CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP025463	Klebsiella pneumoniae strain F44 plasmid p44-2, complete sequence	0 crisprs	RT	0	3
NZ_CP025461	Klebsiella pneumoniae strain F44 chromosome, complete genome	3 crisprs	cas3,DEDDh,WYL,DinG,RT,csa3	0	13
NZ_CP025465	Klebsiella pneumoniae strain F44 plasmid p44-4, complete sequence	0 crisprs	NA	0	0
NZ_CP025462	Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence	1 crisprs	RT,DinG,c2c9_V-U4	1	15
NZ_CP025464	Klebsiella pneumoniae strain F44 plasmid p44-3, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10889 : 63707

Escherichia_phage(27.27%)

transposase,integrase

attL 19486:19501|attR 53839:53854

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013609528.1\|10889_11963_+\|transposase	IS481-like element ISKpn28 family transposase	NA	NA	NA	NA
WP_014343510.1\|12146_12521_-	hypothetical protein	NA	NA	NA	NA
WP_013023807.1\|12576_12903_-	hypothetical protein	NA	NA	NA	NA
WP_001568058.1\|12899_13628_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001568057.1\|13624_14056_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_015493064.1\|14100_16158_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.2e-21	25.4
WP_001568055.1\|16227_16476_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_014343512.1\|16524_17067_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	4.6e-50	76.7
WP_014343514.1\|17899_18463_-	methyltransferase	A0A2I7RHK4	Vibrio_phage	7.4e-19	34.3
WP_014343515.1\|18510_19866_-	DUF3560 domain-containing protein	NA	NA	NA	NA
19486:19501	attL	NA	NA	NA	NA
WP_001568051.1\|19917_20148_-	hypothetical protein	NA	NA	NA	NA
WP_001568050.1\|20239_20467_-	hypothetical protein	NA	NA	NA	NA
WP_001568049.1\|21146_21467_-	hypothetical protein	NA	NA	NA	NA
WP_011977779.1\|21501_21756_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.0e-12	48.8
WP_001568047.1\|21943_22135_-	hypothetical protein	NA	NA	NA	NA
WP_013214014.1\|22177_22684_-	antirestriction protein	G9FHQ1	Rhodococcus_virus	1.2e-07	31.4
WP_013023797.1\|22726_23392_-	DUF1472 domain-containing protein	NA	NA	NA	NA
WP_013214013.1\|23835_24603_-	hypothetical protein	NA	NA	NA	NA
WP_001568043.1\|24656_25076_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001568042.1\|25085_25307_-	hypothetical protein	NA	NA	NA	NA
WP_001568041.1\|25306_26008_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
WP_001568040.1\|26444_26675_-	hypothetical protein	NA	NA	NA	NA
WP_013214012.1\|26737_27409_-	mediator of plasmid stability	NA	NA	NA	NA
WP_004152353.1\|27411_28383_-	mediator of plasmid stability	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_004152765.1\|28631_30116_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_001568036.1\|30525_30957_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
WP_013214011.1\|30956_32228_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	7.5e-152	63.7
WP_086523286.1\|32309_33287_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
WP_011977818.1\|33283_34489_-	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
WP_004118283.1\|35598_36465_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_013214010.1\|37242_37500_+	hypothetical protein	NA	NA	NA	NA
WP_013214009.1\|37545_38325_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
WP_011977814.1\|38508_39513_-	hypothetical protein	NA	NA	NA	NA
WP_011977813.1\|39542_39746_-	hypothetical protein	NA	NA	NA	NA
WP_013214008.1\|39791_40313_-	hypothetical protein	NA	NA	NA	NA
WP_032738650.1\|40370_40721_-	hypothetical protein	NA	NA	NA	NA
WP_011977810.1\|40799_41744_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|42322_42553_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|42549_42966_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004206609.1\|43039_44602_+	AAA family ATPase	NA	NA	NA	NA
WP_000361404.1\|44586_45609_+	helicase UvrD	NA	NA	NA	NA
WP_000427619.1\|47142_48147_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000429836.1\|48225_48660_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|48731_49082_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|49095_49371_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|49406_49829_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|49880_51575_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|51592_51955_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|51951_52188_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|52184_52892_+	EAL domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|54203_54908_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
53839:53854	attR	NA	NA	NA	NA
WP_014343468.1\|54947_55421_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
WP_013213985.1\|55543_56524_+\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
WP_004199234.1\|56799_57681_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_013213989.1\|59540_59966_-	antirestriction protein	A0A2D0W8Z5	Bordetella_virus	5.3e-17	37.3
WP_013213990.1\|60076_60355_-	hypothetical protein	NA	NA	NA	NA
WP_001161490.1\|61897_62458_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001067855.1\|63002_63707_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

70943 : 122706

Escherichia_phage(42.86%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|70943_71648_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|72061_72766_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_015059014.1\|73176_73698_-	hypothetical protein	NA	NA	NA	NA
WP_000412447.1\|73760_74069_-	hypothetical protein	NA	NA	NA	NA
WP_000830838.1\|74095_75088_-	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA
WP_001203735.1\|75084_75717_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA
WP_015059013.1\|75713_76100_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA
WP_015059012.1\|76096_78724_-	type IV secretion system protein TraC	NA	NA	NA	NA
WP_001278692.1\|78883_79105_-	conjugal transfer protein TraR	A2I309	Vibrio_virus	4.4e-07	39.4
WP_062955122.1\|79239_79755_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA
WP_001038341.1\|79751_80003_-	conjugal transfer protein TrbG	NA	NA	NA	NA
WP_001352845.1\|80014_80245_-	conjugal transfer protein TrbD	NA	NA	NA	NA
WP_000002778.1\|80198_80789_-	conjugal transfer protein TraP	NA	NA	NA	NA
WP_032297072.1\|80778_82206_-	conjugal transfer protein TraB	NA	NA	NA	NA
WP_072095570.1\|82205_82910_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_000399794.1\|82920_83487_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_000012106.1\|83508_83820_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_021519752.1\|83834_84200_-	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
WP_001254386.1\|84233_84461_-	conjugal transfer relaxosome protein TraY	NA	NA	NA	NA
WP_015059009.1\|84554_85241_-	PAS domain-containing protein	NA	NA	NA	NA
WP_000124981.1\|85431_85815_-	relaxosome protein TraM	NA	NA	NA	NA
WP_015059008.1\|86091_86739_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_001234445.1\|87035_87857_-	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	3.4e-44	38.2
WP_001272251.1\|87967_88264_-	hypothetical protein	NA	NA	NA	NA
WP_001312861.1\|89178_89337_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_001276217.1\|89616_90336_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_000845953.1\|90332_90767_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_000006003.1\|92919_93153_-	DUF905 family protein	NA	NA	NA	NA
WP_000290834.1\|93210_93738_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	6.0e-47	74.4
WP_015059007.1\|94580_95144_-	class I SAM-dependent methyltransferase	A8HNV9	Thalassomonas_phage	6.1e-21	37.3
WP_000170695.1\|95190_96552_-	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_000218642.1\|96603_96834_-	hypothetical protein	NA	NA	NA	NA
WP_012372796.1\|98233_99901_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-164	53.3
WP_001027493.1\|100214_100406_-	hypothetical protein	NA	NA	NA	NA
WP_000271762.1\|100402_100825_-	DUF1380 family protein	NA	NA	NA	NA
WP_001198928.1\|100871_101297_-	antirestriction protein	NA	NA	NA	NA
WP_011161242.1\|101269_101842_-	YubH family protein	NA	NA	NA	NA
WP_000274503.1\|102541_102976_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001104881.1\|102989_103211_-	hypothetical protein	NA	NA	NA	NA
WP_000085883.1\|103211_103895_-	DNA methylase	A0A2I7RE86	Vibrio_phage	5.6e-29	37.4
WP_032146011.1\|103971_104265_-	hypothetical protein	NA	NA	NA	NA
WP_000959884.1\|104411_105374_+	plasmid segregation protein ParM	A0A222YXF2	Escherichia_phage	4.1e-94	53.9
WP_000361389.1\|105376_105727_+	protein stbB	NA	NA	NA	NA
WP_001333089.1\|105849_106131_-	hypothetical protein	NA	NA	NA	NA
WP_071557810.1\|107941_108082_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|108072_108777_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_012372818.1\|109226_109982_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_064441864.1\|111195_111732_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
WP_000957857.1\|111823_112012_+	hypothetical protein	NA	NA	NA	NA
WP_012579081.1\|116964_117888_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
WP_013188475.1\|117967_118843_-	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
WP_001067855.1\|119353_120058_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001398199.1\|121368_121770_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_000557619.1\|121702_121960_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_000616807.1\|122052_122706_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_3

140638 : 154444

Enterobacteria_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019445.1\|140638_141619_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_015493087.1\|142132_142528_+	hypothetical protein	NA	NA	NA	NA
WP_015493086.1\|142524_143136_+	DUF2913 family protein	NA	NA	NA	NA
WP_015493085.1\|143132_144083_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
WP_040219232.1\|144229_144430_-	hypothetical protein	NA	NA	NA	NA
WP_022652286.1\|144483_145116_-	recombinase family protein	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
WP_015493083.1\|145478_146684_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
WP_016479949.1\|146680_147652_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
WP_015493081.1\|147787_149059_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	6.1e-154	63.0
WP_015493080.1\|149058_149481_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
WP_015493079.1\|149660_150332_-	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
WP_002211749.1\|150690_151368_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
WP_015493077.1\|151367_151589_+	hypothetical protein	NA	NA	NA	NA
WP_015493076.1\|151599_152019_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_015493075.1\|152072_152852_+	hypothetical protein	NA	NA	NA	NA
WP_015493074.1\|153256_153763_+	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
WP_015493073.1\|153805_153997_+	hypothetical protein	NA	NA	NA	NA
WP_032072906.1\|154183_154444_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP025461

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025461_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025461_1

846438-846523

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025461_1

>merge|NZ_CP025461|1|846438-846523|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP025461|1|1|846438-846523|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025461.1\|WP_020321480.1\|835408_835888_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP025461.1\|WP_002888348.1\|848778_849438_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP025461.1\|WP_002888373.1\|860444_861212_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP025461.1\|WP_002888332.1\|843122_843950_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP025461.1\|WP_002888370.1\|859470_860316_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP025461.1\|WP_002888329.1\|839189_840476_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP025461.1\|WP_002888353.1\|855077_855773_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP025461.1\|WP_002888357.1\|855910_857413_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP025461.1\|WP_002888321.1\|836143_836992_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP025461.1\|WP_002888340.1\|844670_846296_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP025461.1\|WP_002888327.1\|838194_839184_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP025461.1\|WP_002888337.1\|843982_844681_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP025461.1\|WP_002888349.1\|852544_854902_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP025461.1\|WP_004151368.1\|849450_852357_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP025461.1\|WP_004147026.1\|840530_842879_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP025461.1\|WP_002888347.1\|848164_848704_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP025461.1\|WP_002888324.1\|837376_838198_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP025461.1\|WP_002888368.1\|857423_859133_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP025461.1\|WP_002888323.1\|836996_837374_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP025461.1\|WP_002888345.1\|846620_847985_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030

Protein	Function_ID	Function_description	E-value
NZ_CP025461.1\|WP_020321480.1\|835408_835888_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	5.491e-127
NZ_CP025461.1\|WP_002888348.1\|848778_849438_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP025461.1\|WP_002888373.1\|860444_861212_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP025461.1\|WP_002888332.1\|843122_843950_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP025461.1\|WP_002888370.1\|859470_860316_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP025461.1\|WP_002888329.1\|839189_840476_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP025461.1\|WP_002888353.1\|855077_855773_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP025461.1\|WP_002888357.1\|855910_857413_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP025461.1\|WP_002888321.1\|836143_836992_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP025461.1\|WP_002888340.1\|844670_846296_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP025461.1\|WP_002888327.1\|838194_839184_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP025461.1\|WP_002888337.1\|843982_844681_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP025461.1\|WP_002888349.1\|852544_854902_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP025461.1\|WP_004151368.1\|849450_852357_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP025461.1\|WP_004147026.1\|840530_842879_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP025461.1\|WP_002888347.1\|848164_848704_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP025461.1\|WP_002888324.1\|837376_838198_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP025461.1\|WP_002888368.1\|857423_859133_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP025461.1\|WP_002888323.1\|836996_837374_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP025461.1\|WP_002888345.1\|846620_847985_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169

>NZ_CP025461.1|WP_002888340.1|844670_846296_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP025461.1|WP_002888337.1|843982_844681_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP025461.1|WP_002888332.1|843122_843950_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP025461.1|WP_004147026.1|840530_842879_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP025461.1|WP_002888329.1|839189_840476_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP025461.1|WP_002888327.1|838194_839184_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP025461.1|WP_002888324.1|837376_838198_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP025461.1|WP_002888323.1|836996_837374_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP025461.1|WP_002888321.1|836143_836992_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP025461.1|WP_020321480.1|835408_835888_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVLGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP025461.1|WP_002888345.1|846620_847985_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP025461.1|WP_002888347.1|848164_848704_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP025461.1|WP_002888348.1|848778_849438_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP025461.1|WP_004151368.1|849450_852357_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP025461.1|WP_002888349.1|852544_854902_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP025461.1|WP_002888353.1|855077_855773_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP025461.1|WP_002888357.1|855910_857413_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP025461.1|WP_002888368.1|857423_859133_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP025461.1|WP_002888370.1|859470_860316_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP025461.1|WP_002888373.1|860444_861212_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP025461_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025461_2

1667911-1667988

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025461_2

>merge|NZ_CP025461|2|1667911-1667988|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP025461|2|2|1667911-1667988|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025461.1\|WP_002895655.1\|1675213_1677235_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP025461.1\|WP_002895648.1\|1673116_1673839_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP025461.1\|WP_002895575.1\|1668140_1668617_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP025461.1\|WP_004147672.1\|1665979_1667362_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP025461.1\|WP_002895284.1\|1656410_1657334_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP025461.1\|WP_004151700.1\|1671227_1672385_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP025461.1\|WP_004151698.1\|1660783_1661740_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP025461.1\|WP_002895652.1\|1674589_1674802_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025461.1\|WP_002895580.1\|1670190_1671231_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP025461.1\|WP_002895280.1\|1654939_1655152_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|313818
NZ_CP025461.1\|WP_004151701.1\|1677412_1677505_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025461.1\|WP_002895578.1\|1668687_1669977_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP025461.1\|WP_004151697.1\|1659569_1660787_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP025461.1\|WP_004152853.1\|1673780_1674503_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP025461.1\|WP_004151696.1\|1658029_1659313_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP025461.1\|WP_002895358.1\|1661801_1662527_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP025461.1\|WP_004151699.1\|1662669_1664358_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP025461.1\|WP_004142100.1\|1672368_1673124_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP025461.1\|WP_002895420.1\|1664354_1665881_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP025461.1\|WP_002895283.1\|1655887_1656394_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP025461.1\|WP_002895648.1\|1673116_1673839_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP025461.1\|WP_002895575.1\|1668140_1668617_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP025461.1\|WP_004147672.1\|1665979_1667362_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP025461.1\|WP_002895284.1\|1656410_1657334_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
NZ_CP025461.1\|WP_004151700.1\|1671227_1672385_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP025461.1\|WP_004151698.1\|1660783_1661740_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP025461.1\|WP_002895655.1\|1675213_1677235_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP025461.1\|WP_002895580.1\|1670190_1671231_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP025461.1\|WP_002895280.1\|1654939_1655152_-\|hypothetical-protein	gnl\|CDD\|313818	pfam10684, BDM, Putative biofilm-dependent modulation protein. This is a family of tightly conserved proteins from Enterobacteriaceae which are annotated as being biofilm-dependent modulation protein homologs.	0.00154989
NZ_CP025461.1\|WP_002895578.1\|1668687_1669977_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP025461.1\|WP_004151697.1\|1659569_1660787_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP025461.1\|WP_004152853.1\|1673780_1674503_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP025461.1\|WP_004151696.1\|1658029_1659313_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP025461.1\|WP_002895358.1\|1661801_1662527_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP025461.1\|WP_004151699.1\|1662669_1664358_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP025461.1\|WP_004142100.1\|1672368_1673124_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP025461.1\|WP_002895420.1\|1664354_1665881_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0

>NZ_CP025461.1|WP_004147672.1|1665979_1667362_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP025461.1|WP_002895420.1|1664354_1665881_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP025461.1|WP_004151699.1|1662669_1664358_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP025461.1|WP_002895358.1|1661801_1662527_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP025461.1|WP_004151698.1|1660783_1661740_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP025461.1|WP_004151697.1|1659569_1660787_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP025461.1|WP_004151696.1|1658029_1659313_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP025461.1|WP_002895284.1|1656410_1657334_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP025461.1|WP_002895283.1|1655887_1656394_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP025461.1|WP_002895280.1|1654939_1655152_-|hypothetical-protein
MHIKNTIPAEFVFNSALMKNIENTLIKQHRTVNNERMITEIQHRLQTESNEILSDLYLQALDMLYSKPHH
>NZ_CP025461.1|WP_002895575.1|1668140_1668617_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP025461.1|WP_002895578.1|1668687_1669977_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP025461.1|WP_002895580.1|1670190_1671231_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP025461.1|WP_004151700.1|1671227_1672385_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP025461.1|WP_004142100.1|1672368_1673124_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP025461.1|WP_002895648.1|1673116_1673839_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP025461.1|WP_004152853.1|1673780_1674503_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP025461.1|WP_002895652.1|1674589_1674802_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP025461.1|WP_002895655.1|1675213_1677235_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP025461.1|WP_004151701.1|1677412_1677505_+|hypothetical-protein
MQKINFREYLAVATALVIIVAFFHQWVLTF

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Crispr_ID: NZ_CP025461_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025461_3

4768563-4768661

Orphan

Consensus_repeat	Method
CAGATAGGCCGCGCGCAGCAGCGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025461_3

>merge|NZ_CP025461|3|4768563-4768661|CRISPRCasFinder
CAGATAGGCCGCGCGCAGCAGCGCGCGCGTTGCAGTTCATCCAGCAGATGCATCGTTGATACTTTGCAGCATCAGATAGGCCGCGCGCAGCAGCGTCGC

>NZ_CP025461|3|3|4768563-4768661|CRISPRCasFinder
CAGATAGGCCGCGCGCAGCAGCGCGCG	CGTTGCAGTTCATCCAGCAGATGCATCGTTGATACTTTGCAGCAT
CAGATAGGCCGCGCGCAGCAGCGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025461.1\|WP_002916858.1\|4765357_4766791_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	unknown	unknown	gnl\|CDD\|183085
NZ_CP025461.1\|WP_002916849.1\|4759910_4760582_+\|DUF1190-family-protein	unknown	unknown	gnl\|CDD\|236948
NZ_CP025461.1\|WP_002916856.1\|4764633_4764906_+\|accessory-factor-UbiK-family-protein	unknown	unknown	gnl\|CDD\|225508
NZ_CP025461.1\|WP_004144532.1\|4773227_4774049_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP025461.1\|WP_002916871.1\|4776587_4776890_+\|urease-subunit-gamma	unknown	unknown	gnl\|CDD\|183913
NZ_CP025461.1\|WP_002916864.1\|4771974_4773216_+\|multifunctional-CCA-addition/repair-protein	unknown	unknown	gnl\|CDD\|182810
NZ_CP025461.1\|WP_002916851.1\|4761792_4762584_-\|4,5-DOPA-dioxygenase-extradiol	unknown	unknown	gnl\|CDD\|182598
NZ_CP025461.1\|WP_004150921.1\|4758273_4759743_+\|outer-membrane-channel-protein-TolC	unknown	unknown	gnl\|CDD\|236529
NZ_CP025461.1\|WP_002916869.1\|4775753_4776578_+\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|223899
NZ_CP025461.1\|WP_002916852.1\|4762770_4763541_+\|zinc-transporter-ZupT	unknown	unknown	gnl\|CDD\|235253
NZ_CP025461.1\|WP_002916848.1\|4757444_4758077_-\|ADP-ribose-diphosphatase	unknown	unknown	gnl\|CDD\|182682
NZ_CP025461.1\|WP_002916872.1\|4776899_4777220_+\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|237303
NZ_CP025461.1\|WP_004150923.1\|4774247_4774631_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	unknown	unknown	gnl\|CDD\|183219
NZ_CP025461.1\|WP_002916857.1\|4764941_4765139_-\|cell-surface-composition-regulator-GlgS	unknown	unknown	gnl\|CDD\|179501
NZ_CP025461.1\|WP_002916855.1\|4763602_4764256_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|235119
NZ_CP025461.1\|WP_002916866.1\|4774738_4775356_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NZ_CP025461.1\|WP_004150922.1\|4769779_4771078_-\|inorganic-triphosphatase	unknown	unknown	gnl\|CDD\|225569
NZ_CP025461.1\|WP_002916862.1\|4771292_4771913_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|182809
NZ_CP025461.1\|WP_004144529.1\|4775617_4775764_-\|short-chain-dehydrogenase	unknown	unknown	unknown
NZ_CP025461.1\|WP_002916850.1\|4760587_4761748_+\|glutathionylspermidine-synthase-family-protein	unknown	unknown	gnl\|CDD\|367631

Protein	Function_ID	Function_description	E-value
NZ_CP025461.1\|WP_002916858.1\|4765357_4766791_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
NZ_CP025461.1\|WP_002916849.1\|4759910_4760582_+\|DUF1190-family-protein	gnl\|CDD\|236948	PRK11653, PRK11653, DUF1190 family protein.	2.80057e-136
NZ_CP025461.1\|WP_002916856.1\|4764633_4764906_+\|accessory-factor-UbiK-family-protein	gnl\|CDD\|225508	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown].	7.82862e-29
NZ_CP025461.1\|WP_004144532.1\|4773227_4774049_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	6.69945e-119
NZ_CP025461.1\|WP_002916871.1\|4776587_4776890_+\|urease-subunit-gamma	gnl\|CDD\|183913	PRK13241, ureA, urease subunit gamma; Provisional.	5.35751e-71
NZ_CP025461.1\|WP_002916864.1\|4771974_4773216_+\|multifunctional-CCA-addition/repair-protein	gnl\|CDD\|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	0
NZ_CP025461.1\|WP_002916851.1\|4761792_4762584_-\|4,5-DOPA-dioxygenase-extradiol	gnl\|CDD\|182598	PRK10628, PRK10628, LigB family dioxygenase; Provisional.	0
NZ_CP025461.1\|WP_004150921.1\|4758273_4759743_+\|outer-membrane-channel-protein-TolC	gnl\|CDD\|236529	PRK09465, tolC, outer membrane channel protein; Reviewed.	0
NZ_CP025461.1\|WP_002916869.1\|4775753_4776578_+\|urease-accessory-protein-UreD	gnl\|CDD\|223899	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones].	2.39371e-77
NZ_CP025461.1\|WP_002916852.1\|4762770_4763541_+\|zinc-transporter-ZupT	gnl\|CDD\|235253	PRK04201, PRK04201, zinc transporter ZupT; Provisional.	2.94651e-122
NZ_CP025461.1\|WP_002916848.1\|4757444_4758077_-\|ADP-ribose-diphosphatase	gnl\|CDD\|182682	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional.	2.71834e-152
NZ_CP025461.1\|WP_002916872.1\|4776899_4777220_+\|urease-subunit-beta	gnl\|CDD\|237303	PRK13203, ureB, urease subunit beta; Reviewed.	7.1889e-70
NZ_CP025461.1\|WP_004150923.1\|4774247_4774631_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	gnl\|CDD\|183219	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase.	9.31582e-81
NZ_CP025461.1\|WP_002916857.1\|4764941_4765139_-\|cell-surface-composition-regulator-GlgS	gnl\|CDD\|179501	PRK02922, PRK02922, cell surface composition regulator GlgS.	7.01728e-33
NZ_CP025461.1\|WP_002916855.1\|4763602_4764256_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|235119	PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional.	6.58837e-160
NZ_CP025461.1\|WP_002916866.1\|4774738_4775356_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	2.25184e-101
NZ_CP025461.1\|WP_004150922.1\|4769779_4771078_-\|inorganic-triphosphatase	gnl\|CDD\|225569	COG3025, COG3025, Uncharacterized conserved protein [Function unknown].	5.81711e-145
NZ_CP025461.1\|WP_002916862.1\|4771292_4771913_+\|SH3-domain-containing-protein	gnl\|CDD\|182809	PRK10884, PRK10884, SH3 domain-containing protein; Provisional.	4.92618e-150
NZ_CP025461.1\|WP_002916850.1\|4760587_4761748_+\|glutathionylspermidine-synthase-family-protein	gnl\|CDD\|367631	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp. This region contains the Glutathionylspermidine synthase enzymatic activity EC:6.3.1.8. This is the C-terminal region in bi-enzymes. Glutathionylspermidine (GSP) synthetases of Trypanosomatidae and Escherichia coli couple hydrolysis of ATP (to ADP and Pi) with formation of an amide bond between spermidine and the glycine carboxylate of glutathione (gamma-Glu-Cys-Gly). In the pathogenic trypanosomatids, this reaction is the penultimate step in the biosynthesis of the antioxidant metabolite, trypanothione (N1,N8-bis-(glutathionyl)spermidine), and is a target for drug design. This region, the pre-ATP grasp region, probably carries the substrate-binding site.	0

>NZ_CP025461.1|WP_002916858.1|4765357_4766791_-|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE
MKVTLPEFERAGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVENIEERPGGAANVAMNIASLGATSRLVGLTGIDDAARALSQALANVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFSGVDPQPMHERIQQALGSIGALVLSDYAKGALTSVQTMIRLAREAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCQDEAQIVERGMKLIAEFELSALLVTRSEQGMTLLQPGRPPLHMPTQAQEVYDVTGAGDTVIGVLAATLASGNTLEEACYFANAAAGVVVGKLGTSTVSPVELENAVRGRAETGFGVMSEEELKQAVAAARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGETRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEQIAGSEEVWANGGEVLVLNFEDGCSTTNIIKKIQKDSDK
>NZ_CP025461.1|WP_002916857.1|4764941_4765139_-|cell-surface-composition-regulator-GlgS
MNHNDMYSMKNFDFLARSFARMHAQGQPVDLQAIVGNMDEEHREWFCQRYELYCRQVSSQAEAAH
>NZ_CP025461.1|WP_002916856.1|4764633_4764906_+|accessory-factor-UbiK-family-protein
MIDPKKIEQIARQVHESMPKGLRDLGEDVEKKIRQALQSQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRLNDLENRPAATPGSEEQQ
>NZ_CP025461.1|WP_002916855.1|4763602_4764256_-|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MNQTLLSSFGTAFERVEHALNALREGRGVMVLDDEDRENEGDMIFAAETMTVEQMALTIRHGSGIVCLCLTEERRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIADGAKPSDLNRPGHVFPLRAQPGGVLTRGGHTEATIDLVTLAGFKPAGVLCELTNDDGTMARAPECIKFAQQHNMAVVTIEDLVAYRREHERKAS
>NZ_CP025461.1|WP_002916852.1|4762770_4763541_+|zinc-transporter-ZupT
MSSPLILTLLAGSATFIGAIFGVIGQKPSNRLLGFSLGFAAGIMLLISLMEMLPAALAAEGMSPLLGYGMFVVGLLGYFGLDRLLPHAHPQDLMTPAMPRPRNLRRTAILLTLGISLHNFPEGIATYVTASNNLELGMGVALAVALHNIPEGLAVAGPVYAATGSRSKAVLWAGLSGMAEILGGVLAWLILGSLVSPLVMGAIMAAVAGIMVALSVDELMPLAKEIDPQSNPSYGVLCGMSVMGLSLVVLQTMGIG
>NZ_CP025461.1|WP_002916851.1|4761792_4762584_-|4,5-DOPA-dioxygenase-extradiol
MSRTRMPALFLGHGSPMNVLEDNRYTRAWAQLGETLPRPKAIVVVSAHWFTRGTGVTAMETPKTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLSPVPVTLDTEAWGFDHGSWGVLIKMYPQADIPMVQLSIDSTKPPAWHLEMGRKLASLRDEGIMLVASGNVVHNLRTARWHGENTPYPWAESFNNYVKANLQWQGLDEQHPLVNYLAHEGGSLSNPTAEHFLPLLYVLGTWDGVEAMTIPVDGIEMGSLSMLSVLVGA
>NZ_CP025461.1|WP_002916850.1|4760587_4761748_+|glutathionylspermidine-synthase-family-protein
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCLQVVEKVIASDELMTKFRIPKHTWGFVRQSWKTNQPSLYSRLDLAWDGIGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLIDRFGELREQFGFQLLHMACCRDTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDAHPEMEKYVIKPIFSREGANVSIVENGKVVEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE
>NZ_CP025461.1|WP_002916849.1|4759910_4760582_+|DUF1190-family-protein
MKRTKNINHSSFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGKAAECTTAYTNAVKEAERTAPKYATREDCVAEFGEGQCQQTPAQAGVAPENQAQAQSSGSFWMPLMAGYMMGRLMGGGMAQQQPLFSSKNPASPAYGQYTDASGKSYGAAQPGRTMNVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGSTSSSRSMGG
>NZ_CP025461.1|WP_004150921.1|4758273_4759743_+|outer-membrane-channel-protein-TolC
MKKLLPILIGLSLTGFSAMSQAENLLQVYQQARISNPDLRKSAADRDAAFEKINEARSPLLPQLGLGADYTYTNGYRDSNGVNSNVTSGSLQLTQVLFDMSKWRALTLQEKTAGIQDVTYQTDQQTLILNTATAYFKVLAAIDTLSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNARSQYDAVLANEVTARNDLDNAVEGLRQVTGNYYPELASLNVNGFKTNKPQAVNALLKEAENRNLSLLQARLSQDLAREQIRQAQDGHLPTLNLSASTGVSNTRYNGSKTNTPLAYNDSDNGQNQIGLNFSLPLYQGGAVTSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNVNASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSNARYNYLINELNIKSALGTLNEQDLVALNNTLGKPISTSADSVAPENPQQDATADGYGNTTAAVKPASARTTQSSGSNPFRQ
>NZ_CP025461.1|WP_002916848.1|4757444_4758077_-|ADP-ribose-diphosphatase
MSKPTQQGITFSKNDVEIIARETLYRGFFSLDLYRFRHRLFNGGMSGEITREIFERGHAAVLLPFDPVRDEVVLVEQIRIAAYDTSESPWLLEMVAGMIEAGETVEDVARREALEEAGLEVGRTKPILSYLASPGGTSERLSILVGEVDASTAKGIHGLAEENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHYHNLRNEWTK
>NZ_CP025461.1|WP_004150922.1|4769779_4771078_-|inorganic-triphosphatase
MAQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGDQGRYEMTLKIAGRVVGGLHQRPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLFSTDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELELELLAGETADLLRLAHRLLESGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHDEIWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEALFRTEVVGAKLALTEWLVQRGWRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHLAVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQELQRAIEHDDRSVFEYFRRQALAAEPFWLHSGKR
>NZ_CP025461.1|WP_002916862.1|4771292_4771913_+|SH3-domain-containing-protein
MPKLRLITFTLLALSAATAVHAEEKRYVSDELNTWVRSGPGDNYRLVGTINAGEEVSVLQTNDSTSYAQIRDSNGRTAWIPLKELSNEPSLRTRVPDLENQVKTLTDKLNNIDATWNQRTADMQKKVAGSDSVINALKDENQKLKNELVVAQKKVNAANLQLDDKQRTIIMQWFMYGGGVLGVGLLLGLVLPHLVPSRKRKDRWMN
>NZ_CP025461.1|WP_002916864.1|4771974_4773216_+|multifunctional-CCA-addition/repair-protein
MKSYLVGGAVRDALLGLPVKDRDWVVVGATPQQMLDAGYQQVGRDFPVFLHPQSREEYALARTERKSGAGYTGFTCYAAPDVTLEADLLRRDLTVNALAQDADGAIIDPYGGQNDLRQRLLRHVSPAFSEDPLRVLRVARFAARYAHLGFRIAEETQALMAAMVEAGELAHLTPERVWKETESALTTRNPQVFFQTLRDCQALKVLFPEIDALYGVPAPAKWHPEIDTGLHTLMTVTMAAMLSPDVDVRFATLCHDLGKGLTPKALWPRHHGHGPAGVKLVEQLCARLRVPNDIRDLAKLVAEYHDLIHTLPILQPKTLVKLFDSIDAWRKPQRVQQIALTSEADVRGRTGFEASDYPQGRLLLEAWEVAQSVSTKEVVAAGFKGAEIREELTRRRIAAVAQWKEQRCPQPQG
>NZ_CP025461.1|WP_004144532.1|4773227_4774049_-|undecaprenyl-diphosphate-phosphatase
MSDIHSLLVAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTANTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGKPPAHEGQGSGRLSLIHILLGMIPAVVMGLIFHDTIKSLFNPVNVMYALIVGGVLLIAAEVLKPKQPRAVGIDDMTYRQAFVIGCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATVLDVYKSIGFLNMGDVPMFAVGFVMAFIVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF
>NZ_CP025461.1|WP_004150923.1|4774247_4774631_-|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase
MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEIAWDNRKAAASDDVSDCLSYADISERVIAHVEGGKFALVERVAEEVADLLLETFQSPWVRIKVSKPGAVARAANVGVIIERGLNLKQNFSGHTC
>NZ_CP025461.1|WP_002916866.1|4774738_4775356_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MSAIAPGLVLLAYLCGSISSAILVCRLAGLPDPRDSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAWALGLTSFWLGLVAIAACVGHIWPVFFHFRGGKGVATAFGAIAPIGLDLTGVMAGTWLLTILLSGYSSLGAIVSALIAPFYVWWFKPQYTFPVSMLSCLILLRHHDNIQRLWRRQESKIWTRVKKKKTPEQK
>NZ_CP025461.1|WP_004144529.1|4775617_4775764_-|short-chain-dehydrogenase
MPCNVAPLQNQDKTAAMSIDRREFIPVIRNAYVIRNPERRDGREGKAA
>NZ_CP025461.1|WP_002916869.1|4775753_4776578_+|urease-accessory-protein-UreD
MHGTVLPPLKKGWQATLDLRFHQAGGKTVLASAQHVGPLTVQRPFYPEEETCHLYLLHPPGGIVGGDELTISAHLAPGCHTLITMPGASKFYRSSGAQALVRQQLTLAPQATLEWLPQDAIFFPGANARLFTTFHLCASSRLLAWDLLCLGRPVIGETFSHGTLSNRLEVWVDDEPLLVERLQLQEGELSSVAERPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLSDDNLICQRVMRDVWQFLRPHLTGKSPVLPRIWLT
>NZ_CP025461.1|WP_002916871.1|4776587_4776890_+|urease-subunit-gamma
MELTPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARDGKSVASLMEEGRHVLTREQVMEGVPEMIPDIQVEATFPDGSKLVTVHNPII
>NZ_CP025461.1|WP_002916872.1|4776899_4777220_+|urease-subunit-beta
MIPGEYHVKPGQIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVAFAGHRAVFGFRGEVMGPLEVNDE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1098195 : 1109847

Enterobacteria_phage(66.67%)

integrase

attL 1086329:1086343|attR 1109384:1109398

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1086329:1086343	attL	NA	NA	NA	NA
WP_002889890.1\|1098195_1100529_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|1100540_1100861_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889911.1\|1100857_1101085_-	hypothetical protein	NA	NA	NA	NA
WP_024940872.1\|1101081_1101639_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|1101635_1101902_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_004152203.1\|1103176_1103422_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152202.1\|1103439_1104006_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152979.1\|1104573_1104999_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|1104998_1105949_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|1105936_1107127_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|1107479_1108733_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|1108743_1109847_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
1109384:1109398	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1761437 : 1800683

Salmonella_phage(82.5%)

integrase,terminase,portal,plate,tail,capsid,lysis,head

attL 1761345:1761363|attR 1800755:1800773

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1761345:1761363	attL	NA	NA	NA	NA
WP_004151720.1\|1761437_1762490_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
WP_004152765.1\|1762908_1764393_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004150866.1\|1764491_1765436_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|1765447_1766326_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_000188448.1\|1766471_1766693_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|1766725_1767235_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|1767242_1767443_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|1767406_1767748_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_004150864.1\|1767815_1768049_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752622.1\|1768048_1768276_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150863.1\|1768272_1769130_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_004150862.1\|1769126_1771541_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_004152765.1\|1772019_1773504_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_001154434.1\|1773604_1773793_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1773803_1774037_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|1774151_1774829_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|1775104_1776847_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|1776908_1777934_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|1777933_1779700_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|1779842_1780676_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|1780692_1781751_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|1781754_1782405_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|1782500_1782965_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|1782964_1783168_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|1783171_1783387_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|1783367_1783877_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|1783881_1784265_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|1784261_1784690_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896172.1\|1784785_1785217_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|1785209_1785656_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004150857.1\|1785652_1786345_-	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|1786439_1787012_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_032441567.1\|1787008_1787371_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
WP_002896182.1\|1787357_1788266_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|1788258_1788858_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|1788859_1791811_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|1791814_1792546_+	hypothetical protein	NA	NA	NA	NA
WP_002896188.1\|1792542_1792746_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|1792775_1793852_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|1793990_1795163_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|1795172_1795688_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|1795740_1796040_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|1796054_1796174_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896222.1\|1796166_1798794_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896224.1\|1798790_1799276_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|1799272_1800373_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|1800464_1800683_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
1800755:1800773	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1835099 : 1844563

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|1835099_1836215_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|1836211_1838152_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|1838228_1838450_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|1838775_1839093_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|1839123_1841403_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|1841523_1841742_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|1842095_1842797_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|1842841_1844563_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_4

2072594 : 2160436

Klebsiella_phage(44.19%)

integrase,terminase,portal,tail,tRNA,capsid,lysis,head

attL 2068892:2068906|attR 2127012:2127026

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2068892:2068906	attL	NA	NA	NA	NA
WP_004150803.1\|2072594_2073701_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004150802.1\|2073757_2074216_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004150801.1\|2074232_2074883_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150800.1\|2075123_2076374_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_032418030.1\|2076491_2077619_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	4.4e-119	58.4
WP_012542206.1\|2077599_2077845_-	excisionase	NA	NA	NA	NA
WP_062954978.1\|2077897_2080036_-	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	5.6e-99	42.7
WP_014228879.1\|2080177_2080522_-	transcriptional regulator	NA	NA	NA	NA
WP_023279538.1\|2080564_2080759_-	DUF1482 family protein	NA	NA	NA	NA
WP_040234937.1\|2081149_2081464_+	hypothetical protein	NA	NA	NA	NA
WP_077257742.1\|2081785_2082223_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
WP_071561166.1\|2082311_2082536_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
WP_046622349.1\|2082538_2083093_+	hypothetical protein	NA	NA	NA	NA
WP_077265602.1\|2083152_2084157_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
WP_047667474.1\|2084149_2084614_+	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
WP_032443841.1\|2084627_2085068_+	hypothetical protein	NA	NA	NA	NA
WP_062954977.1\|2085416_2086808_-	hypothetical protein	NA	NA	NA	NA
WP_062954989.1\|2086896_2087766_-	hypothetical protein	NA	NA	NA	NA
WP_062954976.1\|2088117_2088831_+	hypothetical protein	NA	NA	NA	NA
WP_062954975.1\|2089004_2090366_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
WP_004152765.1\|2091206_2092691_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_025368263.1\|2092769_2093003_+	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
WP_077255782.1\|2093014_2093305_+	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
WP_025861428.1\|2093345_2093738_+	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
WP_062955112.1\|2093937_2094969_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
WP_025861432.1\|2094985_2095588_+	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
WP_004147997.1\|2095831_2096035_-	hypothetical protein	NA	NA	NA	NA
WP_004147999.1\|2096772_2096922_-	small membrane protein	NA	NA	NA	NA
WP_016160648.1\|2097839_2098055_+\|lysis	phage S lysis protein	A5LH82	Enterobacteria_phage	2.7e-30	88.7
WP_032432826.1\|2098054_2098552_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
WP_016160650.1\|2098548_2098899_+	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
WP_049115059.1\|2099848_2100286_+	hypothetical protein	NA	NA	NA	NA
WP_032749552.1\|2100324_2100549_-	hypothetical protein	NA	NA	NA	NA
WP_032428746.1\|2100875_2101238_+	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
WP_023297386.1\|2101189_2101513_+	hypothetical protein	NA	NA	NA	NA
WP_014907818.1\|2101509_2101941_+	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
WP_012542168.1\|2102189_2102624_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_021462603.1\|2102623_2104345_+\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
WP_017898992.1\|2104338_2104518_+	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_023279520.1\|2104517_2105777_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
WP_014907815.1\|2105813_2106734_+	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
WP_023328094.1\|2106811_2108098_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
WP_049010370.1\|2108156_2108417_+	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
WP_020317538.1\|2108397_2108715_+\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
WP_023328092.1\|2108711_2109050_+\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
WP_017880258.1\|2109030_2109420_+	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
WP_023328091.1\|2109416_2109818_+	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
WP_023328090.1\|2109849_2110311_+	hypothetical protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_014228914.1\|2110368_2110734_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_023328089.1\|2110966_2114302_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
WP_023328088.1\|2114301_2114640_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
WP_023328087.1\|2114636_2115392_+\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
WP_047666389.1\|2115393_2116104_+	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
WP_047666390.1\|2116145_2116568_+	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
WP_023328085.1\|2116594_2117188_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
WP_062955111.1\|2117250_2129955_+	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
2127012:2127026	attR	NA	NA	NA	NA
WP_023328083.1\|2130023_2131520_+\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
WP_004892953.1\|2131674_2131827_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_004150799.1\|2132099_2132813_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004150798.1\|2132809_2133202_-	amino acid-binding protein	NA	NA	NA	NA
WP_004150797.1\|2133194_2133518_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004140530.1\|2133954_2134182_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004140529.1\|2134294_2135488_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004150795.1\|2136109_2136295_+	general stress protein	NA	NA	NA	NA
WP_004150794.1\|2136385_2136880_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140514.1\|2136906_2137413_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140512.1\|2137429_2138317_+	manganese catalase family protein	NA	NA	NA	NA
WP_004150793.1\|2138372_2139779_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140509.1\|2139775_2140786_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140506.1\|2140901_2141099_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|2141665_2142298_+	DNA-binding protein	NA	NA	NA	NA
WP_158208744.1\|2142276_2142432_-	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|2142914_2143601_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004140497.1\|2143911_2145420_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150788.1\|2145540_2146431_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004150787.1\|2146437_2148222_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150785.1\|2148295_2149504_-	HD domain-containing protein	NA	NA	NA	NA
WP_004150784.1\|2149806_2150850_+	type II asparaginase	NA	NA	NA	NA
WP_004148038.1\|2151511_2152426_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150783.1\|2152515_2153154_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004140489.1\|2153284_2153548_+	DUF2534 family protein	NA	NA	NA	NA
WP_004140488.1\|2153607_2153733_-	hypothetical protein	NA	NA	NA	NA
WP_099119317.1\|2153850_2153925_-	protein YoaJ	NA	NA	NA	NA
WP_004150782.1\|2153924_2154026_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_004150781.1\|2154083_2155097_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
WP_004150780.1\|2155397_2155637_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004150779.1\|2155626_2155983_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_004150778.1\|2155969_2156479_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004140471.1\|2156624_2157317_+	CTP synthase	NA	NA	NA	NA
WP_004150777.1\|2157348_2158533_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_002901073.1\|2158634_2159426_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901080.1\|2159409_2159856_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_002901088.1\|2159935_2160436_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_5

2288137 : 2304740

Enterobacteria_phage(33.33%)

transposase,integrase

attL 2290817:2290832|attR 2311866:2311881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004140269.1\|2288137_2288947_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
WP_004140266.1\|2288948_2289941_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004151901.1\|2289940_2290831_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
2290817:2290832	attL	NA	NA	NA	NA
WP_004153574.1\|2291007_2292195_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
WP_004151899.1\|2292402_2293065_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
WP_004151898.1\|2293061_2293490_-	hypothetical protein	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
WP_004201102.1\|2293486_2294167_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
WP_088224434.1\|2294168_2294456_-	hypothetical protein	NA	NA	NA	NA
WP_004201103.1\|2294452_2295298_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
WP_004201105.1\|2295313_2295598_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
WP_004135674.1\|2295686_2295881_-	hypothetical protein	NA	NA	NA	NA
WP_004201108.1\|2296309_2296513_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
WP_004201109.1\|2296594_2297671_-	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
WP_019405077.1\|2298593_2298713_-	hypothetical protein	NA	NA	NA	NA
WP_004201113.1\|2298735_2299434_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
WP_004201115.1\|2299545_2299773_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_001548453.1\|2299813_2300035_+	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_001067855.1\|2300431_2301136_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001261740.1\|2302117_2302909_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|2303072_2303420_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001067855.1\|2304035_2304740_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
2311866:2311881	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2344452 : 2382918

uncultured_Caudovirales_phage(34.04%)

integrase,terminase

attL 2342533:2342547|attR 2351473:2351487

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2342533:2342547	attL	NA	NA	NA	NA
WP_004152144.1\|2344452_2345214_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|2345430_2346963_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|2347161_2347710_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|2347906_2349088_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|2349068_2349311_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152149.1\|2349489_2349969_-	hypothetical protein	NA	NA	NA	NA
WP_004152150.1\|2349965_2350178_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152151.1\|2350174_2350399_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|2350388_2351099_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|2351104_2351623_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
2351473:2351487	attR	NA	NA	NA	NA
WP_004152154.1\|2351727_2352555_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|2352551_2352746_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|2352742_2353168_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004177208.1\|2353164_2353383_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_004152157.1\|2353354_2353609_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004152158.1\|2353601_2353967_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152159.1\|2354136_2354325_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|2354317_2354632_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|2354802_2355471_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|2355568_2355790_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|2356366_2358025_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004198233.1\|2358026_2358989_+	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|2358985_2359462_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|2359458_2360241_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004146526.1\|2360646_2360895_+	hypothetical protein	NA	NA	NA	NA
WP_004152169.1\|2360897_2361428_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|2361424_2361814_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|2362048_2362369_+	hypothetical protein	NA	NA	NA	NA
WP_004152171.1\|2362470_2363223_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152172.1\|2363173_2364574_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152173.1\|2364811_2366263_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|2366318_2366867_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|2366918_2368121_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|2368124_2368619_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_001132269.1\|2368630_2369572_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000725700.1\|2369611_2369893_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|2369861_2370281_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|2370277_2370784_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|2370783_2371170_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|2371264_2371705_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|2371708_2372854_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004199809.1\|2372864_2373305_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152564.1\|2373308_2373734_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|2373769_2373922_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|2373911_2375915_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152567.1\|2375914_2376514_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152568.1\|2376514_2376817_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152569.1\|2376819_2377842_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|2377841_2378183_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004199301.1\|2378232_2378415_+	hypothetical protein	NA	NA	NA	NA
WP_004152571.1\|2378457_2379024_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|2379077_2379731_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|2379732_2380086_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|2380085_2381282_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|2381278_2382052_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152576.1\|2382051_2382918_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5

DBSCAN-SWA_7

2610410 : 2616838

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|2610410_2611031_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|2611023_2612289_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_002210513.1\|2613462_2614224_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|2614244_2615105_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002904006.1\|2615402_2615663_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620097.1\|2615749_2616838_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0

DBSCAN-SWA_8

3263482 : 3346390

Enterobacteria_phage(31.48%)

integrase,terminase,holin,plate,tail,head

attL 3292280:3292295|attR 3342282:3342297

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175538.1\|3263482_3263926_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004189400.1\|3263928_3264471_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025403903.1\|3264445_3265492_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004200296.1\|3265491_3267255_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004200298.1\|3267312_3270801_-	hypothetical protein	NA	NA	NA	NA
WP_004198077.1\|3270784_3271942_-	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|3271945_3272212_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_062955036.1\|3272454_3272964_-	hypothetical protein	NA	NA	NA	NA
WP_062955037.1\|3272960_3273281_-	hypothetical protein	NA	NA	NA	NA
WP_020802731.1\|3273277_3273469_-	hypothetical protein	NA	NA	NA	NA
WP_062955038.1\|3273465_3273975_-	hypothetical protein	NA	NA	NA	NA
WP_062955039.1\|3274068_3274437_-	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|3274433_3274763_-	hypothetical protein	NA	NA	NA	NA
WP_021464429.1\|3274759_3274942_-	hypothetical protein	NA	NA	NA	NA
WP_004175505.1\|3274942_3276298_-	hypothetical protein	NA	NA	NA	NA
WP_002910586.1\|3276591_3277101_-	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|3277337_3277844_-	hypothetical protein	NA	NA	NA	NA
WP_002910593.1\|3277840_3278350_-	hypothetical protein	NA	NA	NA	NA
WP_073547072.1\|3278350_3279274_-	S-type Pyocin	NA	NA	NA	NA
WP_063048274.1\|3280081_3280483_-	hypothetical protein	NA	NA	NA	NA
WP_099143948.1\|3281276_3281792_-	hypothetical protein	NA	NA	NA	NA
WP_004184628.1\|3281792_3283148_-	hypothetical protein	NA	NA	NA	NA
WP_062955013.1\|3283171_3285658_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_062955014.1\|3286116_3287814_-	OmpA family protein	NA	NA	NA	NA
WP_062955015.1\|3287817_3288471_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004200314.1\|3288467_3289808_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004200315.1\|3290045_3290312_-	hypothetical protein	NA	NA	NA	NA
WP_002910650.1\|3290375_3290705_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004899028.1\|3290774_3291359_+	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_014907357.1\|3291384_3292083_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910657.1\|3292273_3292756_+	cold shock domain-containing protein	NA	NA	NA	NA
3292280:3292295	attL	NA	NA	NA	NA
WP_094819165.1\|3293730_3294048_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.4e-22	52.0
WP_094819166.1\|3294047_3294287_-	hypothetical protein	K7P7N3	Enterobacteria_phage	1.4e-14	49.4
WP_000797449.1\|3294393_3295704_-	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	3.8e-34	32.0
WP_094937835.1\|3295841_3297104_+	hypothetical protein	NA	NA	NA	NA
WP_094937837.1\|3297185_3297953_-	hypothetical protein	NA	NA	NA	NA
WP_094819137.1\|3300254_3301385_-\|tail	phage tail protein	Q8HAM8	Burkholderia_phage	5.3e-40	40.1
WP_101992375.1\|3301386_3301974_-	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	1.1e-33	42.9
WP_094819139.1\|3301966_3303199_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.5e-104	50.5
WP_001518114.1\|3303206_3303563_-	hypothetical protein	NA	NA	NA	NA
WP_094819140.1\|3304017_3304608_-	hypothetical protein	A0A077KAY0	Edwardsiella_phage	1.2e-24	35.3
WP_094819141.1\|3304597_3305467_-	hypothetical protein	NA	NA	NA	NA
WP_019725008.1\|3305463_3305769_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	3.6e-20	48.5
WP_094819142.1\|3305770_3306610_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	2.6e-28	33.5
WP_094819143.1\|3306613_3308572_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	3.4e-42	38.4
WP_094819144.1\|3308776_3309253_-	hypothetical protein	A0A068CGG2	Acinetobacter_phage	1.2e-06	29.1
WP_019724823.1\|3309304_3309559_-	hypothetical protein	K7PM89	Enterobacteria_phage	2.3e-20	74.6
WP_094819145.1\|3309561_3310317_-	DNA-binding protein	K7PGT4	Enterobacteria_phage	6.2e-61	51.4
WP_009308049.1\|3310498_3310942_-	hypothetical protein	NA	NA	NA	NA
WP_094819146.1\|3310941_3312423_-	DUF3383 domain-containing protein	Q2NPD0	Xanthomonas_phage	5.6e-58	34.2
WP_094819147.1\|3312426_3312978_-	hypothetical protein	NA	NA	NA	NA
WP_029497286.1\|3312959_3313328_-	hypothetical protein	Q6UJ26	Burkholderia_virus	1.2e-06	29.8
WP_094819148.1\|3313324_3313888_-	hypothetical protein	H9C0W2	Aeromonas_phage	1.8e-17	32.4
WP_041937856.1\|3313890_3314334_-	DUF4054 domain-containing protein	A0A1X9SF97	Acinetobacter_phage	1.1e-12	38.2
WP_094819149.1\|3314333_3314660_-	hypothetical protein	H9C0V9	Aeromonas_phage	3.6e-10	41.6
WP_019724831.1\|3314661_3315699_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.9e-84	50.0
WP_001518133.1\|3315698_3316181_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	4.5e-33	50.3
WP_094819150.1\|3316182_3317352_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	2.6e-58	37.5
WP_025713735.1\|3317355_3318054_-\|head	head morphogenesis protein	H9C0V1	Aeromonas_phage	8.3e-60	50.4
WP_094819151.1\|3318106_3319627_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	6.7e-107	45.4
WP_094819152.1\|3319627_3321304_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	1.5e-248	74.1
WP_072040663.1\|3321305_3321938_-	hypothetical protein	A0A2I7RHH8	Vibrio_phage	5.4e-42	48.5
WP_001064347.1\|3322263_3322782_-	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	2.9e-94	100.0
WP_094819153.1\|3323066_3323456_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	1.5e-23	49.2
WP_094819158.1\|3323452_3323950_-	lysozyme	K7P7Q3	Enterobacteria_phage	2.4e-77	83.0
WP_012542609.1\|3323927_3324197_-\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-32	78.3
WP_094819154.1\|3324793_3325603_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.0e-121	77.3
WP_094819155.1\|3325599_3325740_-	YlcG family protein	NA	NA	NA	NA
WP_094819156.1\|3325736_3326099_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	4.7e-51	80.7
WP_004141687.1\|3326095_3326386_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	5.3e-45	88.5
WP_004884194.1\|3326378_3326549_-	NinE family protein	K7P7K0	Enterobacteria_phage	7.2e-10	65.5
WP_004151288.1\|3326548_3327004_-	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
WP_023283338.1\|3328580_3328793_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	2.4e-10	43.9
WP_032419573.1\|3329216_3329465_-	hypothetical protein	NA	NA	NA	NA
WP_004151294.1\|3329461_3329968_-	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
WP_004151295.1\|3329964_3330258_-	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
WP_094819157.1\|3330254_3331124_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.2e-96	70.1
WP_101307363.1\|3331108_3331963_-	replication protein	K7PGT1	Enterobacteria_phage	3.1e-61	54.5
WP_040182097.1\|3332322_3332544_-	helix-turn-helix domain-containing protein	Q716D6	Shigella_phage	1.8e-13	55.1
WP_029363661.1\|3332646_3333342_+	helix-turn-helix transcriptional regulator	K7P7I4	Enterobacteria_phage	8.2e-76	62.4
WP_129111273.1\|3333361_3333796_+	hypothetical protein	NA	NA	NA	NA
WP_008807814.1\|3334258_3334465_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_094819107.1\|3334544_3335516_+	hypothetical protein	M9P0E1	Enterobacteria_phage	1.8e-65	91.0
WP_004135670.1\|3335523_3335721_+	hypothetical protein	NA	NA	NA	NA
WP_158225006.1\|3335717_3335876_+	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	4.5e-06	57.8
WP_094819108.1\|3335872_3336526_+	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	3.3e-63	61.8
WP_064179354.1\|3336509_3336800_+	hypothetical protein	NA	NA	NA	NA
WP_024622733.1\|3336796_3337102_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_094819109.1\|3337098_3337626_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	4.9e-57	61.6
WP_094819110.1\|3337622_3338393_+	dcm methylase	D5LH17	Escherichia_phage	4.2e-65	52.0
WP_004151314.1\|3338389_3338608_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
WP_094819111.1\|3338609_3338825_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	1.9e-07	48.1
WP_016244760.1\|3338984_3339230_+	excisionase family protein	A0A286S2A4	Klebsiella_phage	3.8e-36	93.4
WP_021312745.1\|3339272_3340535_+\|integrase	site-specific integrase	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
WP_004152314.1\|3340775_3341582_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175494.1\|3341596_3342892_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
3342282:3342297	attR	NA	NA	NA	NA
WP_004189341.1\|3343195_3344122_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004189338.1\|3344220_3344697_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004148802.1\|3344746_3346390_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4

DBSCAN-SWA_9

3618387 : 3630819

Escherichia_phage(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062955125.1\|3618387_3619719_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.9e-15	29.1
WP_062955124.1\|3619708_3620542_-	ABC transporter permease	NA	NA	NA	NA
WP_000019473.1\|3621245_3622226_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_094940778.1\|3622271_3622601_-	glycosyltransferase	NA	NA	NA	NA
WP_015958693.1\|3622687_3623242_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_048996045.1\|3623256_3624147_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_063002077.1\|3624178_3625048_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_073547076.1\|3625061_3626126_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
WP_062955151.1\|3626965_3627970_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	4.0e-31	29.2
WP_016947628.1\|3628370_3628490_+	small membrane protein	NA	NA	NA	NA
WP_000704907.1\|3628918_3630085_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
WP_004175260.1\|3630264_3630819_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6

DBSCAN-SWA_10

3676022 : 3682928

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062955084.1\|3676022_3677501_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|3677497_3678220_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|3678538_3679900_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_002912636.1\|3680145_3681039_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004899467.1\|3681280_3682054_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004175147.1\|3682064_3682928_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_11

3985377 : 4067068

Salmonella_phage(35.71%)

transposase,integrase,terminase,holin,tail,tRNA,protease

attL 3991019:3991036|attR 4066057:4066074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152006.1\|3985377_3987381_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_002913800.1\|3987390_3988266_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_002913801.1\|3988385_3989099_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.1e-38	35.7
WP_002913802.1\|3989314_3990349_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_002913803.1\|3990365_3991244_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
3991019:3991036	attL	NA	NA	NA	NA
WP_004145648.1\|3991331_3991964_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_002913805.1\|3991967_3992438_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_002913806.1\|3992499_3993561_-	AI-2E family transporter	NA	NA	NA	NA
WP_002913807.1\|3993783_3995247_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_002913810.1\|3995256_3995616_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_002913812.1\|3995743_3996655_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
WP_020947395.1\|3996651_3997353_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913824.1\|3997451_3998738_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_002913827.1\|3998833_3999460_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913829.1\|3999677_4001111_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913833.1\|4001120_4002014_-	ROK family protein	NA	NA	NA	NA
WP_002913836.1\|4002277_4003315_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_004152007.1\|4003311_4003953_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
WP_002913838.1\|4004133_4006194_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_002913839.1\|4006197_4007730_+	exopolyphosphatase	NA	NA	NA	NA
WP_002913841.1\|4007783_4010012_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_002913843.1\|4010364_4010556_+	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
WP_002913846.1\|4010652_4011540_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002913847.1\|4011637_4012870_+	MFS transporter	NA	NA	NA	NA
WP_004162150.1\|4013163_4014342_+	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_004152009.1\|4014325_4016194_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_062955008.1\|4016380_4016881_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
WP_062955009.1\|4016877_4017507_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.8e-90	76.9
WP_023339240.1\|4017496_4017802_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
WP_062955010.1\|4017788_4018193_-	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
WP_077265603.1\|4018279_4019596_-	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
WP_000608644.1\|4020704_4021967_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_073547080.1\|4022835_4023816_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.5e-184	98.5
WP_153233543.1\|4023797_4025063_+	hypothetical protein	NA	NA	NA	NA
WP_062955131.1\|4025103_4025367_-	hypothetical protein	NA	NA	NA	NA
WP_062955133.1\|4028194_4028491_+	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
WP_062955135.1\|4028967_4031724_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
WP_062955136.1\|4031723_4033634_-	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
WP_062955137.1\|4033633_4036168_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
WP_032447858.1\|4036178_4036718_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
WP_004152438.1\|4036717_4037182_-	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
WP_062955138.1\|4037181_4039659_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
WP_062955139.1\|4039658_4040264_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
WP_004152441.1\|4040263_4040587_-	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
WP_062955141.1\|4040637_4040979_-	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
WP_020953461.1\|4040989_4041427_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
WP_004200546.1\|4041480_4042467_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
WP_032441397.1\|4042481_4043162_-	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
WP_004152446.1\|4043164_4043461_-	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
WP_032441398.1\|4043457_4045140_-\|tail	tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
WP_004141368.1\|4045154_4045361_-	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
WP_004200550.1\|4046114_4046486_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
WP_062955142.1\|4046529_4048005_-	hypothetical protein	Q858H3	Salmonella_phage	6.4e-280	93.1
WP_032441400.1\|4048001_4048586_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
WP_032418540.1\|4048663_4048921_-	hypothetical protein	NA	NA	NA	NA
WP_004152765.1\|4049324_4050809_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_023339258.1\|4050905_4051244_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
WP_032441458.1\|4051236_4051440_-	hypothetical protein	NA	NA	NA	NA
WP_050491799.1\|4051439_4052060_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
WP_029602865.1\|4052056_4052350_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
WP_072200041.1\|4052349_4052817_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
WP_032441401.1\|4053110_4053755_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
WP_032441402.1\|4053751_4053943_-	hypothetical protein	NA	NA	NA	NA
WP_062955107.1\|4053926_4054337_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
WP_048328152.1\|4054529_4054877_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
WP_032418532.1\|4054996_4055782_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_004207253.1\|4055778_4056546_-	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152537.1\|4056545_4056755_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004152538.1\|4056901_4057135_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004144290.1\|4057289_4057871_+	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
WP_004164029.1\|4058237_4058537_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_062955106.1\|4058533_4059355_+	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
WP_062955105.1\|4059351_4060233_+	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
WP_062955104.1\|4060281_4060530_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
WP_009485475.1\|4060639_4060933_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_048264082.1\|4060925_4061084_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
WP_062955103.1\|4061080_4061743_+	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
WP_004197356.1\|4061739_4062333_+	MT-A70 family protein	T1SA14	Salmonella_phage	6.3e-109	91.9
WP_063002073.1\|4062329_4062572_+	hypothetical protein	NA	NA	NA	NA
WP_062955102.1\|4062514_4063765_-\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
WP_004151979.1\|4063956_4065534_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004151980.1\|4065601_4067068_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
4066057:4066074	attR	NA	NA	NA	NA

DBSCAN-SWA_12

4138418 : 4220920

Salmonella_phage(70.0%)

transposase,integrase,coat,terminase,portal,plate,tail,tRNA,capsid,lysis,head

attL 4183107:4183153|attR 4221460:4221506

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|4138418_4139156_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|4139287_4140619_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|4140664_4141048_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|4141361_4142051_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|4142108_4143194_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|4143397_4143823_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|4143892_4144591_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004188841.1\|4144625_4147277_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|4147397_4148753_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|4148794_4149118_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|4149121_4150420_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|4156379_4158953_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|4159082_4159814_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|4159810_4160791_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|4160922_4161660_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|4161930_4162266_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|4162372_4162420_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|4162520_4163681_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|4163677_4164550_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|4164612_4165734_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|4165743_4166814_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|4167156_4167666_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|4167658_4168882_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|4168895_4169378_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|4169386_4170757_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|4170813_4171272_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|4171391_4171739_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|4171778_4172546_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|4172577_4173126_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|4173144_4173393_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|4173652_4175017_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|4175180_4175972_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|4175991_4177278_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|4177397_4177988_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|4178112_4178991_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|4179077_4180739_+	DNA repair protein RecN	NA	NA	NA	NA
WP_002914160.1\|4180886_4181228_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|4181294_4181585_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|4181574_4182051_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|4182161_4182644_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
4183107:4183153	attL	NA	NA	NA	NA
WP_004150980.1\|4183247_4183625_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|4183652_4183871_-	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|4183937_4185032_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|4185028_4185514_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150984.1\|4185510_4188141_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
WP_002896220.1\|4188133_4188253_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|4188267_4188567_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|4188619_4189135_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|4189144_4190317_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|4190465_4191539_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004200602.1\|4191590_4192709_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|4192718_4194668_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|4194669_4195341_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|4195333_4196242_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|4196228_4196591_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|4196587_4197160_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|4197254_4198121_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|4198143_4198590_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|4198582_4199005_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150998.1\|4199100_4199529_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|4199525_4199909_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|4199913_4200423_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|4200403_4200619_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|4200622_4200826_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|4200825_4201290_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004134644.1\|4201385_4202039_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151003.1\|4202042_4203095_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|4203111_4203945_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_019405037.1\|4204085_4205849_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151006.1\|4205848_4206892_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|4206948_4207218_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|4207739_4208741_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|4208740_4209820_+	hypothetical protein	NA	NA	NA	NA
WP_004151009.1\|4209806_4210490_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|4210585_4210819_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|4210830_4211019_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151012.1\|4213089_4215474_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151013.1\|4215470_4216322_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|4216318_4216546_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|4216545_4216779_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|4216846_4217185_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|4217148_4217349_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|4217356_4217866_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|4217898_4218141_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|4218263_4218893_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_062955148.1\|4218895_4219894_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
WP_000019473.1\|4219939_4220920_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
4221460:4221506	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4940735 : 4989578

uncultured_Caudovirales_phage(66.67%)

terminase,portal,tail,protease,tRNA,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|4940735_4941230_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|4941233_4941872_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|4941841_4942126_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|4942183_4942576_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|4942591_4943020_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|4943285_4944413_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|4944603_4945002_+	DUF1043 family protein	NA	NA	NA	NA
WP_062954970.1\|4945175_4946543_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|4946630_4947689_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|4947825_4948764_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|4949178_4949649_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|4950024_4950288_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|4950386_4950653_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|4950703_4950979_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|4951058_4953026_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|4953031_4953964_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|4953971_4954175_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|4954306_4955236_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|4955271_4956717_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|4956805_4960603_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|4960640_4962110_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|4962112_4962694_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|4962701_4963190_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|4963189_4964182_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|4964252_4965296_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|4965601_4967542_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|4967621_4967813_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|4968041_4969043_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|4969042_4969651_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|4969874_4970327_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|4970349_4970817_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|4970827_4972177_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|4972287_4972530_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|4972519_4973971_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|4973982_4974864_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|4975221_4976187_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|4976211_4976508_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|4976661_4976853_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|4976855_4978517_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|4978500_4978857_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150959.1\|4979132_4979576_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|4979575_4979875_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|4979871_4980207_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|4980203_4981445_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|4981446_4982007_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|4982058_4983225_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|4983488_4984001_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|4984049_4984385_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|4984727_4986863_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|4986862_4987228_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|4987224_4987593_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004150967.1\|4987589_4987904_-	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|4987896_4988085_-	hypothetical protein	NA	NA	NA	NA
WP_106918304.1\|4988077_4988347_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_004150969.1\|4988798_4989578_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP025462

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025462_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025462_1

42926-43013

Orphan

Consensus_repeat	Method
CGGGGGGAATACTTCCAGCCAGCGGGT	CRISPRCasFinder

1 spacers

RT,DinG

The CRISPR arrays of NZ_CP025462_1

>merge|NZ_CP025462|1|42926-43013|CRISPRCasFinder
CGGGGGGAATACTTCCAGCCAGCGGGTAACCGTGGACAACACCACCGATAACCCCCGCACACGGGGGGAATACTTCCAGCCAGCGGGT

>NZ_CP025462|1|1|42926-43013|CRISPRCasFinder
CGGGGGGAATACTTCCAGCCAGCGGGT	AACCGTGGACAACACCACCGATAACCCCCGCACA
CGGGGGGAATACTTCCAGCCAGCGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025462.1\|WP_004152765.1\|40420_41905_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP025462.1\|WP_048268734.1\|44221_44929_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_100280317.1\|31383_31578_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_085929673.1\|32110_33279_+\|IS3-like-element-ISEc52-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP025462.1\|WP_004181895.1\|38097_38541_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP025462.1\|WP_016947074.1\|49260_49671_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_016947078.1\|44922_46797_-\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP025462.1\|WP_004026354.1\|37630_38101_-\|RES-family-NAD+-phosphorylase	unknown	unknown	gnl\|CDD\|378053
NZ_CP025462.1\|WP_004181891.1\|43185_43977_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369811
NZ_CP025462.1\|WP_004181893.1\|39912_40335_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP025462.1\|WP_029505551.1\|46799_47366_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	unknown	unknown	gnl\|CDD\|187858
NZ_CP025462.1\|WP_000589001.1\|34020_35361_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379233
NZ_CP025462.1\|WP_016947072.1\|50117_50513_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_004026352.1\|37260_37521_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_065953873.1\|48720_49209_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_016947073.1\|49700_50108_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_004181894.1\|38641_39913_-\|translesion-error-prone-DNA-polymerase-V-subunit-UmuC	unknown	unknown	gnl\|CDD\|179607
NZ_CP025462.1\|WP_065953875.1\|47368_48160_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_065953874.1\|48222_48636_-\|NB-ARC-domain-protein	unknown	unknown	unknown
NZ_CP025462.1\|WP_078207741.1\|35508_36690_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
NZ_CP025462.1\|WP_004152765.1\|40420_41905_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.80723e-148
NZ_CP025462.1\|WP_029505551.1\|46799_47366_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	6.97106e-05
NZ_CP025462.1\|WP_085929673.1\|32110_33279_+\|IS3-like-element-ISEc52-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.03022e-145
NZ_CP025462.1\|WP_078207741.1\|35508_36690_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.27548e-12
NZ_CP025462.1\|WP_004181895.1\|38097_38541_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	7.31498e-30
NZ_CP025462.1\|WP_016947078.1\|44922_46797_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	7.90775e-36
NZ_CP025462.1\|WP_000589001.1\|34020_35361_-\|ISNCY-family-transposase	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	4.33401e-08
NZ_CP025462.1\|WP_004026354.1\|37630_38101_-\|RES-family-NAD+-phosphorylase	gnl\|CDD\|378053	pfam08808, RES, RES domain. This presumed domain contains 3 highly conserved polar groups that could form an active site. These are an arginine, glutamate and serine, hence the RES domain. The domain is found widely distributed in bacteria. The domain is about 150 residues in length.	8.22357e-28
NZ_CP025462.1\|WP_004181891.1\|43185_43977_-\|hypothetical-protein	gnl\|CDD\|369811	pfam08317, Spc7, Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.	0.000936611
NZ_CP025462.1\|WP_004181893.1\|39912_40335_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	2.45197e-57
NZ_CP025462.1\|WP_004181894.1\|38641_39913_-\|translesion-error-prone-DNA-polymerase-V-subunit-UmuC	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	0

>NZ_CP025462.1|WP_004152765.1|40420_41905_-|group-II-intron-reverse-transcriptase/maturase
MYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
>NZ_CP025462.1|WP_004181893.1|39912_40335_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MFLIPMENPEKIAIPLFLERCAAGFPSPAQDYTSSELDLNDYCIRHPSATYFVRAQGNSMQDVGMRDGDLLVVDRSLRPQHRDIVIAEVDGGFTVKQLQTTPRLALLPMNNAYSPIYPDPDELTIFGVVTHWVHRARGNL
>NZ_CP025462.1|WP_004181894.1|38641_39913_-|translesion-error-prone-DNA-polymerase-V-subunit-UmuC
MYALADVNSFYCSVEKCFRPDLRDKPVVVLSNNDGCVIARCKLAKKFGIPMGLPWFKLREQRFPEPVIAFSSNYELYASMSARVHFCLEELSSRVEEYSIDESFIWAGGIDNCMTFEEYGHQLRDHVFRCTGLTIGVGLAPTKTLAKACQYSSKTWPQFGGVLALTAGQRNRIDKMLSLMPVEEVWGVGGRTTSKLHAMGITTALELARTNPAFIRRNFTVVLERTVRELRGESCIDLEDAPPPKQQIICSRSFGQRITTYESMRQAICQYAERAAEKLRQERQYCGQVSVFIKTSPFSKHEPYYSKVSSEQLCIPSRDTRDIIAAAGRALDKIWKEGHNYAKAGVMLNDFRPCGVTQLSLFDEGRSYANSDALMNVLDTINNSGKGKVWFAGRGIAPAWSMKRDMLSPAYTTRWDSIPIATL
>NZ_CP025462.1|WP_004181895.1|38097_38541_-|DUF2384-domain-containing-protein
MKTFSLSSTPARPQRLWQVAGLNNADGVALLGQINEGLDGKVVNRITDWARITQNDLRKMSGIPSTTFSRSVKARFNPEQSERLVRIIRVIDRAVDLFEGDREAAQKWLNEPNRALSWKVPADLMASETGAYEVIKLITRLEHGVYS
>NZ_CP025462.1|WP_004026354.1|37630_38101_-|RES-family-NAD+-phosphorylase
MILYRLTKTKYLSTAWTGYGAKEAGGRWNSVGVSMVYVSETASLTMLETLVHLHAAQIMDSFTLLSIDVPDELIQSANMDELPGNWADEDAPQELADYGDAWSFTRSSVALRVPSALSPVEFNYLLNPEHPEFYGIVQKAQQIPFRFDSRLKPDRK
>NZ_CP025462.1|WP_004026352.1|37260_37521_+|hypothetical-protein
MTLTAYYQLRNTKAAGLGFELLTSEPGAFIVLEECSYEKPYEIARYGHNGSAGDRSNAFSCAMNKARSLQNYSGAKLDYNVYEETA
>NZ_CP025462.1|WP_078207741.1|35508_36690_+|IS481-family-transposase
MLMQHIGVGYFGYYRATAYAMKHSLMPEIAKLRMKALNFWDKHGIRAAADAFDVSTRTLYWWRRLLRTGGPEALIPRSKAPLVRRSRHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCEARHFTCPSTSTIGRIIAGAHDKMRMIPVRLSARGKARLIKKRSVKPRRPKQYRPVKTGELIGMDAIELRMGDLRRYIITMIDEHSDYALALAVPSLNSDITSHFFSKATKLFPVAIRQVVTDNGKEFLGNFDKTLQEASIKHIWTYPYTPKMNATCERFNRTLREQFIEFNELLLFEDLNLFNQRMAEYLVLYNSKRPHKSLELMTPVDYILRESKNCNMWWTHTSPCLTAAKRLLCWCLVKQMASCGLLMKINVLRGFLLSASQHQNTQTS
>NZ_CP025462.1|WP_000589001.1|34020_35361_-|ISNCY-family-transposase
MIKETVTMSHKELDRLHIIQESLNRHITQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSRRRGKRPNNSFSTEFRATVISLLKGRYADFGPTLACEKLREIHGLCLSIETLRKWMVEEGIWRERRRKFARIYQRRMRRPSYGELIQIDGSPHDWFEGRGPKCTLIVFIDDATSALMALRFAPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAKGRVERANQTLQDRLVKEMRLQGISDIETANAWLPTFIEAYNNRFATPPRIADNAHLDVHHSEEELGYIFSLQAKRVLSKNLTFQYKSSAFQIRSEGRGYRLRHSVVTVCESFNGEIKVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARFDLRSKFYVKPKADHPWLTRRTQSNQQVKPPKLPRKKADPDKMD
>NZ_CP025462.1|WP_085929673.1|32110_33279_+|IS3-like-element-ISEc52-family-transposase
MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEIFKKGYRALDVRLPEQFSIIGKLRARYPVATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAVASFC
>NZ_CP025462.1|WP_100280317.1|31383_31578_+|hypothetical-protein
MSLQVSHYNMLRASHEVSQKVVVRTVITVRFVPEADFLKILRAQQLGAGHIKYPQNYREYLKFL
>NZ_CP025462.1|WP_004181891.1|43185_43977_-|hypothetical-protein
MLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTAR
>NZ_CP025462.1|WP_048268734.1|44221_44929_-|hypothetical-protein
MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSVRCDYLSPEKLSTAMFSPRIRRGLFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDFFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG
>NZ_CP025462.1|WP_016947078.1|44922_46797_-|DEAD/DEAH-box-helicase
MNTSAVFESAGLSLRKVQQDYIEAAAGALTQDHKVALISAETGVGKTLGYLVPALLILLKNPEAKFVIATNSHALMHQIFRSDRPLLEQIAEQCGIKVTFSRLMGKANYVSLEKVRGLLLMDEFTDLDTVKVLEKLANWSKPLVEFEEEYGELPAQITPEMVTYSIWDDIQDIDDIRLNALSANFIVTTHAMVMVDCMCNHRILGDKENMYLIIDEADIFVDMLEVWKQRRFNLRELTSAFNEHIPRNGVHVIDQLMNDVTSIAGDLHFCSTPAAVALFDNSFNALSKVGREIKNEAARKAFFDCIYSWEMLGLSGGQKGVGVSNKRREPALIAVNPFIGMNVGRYCTQWRSALLTSATLSITSTPETGMEWLCKALGLTSDTISIRKIFSPDVYGSMKLTIAGADFPKVFDDPKEQIFSGQWLKAVVEQLSCIHGPALVLTASHYETRMIANQLGEVSQPVYIQKAGQALSEIIKQYQEKPGILISAGASVGVSPRGENGEQIFQDLIITRIPFLPPDRMKAESLYGYLKERGYSRTFEAVNRNIYLENLRKVIRKAKQSVGRGIRSENDTVRIIILDPRFPEPTDLSSKHRSLEHIIPVRFRREYRSCEILSPAYFEEDIQC
>NZ_CP025462.1|WP_029505551.1|46799_47366_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MIFYDNAFRLRISHTSVYRIHQHLDFFMQERKGEKLPYSFKIFPGTGNDSRLLVRTATALELPGEKKRELILSEGHEIKFITSMAIFHKGTKLEGHGRRQFAPSDEASYQMALTKLAKAGLDSRQIVVSGPEFVHIDKGNARRGFMLPVFTVQGAATISNQQEAEMAIVYGVGPKRVFGCGFMHLAGE
>NZ_CP025462.1|WP_065953875.1|47368_48160_-|hypothetical-protein
MNHPVESVYSALTSILLPYMGEPAPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLKKAKELHQEIKNYSKKEMDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV
>NZ_CP025462.1|WP_065953874.1|48222_48636_-|NB-ARC-domain-protein
MKFNNNQNEKCLNKVLSYFSEKDTNLIVVIIGTSRSGKTLLAKRALFDGLFISPDEPIAGENFIQSLSNKDIIVDDVVLFDMRNVLKYVLHSLASGRKVILTGRPEDESLYQKLLLNLPKEISPLFIKLAGENSLYL
>NZ_CP025462.1|WP_065953873.1|48720_49209_-|hypothetical-protein
MNLDKNLPALVMKNVEDNMGVITKYLKQTEDNALVFIIGETGSGKSCLAELEFPDALYPTAQQFEECDHISEMFTGFDVVIDDIFRFDADKVLECILAVHASGHKVLVTGQPSDHELCIGLLSRLPVGYRAMFVNLMGHQDLQEMSGDGKDKGNSETKNLLH
>NZ_CP025462.1|WP_016947074.1|49260_49671_-|hypothetical-protein
MTQSEITVNSFWDWGTSLLTSNGAVIFYALLVVLVLGAVLFKDFSLLTTFASGLAGIALLCGVMSVLVVLVLASDQKEQDWRDFAAEHCKVIEKREGATTTGVGVSLKGQAGVFIGGEPDQTGYLCDDGVTYWKNE
>NZ_CP025462.1|WP_016947073.1|49700_50108_-|hypothetical-protein
MKGINQSNGNHLKFLYGVTSTDRLIQHEHADDFIDSCISNIGSIHKMSLTCYRAGGPLTELVLFYGSDKTFSITIGVGDVDVSMVNEDDIRISHKQITLPDTTDTLILVTRIARRSGLKPMLPEAEQFSTVLDFV
>NZ_CP025462.1|WP_016947072.1|50117_50513_-|hypothetical-protein
MAFIKGFLFFIIMVLLVYGVTGLTAKESIVFTAFGFGISAILCSFIGIMVVLVVTMCLFAFEELGALPRLFGAQIILIALWNLIFTVVLPDEKARTILGFDLYNISSYLLYGMTVLLGIGSVAMLFNKNNS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP020848	Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence	325868-325901	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP036336	Klebsiella pneumoniae strain BP327 plasmid pIncHIB, complete sequence	158946-158979	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP041093	Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed1, complete sequence	31450-31483	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP028791	Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence	30644-30677	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP039526	Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence	28113-28146	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP034681	Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence	28380-28413	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP050156	Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence	115769-115802	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP023723	Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence	11015-11048	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK413723	Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence	132619-132652	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK413721	Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence	132254-132287	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK191024	Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence	29401-29434	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP014776	Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence	57105-57138	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	28356-28389	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP008933	Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence	11037-11070	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NC_016980	Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence	240119-240152	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK413722	Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence	279449-279482	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP025462	Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence	42953-42986	0	1.0
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP034681	Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence	28441-28474	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP023723	Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence	11076-11109	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP014776	Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence	57166-57199	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MG288682	Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence	28417-28450	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK413722	Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence	279388-279421	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP034201	Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence	53165-53198	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP050380	Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence	332653-332686	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP024507	Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence	42060-42093	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP031372	Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence	144869-144902	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP040726	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence	300533-300566	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052310	Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-1, complete sequence	32497-32530	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018720	Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence	24631-24664	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018702	Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence	5074-5107	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052325	Klebsiella pneumoniae strain E16KP0032 plasmid pE16KP0032-1, complete sequence	30142-30175	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP015501	Klebsiella pneumoniae strain SKGH01 plasmid unnamed 1, complete sequence	7738-7771	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052558	Klebsiella pneumoniae strain A17KP0008 plasmid pA17KP0008-1, complete sequence	25478-25511	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052269	Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-1, complete sequence	33563-33596	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052233	Klebsiella pneumoniae strain E17KP0033 plasmid pE17KP0033-2, complete sequence	30385-30418	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052208	Klebsiella pneumoniae strain E17KP0085 plasmid pE17KP0085-1, complete sequence	32497-32530	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP026172	Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence	227539-227572	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP026186	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence	221242-221275	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP031580	Klebsiella pneumoniae strain N4b plasmid p1502320-3	7802-7835	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052327	Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence	30135-30168	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052539	Klebsiella pneumoniae strain B16KP0141 plasmid pB16KP0141-2, complete sequence	30138-30171	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP041935	Klebsiella pneumoniae strain KP14003 plasmid unnamed1, complete sequence	30080-30113	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052236	Klebsiella pneumoniae strain E17KP0029 plasmid pE17KP0029-1, complete sequence	168222-168255	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP043933	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-1, complete sequence	60573-60606	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052240	Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence	30135-30168	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	CP052242	Klebsiella pneumoniae strain E17KP0019 plasmid pE17KP0019-1, complete sequence	32497-32530	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018696	Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence	102211-102244	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018708	Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence	54729-54762	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MK262712	Klebsiella pneumoniae strain KP18-29 plasmid p18-29-MDR, complete sequence	48692-48725	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MG845200	Klebsiella oxytoca strain TJ11 plasmid pNDM-TJ11, complete sequence	130367-130400	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MG845201	Klebsiella pneumoniae strain TJ03 plasmid pNDM-TJ03, complete sequence	130451-130484	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP050068	Klebsiella aerogenes strain 035 plasmid p35, complete sequence	306091-306124	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP017986	Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence	149479-149512	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018714	Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence	8642-8675	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_LN824134	Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_A_Kpneumoniae_MS6671	17595-17628	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP031818	Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence	223922-223955	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP042866	Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence	139000-139033	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP026398	Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence	8236-8269	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018961	Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence	277823-277856	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	142518-142551	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018313	Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence	95728-95761	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP027156	Klebsiella pneumoniae strain AR_0363 plasmid unnamed4	128199-128232	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP044381	Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-1, complete sequence	243788-243821	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018687	Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence	117621-117654	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP018339	Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence	75943-75976	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	HG918041	Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence	100529-100562	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_MF150122	Klebsiella pneumoniae strain A64477 plasmid pKP64477b, complete sequence	85322-85355	1	0.971
NZ_CP025462_1	1.1\|42953\|34\|NZ_CP025462\|CRISPRCasFinder	42953-42986	34	NZ_CP032223	Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence	30109-30142	1	0.971

1. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP020848 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

2. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP036336 (Klebsiella pneumoniae strain BP327 plasmid pIncHIB, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

3. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP041093 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

4. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

5. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP039526 (Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

6. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

7. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP050156 (Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

8. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP023723 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

9. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK413723 (Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

10. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK413721 (Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

11. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK191024 (Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

12. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

13. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

14. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP008933 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

15. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NC_016980 (Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

16. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK413722 (Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

17. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP025462 (Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacaccaccgataacccccgcaca	Protospacer
**********************************

18. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

19. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP023723 (Klebsiella pneumoniae strain TVGHCRE225 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

20. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

21. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

22. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK413722 (Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

23. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP034201 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.*********************************

24. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP050380 (Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.*********************************

25. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP024507 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.*********************************

26. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP031372 (Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.*********************************

27. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP040726 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
gaccgtggacaacaccaccgataacccccgcaca	Protospacer
.*********************************

28. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052310 (Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

29. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018720 (Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

30. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018702 (Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

31. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052325 (Klebsiella pneumoniae strain E16KP0032 plasmid pE16KP0032-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

32. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP015501 (Klebsiella pneumoniae strain SKGH01 plasmid unnamed 1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

33. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052558 (Klebsiella pneumoniae strain A17KP0008 plasmid pA17KP0008-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

34. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052269 (Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

35. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052233 (Klebsiella pneumoniae strain E17KP0033 plasmid pE17KP0033-2, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

36. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052208 (Klebsiella pneumoniae strain E17KP0085 plasmid pE17KP0085-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

37. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP026172 (Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

38. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP026186 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

39. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP031580 (Klebsiella pneumoniae strain N4b plasmid p1502320-3) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

40. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052327 (Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

41. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052539 (Klebsiella pneumoniae strain B16KP0141 plasmid pB16KP0141-2, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

42. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP041935 (Klebsiella pneumoniae strain KP14003 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

43. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052236 (Klebsiella pneumoniae strain E17KP0029 plasmid pE17KP0029-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

44. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP043933 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

45. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052240 (Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

46. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to CP052242 (Klebsiella pneumoniae strain E17KP0019 plasmid pE17KP0019-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

47. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018696 (Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

48. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018708 (Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

49. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MK262712 (Klebsiella pneumoniae strain KP18-29 plasmid p18-29-MDR, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

50. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MG845200 (Klebsiella oxytoca strain TJ11 plasmid pNDM-TJ11, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

51. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MG845201 (Klebsiella pneumoniae strain TJ03 plasmid pNDM-TJ03, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

52. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP050068 (Klebsiella aerogenes strain 035 plasmid p35, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

53. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP017986 (Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

54. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018714 (Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

55. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_LN824134 (Klebsiella pneumoniae genome assembly MS6671.v1, plasmid : _Plasmid_A_Kpneumoniae_MS6671) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

56. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP031818 (Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

57. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP042866 (Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

58. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP026398 (Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

59. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018961 (Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

60. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

61. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018313 (Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

62. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP027156 (Klebsiella pneumoniae strain AR_0363 plasmid unnamed4) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

63. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP044381 (Klebsiella pneumoniae strain 2018S07-013 plasmid p2018S07-013-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

64. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018687 (Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

65. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP018339 (Klebsiella pneumoniae isolate Kp_Goe_154414 plasmid pKp_Goe_414-1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

66. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to HG918041 (Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

67. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_MF150122 (Klebsiella pneumoniae strain A64477 plasmid pKP64477b, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

68. spacer 1.1|42953|34|NZ_CP025462|CRISPRCasFinder matches to NZ_CP032223 (Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaccgtggacaacaccaccgataacccccgcaca	CRISPR spacer
aaccgtggacaacacgaccgataacccccgcaca	Protospacer
*************** ******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 24926

Clostridioides_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196338.1\|1974_2331_-	hypothetical protein	NA	NA	NA	NA
WP_004181922.1\|3219_3525_+	hypothetical protein	NA	NA	NA	NA
WP_004196345.1\|3575_7544_-	traG-like region family protein	NA	NA	NA	NA
WP_004181920.1\|7545_8901_-	hypothetical protein	NA	NA	NA	NA
WP_004196361.1\|8944_9982_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_004196331.1\|10347_10890_-	hypothetical protein	NA	NA	NA	NA
WP_032438005.1\|10906_11431_-	hypothetical protein	NA	NA	NA	NA
WP_071528223.1\|11623_12037_-	hypothetical protein	NA	NA	NA	NA
WP_004026319.1\|12976_13441_+	hypothetical protein	NA	NA	NA	NA
WP_004196318.1\|13440_14229_+	hypothetical protein	NA	NA	NA	NA
WP_032438004.1\|14242_17191_+	conjugal transfer protein TraI	NA	NA	NA	NA
WP_032438003.1\|17180_19307_+	conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_004181912.1\|19309_20407_+	hypothetical protein	NA	NA	NA	NA
WP_004181910.1\|20419_21094_+	DUF4400 domain-containing protein	NA	NA	NA	NA
WP_004181907.1\|24152_24926_+	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	5.1e-10	48.0

DBSCAN-SWA_2

30832 : 33278

uncultured_Caudovirales_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000323025.1\|30832_31120_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|31119_31359_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_100280317.1\|31383_31578_+	hypothetical protein	NA	NA	NA	NA
WP_085929673.1\|32110_33278_+\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	1.9e-178	96.1

DBSCAN-SWA_3

38641 : 41905

Cronobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004181894.1\|38641_39913_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.9e-140	58.3
WP_004181893.1\|39912_40335_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.3e-31	49.3
WP_004152765.1\|40420_41905_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5

DBSCAN-SWA_4

44922 : 46797

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016947078.1\|44922_46797_-	DEAD/DEAH box helicase	A0A127AW80	Bacillus_phage	5.2e-08	27.1

DBSCAN-SWA_5

50960 : 63265

Escherichia_phage(30.77%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065953872.1\|50960_52202_-	hypothetical protein	A0A2P9HXK7	Yersinia_phage	6.7e-12	28.9
WP_014386579.1\|53086_53542_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_004026394.1\|53829_54438_-	hypothetical protein	K4JV11	Caulobacter_phage	1.5e-25	42.2
WP_004026395.1\|54507_54957_-	hypothetical protein	A0A1I9KFG8	Aeromonas_phage	2.9e-18	45.2
WP_004026399.1\|55724_55997_-	hypothetical protein	I7B2L9	Escherichia_phage	2.5e-12	50.0
WP_016947069.1\|56266_56452_-	hypothetical protein	NA	NA	NA	NA
WP_099743439.1\|56451_57054_-	DUF551 domain-containing protein	A0A1V0E5M5	Salmonella_phage	2.1e-19	31.1
WP_016947068.1\|57137_57620_-	hypothetical protein	A0A077SLK5	Escherichia_phage	4.4e-12	58.3
WP_153236429.1\|57956_58292_-	hypothetical protein	J9Q804	Salmonella_phage	3.3e-14	51.4
WP_004197183.1\|58375_58591_-	hypothetical protein	NA	NA	NA	NA
WP_004197228.1\|58870_59257_-	hypothetical protein	H6WRY2	Salmonella_phage	3.7e-17	85.1
WP_101992385.1\|59673_60318_-	hypothetical protein	A0A0U4JEF1	Pseudomonas_phage	6.3e-06	38.3
WP_004026413.1\|61019_61208_-	hypothetical protein	NA	NA	NA	NA
WP_016947066.1\|61204_61702_-	hypothetical protein	A0A076G835	Escherichia_phage	6.3e-22	55.9
WP_004026415.1\|61794_62013_-	hypothetical protein	R9TRD3	Aeromonas_phage	4.4e-20	66.7
WP_004197205.1\|62178_62430_-	hypothetical protein	S5MQM0	Escherichia_phage	1.9e-22	76.7
WP_004026416.1\|62550_62865_-	hypothetical protein	NA	NA	NA	NA
WP_004026417.1\|62944_63265_-	hypothetical protein	J9Q750	Salmonella_phage	2.2e-28	50.9

DBSCAN-SWA_6

69970 : 72822

Salmonella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004181841.1\|69970_71059_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	4.4e-60	41.4
WP_014386487.1\|72030_72822_-	hypothetical protein	A0A219UQS0	Bacillus_phage	1.4e-10	32.5

DBSCAN-SWA_7

76558 : 84921

Burkholderia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004181829.1\|76558_76876_-	DUF3846 domain-containing protein	A0A2H4P7A4	Pseudomonas_phage	6.0e-10	46.5
WP_004181828.1\|76903_77152_-	hypothetical protein	NA	NA	NA	NA
WP_004026461.1\|77729_78932_+	type II restriction endonuclease	E5E3X4	Burkholderia_phage	1.1e-35	38.1
WP_004026463.1\|79021_80437_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.1e-106	50.9
WP_004026464.1\|80563_81307_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	1.8e-60	49.6
WP_004026465.1\|81303_81738_-	hypothetical protein	NA	NA	NA	NA
WP_004026466.1\|81770_82031_-	hypothetical protein	A0A0M3LSW2	Mannheimia_phage	5.9e-11	41.0
WP_101850617.1\|82284_82728_-	hypothetical protein	NA	NA	NA	NA
WP_004196726.1\|82958_83318_+	hypothetical protein	NA	NA	NA	NA
WP_048995652.1\|83502_83913_-	hypothetical protein	Q71TH9	Escherichia_phage	1.0e-41	60.0
WP_004181824.1\|84037_84352_+	hypothetical protein	NA	NA	NA	NA
WP_101850616.1\|84342_84921_-	HNH endonuclease	W0LI46	Edwardsiella_phage	1.2e-40	57.6

DBSCAN-SWA_8

97176 : 98424

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004181813.1\|97176_98424_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.4e-12	23.0

DBSCAN-SWA_9

106349 : 107528

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196657.1\|106349_107528_-	hypothetical protein	A0A1P8DTT7	Salmonella_phage	9.1e-19	33.0

DBSCAN-SWA_10

137576 : 175918

Enterobacteria_phage(25.0%)

transposase,integrase

attL 132382:132397|attR 180909:180924

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
132382:132397	attL	NA	NA	NA	NA
WP_040209642.1\|137576_138764_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	3.5e-143	78.0
WP_077257669.1\|138799_139228_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	1.6e-34	54.6
WP_040209639.1\|139801_141028_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.7e-153	76.9
WP_004181778.1\|141181_141466_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	4.7e-22	59.1
WP_004181777.1\|141455_141704_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_004181776.1\|141994_143794_+	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	1.8e-26	23.1
WP_101992392.1\|144127_145114_+	hypothetical protein	NA	NA	NA	NA
WP_004181774.1\|145258_145612_+	hypothetical protein	NA	NA	NA	NA
WP_004181772.1\|145673_146495_+	hypothetical protein	NA	NA	NA	NA
WP_004181771.1\|146522_147575_+	AAA domain-containing protein	NA	NA	NA	NA
WP_004026538.1\|147671_148748_+	DUF3150 domain-containing protein	NA	NA	NA	NA
WP_004181768.1\|152153_152384_+	hypothetical protein	NA	NA	NA	NA
WP_004181767.1\|152494_153739_+	topoisomerase	A0A0H5AWB1	Pseudomonas_phage	1.8e-09	25.5
WP_004181766.1\|153807_154347_+	hypothetical protein	NA	NA	NA	NA
WP_004181765.1\|154491_154710_+	hypothetical protein	NA	NA	NA	NA
WP_004181763.1\|155297_155540_+	hypothetical protein	NA	NA	NA	NA
WP_004181762.1\|155587_156052_+	hypothetical protein	NA	NA	NA	NA
WP_032409750.1\|156061_156469_+	hypothetical protein	NA	NA	NA	NA
WP_014386528.1\|156511_157471_+	hypothetical protein	NA	NA	NA	NA
WP_004181760.1\|157467_158226_+	hypothetical protein	NA	NA	NA	NA
WP_016946351.1\|158222_158552_+	hypothetical protein	NA	NA	NA	NA
WP_004026552.1\|158696_159014_+	hypothetical protein	NA	NA	NA	NA
WP_014386529.1\|159079_160216_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_101992394.1\|160301_161378_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_158295209.1\|161289_161793_-	maturase	NA	NA	NA	NA
WP_016946352.1\|162305_162560_+	transcriptional regulator	NA	NA	NA	NA
WP_014386530.1\|162645_163713_+	hypothetical protein	NA	NA	NA	NA
WP_136537796.1\|163931_164216_-	hypothetical protein	NA	NA	NA	NA
WP_101992395.1\|165112_165997_-	replication initiation protein	J9Q7H0	Salmonella_phage	7.5e-50	42.8
WP_000429836.1\|167996_168431_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|168502_168853_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|168866_169142_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|169177_169600_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_001277456.1\|171365_171728_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|171724_171961_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|171957_172665_+	EAL domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|174055_174760_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_101992396.1\|174871_175918_+\|transposase	IS481 family transposase	NA	NA	NA	NA
180909:180924	attR	NA	NA	NA	NA

DBSCAN-SWA_11

179197 : 205616

Escherichia_phage(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001389365.1\|179197_179962_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_000130000.1\|180188_180494_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000184001.1\|180504_181710_-	chromate efflux transporter	NA	NA	NA	NA
WP_000427619.1\|181937_182942_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000027057.1\|183467_184328_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000971921.1\|185148_186519_-\|transposase	IS1182-like element ISCfr1 family transposase	NA	NA	NA	NA
WP_000080861.1\|186633_187770_-	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_001330846.1\|187820_188066_-	hypothetical protein	NA	NA	NA	NA
WP_000951934.1\|188071_188263_+	hypothetical protein	NA	NA	NA	NA
WP_000587837.1\|188744_189287_-	AAA family ATPase	NA	NA	NA	NA
WP_000557454.1\|189299_190160_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_001067855.1\|190392_191097_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002903955.1\|192730_193633_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_001067855.1\|195670_196375_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004144375.1\|198082_198943_-	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	9.0e-08	21.7
WP_077274495.1\|199784_202748_-\|transposase	Tn3 family transposase	A0A125RQ78	Bacillus_phage	5.1e-50	22.7
WP_004210220.1\|202761_203289_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004210218.1\|203401_204415_+	NAD(P)-dependent alcohol dehydrogenase	M1PHA2	Moumouvirus	5.8e-06	26.0
WP_004225018.1\|204620_205616_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	3.1e-20	28.7

DBSCAN-SWA_12

221125 : 221386

Erwinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004213925.1\|221125_221386_-	DUF1471 domain-containing protein	A0A1B2IE60	Erwinia_phage	1.1e-06	51.0

DBSCAN-SWA_13

233130 : 233640

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004145290.1\|233130_233640_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.8e-19	41.9

DBSCAN-SWA_14

238535 : 241737

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004214541.1\|238535_239465_+	hypothetical protein	A0A140B3P3	Vibrio_phage	1.5e-11	25.2
WP_004214540.1\|239481_240306_-	DUF1460 domain-containing protein	NA	NA	NA	NA
WP_011251272.1\|240735_241737_+	TGS domain-containing protein	A0A2K9L6B6	Tupanvirus	9.7e-54	41.5

DBSCAN-SWA_15

249498 : 250983

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004194318.1\|249498_250983_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-29	34.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP025463

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP025461

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP025462

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection