CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP025458	Klebsiella pneumoniae strain KP69 plasmid p69-2, complete sequence	0 crisprs	RT	1
NZ_CP025459	Klebsiella pneumoniae strain KP69 plasmid p69-3, complete sequence	0 crisprs	NA	0
NZ_CP025456	Klebsiella pneumoniae strain KP69 chromosome, complete genome	2 crisprs	cas3,DEDDh,WYL,DinG,RT,csa3	16
NZ_CP025460	Klebsiella pneumoniae strain KP69 plasmid p69-4, complete sequence	0 crisprs	NA	0
NZ_CP025457	Klebsiella pneumoniae strain KP69 plasmid p69-1, complete sequence	0 crisprs	cas3,csa3,RT	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4239 : 100237

112

Escherichia_phage(45.24%)

integrase,protease,transposase

attL 3550:3564|attR 55989:56003

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3550:3564	attL	NA	NA	NA	NA
WP_013214009.1\|4239_5019_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
WP_013214010.1\|5064_5322_-	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|6099_6966_+	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_011977818.1\|8075_9281_+	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
WP_086523286.1\|9277_10255_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
WP_013214011.1\|10336_11608_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	7.5e-152	63.7
WP_001568036.1\|11607_12039_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
WP_004152765.1\|12448_13933_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004152353.1\|14181_15153_+	mediator of plasmid stability	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_013214012.1\|15155_15827_+	mediator of plasmid stability	NA	NA	NA	NA
WP_001568040.1\|15889_16120_+	hypothetical protein	NA	NA	NA	NA
WP_001568041.1\|16556_17258_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
WP_001568042.1\|17257_17479_+	hypothetical protein	NA	NA	NA	NA
WP_001568043.1\|17488_17908_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_013214013.1\|17961_18729_+	hypothetical protein	NA	NA	NA	NA
WP_013023797.1\|19172_19838_+	DUF1472 domain-containing protein	NA	NA	NA	NA
WP_013214014.1\|19880_20387_+	antirestriction protein	G9FHQ1	Rhodococcus_virus	1.2e-07	31.4
WP_001568047.1\|20429_20621_+	hypothetical protein	NA	NA	NA	NA
WP_011977779.1\|20808_21063_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.0e-12	48.8
WP_001568049.1\|21097_21418_+	hypothetical protein	NA	NA	NA	NA
WP_001568050.1\|22097_22325_+	hypothetical protein	NA	NA	NA	NA
WP_001568051.1\|22416_22647_+	hypothetical protein	NA	NA	NA	NA
WP_014343515.1\|22698_24054_+	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_014343514.1\|24101_24665_+	methyltransferase	A0A2I7RHK4	Vibrio_phage	7.4e-19	34.3
WP_014343512.1\|25497_26040_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	4.6e-50	76.7
WP_001568055.1\|26088_26337_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_015493064.1\|26406_28464_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.2e-21	25.4
WP_001568057.1\|28508_28940_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001568058.1\|28936_29665_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_013023807.1\|29661_29988_+	hypothetical protein	NA	NA	NA	NA
WP_014343510.1\|30043_30418_+	hypothetical protein	NA	NA	NA	NA
WP_014343509.1\|30645_30804_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_040245921.1\|31496_31769_+	hypothetical protein	NA	NA	NA	NA
WP_040245917.1\|31765_32116_+	hypothetical protein	NA	NA	NA	NA
WP_014343505.1\|32130_32448_+	hypothetical protein	NA	NA	NA	NA
WP_014343501.1\|33288_33645_+	hypothetical protein	A0A248SL90	Klebsiella_phage	7.5e-25	58.1
WP_014343500.1\|33705_33918_+	hypothetical protein	NA	NA	NA	NA
WP_014343499.1\|33928_34153_+	hypothetical protein	NA	NA	NA	NA
WP_014343498.1\|34233_34554_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.5e-08	39.5
WP_004152721.1\|34543_34822_+	helix-turn-helix transcriptional regulator	O64356	Escherichia_phage	2.5e-07	39.4
WP_001067855.1\|35507_36212_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_015493085.1\|36540_37491_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
WP_015493086.1\|37487_38099_-	DUF2913 family protein	NA	NA	NA	NA
WP_015493087.1\|38095_38491_-	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|39004_39985_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_042934582.1\|40636_41194_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|41662_42367_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001011939.1\|42499_43141_-	type A-2 chloramphenicol O-acetyltransferase CatII	G3CFL0	Escherichia_phage	7.3e-55	45.9
WP_001239317.1\|43290_43791_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|43870_44575_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001044210.1\|44580_44721_+	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|45206_45944_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|45940_46165_+	hypothetical protein	NA	NA	NA	NA
WP_000954592.1\|46286_46463_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_000427619.1\|46644_47649_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001067855.1\|49506_50211_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012579081.1\|51961_52885_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
WP_013188475.1\|52964_53840_-	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
WP_001067855.1\|54350_55055_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001398199.1\|56365_56767_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
55989:56003	attR	NA	NA	NA	NA
WP_000557619.1\|56699_56957_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_000616807.1\|57049_57703_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_142295464.1\|58641_59499_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_001375168.1\|59491_59566_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_000083837.1\|59810_60059_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_001312851.1\|60342_60492_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_001736714.1\|60796_61027_-	hypothetical protein	NA	NA	NA	NA
WP_032083981.1\|61190_61790_-	hypothetical protein	NA	NA	NA	NA
WP_015059022.1\|62175_62376_-	hypothetical protein	NA	NA	NA	NA
WP_000139328.1\|62507_63068_-	fertility inhibition protein FinO	NA	NA	NA	NA
WP_000205770.1\|63122_63869_-	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	4.2e-09	30.9
WP_001067855.1\|64113_64818_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|66249_66954_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|68064_68769_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000957857.1\|69446_69635_-	hypothetical protein	NA	NA	NA	NA
WP_064441864.1\|69726_70263_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
WP_000027057.1\|70445_71306_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_012372818.1\|71475_72231_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_001067858.1\|72680_73385_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_071557810.1\|73375_73516_+	hypothetical protein	NA	NA	NA	NA
WP_001333089.1\|75326_75608_+	hypothetical protein	NA	NA	NA	NA
WP_000361389.1\|75730_76081_-	protein stbB	NA	NA	NA	NA
WP_000959884.1\|76083_77046_-	plasmid segregation protein ParM	A0A222YXF2	Escherichia_phage	4.1e-94	53.9
WP_032146011.1\|77192_77486_+	hypothetical protein	NA	NA	NA	NA
WP_000085883.1\|77562_78246_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.6e-29	37.4
WP_001104881.1\|78246_78468_+	hypothetical protein	NA	NA	NA	NA
WP_000274503.1\|78481_78916_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_011161242.1\|79615_80188_+	YubH family protein	NA	NA	NA	NA
WP_001198928.1\|80160_80586_+	antirestriction protein	NA	NA	NA	NA
WP_000271762.1\|80632_81055_+	DUF1380 family protein	NA	NA	NA	NA
WP_001027493.1\|81051_81243_+	hypothetical protein	NA	NA	NA	NA
WP_012372796.1\|81556_83224_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-164	53.3
WP_000218642.1\|84623_84854_+	hypothetical protein	NA	NA	NA	NA
WP_000170695.1\|84905_86267_+	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_015059007.1\|86313_86877_+	class I SAM-dependent methyltransferase	A8HNV9	Thalassomonas_phage	6.1e-21	37.3
WP_000290834.1\|87731_88259_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	6.0e-47	74.4
WP_000006003.1\|88316_88550_+	DUF905 family protein	NA	NA	NA	NA
WP_000845953.1\|90702_91137_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001276217.1\|91133_91853_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001312861.1\|92132_92291_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_001272251.1\|93205_93502_+	hypothetical protein	NA	NA	NA	NA
WP_001234445.1\|93612_94434_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	3.4e-44	38.2
WP_015059008.1\|94730_95378_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_000124981.1\|95654_96038_+	relaxosome protein TraM	NA	NA	NA	NA
WP_015059009.1\|96228_96915_+	PAS domain-containing protein	NA	NA	NA	NA
WP_001254386.1\|97008_97236_+	conjugal transfer relaxosome protein TraY	NA	NA	NA	NA
WP_021519752.1\|97269_97635_+	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
WP_000012106.1\|97649_97961_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_000399794.1\|97982_98549_+	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_072095570.1\|98559_99264_+	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_101307356.1\|99263_99521_+	conjugal transfer protein TraB	NA	NA	NA	NA
WP_001067855.1\|99532_100237_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP025456

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025456_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025456_1

848411-848496

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025456_1

>merge|NZ_CP025456|1|848411-848496|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP025456|1|1|848411-848496|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025456.1\|WP_002888357.1\|857883_859386_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP025456.1\|WP_002888321.1\|838116_838965_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP025456.1\|WP_002888324.1\|839349_840171_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP025456.1\|WP_002888345.1\|848593_849958_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP025456.1\|WP_002888340.1\|846643_848269_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP025456.1\|WP_002888332.1\|845095_845923_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP025456.1\|WP_002888327.1\|840167_841157_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP025456.1\|WP_002888337.1\|845955_846654_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP025456.1\|WP_002888347.1\|850137_850677_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP025456.1\|WP_002888348.1\|850751_851411_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP025456.1\|WP_004151368.1\|851423_854330_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP025456.1\|WP_004147026.1\|842503_844852_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP025456.1\|WP_002888373.1\|862417_863185_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP025456.1\|WP_002888368.1\|859396_861106_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP025456.1\|WP_002888320.1\|837381_837861_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP025456.1\|WP_002888329.1\|841162_842449_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP025456.1\|WP_002888370.1\|861443_862289_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP025456.1\|WP_002888353.1\|857050_857746_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP025456.1\|WP_002888323.1\|838969_839347_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP025456.1\|WP_002888349.1\|854517_856875_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595

Protein	Function_ID	Function_description	E-value
NZ_CP025456.1\|WP_002888357.1\|857883_859386_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP025456.1\|WP_002888321.1\|838116_838965_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP025456.1\|WP_002888324.1\|839349_840171_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP025456.1\|WP_002888345.1\|848593_849958_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP025456.1\|WP_002888340.1\|846643_848269_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP025456.1\|WP_002888332.1\|845095_845923_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP025456.1\|WP_002888327.1\|840167_841157_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP025456.1\|WP_002888337.1\|845955_846654_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP025456.1\|WP_002888347.1\|850137_850677_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP025456.1\|WP_002888348.1\|850751_851411_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP025456.1\|WP_004151368.1\|851423_854330_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP025456.1\|WP_004147026.1\|842503_844852_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP025456.1\|WP_002888373.1\|862417_863185_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP025456.1\|WP_002888368.1\|859396_861106_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP025456.1\|WP_002888320.1\|837381_837861_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP025456.1\|WP_002888329.1\|841162_842449_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP025456.1\|WP_002888370.1\|861443_862289_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP025456.1\|WP_002888353.1\|857050_857746_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP025456.1\|WP_002888323.1\|838969_839347_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP025456.1\|WP_002888349.1\|854517_856875_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0

>NZ_CP025456.1|WP_002888340.1|846643_848269_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP025456.1|WP_002888337.1|845955_846654_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP025456.1|WP_002888332.1|845095_845923_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP025456.1|WP_004147026.1|842503_844852_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP025456.1|WP_002888329.1|841162_842449_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP025456.1|WP_002888327.1|840167_841157_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP025456.1|WP_002888324.1|839349_840171_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP025456.1|WP_002888323.1|838969_839347_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP025456.1|WP_002888321.1|838116_838965_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP025456.1|WP_002888320.1|837381_837861_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP025456.1|WP_002888345.1|848593_849958_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP025456.1|WP_002888347.1|850137_850677_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP025456.1|WP_002888348.1|850751_851411_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP025456.1|WP_004151368.1|851423_854330_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP025456.1|WP_002888349.1|854517_856875_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP025456.1|WP_002888353.1|857050_857746_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP025456.1|WP_002888357.1|857883_859386_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP025456.1|WP_002888368.1|859396_861106_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP025456.1|WP_002888370.1|861443_862289_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP025456.1|WP_002888373.1|862417_863185_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP025456_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025456_2

1670027-1670104

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025456_2

>merge|NZ_CP025456|2|1670027-1670104|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP025456|2|2|1670027-1670104|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025456.1\|WP_002895358.1\|1663917_1664643_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP025456.1\|WP_002895578.1\|1670803_1672093_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP025456.1\|WP_004151700.1\|1673343_1674501_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP025456.1\|WP_004151699.1\|1664785_1666474_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP025456.1\|WP_004151697.1\|1661685_1662903_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP025456.1\|WP_002895280.1\|1657055_1657268_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313818
NZ_CP025456.1\|WP_004152853.1\|1675896_1676619_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP025456.1\|WP_002895580.1\|1672306_1673347_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP025456.1\|WP_004151698.1\|1662899_1663856_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP025456.1\|WP_002895575.1\|1670256_1670733_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP025456.1\|WP_002895284.1\|1658526_1659450_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP025456.1\|WP_002895420.1\|1666470_1667997_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP025456.1\|WP_004151701.1\|1679528_1679621_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025456.1\|WP_004151696.1\|1660145_1661429_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP025456.1\|WP_002895648.1\|1675232_1675955_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP025456.1\|WP_004147672.1\|1668095_1669478_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP025456.1\|WP_004142100.1\|1674484_1675240_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP025456.1\|WP_002895655.1\|1677329_1679351_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP025456.1\|WP_002895652.1\|1676705_1676918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025456.1\|WP_002895283.1\|1658003_1658510_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP025456.1\|WP_002895358.1\|1663917_1664643_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP025456.1\|WP_002895578.1\|1670803_1672093_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP025456.1\|WP_004151700.1\|1673343_1674501_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP025456.1\|WP_004151699.1\|1664785_1666474_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP025456.1\|WP_004151697.1\|1661685_1662903_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP025456.1\|WP_002895280.1\|1657055_1657268_-\|hypothetical-protein	gnl\|CDD\|313818	pfam10684, BDM, Putative biofilm-dependent modulation protein. This is a family of tightly conserved proteins from Enterobacteriaceae which are annotated as being biofilm-dependent modulation protein homologs.	0.00154989
NZ_CP025456.1\|WP_004152853.1\|1675896_1676619_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP025456.1\|WP_002895580.1\|1672306_1673347_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP025456.1\|WP_004151698.1\|1662899_1663856_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP025456.1\|WP_002895575.1\|1670256_1670733_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP025456.1\|WP_002895284.1\|1658526_1659450_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
NZ_CP025456.1\|WP_002895420.1\|1666470_1667997_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP025456.1\|WP_004151696.1\|1660145_1661429_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP025456.1\|WP_002895648.1\|1675232_1675955_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP025456.1\|WP_004147672.1\|1668095_1669478_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP025456.1\|WP_004142100.1\|1674484_1675240_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP025456.1\|WP_002895655.1\|1677329_1679351_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0

>NZ_CP025456.1|WP_004147672.1|1668095_1669478_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP025456.1|WP_002895420.1|1666470_1667997_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP025456.1|WP_004151699.1|1664785_1666474_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP025456.1|WP_002895358.1|1663917_1664643_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP025456.1|WP_004151698.1|1662899_1663856_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP025456.1|WP_004151697.1|1661685_1662903_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP025456.1|WP_004151696.1|1660145_1661429_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP025456.1|WP_002895284.1|1658526_1659450_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP025456.1|WP_002895283.1|1658003_1658510_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP025456.1|WP_002895280.1|1657055_1657268_-|hypothetical-protein
MHIKNTIPAEFVFNSALMKNIENTLIKQHRTVNNERMITEIQHRLQTESNEILSDLYLQALDMLYSKPHH
>NZ_CP025456.1|WP_002895575.1|1670256_1670733_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP025456.1|WP_002895578.1|1670803_1672093_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP025456.1|WP_002895580.1|1672306_1673347_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP025456.1|WP_004151700.1|1673343_1674501_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP025456.1|WP_004142100.1|1674484_1675240_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP025456.1|WP_002895648.1|1675232_1675955_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP025456.1|WP_004152853.1|1675896_1676619_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP025456.1|WP_002895652.1|1676705_1676918_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP025456.1|WP_002895655.1|1677329_1679351_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP025456.1|WP_004151701.1|1679528_1679621_+|hypothetical-protein
MQKINFREYLAVATALVIIVAFFHQWVLTF

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

619160 : 631916

Enterobacteria_phage(62.5%)

integrase,transposase

attL 616958:616972|attR 622192:622206

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
616958:616972	attL	NA	NA	NA	NA
WP_004152198.1\|619160_620423_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	8.2e-74	40.7
WP_073547088.1\|620480_621317_-	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|621298_622279_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
622192:622206	attR	NA	NA	NA	NA
WP_158295150.1\|622275_622584_-	hypothetical protein	NA	NA	NA	NA
WP_094818702.1\|622534_623050_-	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|623094_624075_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_004152201.1\|624271_625351_-	hypothetical protein	NA	NA	NA	NA
WP_004152202.1\|626091_626658_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152203.1\|626675_626921_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152204.1\|626917_627655_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_004153681.1\|628478_629027_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_004152205.1\|629023_629251_+	hypothetical protein	NA	NA	NA	NA
WP_004152206.1\|629247_629568_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152207.1\|629582_631916_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9

DBSCAN-SWA_2

1100148 : 1111801

Enterobacteria_phage(70.0%)

integrase

attL 1088282:1088296|attR 1111338:1111352

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1088282:1088296	attL	NA	NA	NA	NA
WP_002889890.1\|1100148_1102482_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|1102493_1102814_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889911.1\|1102810_1103038_-	hypothetical protein	NA	NA	NA	NA
WP_024940872.1\|1103034_1103592_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|1103588_1103855_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_062956184.1\|1104396_1105134_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
WP_004152203.1\|1105130_1105376_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152202.1\|1105393_1105960_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152979.1\|1106527_1106953_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|1106952_1107903_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|1107890_1109081_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|1109433_1110687_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|1110697_1111801_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
1111338:1111352	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1763600 : 1800936

Salmonella_phage(84.62%)

tail,integrase,portal,head,plate,terminase,capsid,lysis

attL 1763508:1763526|attR 1801008:1801026

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1763508:1763526	attL	NA	NA	NA	NA
WP_004151720.1\|1763600_1764653_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
WP_004152765.1\|1765071_1766556_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004150866.1\|1766654_1767599_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|1767610_1768489_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_000188448.1\|1768634_1768856_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|1768888_1769398_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|1769405_1769606_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|1769569_1769911_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_004150864.1\|1769978_1770212_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752622.1\|1770211_1770439_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150863.1\|1770435_1771293_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_004150862.1\|1771289_1773704_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154434.1\|1773857_1774046_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1774056_1774290_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|1774404_1775082_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|1775357_1777100_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|1777161_1778187_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|1778186_1779953_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|1780095_1780929_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|1780945_1782004_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|1782007_1782658_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|1782753_1783218_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|1783217_1783421_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|1783424_1783640_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|1783620_1784130_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|1784134_1784518_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|1784514_1784943_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896172.1\|1785038_1785470_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|1785462_1785909_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004150857.1\|1785905_1786598_-	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|1786692_1787265_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_032441567.1\|1787261_1787624_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
WP_002896182.1\|1787610_1788519_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|1788511_1789111_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|1789112_1792064_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|1792067_1792799_+	hypothetical protein	NA	NA	NA	NA
WP_002896188.1\|1792795_1792999_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|1793028_1794105_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|1794243_1795416_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|1795425_1795941_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|1795993_1796293_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|1796307_1796427_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896222.1\|1796419_1799047_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896224.1\|1799043_1799529_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|1799525_1800626_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|1800717_1800936_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
1801008:1801026	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1835352 : 1844816

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|1835352_1836468_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|1836464_1838405_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|1838481_1838703_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|1839028_1839346_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|1839376_1841656_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|1841776_1841995_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|1842348_1843050_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|1843094_1844816_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_5

2072883 : 2161593

Klebsiella_phage(44.19%)

tail,integrase,portal,head,terminase,capsid,lysis,tRNA

attL 2069192:2069206|attR 2128132:2128146

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2069192:2069206	attL	NA	NA	NA	NA
WP_004150803.1\|2072883_2073990_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004150802.1\|2074046_2074505_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004150801.1\|2074521_2075172_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150800.1\|2075412_2076663_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_032418030.1\|2076780_2077908_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	4.4e-119	58.4
WP_012542206.1\|2077888_2078134_-	excisionase	NA	NA	NA	NA
WP_062954978.1\|2078186_2080325_-	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	5.6e-99	42.7
WP_014228879.1\|2080466_2080811_-	transcriptional regulator	NA	NA	NA	NA
WP_023279538.1\|2080853_2081048_-	DUF1482 family protein	NA	NA	NA	NA
WP_040234937.1\|2081438_2081753_+	hypothetical protein	NA	NA	NA	NA
WP_077257742.1\|2082074_2082512_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
WP_071561166.1\|2082600_2082825_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
WP_046622349.1\|2082827_2083382_+	hypothetical protein	NA	NA	NA	NA
WP_094818708.1\|2083441_2084446_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.4e-31	40.0
WP_047667474.1\|2084438_2084903_+	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
WP_032443841.1\|2084916_2085357_+	hypothetical protein	NA	NA	NA	NA
WP_062954977.1\|2085705_2087097_-	hypothetical protein	NA	NA	NA	NA
WP_062954976.1\|2089183_2089897_+	hypothetical protein	NA	NA	NA	NA
WP_062954975.1\|2090070_2091432_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
WP_004152765.1\|2092272_2093757_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_025368263.1\|2093835_2094069_+	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
WP_077255782.1\|2094080_2094371_+	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
WP_025861428.1\|2094411_2094804_+	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
WP_062955112.1\|2095003_2096035_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
WP_025861432.1\|2096051_2096654_+	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
WP_004147997.1\|2096897_2097101_-	hypothetical protein	NA	NA	NA	NA
WP_004147999.1\|2097838_2097988_-	small membrane protein	NA	NA	NA	NA
WP_016160648.1\|2098905_2099121_+\|lysis	phage S lysis protein	A5LH82	Enterobacteria_phage	2.7e-30	88.7
WP_032432826.1\|2099120_2099618_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
WP_016160650.1\|2099614_2099965_+	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
WP_049115059.1\|2100914_2101352_+	hypothetical protein	NA	NA	NA	NA
WP_032749552.1\|2101390_2101615_-	hypothetical protein	NA	NA	NA	NA
WP_032428746.1\|2101941_2102304_+	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
WP_023297386.1\|2102255_2102579_+	hypothetical protein	NA	NA	NA	NA
WP_014907818.1\|2102575_2103007_+	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
WP_012542168.1\|2103255_2103690_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_021462603.1\|2103689_2105411_+\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
WP_017898992.1\|2105404_2105584_+	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_012542166.1\|2105583_2106843_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.8e-223	90.2
WP_064147921.1\|2106879_2107800_+	S49 family peptidase	Q6UAX7	Klebsiella_phage	5.6e-149	88.2
WP_101963432.1\|2107877_2109164_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	1.3e-204	83.9
WP_101963433.1\|2109222_2109537_+	hypothetical protein	Q6UAX5	Klebsiella_phage	1.1e-19	81.5
WP_020317538.1\|2109517_2109835_+\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
WP_023328092.1\|2109831_2110170_+\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
WP_017880258.1\|2110150_2110540_+	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
WP_023328091.1\|2110536_2110938_+	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
WP_023328090.1\|2110969_2111431_+	hypothetical protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_014228914.1\|2111488_2111854_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_023328089.1\|2112086_2115422_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
WP_094818667.1\|2115421_2115760_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	4.9e-58	89.3
WP_023289191.1\|2115756_2116512_+\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	2.7e-125	80.9
WP_032439857.1\|2116513_2117224_+	peptidase P60	Q6UAW4	Klebsiella_phage	3.8e-137	91.1
WP_025368256.1\|2117265_2117688_+	hypothetical protein	J9Q806	Salmonella_phage	2.9e-28	49.3
WP_017899002.1\|2117714_2118308_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	77.2
WP_094818668.1\|2118370_2131075_+	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.0
2128132:2128146	attR	NA	NA	NA	NA
WP_101963434.1\|2131143_2132640_+\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.1
WP_004892953.1\|2132794_2132947_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_094818697.1\|2133219_2133933_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004150798.1\|2133929_2134322_-	amino acid-binding protein	NA	NA	NA	NA
WP_004150797.1\|2134314_2134638_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004140530.1\|2135074_2135302_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004140529.1\|2135414_2136608_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004150795.1\|2137229_2137415_+	general stress protein	NA	NA	NA	NA
WP_004150794.1\|2137505_2138000_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140514.1\|2138026_2138533_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140512.1\|2138549_2139437_+	manganese catalase family protein	NA	NA	NA	NA
WP_004150793.1\|2139492_2140899_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140509.1\|2140895_2141906_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140506.1\|2142021_2142219_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|2142785_2143418_+	DNA-binding protein	NA	NA	NA	NA
WP_153233540.1\|2143396_2143585_-	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|2144034_2144721_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004140497.1\|2145031_2146540_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150788.1\|2146660_2147551_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004150787.1\|2147557_2149342_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150785.1\|2149415_2150624_-	HD domain-containing protein	NA	NA	NA	NA
WP_004150784.1\|2150926_2151970_+	type II asparaginase	NA	NA	NA	NA
WP_004148038.1\|2152631_2153546_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150783.1\|2153635_2154274_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004140489.1\|2154404_2154668_+	DUF2534 family protein	NA	NA	NA	NA
WP_004140488.1\|2154727_2154853_-	hypothetical protein	NA	NA	NA	NA
WP_099119317.1\|2154970_2155045_-	protein YoaJ	NA	NA	NA	NA
WP_004150782.1\|2155044_2155146_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_004150781.1\|2155203_2156217_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
WP_004150780.1\|2156517_2156757_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004150779.1\|2156746_2157103_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_004150778.1\|2157089_2157599_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004140471.1\|2157744_2158437_+	CTP synthase	NA	NA	NA	NA
WP_004150777.1\|2158468_2159653_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_002901073.1\|2159754_2160546_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901080.1\|2160529_2160976_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_002901088.1\|2161092_2161593_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_6

2290464 : 2321348

Enterobacteria_phage(36.67%)

holin,integrase,transposase

attL 2282442:2282457|attR 2305281:2305296

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2282442:2282457	attL	NA	NA	NA	NA
WP_004140269.1\|2290464_2291274_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
WP_004140266.1\|2291275_2292268_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004151901.1\|2292267_2293158_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_004153574.1\|2293334_2294522_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
WP_004151899.1\|2294729_2295392_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
WP_004151898.1\|2295388_2295817_-	hypothetical protein	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
WP_004201102.1\|2295813_2296494_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
WP_088224434.1\|2296495_2296783_-	hypothetical protein	NA	NA	NA	NA
WP_004201103.1\|2296779_2297625_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
WP_004201105.1\|2297640_2297925_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
WP_004135674.1\|2298013_2298208_-	hypothetical protein	NA	NA	NA	NA
WP_004201108.1\|2298636_2298840_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
WP_004201109.1\|2298921_2299998_-	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
WP_019405077.1\|2300143_2300263_-	hypothetical protein	NA	NA	NA	NA
WP_004201113.1\|2300285_2300984_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
WP_004201115.1\|2301095_2301323_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_001548453.1\|2301363_2301585_+	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004201117.1\|2301670_2302531_+	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
WP_004201118.1\|2302527_2303376_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
WP_004218528.1\|2303372_2303675_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004196831.1\|2303730_2303976_+	hypothetical protein	NA	NA	NA	NA
WP_004218530.1\|2304183_2305212_-	hypothetical protein	NA	NA	NA	NA
WP_004218531.1\|2305732_2306200_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
2305281:2305296	attR	NA	NA	NA	NA
WP_004243010.1\|2306180_2306348_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
WP_004218532.1\|2306344_2307013_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
WP_004218533.1\|2307005_2307644_+	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
WP_004218534.1\|2307640_2307781_+	YlcG family protein	NA	NA	NA	NA
WP_004232548.1\|2307780_2308470_+	antiterminator-like protein	I6PDF8	Cronobacter_phage	2.1e-55	53.1
WP_024940884.1\|2309119_2309419_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_004218565.1\|2309415_2309955_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
WP_001067855.1\|2310126_2310831_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001261740.1\|2311812_2312604_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|2312767_2313115_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001067855.1\|2313730_2314435_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004152776.1\|2315016_2315439_+	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
WP_004152765.1\|2316336_2317821_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_002901812.1\|2317900_2318320_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
WP_002901813.1\|2318321_2319587_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.6e-208	82.7
WP_071531199.1\|2319662_2320490_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
WP_002901815.1\|2320676_2321348_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6

DBSCAN-SWA_7

2354281 : 2392747

uncultured_Caudovirales_phage(34.04%)

integrase,terminase

attL 2352362:2352376|attR 2361302:2361316

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2352362:2352376	attL	NA	NA	NA	NA
WP_004152144.1\|2354281_2355043_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|2355259_2356792_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|2356990_2357539_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|2357735_2358917_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|2358897_2359140_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152149.1\|2359318_2359798_-	hypothetical protein	NA	NA	NA	NA
WP_004152150.1\|2359794_2360007_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152151.1\|2360003_2360228_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|2360217_2360928_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|2360933_2361452_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
2361302:2361316	attR	NA	NA	NA	NA
WP_004152154.1\|2361556_2362384_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|2362380_2362575_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|2362571_2362997_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004177208.1\|2362993_2363212_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_004152157.1\|2363183_2363438_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004152158.1\|2363430_2363796_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152159.1\|2363965_2364154_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|2364146_2364461_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|2364631_2365300_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|2365397_2365619_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|2366195_2367854_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004198233.1\|2367855_2368818_+	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|2368814_2369291_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|2369287_2370070_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004146526.1\|2370475_2370724_+	hypothetical protein	NA	NA	NA	NA
WP_004152169.1\|2370726_2371257_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|2371253_2371643_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|2371877_2372198_+	hypothetical protein	NA	NA	NA	NA
WP_004152171.1\|2372299_2373052_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152172.1\|2373002_2374403_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152173.1\|2374640_2376092_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|2376147_2376696_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|2376747_2377950_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|2377953_2378448_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_001132269.1\|2378459_2379401_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000725700.1\|2379440_2379722_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|2379690_2380110_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|2380106_2380613_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|2380612_2380999_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|2381093_2381534_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|2381537_2382683_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004199809.1\|2382693_2383134_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152564.1\|2383137_2383563_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|2383598_2383751_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|2383740_2385744_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152567.1\|2385743_2386343_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152568.1\|2386343_2386646_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152569.1\|2386648_2387671_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|2387670_2388012_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004199301.1\|2388061_2388244_+	hypothetical protein	NA	NA	NA	NA
WP_004152571.1\|2388286_2388853_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|2388906_2389560_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|2389561_2389915_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|2389914_2391111_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|2391107_2391881_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152576.1\|2391880_2392747_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5

DBSCAN-SWA_8

2594228 : 2602305

Escherichia_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152236.1\|2594228_2594837_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	3.2e-23	35.3
WP_002903710.1\|2594878_2595736_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	9.0e-24	35.9
WP_004152235.1\|2595737_2596355_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.6e-73	58.1
WP_001067855.1\|2596497_2597202_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_094818672.1\|2597238_2599629_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.2e-203	48.3
WP_002903714.1\|2599779_2600049_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_004219441.1\|2600150_2600861_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_002903719.1\|2600854_2601415_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_002903720.1\|2601492_2601834_-	DUF1283 family protein	NA	NA	NA	NA
WP_002903722.1\|2601978_2602305_+	YnfA family protein	A0A218MNG8	uncultured_virus	1.1e-22	54.9

DBSCAN-SWA_9

2622271 : 2633158

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|2622271_2622892_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|2622884_2624150_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_004151610.1\|2624161_2625064_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_002210513.1\|2625324_2626086_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|2626106_2626967_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002904006.1\|2627264_2627525_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620097.1\|2627611_2628700_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004151612.1\|2628730_2629996_-	MFS transporter	NA	NA	NA	NA
WP_004151613.1\|2630050_2633158_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_10

3303833 : 3362991

Staphylococcus_phage(28.57%)

tRNA,transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175544.1\|3303833_3304418_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_004148779.1\|3304535_3305627_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_004200293.1\|3305707_3306037_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|3306120_3307035_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004200294.1\|3307166_3308582_-	membrane protein	NA	NA	NA	NA
WP_004175538.1\|3308601_3309045_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004189400.1\|3309047_3309590_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025403903.1\|3309564_3310611_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004200296.1\|3310610_3312374_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004200298.1\|3312431_3315920_-	hypothetical protein	NA	NA	NA	NA
WP_004198077.1\|3315903_3317061_-	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|3317064_3317331_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_062955036.1\|3317573_3318083_-	hypothetical protein	NA	NA	NA	NA
WP_062955037.1\|3318079_3318400_-	hypothetical protein	NA	NA	NA	NA
WP_062955038.1\|3318584_3319094_-	hypothetical protein	NA	NA	NA	NA
WP_062955039.1\|3319187_3319556_-	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|3319552_3319882_-	hypothetical protein	NA	NA	NA	NA
WP_021464429.1\|3319878_3320061_-	hypothetical protein	NA	NA	NA	NA
WP_004175505.1\|3320061_3321417_-	hypothetical protein	NA	NA	NA	NA
WP_002910586.1\|3321710_3322220_-	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|3322456_3322963_-	hypothetical protein	NA	NA	NA	NA
WP_002910593.1\|3322959_3323469_-	hypothetical protein	NA	NA	NA	NA
WP_073547072.1\|3323469_3324393_-	S-type Pyocin	NA	NA	NA	NA
WP_063048274.1\|3325200_3325602_-	hypothetical protein	NA	NA	NA	NA
WP_099143948.1\|3326395_3326911_-	hypothetical protein	NA	NA	NA	NA
WP_000019473.1\|3327077_3328058_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_062955013.1\|3329490_3331977_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_062955014.1\|3332435_3334133_-	OmpA family protein	NA	NA	NA	NA
WP_062955015.1\|3334136_3334790_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004200314.1\|3334786_3336127_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004200315.1\|3336364_3336631_-	hypothetical protein	NA	NA	NA	NA
WP_002910650.1\|3336694_3337024_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004899028.1\|3337093_3337678_+	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_014907357.1\|3337703_3338402_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910657.1\|3338592_3339075_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|3339184_3340084_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152314.1\|3340058_3340865_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004175494.1\|3340879_3342175_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
WP_004189341.1\|3342478_3343405_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004189338.1\|3343503_3343980_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004148802.1\|3344029_3345673_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910720.1\|3345956_3346850_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175491.1\|3346855_3347575_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.0
WP_004148803.1\|3347571_3348447_-	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	1.5e-10	25.5
WP_004148804.1\|3348443_3349730_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_004175489.1\|3349739_3350654_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_062955016.1\|3350763_3351879_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_062955027.1\|3352309_3354604_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	3.0e-159	41.7
WP_094818704.1\|3354632_3355841_-	propionate kinase	NA	NA	NA	NA
WP_004145486.1\|3355868_3357200_-	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_002910762.1\|3357225_3358215_-	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_002910764.1\|3358308_3359250_-	transcriptional regulator TdcA	NA	NA	NA	NA
WP_002910767.1\|3359866_3360040_+	hypothetical protein	NA	NA	NA	NA
WP_009484363.1\|3360026_3360827_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_050597911.1\|3360819_3361833_-	fatty acid desaturase	NA	NA	NA	NA
WP_002910830.1\|3362244_3362991_-\|protease	proteasome-type protease	NA	NA	NA	NA

DBSCAN-SWA_11

3617638 : 3634584

Escherichia_phage(38.46%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062955125.1\|3617638_3618970_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.9e-15	29.1
WP_062955124.1\|3618959_3619793_-	ABC transporter permease	NA	NA	NA	NA
WP_015958692.1\|3619821_3620652_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_015958693.1\|3620738_3621293_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_048996045.1\|3621307_3622198_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_063002077.1\|3622229_3623099_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_073547076.1\|3623112_3624177_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
WP_062955151.1\|3625016_3626021_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	4.0e-31	29.2
WP_000019445.1\|3626486_3627467_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_016947628.1\|3627621_3627741_+	small membrane protein	NA	NA	NA	NA
WP_000704907.1\|3628169_3629336_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
WP_004175260.1\|3629515_3630070_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_048996045.1\|3630084_3630975_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_062956182.1\|3631006_3631876_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.4e-111	67.4
WP_062955056.1\|3631889_3632954_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	54.7
WP_062955058.1\|3633177_3634584_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.6e-38	28.7

DBSCAN-SWA_12

3676518 : 3683424

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062955084.1\|3676518_3677997_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|3677993_3678716_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|3679034_3680396_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_002912636.1\|3680641_3681535_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004899467.1\|3681776_3682550_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004175147.1\|3682560_3683424_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_13

3984673 : 4061833

Salmonella_phage(38.89%)

tail,integrase,protease,transposase,holin,terminase,tRNA

attL 3990315:3990332|attR 4060822:4060839

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152006.1\|3984673_3986677_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_002913800.1\|3986686_3987562_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_002913801.1\|3987681_3988395_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.1e-38	35.7
WP_002913802.1\|3988610_3989645_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_002913803.1\|3989661_3990540_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
3990315:3990332	attL	NA	NA	NA	NA
WP_004145648.1\|3990627_3991260_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_002913805.1\|3991263_3991734_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_002913806.1\|3991795_3992857_-	AI-2E family transporter	NA	NA	NA	NA
WP_002913807.1\|3993079_3994543_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_002913810.1\|3994552_3994912_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_002913812.1\|3995039_3995951_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
WP_020947395.1\|3995947_3996649_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913824.1\|3996747_3998034_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_002913827.1\|3998129_3998756_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913829.1\|3998973_4000407_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913833.1\|4000416_4001310_-	ROK family protein	NA	NA	NA	NA
WP_002913836.1\|4001573_4002611_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_004152007.1\|4002607_4003249_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
WP_002913838.1\|4003429_4005490_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_002913839.1\|4005493_4007026_+	exopolyphosphatase	NA	NA	NA	NA
WP_002913841.1\|4007079_4009308_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_002913843.1\|4009660_4009852_+	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
WP_002913846.1\|4009948_4010836_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002913847.1\|4010933_4012166_+	MFS transporter	NA	NA	NA	NA
WP_004162150.1\|4012459_4013638_+	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_004152009.1\|4013621_4015490_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_094818609.1\|4015686_4016184_-	DUF2514 family protein	A0A193GYU6	Enterobacter_phage	2.1e-57	73.3
WP_094818610.1\|4016180_4016810_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	8.1e-91	77.0
WP_023339240.1\|4016799_4017105_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
WP_062955010.1\|4017091_4017496_-	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
WP_142295460.1\|4017740_4018013_+	hypothetical protein	NA	NA	NA	NA
WP_094818611.1\|4018045_4018297_-	hypothetical protein	NA	NA	NA	NA
WP_094818612.1\|4018293_4020507_-	hypothetical protein	A0A0U3DL17	Klebsiella_phage	8.9e-108	42.9
WP_094818613.1\|4020658_4020955_+	hypothetical protein	T1SA06	Salmonella_phage	3.1e-24	64.3
WP_004141317.1\|4021341_4021887_+	DUF2335 domain-containing protein	NA	NA	NA	NA
WP_158208721.1\|4021990_4022179_+	hypothetical protein	NA	NA	NA	NA
WP_094818614.1\|4022262_4022958_+	anti-repressor protein	A0A193GYJ9	Enterobacter_phage	2.6e-61	52.5
WP_025860592.1\|4023200_4023413_+	hypothetical protein	NA	NA	NA	NA
WP_048293155.1\|4023409_4023787_+	hypothetical protein	NA	NA	NA	NA
WP_094818615.1\|4024074_4024371_-	hypothetical protein	A0A2R9YJP3	Escherichia_phage	9.2e-45	90.6
WP_094818616.1\|4024415_4025030_-	hypothetical protein	NA	NA	NA	NA
WP_094818617.1\|4025039_4028429_-	hypothetical protein	G9L6D4	Escherichia_phage	5.3e-120	41.6
WP_024622832.1\|4028428_4031173_-	hypothetical protein	A0A193GYI3	Enterobacter_phage	7.4e-96	39.7
WP_004197440.1\|4031185_4031683_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	4.0e-24	43.6
WP_094818618.1\|4031675_4032146_-	hypothetical protein	Q858G2	Salmonella_phage	1.1e-44	54.6
WP_094818619.1\|4032147_4034625_-	hypothetical protein	G9L6D0	Escherichia_phage	2.8e-267	56.4
WP_004197381.1\|4034624_4035236_-	hypothetical protein	T1SAQ2	Salmonella_phage	9.2e-47	48.8
WP_024622837.1\|4035284_4035563_-	hypothetical protein	T1SA01	Salmonella_phage	1.1e-20	58.9
WP_004152466.1\|4035555_4035948_-	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_004197367.1\|4035957_4036965_-	bbp17	T1S9H9	Salmonella_phage	2.1e-181	92.8
WP_004221310.1\|4036977_4037364_-	peptidase	T1SAP9	Salmonella_phage	1.9e-34	58.6
WP_004152470.1\|4037690_4037996_-	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
WP_004149313.1\|4037992_4039672_-\|tail	tail protein	T1S9Z7	Salmonella_phage	3.6e-194	59.3
WP_004152472.1\|4039675_4039879_-	hypothetical protein	NA	NA	NA	NA
WP_040173633.1\|4040586_4040958_+	phage family protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.0e-61	94.3
WP_094818621.1\|4041002_4042478_-\|terminase	terminase	Q858H3	Salmonella_phage	4.2e-279	92.4
WP_094818622.1\|4042474_4043095_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	1.1e-76	73.2
WP_017896964.1\|4043152_4043482_-	hypothetical protein	K7PGV5	Enterobacterial_phage	3.0e-28	56.1
WP_004152765.1\|4043559_4045044_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_064106727.1\|4045467_4045806_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	6.4e-50	88.2
WP_094818683.1\|4045798_4046080_-	hypothetical protein	A0A220NQY7	Salmonella_phage	3.6e-06	41.2
WP_094818684.1\|4046072_4046831_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	5.8e-51	47.7
WP_029602865.1\|4047226_4047520_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
WP_072200041.1\|4047519_4047987_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
WP_032441401.1\|4048280_4048925_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
WP_032441402.1\|4048921_4049113_-	hypothetical protein	NA	NA	NA	NA
WP_062955107.1\|4049096_4049507_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
WP_048328152.1\|4049699_4050047_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
WP_032418532.1\|4050166_4050952_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_094818682.1\|4050948_4051716_-	primosomal protein	A0A193GZ86	Enterobacter_phage	9.8e-139	90.6
WP_004152537.1\|4051715_4051925_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_094818681.1\|4052071_4052305_-	hypothetical protein	T1SAR5	Salmonella_phage	7.0e-24	66.2
WP_004144290.1\|4052459_4053041_+	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
WP_004164029.1\|4053405_4053705_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_059065285.1\|4053701_4054601_+	endonuclease	Q858E0	Salmonella_phage	1.9e-157	91.0
WP_064148642.1\|4054610_4055633_+	recombination protein RecT	Q858E1	Salmonella_phage	1.4e-180	95.6
WP_004144294.1\|4055683_4055932_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	2.8e-31	78.0
WP_009485475.1\|4056041_4056335_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_094818680.1\|4056327_4056486_+	DUF1317 family protein	T1SAR0	Salmonella_phage	6.7e-18	82.4
WP_094818679.1\|4056482_4057076_+	adenine methylase	T1SA14	Salmonella_phage	3.7e-109	91.9
WP_032441415.1\|4057072_4057264_+	hypothetical protein	NA	NA	NA	NA
WP_094818678.1\|4057280_4058531_-\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	3.1e-206	85.1
WP_004151979.1\|4058721_4060299_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004151980.1\|4060366_4061833_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
4060822:4060839	attR	NA	NA	NA	NA

DBSCAN-SWA_14

4072053 : 4165464

Salmonella_phage(16.67%)

tail,integrase,protease,portal,head,holin,terminase,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002913894.1\|4072053_4073220_-\|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	NA	NA	NA	NA
WP_004144312.1\|4073703_4074135_-	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	1.7e-18	38.6
WP_004151983.1\|4074295_4076620_-	peptidoglycan glycosyltransferase PbpC	NA	NA	NA	NA
WP_004151984.1\|4076620_4081570_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_002913950.1\|4081775_4082633_+	3-mercaptopyruvate sulfurtransferase	NA	NA	NA	NA
WP_004188864.1\|4082859_4083702_+	hypothetical protein	NA	NA	NA	NA
WP_002913952.1\|4083772_4084549_-	enhanced serine sensitivity protein SseB	NA	NA	NA	NA
WP_002913953.1\|4084647_4085934_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	9.9e-35	37.8
WP_002913954.1\|4086004_4086205_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_002913956.1\|4086206_4086542_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_004151987.1\|4086543_4088394_-	Fe-S protein assembly chaperone HscA	F2Y2E1	Organic_Lake_phycodnavirus	1.9e-103	39.5
WP_002913974.1\|4088409_4088925_-	co-chaperone HscB	NA	NA	NA	NA
WP_002913979.1\|4088999_4089323_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	1.6e-21	47.7
WP_002913991.1\|4089340_4089727_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	2.7e-52	77.3
WP_002913992.1\|4089753_4090968_-	cysteine desulfurase	A0A1X7C038	Faustovirus	3.2e-35	32.8
WP_002913993.1\|4091146_4091638_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_002913994.1\|4091872_4092607_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_002913995.1\|4092727_4093531_+	inositol-1-monophosphatase	NA	NA	NA	NA
WP_002913996.1\|4093577_4094414_-	hypothetical protein	NA	NA	NA	NA
WP_002913997.1\|4094513_4095494_-	nickel/cobalt transporter	NA	NA	NA	NA
WP_004151988.1\|4095484_4096123_-	DUF1007 family protein	NA	NA	NA	NA
WP_002914002.1\|4096247_4097525_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_002914013.1\|4097521_4098658_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_002914015.1\|4098740_4099574_-	aldose 1-epimerase	NA	NA	NA	NA
WP_002914018.1\|4099573_4101010_-	sugar porter family MFS transporter	NA	NA	NA	NA
WP_002914020.1\|4101079_4104355_-	DUF5107 domain-containing protein	NA	NA	NA	NA
WP_002914022.1\|4104467_4105664_+	ROK family transcriptional regulator	NA	NA	NA	NA
WP_002914024.1\|4105737_4106160_+	DoxX family protein	NA	NA	NA	NA
WP_002914027.1\|4106215_4107469_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	1.9e-99	53.1
WP_002914028.1\|4107794_4108985_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_002914032.1\|4109058_4109397_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_004149357.1\|4109462_4110800_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	1.0e-10	35.0
WP_004188854.1\|4110786_4111494_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_072353999.1\|4111502_4112924_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.1e-13	25.8
WP_004185139.1\|4113514_4117402_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	5.0e-130	58.9
WP_002914046.1\|4117577_4119194_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_002914049.1\|4119190_4119733_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	2.6e-05	33.8
WP_002914050.1\|4119762_4120398_-	acid phosphatase AphA	NA	NA	NA	NA
WP_002914052.1\|4120611_4121460_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_094818676.1\|4121671_4122043_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.4e-26	51.9
WP_094818666.1\|4124253_4125564_-	hypothetical protein	A0A0K2FI18	Enterobacter_phage	7.2e-41	34.5
WP_094818665.1\|4125701_4126964_+	hypothetical protein	NA	NA	NA	NA
WP_094818664.1\|4127044_4127812_-	hypothetical protein	NA	NA	NA	NA
WP_094818663.1\|4129842_4132920_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	62.0
WP_064157515.1\|4132916_4133297_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.2e-60	83.3
WP_023302606.1\|4133309_4133786_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	5.3e-50	64.6
WP_004177132.1\|4133772_4134246_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.4e-55	62.1
WP_094818662.1\|4134266_4137848_-\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	1.3e-254	61.6
WP_019706055.1\|4137910_4138432_-	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	2.2e-09	45.2
WP_042936677.1\|4138506_4138812_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	3.6e-28	64.6
WP_029497345.1\|4138814_4139219_-\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	3.2e-32	56.9
WP_021313623.1\|4139249_4139954_-	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	2.5e-80	66.9
WP_094818661.1\|4140010_4140358_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.0e-30	61.9
WP_048997608.1\|4140354_4140804_-	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	2.3e-63	83.2
WP_032408655.1\|4140800_4141139_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.4e-41	74.1
WP_021313626.1\|4141147_4141468_-\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	4.8e-15	43.1
WP_077254151.1\|4141464_4141680_-	hypothetical protein	M1FN89	Enterobacteria_phage	1.9e-07	42.4
WP_094818660.1\|4141706_4142915_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	6.4e-193	84.2
WP_004884313.1\|4142929_4143583_-\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.1e-105	87.4
WP_094818659.1\|4143569_4144799_-\|portal	phage portal protein	U5P411	Shigella_phage	1.7e-201	81.5
WP_032418747.1\|4144993_4146724_-\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	9.2e-302	83.4
WP_004884285.1\|4146720_4147215_-\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
WP_021313631.1\|4147345_4147696_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.2e-51	80.9
WP_135769697.1\|4147760_4148135_-	hypothetical protein	NA	NA	NA	NA
WP_094818657.1\|4148207_4148453_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.2e-18	65.4
WP_094818655.1\|4148810_4149005_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.6e-21	89.1
WP_094818654.1\|4148955_4149231_-	hypothetical protein	NA	NA	NA	NA
WP_094818653.1\|4149233_4149863_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	6.5e-88	74.9
WP_000243811.1\|4149862_4150144_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.8e-19	48.4
WP_001294159.1\|4150130_4150517_-	membrane protein	A0A192Y8P2	Salmonella_phage	1.6e-57	90.6
WP_029497192.1\|4150726_4151131_-	antitermination protein	S5M7R9	Escherichia_phage	5.5e-32	54.0
WP_094067210.1\|4151120_4151765_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	3.4e-84	67.8
WP_020317326.1\|4151761_4152406_-	bacteriophage Lambda NinG protein	A0A1W6JNX3	Morganella_phage	1.9e-39	54.3
WP_094818652.1\|4152375_4153347_-	DNA primase	A0A286N2Q0	Klebsiella_phage	3.5e-109	61.1
WP_029497188.1\|4153343_4154873_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	6.6e-203	66.9
WP_094818651.1\|4154865_4155141_-	hypothetical protein	A0A1P8VVT6	Streptococcus_phage	8.7e-05	41.8
WP_094818650.1\|4155619_4156135_-	DNA-binding protein	A0A1C9II13	Salmonella_phage	8.8e-59	63.4
WP_004104275.1\|4156212_4156407_-	hypothetical protein	K7PLQ6	Enterobacteria_phage	3.6e-21	79.4
WP_094818649.1\|4156514_4157225_+	LexA family transcriptional regulator	K7P8B2	Enterobacteria_phage	4.0e-86	67.5
WP_094067207.1\|4158146_4158506_+	hypothetical protein	NA	NA	NA	NA
WP_080884803.1\|4158547_4159360_+	DUF2303 family protein	NA	NA	NA	NA
WP_094818648.1\|4159441_4160302_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.0e-72	55.1
WP_094818647.1\|4160616_4160841_+	hypothetical protein	S4TVX5	Salmonella_phage	6.4e-14	50.8
WP_094818646.1\|4160833_4161226_+	hypothetical protein	NA	NA	NA	NA
WP_094818645.1\|4161225_4161468_+	hypothetical protein	H6WYL1	Enterobacter_phage	2.4e-22	58.2
WP_094818644.1\|4161467_4161731_+	hypothetical protein	A0A2P0P958	Salmonella_phage	7.0e-28	69.0
WP_094818643.1\|4161742_4161997_+	hypothetical protein	NA	NA	NA	NA
WP_094818642.1\|4161997_4162819_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	3.7e-43	81.2
WP_087473103.1\|4162820_4163375_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	4.5e-69	66.7
WP_071839937.1\|4163394_4163595_+	DNA-binding protein	NA	NA	NA	NA
WP_087473069.1\|4163591_4164989_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_094818641.1\|4165203_4165464_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.8e-18	53.5

DBSCAN-SWA_15

4176870 : 4259380

Salmonella_phage(68.63%)

tail,integrase,transposase,portal,coat,head,plate,terminase,capsid,lysis,tRNA

attL 4187003:4187019|attR 4263812:4263828

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|4176870_4177608_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|4177739_4179071_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|4179116_4179500_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|4179813_4180503_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|4180560_4181646_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|4181849_4182275_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|4182344_4183043_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004188841.1\|4183077_4185729_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|4185849_4187205_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
4187003:4187019	attL	NA	NA	NA	NA
WP_002914095.1\|4187246_4187570_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|4187573_4188872_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|4194837_4197411_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|4197540_4198272_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|4198268_4199249_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|4199380_4200118_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|4200388_4200724_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|4200830_4200878_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|4200978_4202139_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|4202135_4203008_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|4203070_4204192_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|4204201_4205272_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|4205614_4206124_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|4206116_4207340_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|4207353_4207836_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|4207844_4209215_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|4209271_4209730_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|4209849_4210197_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|4210236_4211004_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|4211035_4211584_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|4211602_4211851_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|4212110_4213475_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|4213638_4214430_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|4214449_4215736_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|4215855_4216446_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|4216570_4217449_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|4217535_4219197_+	DNA repair protein RecN	NA	NA	NA	NA
WP_002914160.1\|4219344_4219686_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|4219752_4220043_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|4220032_4220509_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|4220619_4221102_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_004150980.1\|4221705_4222083_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|4222110_4222329_-	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|4222395_4223490_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|4223486_4223972_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150984.1\|4223968_4226599_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
WP_002896220.1\|4226591_4226711_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|4226725_4227025_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|4227077_4227593_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|4227602_4228775_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|4228923_4229997_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004200602.1\|4230048_4231167_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|4231176_4233126_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|4233127_4233799_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|4233791_4234700_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|4234686_4235049_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|4235045_4235618_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|4235712_4236579_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|4236601_4237048_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|4237040_4237463_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150998.1\|4237558_4237987_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|4237983_4238367_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|4238371_4238881_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|4238861_4239077_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|4239080_4239284_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|4239283_4239748_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004134644.1\|4239843_4240497_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151003.1\|4240500_4241553_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|4241569_4242403_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_019405037.1\|4242543_4244307_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151006.1\|4244306_4245350_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|4245406_4245676_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|4246197_4247199_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|4247198_4248278_+	hypothetical protein	NA	NA	NA	NA
WP_004151009.1\|4248264_4248948_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|4249043_4249277_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|4249288_4249477_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004152765.1\|4249584_4251069_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004151012.1\|4251549_4253934_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151013.1\|4253930_4254782_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|4254778_4255006_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|4255005_4255239_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|4255306_4255645_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|4255608_4255809_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|4255816_4256326_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|4256358_4256601_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|4256723_4257353_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_062955148.1\|4257355_4258354_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
WP_000019473.1\|4258399_4259380_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
4263812:4263828	attR	NA	NA	NA	NA

DBSCAN-SWA_16

4974495 : 5023338

uncultured_Caudovirales_phage(66.67%)

tail,protease,portal,head,terminase,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|4974495_4974990_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|4974993_4975632_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|4975601_4975886_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|4975943_4976336_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|4976351_4976780_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|4977045_4978173_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|4978363_4978762_+	DUF1043 family protein	NA	NA	NA	NA
WP_062954970.1\|4978935_4980303_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|4980390_4981449_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|4981585_4982524_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|4982938_4983409_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|4983784_4984048_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|4984146_4984413_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|4984463_4984739_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|4984818_4986786_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|4986791_4987724_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|4987731_4987935_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|4988066_4988996_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|4989031_4990477_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|4990565_4994363_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|4994400_4995870_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|4995872_4996454_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|4996461_4996950_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|4996949_4997942_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|4998012_4999056_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|4999361_5001302_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|5001381_5001573_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|5001801_5002803_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|5002802_5003411_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|5003634_5004087_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|5004109_5004577_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|5004587_5005937_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|5006047_5006290_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|5006279_5007731_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|5007742_5008624_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|5008981_5009947_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|5009971_5010268_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|5010421_5010613_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|5010615_5012277_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|5012260_5012617_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150959.1\|5012892_5013336_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|5013335_5013635_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|5013631_5013967_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|5013963_5015205_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|5015206_5015767_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|5015818_5016985_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|5017248_5017761_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|5017809_5018145_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|5018487_5020623_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|5020622_5020988_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|5020984_5021353_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004150967.1\|5021349_5021664_-	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|5021656_5021845_-	hypothetical protein	NA	NA	NA	NA
WP_106918304.1\|5021837_5022107_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_004150969.1\|5022558_5023338_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP025457

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31237 : 66880

Escherichia_phage(25.0%)

integrase,transposase,protease

attL 18330:18343|attR 45475:45488

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
18330:18343	attL	NA	NA	NA	NA
WP_000427619.1\|31237_32242_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_071785586.1\|32539_32782_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004118251.1\|33112_33406_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_004152282.1\|33504_34272_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_047670035.1\|34272_35229_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004118243.1\|35225_36224_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_023157913.1\|36220_37123_-	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_029498502.1\|37167_39492_-	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_004197067.1\|39584_40538_-	fec operon regulator FecR	NA	NA	NA	NA
WP_004197062.1\|40534_41056_-	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_004118231.1\|42158_42326_+\|integrase	integrase	NA	NA	NA	NA
WP_004118840.1\|42610_43738_+	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118229.1\|43734_44328_+	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004118228.1\|44324_45173_+	ABC transporter permease	NA	NA	NA	NA
WP_004118227.1\|45172_46093_+	ABC transporter permease	NA	NA	NA	NA
45475:45488	attR	NA	NA	NA	NA
WP_004152278.1\|46105_47710_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118225.1\|47754_48702_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004118832.1\|48709_50443_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_001067855.1\|51728_52433_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_101963439.1\|54417_55893_+	hypothetical protein	NA	NA	NA	NA
WP_016359304.1\|57023_57593_-	recombinase family protein	E5FFF9	Burkholderia_phage	9.8e-35	42.6
WP_000429838.1\|57803_58238_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294667.1\|58309_58660_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000735441.1\|58675_58951_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000654684.1\|58953_59199_+	mercury resistance system transport protein MerF	NA	NA	NA	NA
WP_000136268.1\|59195_60842_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-39	28.3
WP_003465059.1\|60858_61224_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_001087809.1\|61220_61457_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001067855.1\|61607_62312_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001572362.1\|62954_63977_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_004152113.1\|65917_66880_-\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

98908 : 106748

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000922630.1\|98908_100198_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-171	73.5
WP_001556710.1\|100246_101998_-	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_020324593.1\|102015_102378_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_001114073.1\|102425_102779_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	4.1e-23	50.0
WP_077253206.1\|103331_103688_+	recombination enhancement function domain protein	Q71TG3	Escherichia_phage	4.2e-36	65.2
WP_000611681.1\|104249_104771_+	hypothetical protein	A0A222YZ79	Escherichia_phage	6.4e-49	53.8
WP_004118613.1\|104767_105097_+	hypothetical protein	A0A222YYR0	Escherichia_phage	6.7e-36	65.1
WP_003031541.1\|105089_106292_+	hypothetical protein	A0A222YXT1	Escherichia_phage	3.9e-126	63.6
WP_000990392.1\|106328_106748_-	helix-turn-helix domain-containing protein	A0A222YXG1	Escherichia_phage	1.8e-06	31.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP025458

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP025456

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP025457

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection