-297369	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	298080-298113	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	290134-290167	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	290560-290593	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	171069-171102	9	0.735
NZ_CP021388_3	3.55\|1704933\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704933-1704966	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1059481-1059514	9	0.735
NZ_CP021388_3	3.60\|1705273\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705273-1705304	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	583943-583974	9	0.719
NZ_CP021388_3	3.61\|1705338\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1705338-1705371	34	NC_027348	Delftia phage RG-2014, complete genome	32818-32851	9	0.735
NZ_CP021388_2	2.2\|1698598\|33\|NZ_CP021388\|CRISPRCasFinder	1698598-1698630	33	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1684394-1684426	10	0.697
NZ_CP021388_2	2.2\|1698598\|33\|NZ_CP021388\|CRISPRCasFinder	1698598-1698630	33	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1950644-1950676	10	0.697
NZ_CP021388_3	3.14\|1702167\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1702167-1702198	32	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	85467-85498	10	0.688
NZ_CP021388_3	3.14\|1702167\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1702167-1702198	32	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	540381-540412	10	0.688
NZ_CP021388_3	3.14\|1702167\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1702167-1702198	32	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	538215-538246	10	0.688
NZ_CP021388_3	3.14\|1702167\|32\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1702167-1702198	32	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	219836-219867	10	0.688
NZ_CP021388_3	3.35\|1703590\|35\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703590-1703624	35	NC_048825	Gordonia phage Crocheter, complete genome	5249-5283	10	0.714
NZ_CP021388_3	3.41\|1703999\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1703999-1704032	34	NZ_CP038639	Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence	336174-336207	10	0.706
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	74423-74456	10	0.706
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	93720-93753	10	0.706
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	332656-332689	10	0.706
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	311885-311918	10	0.706
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	MT133562	Pseudomonas phage willy, complete genome	50856-50889	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	KP340288	Pseudomonas phage phiKTN6, complete genome	51069-51102	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	MT119368	Pseudomonas phage shane, complete genome	50969-51002	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	MT119363	Pseudomonas phage debbie, complete genome	50966-50999	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	LN610588	Pseudomonas phage vB_PaeM_PAO1_Ab29, complete genome	59219-59252	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	KX171208	Pseudomonas phage vB_Pae436M-8, complete genome	52250-52283	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	KR869157	Pseudomonas phage vB_PaeM_CEB_DP1, complete genome	51616-51649	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	MT133561	Pseudomonas phage goonie, complete genome	49657-49690	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	NC_050148	Pseudomonas virus Pa193, complete genome	59089-59122	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	NC_041902	Pseudomonas phage PA5, complete genome	33052-33085	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	MT118297	Pseudomonas phage Epa20, complete genome	16722-16755	11	0.676
NZ_CP021388_3	3.53\|1704799\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704799-1704832	34	NC_048626	Pseudomonas phage PA01 DNA, nearly complete genome	43369-43402	11	0.676
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	KY092482	Streptomyces phage Mojorita, complete genome	17186-17219	11	0.676
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	KY092480	Streptomyces phage Picard, complete genome	17177-17210	11	0.676
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP044424	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence	94242-94275	11	0.676
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NC_019339	Arthrobacter sp. J3-49 plasmid pJ349-116, complete sequence	67683-67716	11	0.676
NZ_CP021388_3	3.54\|1704866\|34\|NZ_CP021388\|PILER-CR,CRISPRCasFinder,CRT	1704866-1704899	34	NZ_CP044424	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence	95371-95404	12	0.647

1. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP691638 (Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

2. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP691635 (Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

3. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP691633 (Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

4. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_002635 (Bifidobacterium longum KJ plasmid pKJ36, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

5. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_004443 (Bifidobacterium longum VMKB44 plasmid pB44, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

6. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010454 (Bifidobacterium longum strain BG7 plasmid pRY68, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

7. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_006843 (Bifidobacterium longum plasmid pTB6, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

8. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_015066 (Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence) position: , mismatch: 0, identity: 1.0

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcgct	Protospacer
**********************************

9. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_004943 (Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtcgcctt	Protospacer
******************************* .*

10. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtggcact	Protospacer
**************************** **.**

11. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtggcact	Protospacer
**************************** **.**

12. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtggcact	Protospacer
**************************** **.**

13. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtggcact	Protospacer
**************************** **.**

14. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 2, identity: 0.941

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagttcagcaaccagttcaacaacgtggcact	Protospacer
**************************** **.**

15. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_004302 (Bacteriophage r1t integrase, repressor protein (rro), dUTPase, holin and lysin genes, complete cds) position: , mismatch: 6, identity: 0.824

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtggaactctaaacg	Protospacer
**************************.*. *

16. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 6, identity: 0.824

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtggaactctaaaca	Protospacer
**************************.*. *

17. spacer 3.4|1701487|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.8

atggcgcagggcgcacggcccgaga-cacgggaatc	CRISPR spacer
atggcgcaggtcgcatggcccgagatcatgctgat-	Protospacer
********** ****.********* **.*  .**

18. spacer 3.30|1703254|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN693991 (Marine virus AFVG_250M861, complete genome) position: , mismatch: 7, identity: 0.781

aagttcctccacgtgcatctctacccgtggca	CRISPR spacer
cagttcctccacctgcatctccacctccagca	Protospacer
 *********** ********.***. ..***

19. spacer 3.30|1703254|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN692996 (Marine virus AFVG_117M70, complete genome) position: , mismatch: 7, identity: 0.781

aagttcctccacgtgcatctctacccgtggca	CRISPR spacer
cagttcctccacctgcatctccacctccagca	Protospacer
 *********** ********.***. ..***

20. spacer 3.30|1703254|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN694291 (Marine virus AFVG_250M864, complete genome) position: , mismatch: 7, identity: 0.781

aagttcctccacgtgcatctctacccgtggca	CRISPR spacer
cagttcctccacctgcatctccacctccagca	Protospacer
 *********** ********.***. ..***

21. spacer 3.30|1703254|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN694083 (Marine virus AFVG_250M863, complete genome) position: , mismatch: 7, identity: 0.781

aagttcctccacgtgcatctctacccgtggca	CRISPR spacer
cagttcctccacctgcatctccacctccagca	Protospacer
 *********** ********.***. ..***

22. spacer 3.30|1703254|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN694793 (Marine virus AFVG_250M862, complete genome) position: , mismatch: 7, identity: 0.781

aagttcctccacgtgcatctctacccgtggca	CRISPR spacer
cagttcctccacctgcatctccacctccagca	Protospacer
 *********** ********.***. ..***

23. spacer 3.41|1703999|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029834 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.794

aggttgccacgccctgctgttccatc-tcgtgaat	CRISPR spacer
aggtggccgcgccctgctgttccaccgccgtggc-	Protospacer
**** ***.***************.* .****.

24. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 7, identity: 0.794

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtgaaactctaaaca	Protospacer
**********************.***.*. *

25. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KX456210 (Lactococcus phage 62501, complete genome) position: , mismatch: 7, identity: 0.794

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtgaaactctaaacg	Protospacer
**********************.***.*. *

26. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KX456208 (Lactococcus phage 50901, complete genome) position: , mismatch: 7, identity: 0.794

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtgaaactctaaacg	Protospacer
**********************.***.*. *

27. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KX456206 (Lactococcus phage 28201, complete genome) position: , mismatch: 7, identity: 0.794

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtgaaactctaaacg	Protospacer
**********************.***.*. *

28. spacer 3.50|1704597|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MN534320 (Lactococcus phage proPhi7, complete genome) position: , mismatch: 7, identity: 0.794

tataaacctcgtgaaaacggtggaacccctacgt	CRISPR spacer
tataaacctcgtgaaaacggtgaaactctaaaca	Protospacer
**********************.***.*. *

29. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tgatcagcacggcgacggcggcggtgaacgccgc	Protospacer
  **** *****************.****. .**

30. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ccaccaccacggcgacggcagcggcgatccaggg	Protospacer
 **.***************.******* * * *

31. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021356 (Rhodococcus sp. S2-17 plasmid pRB29, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tgatcagcacggcgacggcggcggtgaacgcggc	Protospacer
  **** *****************.****.  **

32. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021356 (Rhodococcus sp. S2-17 plasmid pRB29, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tgatcagcacggcgacggcggcggtgaacgcggc	Protospacer
  **** *****************.****.  **

33. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016621 (Microvirga ossetica strain V5/3m plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ggaacaggacggcgacggcgaccgcgaacaatgc	Protospacer
. * **  ************.* ***********

34. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agctcaaggcggcaacggcggcgtcgaacaatgc	Protospacer
*  ***  .****.********* **********

35. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_019790 (Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE02, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ccatcaccacggcgatgtcggcggcgtgcagggc	Protospacer
 **************.* ******** .**. **

36. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agctcaaggcggcaacggcggcgtcgaacaatgc	Protospacer
*  ***  .****.********* **********

37. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

38. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

39. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

40. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

41. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

42. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

43. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

44. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

45. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.794

acatcaccacggcgacggcggcggcgaacaatgc----	CRISPR spacer
acatcaccaaggcgacgccggcgg----aaatgcggga	Protospacer
********* ******* ******     *****

46. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 7, identity: 0.794

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
tgaagtttagcgaccagttcaacaacaagccgcc	Protospacer
*******.***.**************.   ***.

47. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT657333 (Microbacterium phage Casend, complete genome) position: , mismatch: 8, identity: 0.765

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cgatcaccacggcgacggcggcggcgcgacaggt	Protospacer
  ************************ .  * *.

48. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.765

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tcatcagcagggcgacggcggcggcgcgccatcg	Protospacer
 ***** ** **************** .* **

49. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 8, identity: 0.765

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tcgtcaccgcggcgagggcggcggcgagcccggc	Protospacer
 *.*****.****** ***********.*   **

50. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

acatcaccacggcgacggcggcggcgaacaatgc-	CRISPR spacer
gcttcgccacggcgatggcggcggcgagc-gcgcg	Protospacer
.* **.*********.***********.* ..**

51. spacer 3.63|1705473|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.771

ccgagcgtggtgtgaccggcgttgcgcatggcgat	CRISPR spacer
caggtcccggtctgaccggccttgcgcatggcgag	Protospacer
* *. * .*** ******** *************

52. spacer 3.63|1705473|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.771

ccgagcgtggtgtgaccggcgttgcgcatggcgat	CRISPR spacer
caggtcccggtctgaccggccttgcgcatggcgag	Protospacer
* *. * .*** ******** *************

53. spacer 3.63|1705473|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.771

ccgagcgtggtgtgaccggcgttgcgcatggcgat	CRISPR spacer
caggtcccggtctgaccggccttgcgcatggcgag	Protospacer
* *. * .*** ******** *************

54. spacer 3.32|1703386|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.743

gtgacctcgccgccaaggtagcgcatgttgtcggg	CRISPR spacer
ccgacatcgccgccaaggaagcgcatgcgaaccgg	Protospacer
 .*** ************ ********. . * **

55. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
cggcggtgaggatggcatgcaggccattccgcga	Protospacer
* *.************ **** *******

56. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021356 (Rhodococcus sp. S2-17 plasmid pRB29, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ggttgaccgcggcgatggcggcggcgaacgccgc	Protospacer
.  * ***.******.*************. .**

57. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

58. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agagcaccacggcgatggcggcgccgaactgcca	Protospacer
* * ***********.******* ***** ..

59. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

60. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agagcaccacggcgatggcggcgccgaactgcca	Protospacer
* * ***********.******* ***** ..

61. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

62. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

63. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

64. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

65. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agagcaccacggcgatggcggcgccgaactgcca	Protospacer
* * ***********.******* ***** ..

66. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cgagcgccacggccatggcggcggcgaacaggga	Protospacer
  * *.******* *.**************. *

67. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccaggat	Protospacer
*****.*********** *******.. **. ..

68. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agagcaccacggcgatggcggcgccgaactgcca	Protospacer
* * ***********.******* ***** ..

69. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

70. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ggttgaccgcggcgatggcggcggcgaacgccgc	Protospacer
.  * ***.******.*************. .**

71. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agagcaccacggcgatggcggcgccgaactgcca	Protospacer
* * ***********.******* ***** ..

72. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
acatcgccacggcgacgccggcggcagccagaat	Protospacer
*****.*********** *******.. **. ..

73. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc-	CRISPR spacer
cgatgaccacggcgacggcggccgcg-gtgacgcc	Protospacer
  ** ***************** *** ...*.**

74. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
agatcaccaccgcgacggcggcgacggagccgac	Protospacer
* ******** ************.**.*    .*

75. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
tgatctcctcggcgacggcggcggcgttcaccgt	Protospacer
  *** ** *****************  ** .*.

76. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MH617500 (Microviridae sp. isolate ctgf627, complete genome) position: , mismatch: 9, identity: 0.735

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
atctgtctacggcgacggcggcgacgatcaatca	Protospacer
*. *  *.***************.*** ****

77. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
ccacgctgaccggcgtgtccggcaccgaactcgc	Protospacer
******** .**************  .*.*  *.

78. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

79. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

80. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

81. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

82. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

83. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

84. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

85. spacer 3.55|1704933|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.735

ccacgctgttcggcgtgtccggcaagaagcaggt	CRISPR spacer
acacgctgttcggcgaggccggcaacgacacgct	Protospacer
 ************** * ******* .*   * *

86. spacer 3.60|1705273|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 9, identity: 0.719

tcgctcatgcccaagtccatgatggccttgtt	CRISPR spacer
cagctcatgggcaagtccatgatggtcatcgg	Protospacer
. *******  **************.* *

87. spacer 3.61|1705338|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_027348 (Delftia phage RG-2014, complete genome) position: , mismatch: 9, identity: 0.735

tgaagttcagcaaccagttcaacaacgtcgcgct	CRISPR spacer
cgccgttccgcaacaagttcaacaacgtccgtgt	Protospacer
.*  **** ***** **************    *

88. spacer 2.2|1698598|33|NZ_CP021388|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 10, identity: 0.697

tccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
tccggtgcctgctcacaaggacagacgaagctc	Protospacer
****.******** **********. .*.  ..

89. spacer 2.2|1698598|33|NZ_CP021388|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 10, identity: 0.697

tccgatgcctgctgacaaggacaggaaagcact	CRISPR spacer
tccggtgcctgctcacaaggacagacgaagctc	Protospacer
****.******** **********. .*.  ..

90. spacer 3.14|1702167|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtaatcggtgtccgcccgcaacattttgac	CRISPR spacer
tgatgctcggtgtccggccggaacattttacg	Protospacer
. .*. ********** *** ********.

91. spacer 3.14|1702167|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtaatcggtgtccgcccgcaacattttgac	CRISPR spacer
tgatgctcggtgtccggccggaacattttacg	Protospacer
. .*. ********** *** ********.

92. spacer 3.14|1702167|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtaatcggtgtccgcccgcaacattttgac	CRISPR spacer
tgatgctcggtgtccggccggaacattttacg	Protospacer
. .*. ********** *** ********.

93. spacer 3.14|1702167|32|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtaatcggtgtccgcccgcaacattttgac	CRISPR spacer
tgatgctcggtgtccggccggaacattttacg	Protospacer
. .*. ********** *** ********.

94. spacer 3.35|1703590|35|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_048825 (Gordonia phage Crocheter, complete genome) position: , mismatch: 10, identity: 0.714

tgacttgcgcaacgcataagactcatagtttaccg	CRISPR spacer
tgatttgcacaacgcataagactcataacgccatt	Protospacer
***.****.******************.. .  .

95. spacer 3.41|1703999|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038639 (Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

aggttgccacgccctgctgttccatctcgtgaat	CRISPR spacer
gacgtgccacgccctgctgctccaactccaggct	Protospacer
..  ***************.**** ***  *. *

96. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 10, identity: 0.706

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
gcatcgccacggcgacgccggcggcagccaggat	Protospacer
.****.*********** *******.. **. ..

97. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cctgcaccgcggcggcggcggcggcgaactgctg	Protospacer
 *  ****.*****.************** ..

98. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 10, identity: 0.706

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cgagcagcacggcgccggcggcggcgaaggcgac	Protospacer
  * ** ******* ************* .  .*

99. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 10, identity: 0.706

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cctccaccgcgccgacggcggcggcgaagctctc	Protospacer
 * .****.** ****************   . *

100. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT133562 (Pseudomonas phage willy, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

101. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KP340288 (Pseudomonas phage phiKTN6, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

102. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT119368 (Pseudomonas phage shane, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

103. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT119363 (Pseudomonas phage debbie, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

104. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to LN610588 (Pseudomonas phage vB_PaeM_PAO1_Ab29, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

105. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KX171208 (Pseudomonas phage vB_Pae436M-8, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

106. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KR869157 (Pseudomonas phage vB_PaeM_CEB_DP1, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

107. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT133561 (Pseudomonas phage goonie, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

108. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_050148 (Pseudomonas virus Pa193, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

109. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_041902 (Pseudomonas phage PA5, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

110. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to MT118297 (Pseudomonas phage Epa20, complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

111. spacer 3.53|1704799|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_048626 (Pseudomonas phage PA01 DNA, nearly complete genome) position: , mismatch: 11, identity: 0.676

ccgtggtgaggatggcttgcacgccattcatatc	CRISPR spacer
gttcgagcaggatggcttgctcgccgttcataat	Protospacer
 . .*.  ************ ****.****** .

112. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KY092482 (Streptomyces phage Mojorita, complete genome) position: , mismatch: 11, identity: 0.676

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cgggcacgacggcgacgacggcggcgaacgtctg	Protospacer
  . *** *********.***********. .

113. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to KY092480 (Streptomyces phage Picard, complete genome) position: , mismatch: 11, identity: 0.676

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
cgggcacgacggcgacgacggcggcgaacgtctg	Protospacer
  . *** *********.***********. .

114. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044424 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence) position: , mismatch: 11, identity: 0.676

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ggcttgccagggcgacggcgacggcgaacaccag	Protospacer
.  *..*** **********.********* ..

115. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NC_019339 (Arthrobacter sp. J3-49 plasmid pJ349-116, complete sequence) position: , mismatch: 11, identity: 0.676

acatcaccacggcgacggcggcggcgaacaatgc-------	CRISPR spacer
cgatcagcacggcgagggcggcggc-------gctttcgcg	Protospacer
  **** ******** *********       **

116. spacer 3.54|1704866|34|NZ_CP021388|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044424 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence) position: , mismatch: 12, identity: 0.647

acatcaccacggcgacggcggcggcgaacaatgc	CRISPR spacer
ggcctgccagggcgacggcgccggcgaacaccag	Protospacer
.  ...*** ********** ********* ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

931728 : 1001994

Planktothrix_phage(15.79%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003831864.1\|931728_932316_+\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	2.8e-24	36.5
WP_003831865.1\|932308_933613_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	7.0e-36	34.0
WP_032739352.1\|933633_934275_+	hypothetical protein	NA	NA	NA	NA
WP_003831866.1\|934435_935608_+	hypothetical protein	NA	NA	NA	NA
WP_003831867.1\|935635_936970_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_106628727.1\|937198_938428_-	acetate kinase	NA	NA	NA	NA
WP_106628728.1\|938559_940230_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_052787071.1\|940650_941673_-	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	2.5e-41	35.6
WP_042994126.1\|941813_943745_-	acetyltransferase	A0A166XZF2	Gordonia_phage	3.7e-17	26.3
WP_003828999.1\|943888_945451_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-13	27.5
WP_014483873.1\|945898_948376_+	phosphoketolase	NA	NA	NA	NA
WP_021648939.1\|948559_949942_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	2.2e-27	33.6
WP_003833436.1\|949945_950332_+	ribosome silencing factor	NA	NA	NA	NA
WP_003829007.1\|950328_951030_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_103619829.1\|951439_952249_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_065456799.1\|952495_953476_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_025332200.1\|953644_954847_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-29	37.7
WP_014483869.1\|954843_955530_+	ABC transporter permease	NA	NA	NA	NA
WP_003829014.1\|955608_956760_+	amidohydrolase	NA	NA	NA	NA
WP_003829015.1\|956853_958551_+	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	4.3e-86	37.1
WP_003829017.1\|958569_958800_+	hypothetical protein	NA	NA	NA	NA
WP_003833430.1\|959074_961450_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.8e-152	39.2
WP_003833429.1\|961562_962444_+	pyruvate formate lyase-activating protein	NA	NA	NA	NA
WP_014483867.1\|962625_963258_+	DUF3000 family protein	NA	NA	NA	NA
WP_025262913.1\|963254_964556_+	ribonuclease D	K7XYU9	uncultured_Mediterranean_phage	8.6e-10	25.0
WP_003829027.1\|964610_965984_+	trigger factor	NA	NA	NA	NA
WP_021648932.1\|966167_967568_+	chloride channel protein	NA	NA	NA	NA
WP_003829031.1\|967612_967990_+	hypothetical protein	NA	NA	NA	NA
WP_003833421.1\|968141_968765_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.7e-43	49.7
WP_014483863.1\|968770_969454_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.9e-38	42.9
WP_106628729.1\|969627_970989_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.7e-114	49.4
WP_021648931.1\|971381_972587_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_042994123.1\|972667_974056_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.3e-43	34.6
WP_003829040.1\|974094_974997_+	TIGR00730 family Rossman fold protein	A0A1D8KU27	Synechococcus_phage	4.4e-21	39.1
WP_003829041.1\|975037_975703_-	O-methyltransferase	NA	NA	NA	NA
WP_015438693.1\|975765_976716_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_025301173.1\|976788_978651_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_065452654.1\|978752_980372_-	DNA-processing protein DprA	NA	NA	NA	NA
WP_106628730.1\|980368_981904_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_106628731.1\|981918_982335_-	YraN family protein	NA	NA	NA	NA
WP_003829051.1\|983308_984181_-	pyridoxamine kinase	NA	NA	NA	NA
WP_014483857.1\|984733_986050_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	1.2e-14	25.8
WP_106628732.1\|986524_987451_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-32	40.2
WP_106628733.1\|987482_990221_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_032734837.1\|990509_991316_-	response regulator transcription factor	NA	NA	NA	NA
WP_016463161.1\|991337_993806_-	hypothetical protein	NA	NA	NA	NA
WP_014483852.1\|993887_995366_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003829067.1\|995512_996334_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_003833469.1\|996475_997324_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003833468.1\|997393_998182_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-30	31.3
WP_003829075.1\|998174_998882_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_077149459.1\|998859_999522_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_025221488.1\|999963_1001058_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_079287481.1\|1001139_1001994_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.5e-44	38.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021388

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection