CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	1 crisprs	cas14j,DEDDh	0	2	2	0
NZ_CP023810	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.3, complete sequence	0 crisprs	cas14j	0	0	0	0
NZ_CP023812	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.5, complete sequence	0 crisprs	NA	0	0	2	0
NZ_CP023811	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.4, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP023808	Enterococcus faecium strain Efaecium_ER04526.3A chromosome, complete genome	2 crisprs	RT,DEDDh,cas2,DinG,cas3,csa3,cas14j	3	3	16	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023809_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023809_1

430-557

TypeV

Consensus_repeat	Method
TCAGAGGGTATGAAAATCATACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023809_1

>merge|NZ_CP023809|1|430-557|CRISPRCasFinder
TCAGAGGGTATGAAAATCATACCCACCCTCGACGAAAAATCAGACGCTGAATCCCTTGGGGCTCAAGAGGGTATGAAAATCATACCGTGCCAAAACGTTGATAAATCAGAGGGTATGAAAATCATACC

>NZ_CP023809|1|1|430-557|CRISPRCasFinder
TCAGAGGGTATGAAAATCATACC	CACCCTCGACGAAAAATCAGACGCTGAATCCCTTGGGGCT
CAAGAGGGTATGAAAATCATACC	GTGCCAAAACGTTGATAAA
TCAGAGGGTATGAAAATCATACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023809.1\|WP_002303311.1\|11402_11996_+\|abortive-infection-protein	unknown	unknown	gnl\|CDD\|379128
NZ_CP023809.1\|WP_002347152.1\|7486_8947_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP023809.1\|WP_002323647.1\|1864_2197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023809.1\|WP_002305772.1\|8957_11162_+\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078
NZ_CP023809.1\|WP_002297404.1\|3393_4644_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_CP023809.1\|WP_002321302.1\|12910_13384_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|180915
NZ_CP023809.1\|WP_002303312.1\|12008_12908_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP023809.1\|WP_002321303.1\|13749_14010_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023809.1\|WP_002295674.1\|2815_3157_+\|DUF5406-domain-containing-protein	unknown	unknown	gnl\|CDD\|379975
NZ_CP023809.1\|WP_002305801.1\|5053_7426_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023809.1\|WP_002303311.1\|11402_11996_+\|abortive-infection-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.00819e-09
NZ_CP023809.1\|WP_002347152.1\|7486_8947_+\|hypothetical-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	0.000530207
NZ_CP023809.1\|WP_002305772.1\|8957_11162_+\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP023809.1\|WP_002295674.1\|2815_3157_+\|DUF5406-domain-containing-protein	gnl\|CDD\|379975	pfam17400, DUF5406, Family of unknown function (DUF5406). This is a family of unknown function found in Bacteria.	2.01693e-48
NZ_CP023809.1\|WP_002321302.1\|12910_13384_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|180915	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional.	1.38283e-70
NZ_CP023809.1\|WP_002303312.1\|12008_12908_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	8.76192e-35
NZ_CP023809.1\|WP_002297404.1\|3393_4644_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	8.21771e-29

>NZ_CP023809.1|WP_002323647.1|1864_2197_+|hypothetical-protein
MSYTGILSLKDICHYGKRCTATEKITKKLSTGQSKTVVQCKKYIIQKDKVSEEMIYYIGKQKQIILKDPIPLKELYPTIKHVYDQNGVLIGRRKNGVLRCTAKGMGRLIG
>NZ_CP023809.1|WP_002295674.1|2815_3157_+|DUF5406-domain-containing-protein
MKNYDPNIRLGTHTIKVSFQRWDYKGFVTFRRGGNCKGLDVLALDEDDLYDQTLTDNPIGFGLLPEDDEGNEWFKMTLMNDNGDELSVEDTWSYLSDYIVSFEIIEFVADKEE
>NZ_CP023809.1|WP_002297404.1|3393_4644_-|IS110-family-transposase
MKLFVGIDVSSEKLDVCFLTDDNQLSILSEISVANDIEGASFIRETILEFNDSYHFDQIVIGMESTSMYSFHPSMFFHEDEKLKKLNTLVTIENPFRVKQFSRMFDENKTDRNDALRIADFLRIQRFTTSPIKEEKYMALQRLTRTRYQLIKQLIRTKQHFLENLTYKCNTLAREMRDESTSLFSATLISLMTEDFTLDELAELPLEAFCDLLQEKGKGRFKQPEKIAKAIQRAITMSYRLGALAQESINVVLSVLVREIRALEKNIKELDKAIEQVIVVIPEYQCLTSIPGVGKVYAAGLIAEIGQIERFEDQTKLAKYAGLSWKVNQSGNYQSQNTPLTKQGNRYFRYYLVEAANSVKNYLPEYKAFYQSKYKEVPKHQHKRALVLTARKFTRLVDTLLRKHQLYTPPRSVIEK
>NZ_CP023809.1|WP_002305801.1|5053_7426_+|hypothetical-protein
MAEEKEPLDNSRLGKSKRKLVRLQNELNEQIEKMFEHQRKTNGQPMNDKRNGHSWFRQQERLENKVHSLREEIKQQEKQVEKLERQEELKEMGYNKYGGLDMTIENIPRIKEEIERFEKGESTFSAATIRKYQRKLETLEQLKERSEKGKENLLPEVQAIIDSGRVTQWKKNPTIYFLKDYRKVALELNENGGFEESKKYQATSEEEKAAVRELLEEAAPTDSLKEKENDHFYRVEFNENDPEKGLKSYGGEIVTLELIDQLKTLDNQYAAEAGYYKFYFEEVKNGEVVDQIRMDLGDGVNSNQPIYLELAKLCEQVPEKEQKQTVKNEPVSKEQMQSKETKTKQKGYQKRTAEEIKQEVKSLSQQALDAVKKHTHSPEDVKELLNFMSRFPERSFRNQLLIEEQFPGATACLGRAALKKEGIYIKKGEQGNKIFVRKTVKGFYEKGRGFVRETEATPEDKKRIESGQIEVIKKPYYTIEKVFDITQTQLKPEDYPKIFPNRVFDFQLDKKGQSELQAGIQAVANNIGIQIRDMTESEVYQRELGQARGAYVRNEFTGEEEIVMNTRNTPTQHLATSIHELAHARMHKFSELDTATKELQAEMTSYIVCKHFGMDTSEKAIPYIAAWTKNGQTLDDKEAAERGKIMNDVSRVANEFIQTISNEINQYREREPEIQPAEVKQEHKNTVETAENKNIVPVGSLWIDKKDGKVMEEDTGRTLHLKDAAFIEDPQHNQVILKGKSYGKEIQTALPSEEFALGNPFRFSLETVSEVAKRKNEIYYEQQLSQKERV
>NZ_CP023809.1|WP_002347152.1|7486_8947_+|hypothetical-protein
MTEKKMSLIDRCKQIDIVDFARNNGMAVVNKGRDYRLEDHDSFVFDRRKQRFYWNSQNISGDIIELAKLFFIDKEIQDSKQQFKAATDFILKNEDKTERVENLHFETEKYKDHPVDYQPLTEKGRNYLKEERKLPEWLIDYAEKEGLIAELKPKHERQNFLVRDDRLDHAVAFLWKDPQTNETVGASYQGTFIDYERFGERGTYKHIDKNSTANHGFNLKIGDPKQLKFFESSIDLLSYAALNRDQLNDTWLVSMEGLKHHVISHYFGEAVSELRKKQAFPQSIEICVDNDRAGHIFYEKEQLMGAVDPFTNQKVRCERGIANDWQVPKEYKVIYEEVAKEEKITPEAIMAIHKTENNLQLTNQLVSAHKVNASFGQQLSVNDSIEAINLKDICREVAKELKACERVDGTYDFDRFYQEKGDINAQILFSYKAEQYYKGYKNHEHEFVPEVKKDWNDQLKHEIYQQEIRKQKRAMLFQQGRQQERE
>NZ_CP023809.1|WP_002305772.1|8957_11162_+|type-IA-DNA-topoisomerase
MKTVILAEKPSQAKAYADSFSKATRKDGYFEIQDRLFSGETVITYGFGHLVELDSPDMYDENWKQWSLEHLPIFPTHYHYHVPKDKKKQFKVVKQQLQSADTIIIATDSDREGELIAWTIIQQAGADHGKIFKRLWINSLEKEAIYQGFQQLRDAEETYPKFEEAQARQIADWLIGMNGSPLYSLLLQQKGIPGSFSLGRVQTPTLYMIYQLQEKIRNFQKEPYFEGKAQVIAQNGAFDAKLDPNETQATQEAFEDYLKEKGVQLGKQPGTIHQVETEKKSAASPRLFSLSSLQSKMNQLMKASAKDTLEAMQGLYEGKYLSYPRTDTPYITEGEYAYLLDHLDEYKHFLKAEAIPTPIHTPNSRYVNNKKVQEHYAIIPTKTVMTAAAFEQLSPLQQAIYEQVLKTTVAMFAEKYTYEETTILTQVQQLQLKTVGKVPVDLGWKKLFGKESDRKEKEEEPLLPKVTKGEAVTVDLQVLEKETKPPQPYTEGTLITAMKTAGKTVDSEEAQSILKEVEGIGTEATRANIIETLKQKEYIKVEKNKLVVTNKGILLCQAVEKEPLLTSAEMTAKWESYLLKIGEQKGTQATFLANIQKFVSHLLEVVPGQIQSTDFGSTLQEVKAASEKQEATRHLGVCPKCREQEVLLYQNVAACTSEACDFKLWTTIAKKKLTATQLKEIIQNGRTSQSVRGLKGQKGSFEATIVLKEDFTTGFEFSEKKKTNYKKRTRRTTK
>NZ_CP023809.1|WP_002303311.1|11402_11996_+|abortive-infection-protein
MQDKLKELLAIRDGNLSMKEARKFGIAATTVQRLVNQGKLIKVDRGYYVEDGHGIDDLFWLQQRFSRGIFSHETTLDIYQLSTNMPKFIHLTFPHGYNVDRSITKEQQLQFHFVKKEVYELGKVEGTSFQGNPITMYDKERTLCDIWNPRYEFEYEMKLEALKEYMEDPLRDPSKLRDYMTKLHVEKEMKYHMQSLY
>NZ_CP023809.1|WP_002303312.1|12008_12908_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MTPTQFAAKTRNLAKSTGLNAQLVQRHFMMDRLIEQISESKYKNDFILKGGFLLGSKYGIDRRTTIDIDTTFRNSKLTEEKLKSIFNDLTRKPTKEGIVFSIQGMKETREADFYPGFQIKLVANLEKVRVPFKMDVTTGDSIYPEVDTHYHQLMFEDKKVEIPAYPTEQIIAEKLSATFSFGTDNSRAKDYYDLFTIPKLENIDTKELYKSVRNTFTKRGDTKPLSFYYEREMDKIRGNDYLEKQWEKYRSVNTFANSISFTDTVNEIDHLMKSVIKIENQERKRQFKRSQQMNQEMER
>NZ_CP023809.1|WP_002321302.1|12910_13384_+|single-stranded-DNA-binding-protein
MINNVTLVGRLTKDPDLRYTASGTAVATFTLAVNRNFANQNGNREADFINCVIWRKPAETMATLAKKGGLIGVVGRIQTRTYDNQQGQRVYVTEVVADNFQLLESKAATESRAHADQSTTSPSPTTFEQRDTNNGLDASQNPFGGQSIDISDDDLPF
>NZ_CP023809.1|WP_002321303.1|13749_14010_+|hypothetical-protein
MNKYVGLLDKIRVIKTQPLLVRFTLQTIHESINCVVADIEIIDKLLIMDDGKYNIAVTGHFNKRNQLVIASMYVRNPDQFTRLMGI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP011282	Enterococcus faecium strain E39 plasmid p1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	221215-221254	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	LT603679	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2	452-491	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	244126-244165	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	27883-27922	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP020485	Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence	96547-96586	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	454-493	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP012385	Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence	95091-95130	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	358204-358243	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	119936-119975	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP018073	Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence	111370-111409	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027502	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135298	Enterococcus faecium isolate E7429 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135288	Enterococcus faecium isolate E7199 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135333	Enterococcus faecium isolate E7471 plasmid 3	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	126934-126973	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135279	Enterococcus faecium isolate E6975 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135255	Enterococcus faecium isolate E7098 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135259	Enterococcus faecium isolate E4457 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040905	Enterococcus faecium strain N56454 plasmid unnamed, complete sequence	153620-153659	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	129211-129250	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	71269-71308	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	249117-249156	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP017798	Enterococcus faecium strain E243 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135436	Enterococcus faecium isolate E8691 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135180	Enterococcus faecium isolate E0595 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135489	Enterococcus faecium isolate E8414 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135365	Enterococcus faecium isolate E8195 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135415	Enterococcus faecium isolate E8328 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135395	Enterococcus faecium isolate E8290 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NC_021987	Enterococcus faecium Aus0085 plasmid p1, complete sequence	107198-107237	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135345	Enterococcus faecium isolate E8202 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135325	Enterococcus faecium isolate E7654 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135409	Enterococcus faecium isolate E8284 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135352	Enterococcus faecium isolate E8014 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP050649	Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE	91401-91440	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP050651	Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT	102425-102464	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135385	Enterococcus faecium isolate E7933 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135318	Enterococcus faecium isolate E7663 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135373	Enterococcus faecium isolate E8172 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP006031	Enterococcus faecium T110 plasmid pEFT110, complete sequence	1397-1436	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	60361-60400	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR132068	Enterococcus faecium isolate E0139 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	97676-97715	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP033042	Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence	52636-52675	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	102650-102689	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP014530	Enterococcus faecium strain E745 plasmid pl1, complete sequence	200630-200669	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	56542-56581	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	65332-65371	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040704	Enterococcus faecium strain HOU503 plasmid p1, complete sequence	67328-67367	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP044275	Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP017793	Enterococcus faecium strain E240 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	14571-14610	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023790	Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023800	Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	178898-178937	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	33081-33120	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	105709-105748	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	39886-39925	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135192	Enterococcus faecium isolate E4438 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP037956	Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_1, complete sequence	35165-35204	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135308	Enterococcus faecium isolate E7240 plasmid 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP040237	Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP018066	Enterococcus faecium strain E1 plasmid pE1_230, complete sequence	225612-225651	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP033207	Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence	92045-92084	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP018129	Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence	17088-17127	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023805	Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	86167-86206	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	61653-61692	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	5084-5123	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	177278-177317	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	244126-244165	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	LR135186	Enterococcus faecium isolate E4413 genome assembly, plasmid: 2	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP012461	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence	192112-192151	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023795	Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP023781	Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence	453-492	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LT598664	Enterococcus faecium isolate Ef_aus00233 plasmid 2	168262-168301	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	221173-221191	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	51712-51730	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027401	Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence	109405-109423	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	358162-358180	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	119894-119912	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040905	Enterococcus faecium strain N56454 plasmid unnamed, complete sequence	153578-153596	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	129169-129187	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	249075-249093	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP050649	Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE	91359-91377	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP050651	Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT	102383-102401	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	60319-60337	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	97634-97652	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP033042	Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence	52594-52612	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	102608-102626	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	56500-56518	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	65290-65308	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	14529-14547	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	33039-33057	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	39844-39862	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP033207	Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence	92003-92021	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP018129	Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence	17046-17064	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	47586-47604	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP012461	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence	192070-192088	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LT598664	Enterococcus faecium isolate Ef_aus00233 plasmid 2	168220-168238	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP011282	Enterococcus faecium strain E39 plasmid p1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	LT603679	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2	515-533	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	244189-244207	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	27946-27964	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP020485	Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence	96610-96628	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	517-535	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP018073	Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence	111433-111451	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027502	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135298	Enterococcus faecium isolate E7429 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135288	Enterococcus faecium isolate E7199 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135333	Enterococcus faecium isolate E7471 plasmid 3	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	126997-127015	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135279	Enterococcus faecium isolate E6975 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135255	Enterococcus faecium isolate E7098 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135259	Enterococcus faecium isolate E4457 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	71332-71350	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP017798	Enterococcus faecium strain E243 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135436	Enterococcus faecium isolate E8691 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135175	Enterococcus faecium isolate E4402 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135489	Enterococcus faecium isolate E8414 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135365	Enterococcus faecium isolate E8195 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135415	Enterococcus faecium isolate E8328 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135395	Enterococcus faecium isolate E8290 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NC_021987	Enterococcus faecium Aus0085 plasmid p1, complete sequence	107261-107279	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135345	Enterococcus faecium isolate E8202 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135325	Enterococcus faecium isolate E7654 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135409	Enterococcus faecium isolate E8284 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135352	Enterococcus faecium isolate E8014 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135385	Enterococcus faecium isolate E7933 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135318	Enterococcus faecium isolate E7663 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135373	Enterococcus faecium isolate E8172 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP006031	Enterococcus faecium T110 plasmid pEFT110, complete sequence	1460-1478	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP045013	Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP014530	Enterococcus faecium strain E745 plasmid pl1, complete sequence	200693-200711	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040704	Enterococcus faecium strain HOU503 plasmid p1, complete sequence	67391-67409	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040873	Enterococcus faecium strain DB-1 plasmid punnamed1	40046-40064	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040876	Enterococcus faecium strain DB-1 plasmid punnamed2	2896-2914	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP044275	Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP017793	Enterococcus faecium strain E240 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023790	Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023800	Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	178961-178979	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR134096	Enterococcus faecium isolate E1334 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	105772-105790	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135192	Enterococcus faecium isolate E4438 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_LR135308	Enterococcus faecium isolate E7240 plasmid 2	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP040237	Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP018066	Enterococcus faecium strain E1 plasmid pE1_230, complete sequence	225675-225693	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023805	Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	86230-86248	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	61716-61734	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	5147-5165	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	177341-177359	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	244189-244207	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023795	Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.2\|516\|19\|NZ_CP023809\|CRISPRCasFinder	516-534	19	NZ_CP023781	Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence	516-534	0	1.0
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP027401	Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence	109447-109486	1	0.975
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR135175	Enterococcus faecium isolate E4402 plasmid 2	453-492	1	0.975
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_LR134096	Enterococcus faecium isolate E1334 plasmid 2	453-492	1	0.975
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	47628-47667	1	0.975
NZ_CP023809_1	1.1\|453\|40\|NZ_CP023809\|CRISPRCasFinder	453-492	40	NZ_CP012367	Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence	3358-3397	5	0.875

1. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP011282 (Enterococcus faecium strain E39 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

2. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

3. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to LT603679 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

4. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

5. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

6. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

7. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP020485 (Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

8. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

9. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP012385 (Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

10. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

11. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

12. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018073 (Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

13. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

14. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

15. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

16. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

17. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135298 (Enterococcus faecium isolate E7429 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

18. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135288 (Enterococcus faecium isolate E7199 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

19. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135333 (Enterococcus faecium isolate E7471 plasmid 3) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

20. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

21. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

22. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

23. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

24. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027513 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

25. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

26. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

27. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

28. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

29. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135255 (Enterococcus faecium isolate E7098 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

30. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

31. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

32. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135259 (Enterococcus faecium isolate E4457 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

33. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

34. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040905 (Enterococcus faecium strain N56454 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

35. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

36. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

37. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

38. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP017798 (Enterococcus faecium strain E243 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

39. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

40. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

41. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

42. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

43. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

44. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135180 (Enterococcus faecium isolate E0595 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

45. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

46. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135489 (Enterococcus faecium isolate E8414 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

47. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135365 (Enterococcus faecium isolate E8195 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

48. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

49. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135415 (Enterococcus faecium isolate E8328 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

50. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135395 (Enterococcus faecium isolate E8290 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

51. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NC_021987 (Enterococcus faecium Aus0085 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

52. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135345 (Enterococcus faecium isolate E8202 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

53. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135325 (Enterococcus faecium isolate E7654 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

54. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

55. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135409 (Enterococcus faecium isolate E8284 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

56. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135352 (Enterococcus faecium isolate E8014 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

57. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP050649 (Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

58. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP050651 (Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

59. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135385 (Enterococcus faecium isolate E7933 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

60. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

61. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135318 (Enterococcus faecium isolate E7663 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

62. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

63. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135373 (Enterococcus faecium isolate E8172 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

64. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP006031 (Enterococcus faecium T110 plasmid pEFT110, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

65. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

66. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR132068 (Enterococcus faecium isolate E0139 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

67. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

68. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LN999988 (Enterococcus faecium isolate EFE11651 plasmid II, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

69. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP033042 (Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

70. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

71. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

72. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP014530 (Enterococcus faecium strain E745 plasmid pl1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

73. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

74. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

75. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

76. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

77. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040704 (Enterococcus faecium strain HOU503 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

78. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP044275 (Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

79. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP017793 (Enterococcus faecium strain E240 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

80. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

81. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

82. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023790 (Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

83. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023800 (Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

84. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

85. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

86. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

87. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

88. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

89. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

90. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

91. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

92. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135192 (Enterococcus faecium isolate E4438 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

93. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

94. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP037956 (Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

95. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

96. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

97. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018066 (Enterococcus faecium strain E1 plasmid pE1_230, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

98. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023809 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

99. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP033207 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

100. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018129 (Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

101. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023805 (Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

102. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

103. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

104. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

105. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

106. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP016164 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

107. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

108. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to LR135186 (Enterococcus faecium isolate E4413 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

109. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP012461 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

110. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023795 (Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

111. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

112. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023781 (Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

113. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LT598664 (Enterococcus faecium isolate Ef_aus00233 plasmid 2) position: , mismatch: 0, identity: 1.0

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
****************************************

114. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

115. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

116. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027401 (Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

117. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

118. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

119. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040905 (Enterococcus faecium strain N56454 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

120. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

121. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

122. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP050649 (Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

123. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP050651 (Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

124. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

125. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LN999988 (Enterococcus faecium isolate EFE11651 plasmid II, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

126. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP033042 (Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

127. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

128. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

129. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

130. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

131. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

132. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

133. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP033207 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

134. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018129 (Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

135. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

136. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP012461 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

137. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LT598664 (Enterococcus faecium isolate Ef_aus00233 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

138. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP011282 (Enterococcus faecium strain E39 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

139. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to LT603679 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

140. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

141. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

142. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

143. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP020485 (Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

144. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

145. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018073 (Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

146. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

147. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

148. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

149. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

150. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135298 (Enterococcus faecium isolate E7429 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

151. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135288 (Enterococcus faecium isolate E7199 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

152. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135333 (Enterococcus faecium isolate E7471 plasmid 3) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

153. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

154. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

155. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

156. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

157. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027513 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

158. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

159. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

160. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

161. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

162. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135255 (Enterococcus faecium isolate E7098 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

163. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

164. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

165. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135259 (Enterococcus faecium isolate E4457 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

166. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

167. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

168. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP017798 (Enterococcus faecium strain E243 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

169. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

170. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

171. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

172. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

173. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

174. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135175 (Enterococcus faecium isolate E4402 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

175. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

176. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135489 (Enterococcus faecium isolate E8414 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

177. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135365 (Enterococcus faecium isolate E8195 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

178. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

179. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135415 (Enterococcus faecium isolate E8328 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

180. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135395 (Enterococcus faecium isolate E8290 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

181. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NC_021987 (Enterococcus faecium Aus0085 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

182. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135345 (Enterococcus faecium isolate E8202 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

183. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135325 (Enterococcus faecium isolate E7654 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

184. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

185. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135409 (Enterococcus faecium isolate E8284 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

186. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135352 (Enterococcus faecium isolate E8014 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

187. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135385 (Enterococcus faecium isolate E7933 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

188. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

189. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135318 (Enterococcus faecium isolate E7663 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

190. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

191. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135373 (Enterococcus faecium isolate E8172 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

192. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP006031 (Enterococcus faecium T110 plasmid pEFT110, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

193. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

194. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP045013 (Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

195. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

196. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP014530 (Enterococcus faecium strain E745 plasmid pl1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

197. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

198. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

199. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040704 (Enterococcus faecium strain HOU503 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

200. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040873 (Enterococcus faecium strain DB-1 plasmid punnamed1) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

201. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

202. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP044275 (Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

203. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP017793 (Enterococcus faecium strain E240 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

204. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

205. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023790 (Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

206. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023800 (Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

207. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

208. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

209. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

210. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR134096 (Enterococcus faecium isolate E1334 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

211. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

212. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

213. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

214. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135192 (Enterococcus faecium isolate E4438 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

215. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

216. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

217. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

218. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018066 (Enterococcus faecium strain E1 plasmid pE1_230, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

219. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023809 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

220. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023805 (Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

221. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

222. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

223. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

224. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

225. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP016164 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

226. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

227. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023795 (Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

228. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

229. spacer 1.2|516|19|NZ_CP023809|CRISPRCasFinder matches to NZ_CP023781 (Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgccaaaacgttgataaa	CRISPR spacer
gtgccaaaacgttgataaa	Protospacer
*******************

230. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP027401 (Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.975

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcaggcgctgaatcccttggggct	Protospacer
********************.*******************

231. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR135175 (Enterococcus faecium isolate E4402 plasmid 2) position: , mismatch: 1, identity: 0.975

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcaggcgctgaatcccttggggct	Protospacer
********************.*******************

232. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_LR134096 (Enterococcus faecium isolate E1334 plasmid 2) position: , mismatch: 1, identity: 0.975

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcaggcgctgaatcccttggggct	Protospacer
********************.*******************

233. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 1, identity: 0.975

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
catcctcgacgaaaaatcagacgctgaatcccttggggct	Protospacer
**.*************************************

234. spacer 1.1|453|40|NZ_CP023809|CRISPRCasFinder matches to NZ_CP012367 (Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence) position: , mismatch: 5, identity: 0.875

caccctcgacgaaaaatcagacgctgaatcccttggggct	CRISPR spacer
caccctcgacgaaaaatcagacgctgaatccttggggctc	Protospacer
*******************************.* *** ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12910 : 20581

Temperate_phage(16.67%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002321302.1\|12910_13384_+	single-stranded DNA-binding protein	Q938M7	Temperate_phage	5.6e-44	62.0
WP_002321303.1\|13749_14010_+	hypothetical protein	A0A0S2MYI8	Enterococcus_phage	3.4e-11	51.4
WP_002296239.1\|14454_14661_+	hypothetical protein	NA	NA	NA	NA
WP_002305766.1\|14660_14912_+	hypothetical protein	NA	NA	NA	NA
WP_002305764.1\|14927_15344_+	hypothetical protein	NA	NA	NA	NA
WP_002348912.1\|15325_15598_+	hypothetical protein	NA	NA	NA	NA
WP_002305759.1\|15764_16166_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.4e-24	43.1
WP_002305757.1\|16177_17323_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	D9J0Y9	Brochothrix_phage	7.7e-164	74.6
WP_002287514.1\|17560_17824_+	hypothetical protein	NA	NA	NA	NA
WP_002321032.1\|17817_18168_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_002318230.1\|18191_18806_-	recombinase family protein	M9Q1K0	Clostridium_phage	2.6e-17	31.9
WP_002348911.1\|19255_20581_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.2e-99	43.6

DBSCAN-SWA_2

36063 : 147838

Streptococcus_phage(20.59%)

integrase,protease,transposase,holin,bacteriocin

attL 74075:74134|attR 126040:127377

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002300034.1\|36063_38121_-\|protease	serine protease	NA	NA	NA	NA
WP_002300033.1\|38265_38457_-	hypothetical protein	NA	NA	NA	NA
WP_002300032.1\|38644_39100_+	hypothetical protein	NA	NA	NA	NA
WP_002305782.1\|39096_39339_+	DUF5415 family protein	NA	NA	NA	NA
WP_002302862.1\|39356_39659_+	hypothetical protein	NA	NA	NA	NA
WP_002302860.1\|39727_41782_+	hypothetical protein	NA	NA	NA	NA
WP_002302859.1\|41781_44394_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_002302858.1\|44390_46769_+	hypothetical protein	NA	NA	NA	NA
WP_002302857.1\|46829_47372_+	hypothetical protein	NA	NA	NA	NA
WP_002302856.1\|47449_47782_+	hypothetical protein	NA	NA	NA	NA
WP_002302855.1\|47782_48376_+	hypothetical protein	NA	NA	NA	NA
WP_002302854.1\|48397_50422_+	hypothetical protein	NA	NA	NA	NA
WP_002302853.1\|50421_51621_+	peptidoglycan DD-metalloendopeptidase family protein	Q6SEC2	Lactobacillus_prophage	2.5e-32	38.1
WP_002302852.1\|51636_52281_+	hypothetical protein	NA	NA	NA	NA
WP_002302851.1\|52291_53098_+	hypothetical protein	NA	NA	NA	NA
WP_033582323.1\|53508_54444_+	DUF4199 domain-containing protein	NA	NA	NA	NA
WP_002305788.1\|54487_54757_+	hypothetical protein	NA	NA	NA	NA
WP_002302849.1\|55032_55308_+	hypothetical protein	NA	NA	NA	NA
WP_002302844.1\|55349_55772_+	hypothetical protein	NA	NA	NA	NA
WP_033582318.1\|55791_57384_+	hypothetical protein	NA	NA	NA	NA
WP_002302842.1\|57404_57740_+	hypothetical protein	NA	NA	NA	NA
WP_002302840.1\|57885_58080_+	hypothetical protein	NA	NA	NA	NA
WP_002297404.1\|58215_59466_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002305801.1\|59875_62248_+	hypothetical protein	B5SP25	Lactococcus_phage	3.4e-12	29.7
WP_002303486.1\|63787_65797_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	1.6e-111	52.6
WP_002303484.1\|66142_66739_+	transcriptional regulator	NA	NA	NA	NA
WP_002303483.1\|66751_67651_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_002301801.1\|67653_67785_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.3e-11	83.3
WP_002305808.1\|67806_68139_+	single-stranded DNA-binding protein	W6LM61	Streptococcus_phage	6.1e-21	53.2
WP_002303482.1\|68183_68417_+	hypothetical protein	NA	NA	NA	NA
WP_002295624.1\|68575_68698_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_002305809.1\|68887_69112_+	hypothetical protein	NA	NA	NA	NA
WP_002305810.1\|69554_69761_+	hypothetical protein	NA	NA	NA	NA
WP_002300797.1\|69760_70012_+	hypothetical protein	NA	NA	NA	NA
WP_002300801.1\|70192_70465_+	hypothetical protein	NA	NA	NA	NA
WP_002300804.1\|70909_71089_+	hypothetical protein	NA	NA	NA	NA
WP_002311569.1\|71147_71504_+	hypothetical protein	NA	NA	NA	NA
WP_000222572.1\|72472_73426_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.7e-34	35.8
WP_002300807.1\|73546_73810_+\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
74075:74134	attL	NA	NA	NA	NA
WP_000997695.1\|74181_75360_+\|transposase	IS256-like element ISEf1 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-30	25.6
WP_002332708.1\|75891_76800_+\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA
WP_002300835.1\|78744_79200_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002300836.1\|79213_80542_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_002300838.1\|80575_80860_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002300840.1\|80861_81377_+	YjbQ family protein	NA	NA	NA	NA
WP_002300841.1\|81392_82055_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_002300842.1\|82061_82634_+	SIS domain-containing protein	NA	NA	NA	NA
WP_002303202.1\|82805_84353_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-44	28.9
WP_002287659.1\|84454_84808_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.7e-17	38.7
WP_002285758.1\|84797_84992_-	hypothetical protein	NA	NA	NA	NA
WP_002300843.1\|85173_86694_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.1e-48	31.6
WP_002305884.1\|86936_87122_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_002300846.1\|87105_87288_-	hypothetical protein	NA	NA	NA	NA
WP_002301839.1\|88241_88841_+\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	1.3e-29	36.1
WP_002322465.1\|88904_89504_+	hypothetical protein	NA	NA	NA	NA
WP_002305879.1\|90519_91392_-	ROK family protein	NA	NA	NA	NA
WP_000195429.1\|91634_92807_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_002303302.1\|92987_94934_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA
WP_002302078.1\|95118_96558_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	1.4e-16	25.1
WP_002302077.1\|96559_97522_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.3e-20	25.8
WP_086953894.1\|97691_99118_-\|transposase	IS3-like element ISEfa10 family transposase	A0A1B1P773	Bacillus_phage	2.3e-48	40.2
WP_002301718.1\|99360_99816_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	1.3e-13	31.6
WP_002289255.1\|100401_100632_-	resolvase	NA	NA	NA	NA
WP_002289254.1\|100861_101680_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002289253.1\|101840_102530_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_002289252.1\|102543_104046_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_002300328.1\|104058_104535_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_086956687.1\|105032_106195_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.6e-79	51.3
WP_002287870.1\|107312_107831_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_002301591.1\|109906_110992_+	tyrosine recombinase XerS	NA	NA	NA	NA
WP_000222572.1\|111099_112053_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.7e-34	35.8
WP_002348774.1\|113134_114454_+\|transposase	IS1380-like element IS1678 family transposase	A0A1X9I6F6	Streptococcus_phage	6.3e-210	82.7
WP_002324322.1\|115716_116895_+\|transposase	IS256-like element ISEfm2 family transposase	A0A220NQR7	Corynebacterium_phage	2.6e-29	24.9
WP_002301128.1\|117474_118470_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA
WP_002301130.1\|118485_119655_-	SIS domain-containing protein	NA	NA	NA	NA
WP_002301131.1\|119670_120405_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_087043335.1\|121175_122338_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.2e-79	51.3
WP_002301811.1\|122906_124199_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	6.1e-32	41.0
WP_002313174.1\|124472_124733_-	hypothetical protein	NA	NA	NA	NA
WP_000997695.1\|124813_125992_-\|transposase	IS256-like element ISEf1 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-30	25.6
WP_002346943.1\|126329_127508_+\|transposase	IS256-like element ISEf1 family transposase	A0A220NQR7	Corynebacterium_phage	4.0e-30	25.3
126040:127377	attR	NA	NA	NA	NA
WP_073120200.1\|127859_128156_+\|transposase	IS3 family transposase	A0A0C5AEB1	Paenibacillus_phage	6.7e-19	59.2
WP_002287876.1\|129104_129500_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_002287875.1\|129509_130358_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_002287874.1\|130372_131200_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
WP_002285758.1\|132270_132465_+	hypothetical protein	NA	NA	NA	NA
WP_002287659.1\|132454_132808_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.7e-17	38.7
WP_002296127.1\|132909_134457_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.7e-44	28.9
WP_002300493.1\|134662_135832_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_099745857.1\|136171_136858_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	7.7e-127	99.1
WP_000195429.1\|137481_138654_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_002348774.1\|138904_140224_+\|transposase	IS1380-like element IS1678 family transposase	A0A1X9I6F6	Streptococcus_phage	6.3e-210	82.7
WP_000997695.1\|141315_142494_+\|transposase	IS256-like element ISEf1 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-30	25.6
WP_158294579.1\|143514_145062_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.1e-06	28.5
WP_002304894.1\|145119_145386_-	hypothetical protein	NA	NA	NA	NA
WP_002303113.1\|146061_146613_-	DUF334 domain-containing protein	NA	NA	NA	NA
WP_002319817.1\|147157_147838_+\|transposase	IS6-like element ISS1N family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-109	84.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023812

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12823 : 63446

Streptococcus_phage(30.0%)

holin,protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002300034.1\|12823_14881_-\|protease	serine protease	NA	NA	NA	NA
WP_002300033.1\|15025_15217_-	hypothetical protein	NA	NA	NA	NA
WP_002300032.1\|15403_15859_+	hypothetical protein	NA	NA	NA	NA
WP_002305782.1\|15855_16098_+	DUF5415 family protein	NA	NA	NA	NA
WP_002302858.1\|21144_23523_+	hypothetical protein	NA	NA	NA	NA
WP_002302857.1\|23583_24126_+	hypothetical protein	NA	NA	NA	NA
WP_002302856.1\|24203_24536_+	hypothetical protein	NA	NA	NA	NA
WP_002302855.1\|24536_25130_+	hypothetical protein	NA	NA	NA	NA
WP_002302854.1\|25151_27176_+	hypothetical protein	NA	NA	NA	NA
WP_002302853.1\|27175_28375_+	peptidoglycan DD-metalloendopeptidase family protein	Q6SEC2	Lactobacillus_prophage	2.5e-32	38.1
WP_002302852.1\|28390_29035_+	hypothetical protein	NA	NA	NA	NA
WP_002302851.1\|29045_29852_+	hypothetical protein	NA	NA	NA	NA
WP_033582323.1\|30262_31198_+	DUF4199 domain-containing protein	NA	NA	NA	NA
WP_002305788.1\|31241_31511_+	hypothetical protein	NA	NA	NA	NA
WP_002302849.1\|31786_32062_+	hypothetical protein	NA	NA	NA	NA
WP_002302844.1\|32103_32526_+	hypothetical protein	NA	NA	NA	NA
WP_033582318.1\|32545_34138_+	hypothetical protein	NA	NA	NA	NA
WP_002302842.1\|34158_34494_+	hypothetical protein	NA	NA	NA	NA
WP_002302840.1\|34639_34834_+	hypothetical protein	NA	NA	NA	NA
WP_002297404.1\|34969_36220_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002305801.1\|36629_39002_+	hypothetical protein	B5SP25	Lactococcus_phage	3.4e-12	29.7
WP_002353594.1\|39062_40532_+	DUF3991 domain-containing protein	NA	NA	NA	NA
WP_002303486.1\|40542_42552_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	1.6e-111	52.6
WP_002303484.1\|42897_43494_+	transcriptional regulator	NA	NA	NA	NA
WP_002303483.1\|43506_44406_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_002301801.1\|44408_44540_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.3e-11	83.3
WP_002305808.1\|44561_44894_+	single-stranded DNA-binding protein	W6LM61	Streptococcus_phage	6.1e-21	53.2
WP_002303482.1\|44938_45172_+	hypothetical protein	NA	NA	NA	NA
WP_002295624.1\|45330_45453_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_002305809.1\|45642_45867_+	hypothetical protein	NA	NA	NA	NA
WP_002305810.1\|46309_46516_+	hypothetical protein	NA	NA	NA	NA
WP_002300797.1\|46515_46767_+	hypothetical protein	NA	NA	NA	NA
WP_002300801.1\|46947_47220_+	hypothetical protein	NA	NA	NA	NA
WP_002300804.1\|47664_47844_+	hypothetical protein	NA	NA	NA	NA
WP_002311569.1\|47902_48259_+	hypothetical protein	NA	NA	NA	NA
WP_000222572.1\|49227_50181_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.7e-34	35.8
WP_002300807.1\|50301_50565_+\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_000997695.1\|50936_52115_+\|transposase	IS256-like element ISEf1 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-30	25.6
WP_002332708.1\|52646_53555_+\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA
WP_002300838.1\|57329_57614_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002300840.1\|57615_58131_+	YjbQ family protein	NA	NA	NA	NA
WP_002300842.1\|58814_59387_+	SIS domain-containing protein	NA	NA	NA	NA
WP_002287659.1\|61206_61560_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.7e-17	38.7
WP_002285758.1\|61549_61744_-	hypothetical protein	NA	NA	NA	NA
WP_002300843.1\|61925_63446_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.1e-48	31.6

DBSCAN-SWA_2

68386 : 80853

Streptococcus_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195429.1\|68386_69559_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_002354485.1\|71424_72111_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6
WP_016171138.1\|72158_73418_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.1e-54	38.2
WP_010782630.1\|73567_74182_-	recombinase family protein	M9Q1K0	Clostridium_phage	4.9e-16	30.9
WP_002288787.1\|74495_74918_+	hypothetical protein	NA	NA	NA	NA
WP_002299573.1\|74927_75131_+	hypothetical protein	NA	NA	NA	NA
WP_002299575.1\|75341_75926_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.9e-43	51.7
WP_016171137.1\|76094_77420_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	4.1e-100	43.8
WP_000568378.1\|77412_77763_+	hypothetical protein	NA	NA	NA	NA
WP_001021554.1\|77759_77939_+	hypothetical protein	NA	NA	NA	NA
WP_000026576.1\|78074_78365_+	hypothetical protein	NA	NA	NA	NA
WP_000195429.1\|78662_79835_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000101106.1\|80064_80853_+	ParA family protein	H7BUL8	unidentified_phage	4.7e-27	35.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023808_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023808_1

2375059-2375168

Orphan

Consensus_repeat	Method
CTTTGCTCAACCAGTATTATTCATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023808_1

>merge|NZ_CP023808|1|2375059-2375168|CRISPRCasFinder
CTTTGCTCAACCAGTATTATTCATCACCTATTCACTTCGTTCATAGTGATTCTACTCGCTTTGCTCGAAAGGAAACTCCTTTCGCTTTGCTCAACCAGTATTGTTCATCA

>NZ_CP023808|1|1|2375059-2375168|CRISPRCasFinder
CTTTGCTCAACCAGTATTATTCATCA	CCTATTCACTTCGTTCATAGTGATTCTACTCGCTTTGCTCGAAAGGAAACTCCTTTCG
CTTTGCTCAACCAGTATTGTTCATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023808.1\|WP_002303469.1\|2363646_2365806_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|180921
NZ_CP023808.1\|WP_002303471.1\|2371982_2373185_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP023808.1\|WP_002294577.1\|2381907_2382552_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341358
NZ_CP023808.1\|WP_002291634.1\|2374482_2374986_-\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NZ_CP023808.1\|WP_002294578.1\|2381593_2381746_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783
NZ_CP023808.1\|WP_002294587.1\|2375395_2376085_-\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP023808.1\|WP_002287788.1\|2368357_2369071_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP023808.1\|WP_002294583.1\|2378597_2379617_-\|L-lactate-oxidase	unknown	unknown	gnl\|CDD\|240088
NZ_CP023808.1\|WP_002294588.1\|2374061_2374430_-\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671
NZ_CP023808.1\|WP_002294580.1\|2380753_2381299_-\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP023808.1\|WP_002294579.1\|2381399_2381570_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|376355
NZ_CP023808.1\|WP_010782583.1\|2370259_2371792_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP023808.1\|WP_002287792.1\|2365855_2366821_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP023808.1\|WP_002294589.1\|2373266_2373956_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP023808.1\|WP_002294584.1\|2377634_2378507_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP023808.1\|WP_002294581.1\|2379789_2380677_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|283645
NZ_CP023808.1\|WP_002291638.1\|2376188_2376611_-\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP023808.1\|WP_002294585.1\|2376953_2377622_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_CP023808.1\|WP_002287787.1\|2369324_2370026_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|238693
NZ_CP023808.1\|WP_002294593.1\|2366909_2368049_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701

Protein	Function_ID	Function_description	E-value
NZ_CP023808.1\|WP_002303469.1\|2363646_2365806_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|180921	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP023808.1\|WP_002303471.1\|2371982_2373185_-\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.7222e-69
NZ_CP023808.1\|WP_002294577.1\|2381907_2382552_+\|CBS-domain-containing-protein	gnl\|CDD\|341358	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	5.69774e-14
NZ_CP023808.1\|WP_002291634.1\|2374482_2374986_-\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	3.03735e-67
NZ_CP023808.1\|WP_002294578.1\|2381593_2381746_-\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	3.12722e-17
NZ_CP023808.1\|WP_002294587.1\|2375395_2376085_-\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.66496e-146
NZ_CP023808.1\|WP_002287788.1\|2368357_2369071_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	6.15701e-49
NZ_CP023808.1\|WP_002294583.1\|2378597_2379617_-\|L-lactate-oxidase	gnl\|CDD\|240088	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain. LOX is a member of the family of FMN-containing alpha-hydroxyacid oxidases and catalyzes the oxidation of l-lactate using molecular oxygen to generate pyruvate and H2O2. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).	0
NZ_CP023808.1\|WP_002294588.1\|2374061_2374430_-\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	5.30333e-45
NZ_CP023808.1\|WP_002294580.1\|2380753_2381299_-\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	1.97252e-86
NZ_CP023808.1\|WP_002294579.1\|2381399_2381570_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	1.48e-13
NZ_CP023808.1\|WP_010782583.1\|2370259_2371792_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	3.59834e-170
NZ_CP023808.1\|WP_002287792.1\|2365855_2366821_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP023808.1\|WP_002294589.1\|2373266_2373956_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	3.65546e-19
NZ_CP023808.1\|WP_002294584.1\|2377634_2378507_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	2.63238e-103
NZ_CP023808.1\|WP_002294581.1\|2379789_2380677_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|283645	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915). This family consists of several bacterial proteins of unknown function. Members of this family have an alpha/beta hydrolase fold.	4.81944e-80
NZ_CP023808.1\|WP_002291638.1\|2376188_2376611_-\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	9.059e-96
NZ_CP023808.1\|WP_002294585.1\|2376953_2377622_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.41351e-73
NZ_CP023808.1\|WP_002287787.1\|2369324_2370026_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|238693	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.	8.8122e-119
NZ_CP023808.1\|WP_002294593.1\|2366909_2368049_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.46227e-61

>NZ_CP023808.1|WP_002291634.1|2374482_2374986_-|50S-ribosomal-protein-L10
MSEAIIAKKAAIVDEVSEKFTAAASVVVVDYRGLTVDEVTRLRKQLRDANVEMKVIKNSILSRAAKKAGLEGMDEVFTGPTAVAFSNEDVVAPAKIMDEFAKEAKALEIKGGIIEGKVSSLEEITALAKLPNREGLLSMLLSVLQAPVRNVAYAVKAVADKEDGDAA
>NZ_CP023808.1|WP_002294588.1|2374061_2374430_-|50S-ribosomal-protein-L7/L12
MALNIENIVAELKEATILELNDLVKAIEEEFGVSAAAPVAVAAAGGAAAAEEQTEFTVELTAAGDQKVKVIKAVREATGLGLKEAKAVVDGAPAPVKEGVSKEEAEELKAKLEEVGASVTVK
>NZ_CP023808.1|WP_002294589.1|2373266_2373956_-|TVP38/TMEM64-family-protein
MKKKIIRLILISLGIILILVVGYRLYLEYQTDIQLFLNPRASKAELLAHIRSHGTFASILLIVLTAVMCAVPGIPTSVVGVIAGLSFGPLTGAIINILGNALGNITAIFLMHRLKFLDKKTETNHWVQAIRQMKHPKIGVMLGYMIPVIPSSMVNFAADAMKLPLQQIILSIVIGVIPSSVLYACGGEALFHGYNKTAVTLVASVTVLVGLVVFIYKDRKKKQGKQKHK
>NZ_CP023808.1|WP_002303471.1|2371982_2373185_-|MFS-transporter
MKSNEKKPLTTSLILLLSITCGVVVANMYYIQPIGTKVAASLSVSTSAVGILTMLTQLGYALGLLFLVPLGDVVDRPKLIIRMAALSAVSLLAAFFAPSFTLFACASFLIGLLSIVPQIIIPYGAVLAGPKARGKVMGTLLSGLLVGILLSRTVSGIVASLFSWRMIYLFALCAVGILTLLLYWKMPRSVQQSSTAVSYLDSLKSLPHLVASQRLLREAAVSGFFMFGTFSIFWSTLIFYISSPAYNWGTFEAGILAIFGLSGAVAAPIVGRLADSYSERKIVYMGLVMQTISFIALLVGGSHLAILLLAIILLDVGNQFGQVANQTRVQGLGEAASNRNNTVFMFMYFIGGAAGSLLGTTMWQQYGWLGVTVSGLVFQGCAFFFQTVVFKGKRNLENKK
>NZ_CP023808.1|WP_010782583.1|2370259_2371792_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILTLNNITQQFGDKILYEGVDLQLNAGEHLGLIGQNGAGKSTLIKIITGEILPDDGQINWQKNIHKGYLDQYVEVDETLTIEEFLKTAYAKEYEKEEKIAFLYQTYSETFDDSLLEKAGKLQTELDQGVFYQIDTLVAEMSSGLGIDVLGLDSLLKNLSGGQRSKVILAKLLLENPDVLILDEPTNHLDDQHIQWLTQFLQDFDGAYIVISHDQEFLDQITTHIADIEFGKITKYTGHLKQALKQKEQNRESYLRQYHAQQKQIEKTEAYIRKYKAGSRSTMAKSRQKQLDKIERLTPPASASKAVFDFPFSPIVTTLAVETTDLVIGYDRPLLAPINLTIRFGENIAIRGFNGIGKSTLLKTLIGEIEKISGDFHFPDNTKINYFSQDLYWENPLETPLQYLSSQFPKATIKELRRQLAKAGLVNQLASEPLTTLSGGEQTKVKLAQLTMNQGNLLILDEPTNHIDQETKESLQDGIQKFPGTVIIVSHEQEFYQDLVQRVIEIEPK
>NZ_CP023808.1|WP_002287787.1|2369324_2370026_-|glucosamine-6-phosphate-deaminase
MEIIRVKNAEEGGKKAFEIIKEGMNKGAKVLGLATGSTPVTLYKEMTSSDLDFSEMTSVNLDEYVGLGGSDEQSYRHFMDVQLFDKKPFKETFVPDGKAEDLEAACKKYDQIIDAHPIDIQILGIGQNGHIGFNEPGASFDGTTSVVDLTESTINANKRFFDKAEDVPTKAVSMGIGSIMKSKEIVLMAFGESKADAIKGMIEGPVTNHLPASVLQNHDNVVVIIDEEAASKL
>NZ_CP023808.1|WP_002287788.1|2368357_2369071_-|MgtC/SapB-family-protein
MNDMVLTIPEIILRLGIAMLFGGAIGFERQYKNRPAGMRTHILVCMGACIIALIQVEIASGALRDALEYPQLAGTIRSDEARLIAQVVSGVGFLGAGTIIVTKQSVTGLTTAASLWAIAGLGIAIGMGYYSIAIISFIGIAIALTVVKRVIHVPTTKKLEIQFIHRKETKDFLTDYFEEKNIVIEDVNFDVKFVDDYRVYKNIYTIDLPKGLTYADVIEELSVHKNITKLHLVSIAQ
>NZ_CP023808.1|WP_002294593.1|2366909_2368049_-|AI-2E-family-transporter
MQSRFKQSKLFFWTVELVLTIIGVYFILQMPNIFSPILKMLSAVFLPLLVAGFIYYMFDPIVVFLEKHRIPRVFGFLLTFLVVIILVVLTVMNVVPQLMEQTIQLTQSLPMYADETSKWLNELAQREEFKNFNLEEQLASANLSLSNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTIILNIRKIYLLRRMEHVSEKLDSPKVLEETSE
>NZ_CP023808.1|WP_002287792.1|2365855_2366821_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MSETYYEAINWNEIEDIIDKSTWEKLTEQFWLDTRIPLSNDLDDWRTLSQLEKDTVGHVFGGLTLLDTVQSESGMDQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFDWTNTNPYLQKKAERINEIYKHGTPLEKKIASVFLETFLFYSGFYTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELYDPIGWTEEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGHVEAMKDDDYLIGLE
>NZ_CP023808.1|WP_002303469.1|2363646_2365806_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MSLKNLQDVSYFKLNNEINRPVNGQIPLNKDKEALVAFFEENVKPNTMTFLSIMEKINYLIDQEYIEAEFIQLYSPSFIEKLYQFLDEQHFSFKSFMAAYKFYSQYALKTNDGSAYLETYEDRVAFNALYFANGDEELALALADEMIHQRYQPATPSFLNAGRKRRGELVSCFLTQVTDDMNSIGRSINSALQLSRIGGGVGITLSNLREAGAPIKGYEGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLNVFHPDIIAFLSAKKENADEKIRVKTLSLGVIVPDKFYELTRKNEDMYLFSPYSVEKEYGVPFSYVNITAEYDHLVANPNIRKQKIKARDLENEISKLQQESGYPYVINIDTANRENPIDGKIIMSNLCSEILQVQTPSVINGKQEYEVLGTDISCNLGSTNIVNLMQSPNFGQSVRTMTRALTFITDASDIDVVPPIQNGNKLNHTIGLGAMGLHTYLAKEQMEYGSEDSLDFTNIYFMLLNYWTLVESNNIARERKQVFHNFEKSAYADGTYFEKYVTGEFQPKSEKVKALFEGIFIPTAEDWNALKQAVMKDGLYHQNRLAVAPNGSISYINDTSASIHPITRMIEERQEKKIGKIYYPAPYLSNETIPYYTSAYDMDMRKVIDVYAMAQQHVDQGMSLTLFMRSEIPEGIYEWKTTTKQTTRDLNILRHYAFHKGIKSIYYVRTFTDDAEEIGSNQCESCVI
>NZ_CP023808.1|WP_002294587.1|2375395_2376085_-|50S-ribosomal-protein-L1
MAKKSKKMQDALKKVDSSKVYPVAEAVALAKETNIAKFDATVEVAYRLNVDPKKADQQIRGAVVLPNGTGKTQTVLVFAKGDKAKEAEAAGADFVGDDDMVQKIQNGWFDFDVVVATPDMMATVGRLGRVLGPKGLMPNPKTGTVTMDVTKAVNEVKAGKVTYRVDKAGNIHVPIGKVSFDDEKLVENFAAIHDVLLKAKPSAAKGQYMKNVTITTTFGPGIHVDQASF
>NZ_CP023808.1|WP_002291638.1|2376188_2376611_-|50S-ribosomal-protein-L11
MAKKVEKIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGLIIPVVISVYEDRSFTFVTKTPPAAVLLKKAAKIEKGSGEPNKNKVAKVSSDQVREIAELKMEDLNAANVEAAMRMVEGTARSMGITVE
>NZ_CP023808.1|WP_002294585.1|2376953_2377622_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKDLRYRSVFDIIGPVMIGPSSSHTAGAARIGKIIRSIFGEQPDSVDIYLYESFAKTYRGHGTDIALVGGLLGMEPDDERLADSLKLAYEAGMEVLFVPKSEKAEHPNSVKMLLKKGTRKLSVTGISIGGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKGENAIMIIEVDDPQVEETVKRLKQLPNIDSVNYFD
>NZ_CP023808.1|WP_002294584.1|2377634_2378507_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFLSIEELVDQAKAYPSVAELMIAVEMEMSGRSRSHIIEIMEKNLSVMEQSINEGKEGVTSVTGITGGDAKKLDDYLNEADFLSGETILKAVRNAVAVNEVNAKMGLICATPTAGSAGVVPGVLMAVRDRLDLTHEQQLEFLFTAGAFGLVIANNASISGAEGGCQAEVGSASAMAAAALVCAKNGTPHQAAQAVAITLKNMMGLICDPVAGLVEVPCVKRNALGSSQAFISADMALAGIESVIPPDEVVAAMYQVGRQMPSIFKETAEGGLAVTPTAKRLAEEILNKRA
>NZ_CP023808.1|WP_002294583.1|2378597_2379617_-|L-lactate-oxidase
MEAGAFGYIRGGSEDEWTMKENTTSFNTKKIMPRILRGIDSADLHTSVFGIELDTPIIQAPSAAQGLAHEKGEADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRFNEFILNKAVEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAAAKQGLTPDDIKTIKEITHLPVIVKGIQSPEDAVIAISAGADGIWVSNHGGRQLDGGPASFEVLPKIAEVVNKRVPVIFDSGVRRGEHVFKALASGADLVAIGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLMD
>NZ_CP023808.1|WP_002294581.1|2379789_2380677_-|alpha/beta-fold-hydrolase
MTEPIKNLCKRATAAALVLISLFALSGCQTTKINTTEVSDKEKTAESSKVIEKTTIPTLFFHGYSGTENSFKGMLRRLEKNQQAVKELVLTVGTDGQIQATGDLSGKADNPMVQVLFEDNKNNEWNQAEWIKTCLLYLKENYGIDKVNIVGHSMGGVSALRYLGTYGQDTSLPQVQTLTAIGAPFNDFVDDSAQSLTDELAKGPAVVSNRYQDYQQMIGNIPITTRFFLIAGQLDETDLSDGTVPLNSALAVYALLKQRGNEIEEKVVTGENASHSMLHENQEVDQLVSRFIWKE
>NZ_CP023808.1|WP_002294580.1|2380753_2381299_-|transcription-termination/antitermination-protein-NusG
MESFEKNWYVLHTYSGYENKVKANIESRAQSMKMADFIFRVVVPEEKETEVKNGKEKEIVHKTFPGYVLVEMIMTDASWYVVRNTPGVTGFVGSHGAGSKPAPLLPEEVNHILRSIGMSLRQNDLEVEVGEVVKIIEGAFAGLEGQVTEVDGEKEKLKVNIDMFGRETSTELDFDQVDKID
>NZ_CP023808.1|WP_002294579.1|2381399_2381570_-|preprotein-translocase-subunit-SecE
MKFLKSVKDEIKQVTWPSRKQLRKDTLVVIETSIIFGLMFYVMDTAIQSLFGWILK
>NZ_CP023808.1|WP_002294578.1|2381593_2381746_-|50S-ribosomal-protein-L33
MAKKKAALACSVCGSRNYTKSVSEGKSGERLEINKFCKYCNQYTLHKETK
>NZ_CP023808.1|WP_002294577.1|2381907_2382552_+|CBS-domain-containing-protein
MLLKTLVYKKKDLTTVTETSTLEEALKILETSGYRCVPILDSSGNIFRGNIYKMHIYRHKANGGDMTLPVTHLLKNATKFIYLDTSFFKVFFTIKELPYIAVLDSENHFYGILTHSTLLNMLSQSWSVEQGSYVLTIASTGKQGDLAAIAKIISKHSSIASCITLDIEKDEYIRRTLITLPANTEAKVCETIVNHLEKKNYKVVEIENLQNQEA

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Crispr_ID: NZ_CP023808_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023808_2

2786457-2786643

Orphan

Consensus_repeat	Method
TTTTCTCGTACATCTACCGTTC	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP023808_2

>merge|NZ_CP023808|2|2786457-2786643|PILER-CR
TTTTCTCGTACATCTACTGTTCGATTTCCATTTTGACTACTTGTAGTATTCTGCAAGTTTTCTCGTACATCTACCGTTCTCGGTTGACTTGTCCCACTACTTTGTACATTTTCTCGTACATCTACTGTTCGATTTCCATTTTGACTACTTGTAGTATTCTGCAAGTTTTCTCGTACATCTACCGTTC

>NZ_CP023808|2|1|2786457-2786643|PILER-CR
TTTTCTCGTACATCTACTGTTC	GATTTCCATTTTGACTACTTGTAGTATTCTGCAAG
TTTTCTCGTACATCTACCGTTC	TCGGTTGACTTGTCCCACTACTTTGTACA
TTTTCTCGTACATCTACTGTTC	GATTTCCATTTTGACTACTTGTAGTATTCTGCAAG
TTTTCTCGTACATCTACCGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023808.1\|WP_002318021.1\|2792902_2794069_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP023808.1\|WP_002321715.1\|2791585_2791912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002297290.1\|2795527_2795995_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP023808.1\|WP_002322861.1\|2780692_2780941_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP023808.1\|WP_010782540.1\|2781810_2783085_+\|ISL3-like-element-IS1476-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP023808.1\|WP_002287505.1\|2794157_2794550_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP023808.1\|WP_002322860.1\|2781039_2781354_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002322858.1\|2783484_2783787_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002322862.1\|2779690_2780464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002348876.1\|2788835_2789054_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002348880.1\|2784002_2785394_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP023808.1\|WP_002348874.1\|2791919_2792123_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224393
NZ_CP023808.1\|WP_002295975.1\|2794565_2795009_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP023808.1\|WP_002322855.1\|2786001_2786190_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023808.1\|WP_002348879.1\|2785378_2785990_-\|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	unknown
NZ_CP023808.1\|WP_002288118.1\|2796114_2797653_-\|gluconokinase	unknown	unknown	gnl\|CDD\|212659
NZ_CP023808.1\|WP_000195429.1\|2790082_2791255_-\|IS256-like-element-IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP023808.1\|WP_002322813.1\|2792197_2792848_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP023808.1\|WP_002348835.1\|2779340_2779586_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP023808.1\|WP_002348881.1\|2783144_2783492_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023808.1\|WP_002318021.1\|2792902_2794069_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.79537e-35
NZ_CP023808.1\|WP_002297290.1\|2795527_2795995_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	7.4093e-53
NZ_CP023808.1\|WP_002322861.1\|2780692_2780941_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	7.3051e-06
NZ_CP023808.1\|WP_010782540.1\|2781810_2783085_+\|ISL3-like-element-IS1476-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.69673e-74
NZ_CP023808.1\|WP_002322813.1\|2792197_2792848_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.06613e-05
NZ_CP023808.1\|WP_002348880.1\|2784002_2785394_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	3.42818e-26
NZ_CP023808.1\|WP_002348874.1\|2791919_2792123_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	3.61213e-06
NZ_CP023808.1\|WP_000195429.1\|2790082_2791255_-\|IS256-like-element-IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	0
NZ_CP023808.1\|WP_002288118.1\|2796114_2797653_-\|gluconokinase	gnl\|CDD\|212659	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of a group of gluconate kinases (GntK, also known as gluconokinase; EC 2.7.1.12) encoded by the gntK gene, which catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, members in this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Some uncharacterized homologous sequences are also included in this subfamily. The Lactobacillus gnt operon contains a single gntK gene. The gnt operons of some bacteria, such as Corynebacterium glutamicum, have two gntK genes. For example, the C. glutamicum gnt operon has both a gluconate kinase gntV gene (also known as gntK) and a second hypothetical gntK gene (also known as gntK2). Both gluconate kinases encoded by these genes belong to this family, however the protein encoded by C. glutamicum gntV is not included in this model as it is truncated in the C-terminal domain.	0
NZ_CP023808.1\|WP_002295975.1\|2794565_2795009_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	4.45441e-103
NZ_CP023808.1\|WP_002348835.1\|2779340_2779586_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.60019e-05
NZ_CP023808.1\|WP_002287505.1\|2794157_2794550_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.13095e-82

>NZ_CP023808.1|WP_002322855.1|2786001_2786190_-|hypothetical-protein
MQLILQISTQDFLELAELCDSVKKATNEKITVTNYIELMIQEELMMKNEIESNFKCCSLEKM
>NZ_CP023808.1|WP_002348879.1|2785378_2785990_-|plasmid-mobilization-relaxosome-protein-MobC
MDDKQKMYEKNRKHSEALNFRVDKKTYLELTLIAKQRGISRADVCRERLKGLKYEPPLLAEDDRVALIKQLNQIGNNLNQAVKALNIIAKYFREQSENKKEKSLHFSFDVSRYNIFKDELANSIAKKMMISYPDDIFLESNRSTSSFLKLSEVEKDYFQYWLEKQTRPDTKEEYSQKVDRNLIHSIQIIASLKDEVKQLWELL
>NZ_CP023808.1|WP_002348880.1|2784002_2785394_-|relaxase/mobilization-nuclease-domain-containing-protein
MGATITSKGRKKNLSSLLQYAANPSKKEKCVAVSGINCSDNSEEALQEMNLVRTRMNKSEDIAQAFHVIHSFDKNISKELSIEKMHEIAVEFAEKAFPNSQIIVASHNDKDHFHSHLVINNIDMETCKRLRIDPKDLERMRKINDEVLVENGLEPVDNQYYENLEKRTNLYSNDPSKLKNGKINYQEFVQNAIEATLENCEVNSFVRFSDHLAKEYNIEVYQFSKTNNKLGYVLYKQDVNFYERRDELITLGREKQSRKEKSQYVERTFSARKLGKKYSFESVFERLEKNLEETHMNNFVDLDTEQIIALASGVDYKTGELNVPFVELDSIAQKQFSDHEGAKKIIKYDDFLREVDRHYANTISLEDDQEYTIKLHTDVNPRTLRSTKSKTILVKKTDQKELFLPAEGFKNCSHTPSAKQIHYQISRIMNDDVKMYRAKKDYEFTQQMIENQQRRQRDFEMDF
>NZ_CP023808.1|WP_002322858.1|2783484_2783787_-|hypothetical-protein
MSDPYIKVYCSKETKTIFDSFYEQNKGIFGTKANMFRVMVSNLPVLANQSNVKLSNPESKGIEQKISEIESIVVGKLDEIDQKLSYYLKNKCKTEEGKDV
>NZ_CP023808.1|WP_002348881.1|2783144_2783492_-|hypothetical-protein
MFKVYFPFQWLFKGILLLLLGLILFGSYLTIKARYFPEEKPVKIVTKDLKMGETYQADGVEITFKKVELTEKRNEFAQHDRVLQVTYTMKNDTENPIRPQQWSIENKRLFVKSCW
>NZ_CP023808.1|WP_010782540.1|2781810_2783085_+|ISL3-like-element-IS1476-family-transposase
MDNHTRKLLGLTDKHLFFDEEWLIEKEYKGVQAQFIKGKLDDSPSYCEHCRSVRIIRNGSYTTRTQMLKVKEKLTILELKRTRFLCHDCGRTFSAKTDLVDEHHQLTKELKQAILMELYENQSRKLIAKKYFVSDGTVTRILREATKHYQPRMNFLPTVLCMDEFKSMNSVSGSMSFICVDGTTNQLFTILEDRRLYKLTQYFLRFPRKARLKVKYLVMDMNASYCQLLKTVFPNAEIVTDRFHIVQHINRSFNQLRVQIMNRFRTSHSENQKKYRRLKRYWKLLLKDSTTLEPLKRHYHRLFKRPISQTEIVDELLSYNEELRTAYHFCQLLRYYFVKRGTEGFQETLKTISSTLPQSFKKKFTIFHRYQSGISNAFKVSHSNGVTEGLNNKIKLIKRIAFGYRNFYNFRARIYLQQGLIFEN
>NZ_CP023808.1|WP_002322860.1|2781039_2781354_-|hypothetical-protein
MADENKVVPLETLVINKEEFEQLFLDFFVQYDRIYDFSSSLDLFELEAEIIENSREENGKIIISVEKFNELFSETFEIDTDYYQPQEVFRLFRDQIIGISQTTK
>NZ_CP023808.1|WP_002322861.1|2780692_2780941_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MDTITPTNFKKNIGKVLQEVVHSNSEIEITRDSKNGLNDGVIMISKRKWELLQEELYLQRTGTWAYVSDLMKNEKEDDFKVV
>NZ_CP023808.1|WP_002322862.1|2779690_2780464_+|hypothetical-protein
MKKFAIILTCALLTGAISGCATSDTNSTSTETSTTTSEKNYPIHFFPVPDGFEAYYHDKKLDVPLSESNSIEKVLPIEIEKNQENIKLKAELPILNSTEIDWHENIKVTIEKGALAQLYTEKVEQFFESGANKDFSKISDYSDNFFNETQDEITNSTFMAEDMYNMTLKKIKAYDHPLNLTLNNGLLSFVLAGYVDYEYSPDYLETPLQHENNDINFRFVYESKSKTWLVDQLSTINTSFHELPKPENEADMVIKIF
>NZ_CP023808.1|WP_002348835.1|2779340_2779586_-|helix-turn-helix-transcriptional-regulator
MLFLKEEKLIDKENVIGSNIRRIRLEKGMGQTELVRELQLSKIAMTRETLVKIEGGRQHIKLDQLRAIRDILQVSYEDLLQ
>NZ_CP023808.1|WP_002348876.1|2788835_2789054_-|hypothetical-protein
MIENHLVDKIHCLDQNADTLELTESICSNTIVLDLKAVNDDYVTHIIIDRKIAQKLSESLRKWAEGGNNENN
>NZ_CP023808.1|WP_000195429.1|2790082_2791255_-|IS256-like-element-IS256-family-transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>NZ_CP023808.1|WP_002321715.1|2791585_2791912_-|hypothetical-protein
MASWLIEEIENERRKIMDAGITVMLDKQQTNQLKNYVFEMTKEAIDQARIDTGLERPFLKGKEMAKYLNVSYTTFLKFKRMGLPVILLEKMELFSKEECKKWILSHQI
>NZ_CP023808.1|WP_002348874.1|2791919_2792123_-|helix-turn-helix-domain-containing-protein
MITLNDQFIRSLRRHRADLILTKNDAAKLIGINRKTYVKIENGSKESIRASTYQKLVNWLLNDLKSK
>NZ_CP023808.1|WP_002322813.1|2792197_2792848_+|helix-turn-helix-transcriptional-regulator
MSIKTLLNLWFLCYNSLEFTIGGVTLNRIKFYIDSSKKTIKQISTETGINYTTLTNYYRGERNPRNTETWNILADYFHVPVSYLMGLDETNSIEQPNLDRIKTARLEKKDKIVKNIASLDSDYFTELSNLYFSMTSLLEVKLQEDDSDFLFLKSILEDSFEYTILFAKQKKFINKALNLNIDERKELESELFGNLTQVQVNNLKREITARLISKLQ
>NZ_CP023808.1|WP_002318021.1|2792902_2794069_+|site-specific-integrase
MSIQKYTTKSGARYSVRLYVRKDENGKQEYYVKKGFKTEKEAKLHEARKKVEIEDTGYHKPSNDLFITVYEEWLPSYRNRVQETTYQRTKDLFRLHILPKFGNKSISKITPVHCQNAVNEWALKFKNIKQLKSYSSQIFEYAIFAELLHRNPMANTNLPKREKKENENYFSLEELKAFWDILNKEEPLKHILIFQLLITTGIRKGELAALHWSDIYFEEQLMYVRKSYATIRNEEKNARRKTVRIQKNTKNISSERILPIDAQTIEMLKIWKKEQARELLQFGINTNTKNQLIFTYVNADGDINQPLHADYSNNILKRLEKKYKFKHVTIHGFRHTHATLLLEGGASIKETQDRLGHKNAETTLNTYSHVTEKAQRNALEKFIAYTGL
>NZ_CP023808.1|WP_002287505.1|2794157_2794550_-|30S-ribosomal-protein-S9
MAQVQYIGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLREVINQPFAVTETKGAYDVFVNVNGGGYAGQSGAIRHGIARALLEVDPDFRLALKRAGLLTRDARMVERKKPGLKKARKASQFSKR
>NZ_CP023808.1|WP_002295975.1|2794565_2795009_-|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVVDATDVPLGRLSTVVASVLRGKNKPTFTPHLDTGDFVIVINADKVKLTGKKATDKIYYRHSNYPGGLKSITAGELRAKNSRRLIETSVKGMLPKNTLGRKQFTKLNVYGGAEHPHAAQQPEVLDITNLI
>NZ_CP023808.1|WP_002297290.1|2795527_2795995_-|DNA-starvation/stationary-phase-protection-protein
MKFQQTKEVLNQLVADLSQMSVVVHQTHWYMRGPGFLTLHPMMDEFMDDLNAQLDEVSERLITLDGSPYSTLREFADNTKIPDEIGRWDRTIPERLETLVAGYRYLADLYQKGIEVSGEEGDDPTQDIFIEFKTATEKRIWMIQAHLGKAPEIDA
>NZ_CP023808.1|WP_002288118.1|2796114_2797653_-|gluconokinase
MNVSIGLDIGTTQTKAVAFTDEAQEAASAYFRYPLIQETQGMAEQDQELIFQGVCTVIKEVIKQLPSDTIIQFVSFSSAMHGLILLDEEKTPLSRMITWADNRAADEAEKLKYTVLGKEFYRQTGTPIHPMTPLNKIKWLQNSQPELFKKTAYFVGIKDYIFYRLFGELISDYGTASGTGYFDIHEFQWAEEVLDYLNIRIEQLPQVFPSTYQVTGLPSKTAAELGLPNDISFVLGGADGPLSNLGLGAFGDTIAALTVGTSGALRFITTQPQFHPEMETFCYVLDQKHWVVGGATSNGAGIFDWAGHTFLQEVVQSAKEKGENPYDALLSAIAFVPAGANGLIFHPYLLGERAPLWDADAFGSFIGLQRQHTEKEMMKAILEGICLNLYRILKGVCQENQLTEIRATGGFAQSPIFRQMMADVLGYPLVFPTVTEASALGAVILGWRSIGKIQSISEAQELIELKEQVGVQETDHKKYQKIYPLFVSTQKHLAQTYQQFAQLREELADSEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_CP023808.1	2786695-2786729	2	0.943
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_CP023808.1	2786644-2786672	1	0.966
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_CP023808.1	2786695-2786729	2	0.943

1. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to position: 2786695-2786729, mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

2. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to position: 2786644-2786672, mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

3. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to position: 2786695-2786729, mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25581-25615	0	1.0
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25689-25723	0	1.0
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41127-41161	0	1.0
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41235-41269	0	1.0
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50719-50753	0	1.0
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50827-50861	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25581-25615	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25689-25723	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41127-41161	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41235-41269	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50719-50753	0	1.0
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50827-50861	0	1.0
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50776-50804	1	0.966
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50884-50912	1	0.966
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25530-25558	1	0.966
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25638-25666	1	0.966
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41076-41104	1	0.966
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41184-41212	1	0.966
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25473-25507	2	0.943
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41019-41053	2	0.943
NZ_CP023808_2	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50935-50969	2	0.943
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX853854	Enterococcus faecium strain A120 plasmid pEMA120, complete sequence	25473-25507	2	0.943
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NC_016967	Enterococcus faecium plasmid pZB18, complete sequence	41019-41053	2	0.943
NZ_CP023808_2	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	NZ_KX976485	Enterococcus avium strain 19081 plasmid pEA19081, complete sequence	50935-50969	2	0.943
NZ_CP023808_2	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	33019-33047	8	0.724

1. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

2. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

3. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

4. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

5. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

6. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

7. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

8. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

9. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

10. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

11. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

12. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 0, identity: 1.0

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattctgcaag	Protospacer
***********************************

13. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

14. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

15. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

16. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

17. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

18. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 1, identity: 0.966

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

19. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

20. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

21. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

22. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

23. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

24. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 2, identity: 0.943

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

25. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 8, identity: 0.724

tcggttgacttgtcccactactttgtaca	CRISPR spacer
gatgttgacttgtcacgctactttgttac	Protospacer
   *********** *.*********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

82119 : 229233

124

Streptococcus_phage(13.51%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002298563.1\|82119_82866_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_002301399.1\|83538_84498_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8
WP_002326711.1\|84872_86051_+\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002317041.1\|86395_86734_-	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_002348801.1\|86868_87270_-	hypothetical protein	NA	NA	NA	NA
WP_002317547.1\|87381_88002_+	AAA family ATPase	NA	NA	NA	NA
WP_002294300.1\|88092_90762_-	YfhO family protein	NA	NA	NA	NA
WP_002290463.1\|90999_91188_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_002294298.1\|91457_91820_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002301169.1\|91871_93554_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_002301167.1\|93670_95707_+	ATP-dependent DNA helicase RecG	A0A2H4JBQ0	uncultured_Caudovirales_phage	5.3e-06	22.9
WP_002289721.1\|95755_96757_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_002294295.1\|96878_97121_+	acyl carrier protein	NA	NA	NA	NA
WP_002287889.1\|97388_98393_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-18	32.2
WP_002287891.1\|98393_99338_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-20	35.1
WP_002287892.1\|99337_100300_+	ABC transporter permease	NA	NA	NA	NA
WP_002287893.1\|100326_101241_+	ABC transporter permease	NA	NA	NA	NA
WP_002287894.1\|101266_103048_+	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002287896.1\|103395_104082_+	ribonuclease III	K7YH73	Megavirus	9.1e-27	32.3
WP_002301166.1\|104101_107683_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_002348798.1\|107691_108501_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002301165.1\|108512_109511_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_101701466.1\|109697_111965_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA
WP_002326066.1\|112148_113102_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002294287.1\|113119_113572_-	YueI family protein	NA	NA	NA	NA
WP_002294286.1\|113721_114672_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.6e-66	40.5
WP_002301163.1\|114664_115624_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_002301162.1\|115620_116376_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	2.2e-13	28.1
WP_002301160.1\|116398_117352_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002287909.1\|117995_118292_-\|tRNA	phenylalanyl-tRNA synthetase subunit alpha	NA	NA	NA	NA
WP_002287910.1\|118647_119004_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_002348747.1\|119013_119913_+	metallophosphoesterase	NA	NA	NA	NA
WP_010782507.1\|120145_121105_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8
WP_010782508.1\|121362_122808_+\|transposase	IS1182-like element ISEfa7 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	47.8
WP_002348590.1\|122853_123588_-	aquaporin family protein	NA	NA	NA	NA
WP_002301190.1\|123913_124324_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_002294273.1\|124316_125018_+	LrgB family protein	NA	NA	NA	NA
WP_002348592.1\|125017_126631_+	M protein trans-acting positive regulator	NA	NA	NA	NA
WP_002290506.1\|126620_126842_+	DUF2829 domain-containing protein	A0A0S2MV93	Bacillus_phage	1.1e-05	33.3
WP_002297929.1\|126838_127600_+	3-oxoacyl-ACP reductase	F2NZ40	Diadromus_pulchellus_ascovirus	1.2e-16	31.7
WP_002294268.1\|127980_128490_+	QueT transporter family protein	E7DN70	Pneumococcus_phage	7.5e-10	31.8
WP_002294267.1\|128559_129099_-	biotin transporter BioY	NA	NA	NA	NA
WP_002294265.1\|129238_129850_-	30S ribosomal protein S4	NA	NA	NA	NA
WP_002324284.1\|130165_130963_+	formate/nitrite transporter	NA	NA	NA	NA
WP_002294262.1\|130990_131626_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_002294261.1\|131645_132419_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002348595.1\|132826_133624_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_002297923.1\|133601_134015_+	hypothetical protein	NA	NA	NA	NA
WP_002294258.1\|133998_136644_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	3.6e-39	26.1
WP_002301736.1\|136661_138770_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.8e-57	41.1
WP_002348596.1\|138791_139352_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002297218.1\|139490_140786_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002285758.1\|141045_141240_+	hypothetical protein	NA	NA	NA	NA
WP_002287659.1\|141229_141583_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_002296127.1\|141684_143232_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_002348864.1\|143311_145300_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_002294254.1\|145522_146236_+	trehalose operon repressor	A0A291LID1	Streptomyces_phage	1.2e-05	39.7
WP_002294252.1\|146312_146759_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_002290528.1\|146928_147531_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_002289812.1\|147543_148545_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-07	25.8
WP_002341570.1\|148573_149152_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_002294249.1\|149203_149686_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_002289815.1\|149802_150177_+	hypothetical protein	NA	NA	NA	NA
WP_002294246.1\|150976_152329_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_002297079.1\|152475_153066_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_002294242.1\|153193_154543_-	amino acid permease	NA	NA	NA	NA
WP_002294240.1\|154710_155451_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.5e-30	39.7
WP_002297081.1\|155463_157056_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_002293448.1\|157623_157920_-	hypothetical protein	NA	NA	NA	NA
WP_002294236.1\|158095_158821_+	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_002301156.1\|158813_159656_+	chorismate mutase	NA	NA	NA	NA
WP_002294232.1\|159658_160180_+	transcription repressor NadR	NA	NA	NA	NA
WP_002289284.1\|160432_160996_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.3e-12	37.1
WP_002289282.1\|161246_161516_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_002297086.1\|161703_163830_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_002289280.1\|164339_164606_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_002289279.1\|164749_166741_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	8.4e-65	33.9
WP_002294228.1\|167094_168396_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002326809.1\|168771_170067_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.0e-10	21.4
WP_010782510.1\|170134_171313_-\|transposase	IS110 family transposase	A0A1X9I5Z0	Streptococcus_phage	3.8e-65	39.9
WP_002289277.1\|171659_173030_-	MATE family efflux transporter	NA	NA	NA	NA
WP_002289744.1\|173211_173535_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_002299254.1\|173859_174468_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_002348768.1\|174797_175514_+	pseudouridine synthase	NA	NA	NA	NA
WP_002289749.1\|175526_176222_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_002289751.1\|176305_176935_+	uridine kinase	A0A1V0SAA3	Catovirus	3.1e-34	40.2
WP_086953915.1\|177449_178788_+\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7
WP_002294220.1\|178857_179460_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	3.6e-19	30.6
WP_002296548.1\|179481_179970_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002294217.1\|180290_181664_+	hypothetical protein	NA	NA	NA	NA
WP_002294214.1\|181647_182115_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_002329999.1\|182363_184109_-	AarF/ABC1/UbiB kinase family protein	M4R0M8	Ostreococcus_lucimarinus_virus	1.3e-40	28.1
WP_002293424.1\|184304_185381_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002317074.1\|185533_186886_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_086272912.1\|187201_188719_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.3e-62	36.2
WP_002294209.1\|188848_189199_+	holo-ACP synthase	NA	NA	NA	NA
WP_002294207.1\|189214_190336_+	alanine racemase	NA	NA	NA	NA
WP_002289874.1\|190346_190709_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A291I9M9	Lactobacillus_phage	7.6e-09	37.8
WP_002293413.1\|190884_191154_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_002294206.1\|191343_192291_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_016171130.1\|192436_193732_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.1e-09	21.2
WP_002301399.1\|193998_194958_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8
WP_002294203.1\|195183_197889_+	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_002294202.1\|198485_200309_+	APC family permease	NA	NA	NA	NA
WP_002348885.1\|200450_200636_-	hypothetical protein	NA	NA	NA	NA
WP_002294199.1\|201110_201374_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_002301121.1\|201373_201640_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_002301116.1\|202870_203542_-	ABC transporter permease	NA	NA	NA	NA
WP_002301114.1\|203538_204456_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002293405.1\|204452_205094_-	ABC transporter permease	NA	NA	NA	NA
WP_002348889.1\|205097_206273_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.0e-17	32.9
WP_002350806.1\|206465_207497_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002341590.1\|209173_210127_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002319878.1\|210217_211513_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.5e-54	37.2
WP_002326809.1\|211674_212970_+\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.0e-10	21.4
WP_002289743.1\|213679_216319_+	cation-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.6e-84	31.2
WP_002294185.1\|216486_217185_-	DUF975 family protein	NA	NA	NA	NA
WP_002341590.1\|217287_218241_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002294183.1\|218469_219615_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.5e-82	40.9
WP_002300794.1\|219711_220092_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_010782512.1\|220396_222994_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_010782513.1\|222901_224512_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	8.4e-124	48.0
WP_002300788.1\|226789_227269_+	TRAP transporter small permease	NA	NA	NA	NA
WP_086953915.1\|227894_229233_+\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7

DBSCAN-SWA_2

260579 : 268316

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297361.1\|260579_262439_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.8e-30	26.0
WP_000398284.1\|262995_264201_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_002286940.1\|264984_266895_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.1e-37	29.8
WP_032509114.1\|266998_267223_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	8.5e-27	97.1
WP_002345010.1\|267339_267837_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.3e-88	97.6
WP_002345009.1\|267923_268316_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	4.6e-68	99.2

DBSCAN-SWA_3

283893 : 332057

Streptococcus_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002354485.1\|283893_284580_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6
WP_002348732.1\|284731_287773_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.0e-18	23.2
WP_002348733.1\|287962_288547_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_010782519.1\|288543_289683_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_002336644.1\|290060_292103_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_002336645.1\|292113_292734_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_002336646.1\|292745_293204_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002331203.1\|293222_293501_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002336647.1\|293525_294893_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_002331205.1\|294907_296053_+	galactonate dehydratase	Q6A202	Oenococcus_phage	1.2e-52	33.4
WP_002331206.1\|296079_296571_+	hypothetical protein	NA	NA	NA	NA
WP_002345001.1\|297013_298213_+	MFS transporter	NA	NA	NA	NA
WP_002331208.1\|298707_299466_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002331209.1\|299633_300569_+	1-phosphofructokinase	NA	NA	NA	NA
WP_002336649.1\|300565_302011_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_002336650.1\|302038_302494_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_002336651.1\|302512_303487_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA
WP_002336652.1\|304302_304917_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002331215.1\|305157_305541_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002301781.1\|305903_306413_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.8e-17	34.8
WP_002296570.1\|306512_307163_+	hypothetical protein	NA	NA	NA	NA
WP_002291914.1\|307613_308552_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_002291912.1\|308564_309617_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002296392.1\|309882_310518_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_002296391.1\|310708_311500_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002326839.1\|311979_312888_+\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA
WP_002295755.1\|312943_313441_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002340421.1\|313477_314161_-	hypothetical protein	NA	NA	NA	NA
WP_002296262.1\|314507_314774_+	DUF960 domain-containing protein	NA	NA	NA	NA
WP_002296261.1\|314800_315100_+	hypothetical protein	NA	NA	NA	NA
WP_002296259.1\|315273_315825_+	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_002296258.1\|315970_316264_+	hypothetical protein	NA	NA	NA	NA
WP_002304106.1\|316256_316553_+	peptidase	NA	NA	NA	NA
WP_002296256.1\|316627_317626_+	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_000222572.1\|317717_318671_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002294735.1\|318769_319486_+	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_002296623.1\|319684_320980_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.9e-55	37.5
WP_025478783.1\|321026_323075_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_002294732.1\|324284_325526_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_002294730.1\|325672_326308_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_002294728.1\|326498_327239_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_002296909.1\|327383_329021_-	membrane protein	NA	NA	NA	NA
WP_000195429.1\|329232_330405_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000997695.1\|330878_332057_-\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

766537 : 775009

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002294039.1\|766537_767182_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.2e-58	52.6
WP_002292340.1\|767196_767526_+	hypothetical protein	NA	NA	NA	NA
WP_002288071.1\|767539_768478_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.3e-35	34.4
WP_002288073.1\|768513_769338_+	stage 0 sporulation family protein	NA	NA	NA	NA
WP_002288076.1\|769330_769678_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.1e-18	41.1
WP_002288078.1\|769746_770619_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.1e-88	60.4
WP_002294035.1\|770727_771849_+	DNA polymerase IV	NA	NA	NA	NA
WP_002288081.1\|771902_772505_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.7e-53	58.6
WP_002288083.1\|772819_775009_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.8e-286	66.6

DBSCAN-SWA_5

831048 : 910159

Enterococcus_phage(25.64%)

integrase,terminase,portal,capsid,head,holin,tRNA,protease,tail,transposase

attL 887943:887958|attR 891296:891311

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002286621.1\|831048_833847_+\|tRNA	isoleucine--tRNA ligase	A0A2H4UVG0	Bodo_saltans_virus	1.6e-74	26.4
WP_002286618.1\|833895_835422_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	8.9e-75	35.3
WP_002286616.1\|835436_836084_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_002286678.1\|836267_836597_-	DUF4828 domain-containing protein	NA	NA	NA	NA
WP_002286614.1\|836773_837502_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA
WP_002286612.1\|837517_838531_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002286608.1\|838530_839808_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-35	28.8
WP_002286607.1\|839870_842573_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA
WP_002286606.1\|842724_843042_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002286604.1\|843071_843392_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_002286601.1\|843477_844938_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002286598.1\|845005_845227_+	hypothetical protein	NA	NA	NA	NA
WP_002286596.1\|845257_845440_+	DUF3188 domain-containing protein	NA	NA	NA	NA
WP_002286592.1\|845439_845853_+	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_002286589.1\|845975_847157_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002286587.1\|847687_848827_-\|integrase	site-specific integrase	Q9AZR0	Lactococcus_phage	2.6e-95	47.1
WP_002296617.1\|849125_849761_-	hypothetical protein	NA	NA	NA	NA
WP_002296616.1\|849873_850509_-	hypothetical protein	NA	NA	NA	NA
WP_002303013.1\|850542_851004_-	DUF4429 domain-containing protein	A0A0F6N4L7	Staphylococcus_phage	4.5e-06	34.8
WP_002348715.1\|851133_851565_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_002296612.1\|851582_851903_-	helix-turn-helix transcriptional regulator	A0A1S5SDR1	Streptococcus_phage	2.0e-13	40.2
WP_002290310.1\|852201_852978_+	phage antirepressor protein	A0A1Q1PVU2	Staphylococcus_phage	1.1e-73	53.8
WP_002296611.1\|852992_853196_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002286573.1\|853211_853550_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_002296610.1\|853536_853716_+	hypothetical protein	NA	NA	NA	NA
WP_002286568.1\|853758_854229_-	hypothetical protein	NA	NA	NA	NA
WP_002286562.1\|854315_855014_+	phage regulatory protein	D2IYT0	Enterococcus_phage	1.7e-25	34.6
WP_002286559.1\|855191_855533_+	hypothetical protein	NA	NA	NA	NA
WP_002286557.1\|855525_856197_+	DUF1071 domain-containing protein	A0A1B1P7F0	Bacillus_phage	4.2e-29	47.4
WP_002286553.1\|856202_856889_+	hypothetical protein	C9E2N1	Enterococcus_phage	3.2e-88	69.1
WP_002286552.1\|856891_857641_+	helix-turn-helix domain-containing protein	A0A1L2BY83	Clostridium_phage	1.7e-31	54.0
WP_002286696.1\|857652_857922_+	hypothetical protein	NA	NA	NA	NA
WP_002286695.1\|858083_858386_+	hypothetical protein	NA	NA	NA	NA
WP_002296606.1\|858382_858544_+	antitoxin	NA	NA	NA	NA
WP_002286694.1\|858540_858846_+	hypothetical protein	NA	NA	NA	NA
WP_002286550.1\|858845_859202_+	DUF1140 family protein	A0A2H4JAZ4	uncultured_Caudovirales_phage	3.1e-10	37.4
WP_002296604.1\|859161_859407_+	hypothetical protein	NA	NA	NA	NA
WP_002286547.1\|859403_859823_+	hypothetical protein	D2IZL0	Enterococcus_phage	4.1e-30	54.3
WP_002286545.1\|859819_860377_+	DUF1642 domain-containing protein	A0A0C5KKV2	Enterococcus_phage	2.8e-10	36.2
WP_002286693.1\|860373_860670_+	hypothetical protein	NA	NA	NA	NA
WP_002286542.1\|860746_861160_+	autolysin	C9E2P5	Enterococcus_phage	1.5e-56	81.0
WP_002300143.1\|861617_861893_-	hypothetical protein	A0A2H4JEH2	uncultured_Caudovirales_phage	9.9e-17	45.7
WP_002311723.1\|862346_862553_+	hypothetical protein	NA	NA	NA	NA
WP_002296600.1\|862748_862916_+	thymidylate synthase	NA	NA	NA	NA
WP_002286540.1\|862941_863286_+	HNH endonuclease	A0A1B1P757	Bacillus_phage	3.8e-26	57.1
WP_002296599.1\|863290_863572_+	hypothetical protein	NA	NA	NA	NA
WP_002286538.1\|863674_863989_+\|terminase	terminase	A0A1S7FYW6	Listeria_phage	3.3e-08	37.9
WP_002286533.1\|863966_865661_+\|terminase	terminase large subunit	A0A1B1P766	Bacillus_phage	3.0e-148	49.6
WP_002286530.1\|865680_866859_+\|portal	phage portal protein	A0A1B1P754	Bacillus_phage	5.4e-80	40.4
WP_002286527.1\|866821_867508_+\|protease	Clp protease ClpP	A0A2I6PDD0	Staphylococcus_phage	1.0e-30	39.7
WP_002286525.1\|867507_868668_+\|capsid	phage major capsid protein	A0A1B1P752	Bacillus_phage	1.8e-99	50.1
WP_002286524.1\|868677_869553_+	hypothetical protein	D2IYX3	Enterococcus_phage	5.6e-130	74.2
WP_002286523.1\|869549_869861_+	hypothetical protein	A0A1B1P751	Bacillus_phage	6.3e-12	42.1
WP_002286522.1\|869850_870204_+\|head	phage head closure protein	NA	NA	NA	NA
WP_002296598.1\|870193_870595_+	hypothetical protein	A0A1B1P759	Bacillus_phage	1.1e-13	33.3
WP_002286516.1\|870587_870992_+	hypothetical protein	R4IBU7	Listeria_phage	6.1e-07	29.5
WP_002286512.1\|871003_871612_+	hypothetical protein	Q8W5Z9	Listeria_phage	3.0e-34	41.1
WP_002286510.1\|871631_871994_+	hypothetical protein	NA	NA	NA	NA
WP_002305377.1\|871996_872179_+	hypothetical protein	NA	NA	NA	NA
WP_002348716.1\|872195_875627_+\|tail	phage tail tape measure protein	A0A1D3SNL5	Enterococcus_phage	3.1e-67	44.4
WP_002286500.1\|875677_876415_+\|tail	phage tail protein	NA	NA	NA	NA
WP_002286497.1\|876424_878716_+	hypothetical protein	A0A1D3SNL1	Enterococcus_phage	9.6e-89	30.0
WP_002286495.1\|878739_880866_+	hypothetical protein	A0A060AI60	Enterococcus_phage	1.4e-62	40.1
WP_002286491.1\|881028_881475_+	hypothetical protein	NA	NA	NA	NA
WP_002296594.1\|881476_881614_+	XkdX family protein	NA	NA	NA	NA
WP_002286686.1\|881651_881945_+	hypothetical protein	NA	NA	NA	NA
WP_002286683.1\|881941_882166_+\|holin	holin	NA	NA	NA	NA
WP_002349643.1\|882162_883188_+	N-acetylmuramoyl-L-alanine amidase	A0A139ZVY1	Enterococcus_phage	2.8e-64	61.3
WP_087046766.1\|884127_885289_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.1e-80	54.2
WP_002324322.1\|886176_887355_-\|transposase	IS256-like element ISEfm2 family transposase	NA	NA	NA	NA
WP_002286474.1\|887545_887953_+	hypothetical protein	NA	NA	NA	NA
887943:887958	attL	NA	NA	NA	NA
WP_002296902.1\|887966_888368_+	hypothetical protein	NA	NA	NA	NA
WP_002286473.1\|888369_888741_+	hypothetical protein	NA	NA	NA	NA
WP_002286680.1\|888776_889079_-	hypothetical protein	NA	NA	NA	NA
WP_076005172.1\|889327_889528_-\|integrase	tyrosine-type recombinase/integrase	Q9AZR0	Lactococcus_phage	4.6e-08	75.7
WP_070571278.1\|889832_891065_-	aminopeptidase	NA	NA	NA	NA
WP_002286467.1\|891321_891891_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
891296:891311	attR	NA	NA	NA	NA
WP_002297963.1\|892068_892509_-	flavodoxin	NA	NA	NA	NA
WP_002294533.1\|892666_893431_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_002286461.1\|893462_894386_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_002286457.1\|894461_895601_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_002286455.1\|895593_896394_+	glycosyltransferase	NA	NA	NA	NA
WP_002286453.1\|896393_897221_+	glycosyltransferase	NA	NA	NA	NA
WP_002321540.1\|897198_897933_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_002286449.1\|898032_898899_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.7e-102	62.5
WP_002286442.1\|898912_899485_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	8.3e-42	49.2
WP_002294532.1\|899506_900535_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.4e-69	42.9
WP_002286428.1\|900632_901484_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.7e-38	39.0
WP_002348826.1\|901517_903551_+	hypothetical protein	NA	NA	NA	NA
WP_002348825.1\|903594_904875_+	EpaQ family protein	NA	NA	NA	NA
WP_002285758.1\|905111_905306_+	hypothetical protein	NA	NA	NA	NA
WP_002287659.1\|905295_905649_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_002296127.1\|905750_907298_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_101701468.1\|907336_908620_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.2e-08	21.4
WP_010782578.1\|908884_910159_-\|transposase	ISL3-like element IS1476 family transposase	A0A1S5SBP9	Streptococcus_phage	8.6e-55	36.1

DBSCAN-SWA_6

1081987 : 1138109

Lysinibacillus_phage(25.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297218.1\|1081987_1083283_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002321398.1\|1083518_1085618_+	TFIIB-type zinc ribbon-containing protein	NA	NA	NA	NA
WP_002290060.1\|1085813_1086677_+	S1 RNA-binding protein	NA	NA	NA	NA
WP_002322512.1\|1086781_1087255_+	transcriptional repressor	NA	NA	NA	NA
WP_002297218.1\|1087321_1088617_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002294386.1\|1088872_1089760_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.2e-31	29.7
WP_002294387.1\|1089778_1090150_+	protein RibT	NA	NA	NA	NA
WP_002305297.1\|1090119_1090917_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.4e-08	25.0
WP_002296975.1\|1090900_1091470_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-14	32.7
WP_002294391.1\|1091475_1092192_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002296977.1\|1092521_1093133_+	ECF transporter S component	NA	NA	NA	NA
WP_002290168.1\|1093510_1095034_+	YfcC family protein	NA	NA	NA	NA
WP_002294399.1\|1095270_1096611_+	Sapep family Mn(2+)-dependent dipeptidase	NA	NA	NA	NA
WP_002294400.1\|1096763_1097501_+	thioesterase	NA	NA	NA	NA
WP_002294401.1\|1097665_1097887_-	ferredoxin	NA	NA	NA	NA
WP_002305295.1\|1097917_1098949_+	hypothetical protein	NA	NA	NA	NA
WP_002303122.1\|1098935_1100339_+	ATP-dependent DNA helicase RecQ	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	6.5e-64	35.4
WP_002294404.1\|1100404_1101040_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_002303123.1\|1101088_1101769_+	(d)CMP kinase	NA	NA	NA	NA
WP_002294406.1\|1101903_1103133_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_002296982.1\|1103314_1104625_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_002290178.1\|1104867_1105143_+	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	1.8e-26	69.7
WP_101701469.1\|1105278_1106574_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002297185.1\|1106890_1108186_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	21.4
WP_002294410.1\|1108421_1109468_+	hypothetical protein	NA	NA	NA	NA
WP_002289879.1\|1109469_1110729_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_002289878.1\|1110734_1111316_+	IDEAL domain-containing protein	NA	NA	NA	NA
WP_002294412.1\|1111397_1112273_-	YitT family protein	M1Q1P6	Streptococcus_phage	5.9e-63	45.3
WP_002290045.1\|1112420_1112753_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_002294414.1\|1112864_1114073_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.5e-45	51.7
WP_002290187.1\|1114226_1114682_+	hypothetical protein	NA	NA	NA	NA
WP_002297185.1\|1114875_1116171_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	21.4
WP_002290188.1\|1116565_1116841_+	hypothetical protein	NA	NA	NA	NA
WP_002288388.1\|1116853_1118932_+	sodium:proton antiporter	NA	NA	NA	NA
WP_002288390.1\|1119091_1120978_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.6e-52	29.8
WP_002294416.1\|1120989_1121937_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	7.1e-123	64.6
WP_002288392.1\|1121956_1122484_+	dihydrofolate reductase	A0A1D6X864	Bacillus_phage	6.7e-22	37.1
WP_002288393.1\|1122546_1123200_-	hemolysin III family protein	NA	NA	NA	NA
WP_002288394.1\|1123331_1124174_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	6.5e-19	40.2
WP_002288395.1\|1124331_1125228_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002288396.1\|1125230_1125944_+	YpmS family protein	NA	NA	NA	NA
WP_002288397.1\|1125963_1126482_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002288398.1\|1126478_1126706_+	YozE family protein	NA	NA	NA	NA
WP_002294418.1\|1126857_1127409_+	signal peptidase I	NA	NA	NA	NA
WP_002288403.1\|1127491_1128034_-	folate family ECF transporter S component	NA	NA	NA	NA
WP_002288405.1\|1128270_1128669_-	glyoxalase	NA	NA	NA	NA
WP_002296988.1\|1128928_1129789_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_002296990.1\|1129781_1130549_+	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	2.7e-27	39.5
WP_002303743.1\|1130604_1131462_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_002288411.1\|1131583_1133662_+	type I DNA topoisomerase	A0A167R9A0	Powai_lake_megavirus	1.2e-101	38.5
WP_002320953.1\|1133630_1135007_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_002288415.1\|1135204_1136110_+	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	9.4e-32	29.4
WP_002288419.1\|1136146_1136695_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
WP_002288421.1\|1136708_1138109_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	1.7e-43	28.8

DBSCAN-SWA_7

1202920 : 1211981

Gordonia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002288023.1\|1202920_1204216_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	4.5e-19	33.1
WP_002297115.1\|1204395_1204773_-	hypothetical protein	NA	NA	NA	NA
WP_002288021.1\|1205028_1205757_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	E3SPA9	Prochlorococcus_phage	4.6e-45	41.4
WP_002295474.1\|1205756_1206011_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_002288017.1\|1206012_1206684_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_002288015.1\|1206684_1208907_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.9e-150	41.3
WP_002288013.1\|1208891_1210331_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.3e-53	33.1
WP_002321731.1\|1210362_1211406_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.7e-62	43.7
WP_002288010.1\|1211402_1211981_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-26	37.4

DBSCAN-SWA_8

1495382 : 1544400

Streptococcus_phage(23.08%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010729485.1\|1495382_1496918_-\|transposase	IS1182-like element ISEfa7 family transposase	A0A1X9I5T2	Streptococcus_phage	1.4e-123	47.8
WP_002295142.1\|1497141_1497513_+	hypothetical protein	NA	NA	NA	NA
WP_002291278.1\|1497768_1498011_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_002296679.1\|1498042_1498945_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002291274.1\|1498957_1499146_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_002296677.1\|1499159_1499723_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_002300977.1\|1499760_1500654_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	5.2e-59	46.0
WP_002296674.1\|1500731_1501670_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_002296672.1\|1501703_1502054_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_002296671.1\|1502086_1502989_-	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_002296670.1\|1502981_1503839_-	glycosyltransferase family 8 protein	A0ZYL4	Archaeal_BJ1_virus	1.3e-19	27.1
WP_002348903.1\|1504172_1504982_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002296667.1\|1505021_1505519_+	cysteine hydrolase	NA	NA	NA	NA
WP_002321681.1\|1506163_1506487_+	hypothetical protein	NA	NA	NA	NA
WP_002296665.1\|1506650_1506905_+	hypothetical protein	NA	NA	NA	NA
WP_002296663.1\|1506974_1507220_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002348902.1\|1507316_1507661_+	hypothetical protein	NA	NA	NA	NA
WP_002303842.1\|1507721_1508285_-	hypothetical protein	NA	NA	NA	NA
WP_002293303.1\|1508852_1509053_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.9e-23	77.3
WP_002302440.1\|1509675_1510977_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-48	33.6
WP_002296656.1\|1511305_1512019_-	HAD family phosphatase	A0A1D8KPI1	Synechococcus_phage	5.4e-06	23.0
WP_002296654.1\|1512011_1513097_-	mannonate dehydratase	NA	NA	NA	NA
WP_002296653.1\|1513113_1513557_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA
WP_002321678.1\|1513590_1513944_-	hypothetical protein	NA	NA	NA	NA
WP_002296650.1\|1514055_1514457_-	hypothetical protein	NA	NA	NA	NA
WP_002296648.1\|1514493_1515003_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002303107.1\|1515024_1515882_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_002296646.1\|1515899_1516733_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002303106.1\|1516746_1517544_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_002321677.1\|1517576_1517861_-	alcohol dehydrogenase	NA	NA	NA	NA
WP_002296641.1\|1517857_1518859_-	2-hydroxyacid dehydrogenase	M1H9J0	Paramecium_bursaria_Chlorella_virus	2.8e-24	29.0
WP_002296640.1\|1518860_1519763_-	decarboxylating 6-phosphogluconate dehydrogenase	A0A1D8KGX1	Synechococcus_phage	3.3e-53	35.3
WP_002296639.1\|1519926_1520775_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002296638.1\|1521420_1521627_+	DUF3955 domain-containing protein	NA	NA	NA	NA
WP_002296637.1\|1521828_1522830_-	alpha/beta hydrolase	M1PGN2	Moumouvirus	2.5e-09	31.8
WP_002311095.1\|1522834_1524748_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_002296634.1\|1524915_1525422_-	cysteine hydrolase	NA	NA	NA	NA
WP_002296633.1\|1525581_1526022_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_002296632.1\|1526047_1527205_-	hypothetical protein	NA	NA	NA	NA
WP_002296631.1\|1527207_1527564_-	hypothetical protein	NA	NA	NA	NA
WP_002296629.1\|1527861_1528836_-	LPXTG-anchored fibrinogen/nidogen-binding adhesin SgrA	NA	NA	NA	NA
WP_002296628.1\|1529031_1529871_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002296627.1\|1530055_1530943_+	rotamase	NA	NA	NA	NA
WP_002311093.1\|1531526_1532222_-	fructose-6-phosphate aldolase	E3SKN5	Synechococcus_phage	1.0e-22	31.5
WP_002296624.1\|1532205_1532604_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_002287107.1\|1533012_1534263_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002289425.1\|1534404_1535400_-	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA
WP_002289423.1\|1535417_1535972_-	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA
WP_002289422.1\|1535959_1536451_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_002348791.1\|1536443_1538312_-	HTH domain-containing protein	NA	NA	NA	NA
WP_002289420.1\|1538330_1539131_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.6e-09	26.2
WP_002305631.1\|1539323_1539569_+	DUF378 domain-containing protein	NA	NA	NA	NA
WP_002303864.1\|1539707_1540193_+	hypothetical protein	NA	NA	NA	NA
WP_002289415.1\|1540648_1541062_+	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	2.1e-07	31.5
WP_002322258.1\|1541198_1541459_+	hypothetical protein	NA	NA	NA	NA
WP_002321532.1\|1541576_1541867_+	hypothetical protein	NA	NA	NA	NA
WP_000997695.1\|1542112_1543291_+\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_000222572.1\|1543446_1544400_-\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1680092 : 1777993

113

Enterococcus_phage(17.39%)

head,terminase,plate,capsid,portal,integrase,holin,tRNA,protease,tail,transposase

attL 1757125:1757143|attR 1774236:1774254

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002288520.1\|1680092_1681016_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_002294143.1\|1684193_1684415_+	hypothetical protein	NA	NA	NA	NA
WP_002294142.1\|1684522_1684870_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_002294141.1\|1684896_1687203_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.6e-19	23.7
WP_002288509.1\|1687215_1687527_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_002288501.1\|1687523_1687817_-	YlxR family protein	NA	NA	NA	NA
WP_002301262.1\|1687838_1689014_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_002288499.1\|1689037_1689511_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_002294138.1\|1689654_1694007_-	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	3.9e-22	41.4
WP_002294137.1\|1694218_1695928_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_002294136.1\|1695995_1697264_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_002294135.1\|1697424_1698225_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_002294134.1\|1698221_1699034_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.0e-25	46.8
WP_002287107.1\|1699442_1700693_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002293875.1\|1701011_1701569_-	ribosome recycling factor	NA	NA	NA	NA
WP_002293877.1\|1701571_1702294_-	UMP kinase	NA	NA	NA	NA
WP_002293878.1\|1702429_1703311_-	elongation factor Ts	NA	NA	NA	NA
WP_002293880.1\|1703409_1704192_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_002293881.1\|1704550_1705030_+	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_002326698.1\|1705246_1706338_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_002326699.1\|1706330_1706459_+	hypothetical protein	NA	NA	NA	NA
WP_002288430.1\|1706462_1707008_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_002288432.1\|1707460_1709152_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	2.9e-74	32.6
WP_002288434.1\|1709570_1710518_-	carbamate kinase	NA	NA	NA	NA
WP_002288437.1\|1710632_1711652_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_002288439.1\|1711742_1712972_-	arginine deiminase	NA	NA	NA	NA
WP_002288442.1\|1713432_1714134_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_002326809.1\|1714305_1715601_+\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.0e-10	21.4
WP_002301319.1\|1716264_1717281_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.4e-60	41.0
WP_002288445.1\|1717277_1717742_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_002348676.1\|1717748_1718291_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_002288447.1\|1718274_1719099_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_002288449.1\|1719187_1720168_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	5.8e-19	28.9
WP_002288451.1\|1720191_1721676_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_002288452.1\|1721687_1722677_-	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	2.1e-48	36.8
WP_002288457.1\|1722924_1723092_+	DUF3042 family protein	NA	NA	NA	NA
WP_002288458.1\|1723153_1724965_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA
WP_002288459.1\|1724961_1725327_-	DUF488 family protein	NA	NA	NA	NA
WP_002288461.1\|1725489_1725885_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_002288462.1\|1725902_1726865_-	ROK family glucokinase	NA	NA	NA	NA
WP_002293902.1\|1726864_1727077_-	YqgQ family protein	NA	NA	NA	NA
WP_002289885.1\|1727097_1727796_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002289886.1\|1727815_1728358_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_002301321.1\|1728489_1729494_-	iron ABC transporter permease	NA	NA	NA	NA
WP_002293904.1\|1729490_1730480_-	iron ABC transporter permease	NA	NA	NA	NA
WP_002293905.1\|1730476_1731283_-	ABC transporter ATP-binding protein	A0A1V0SJ29	Klosneuvirus	1.0e-13	32.1
WP_010782564.1\|1731448_1732405_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002296121.1\|1732481_1733000_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	7.1e-24	39.1
WP_002296119.1\|1733087_1733237_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_002288531.1\|1733464_1733911_+	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_002288533.1\|1734105_1736001_-	asparagine synthase (glutamine-hydrolyzing)	F2Y2L7	Organic_Lake_phycodnavirus	6.0e-20	26.2
WP_002303934.1\|1736325_1737300_-	choloylglycine hydrolase family protein	M1H001	Paramecium_bursaria_Chlorella_virus	3.0e-23	29.7
WP_086953915.1\|1738105_1739445_-\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7
WP_084201531.1\|1739515_1740541_-	N-acetylmuramoyl-L-alanine amidase	A0A139ZVY1	Enterococcus_phage	2.8e-64	61.3
WP_002286683.1\|1740537_1740762_-\|holin	holin	NA	NA	NA	NA
WP_002286686.1\|1740758_1741052_-	hypothetical protein	NA	NA	NA	NA
WP_002298029.1\|1741089_1741227_-	XkdX family protein	NA	NA	NA	NA
WP_002350774.1\|1741226_1741634_-	hypothetical protein	NA	NA	NA	NA
WP_002342973.1\|1741661_1742186_-	hypothetical protein	NA	NA	NA	NA
WP_002350775.1\|1742185_1742635_-	hypothetical protein	NA	NA	NA	NA
WP_002301866.1\|1742638_1743256_-	hypothetical protein	NA	NA	NA	NA
WP_002350776.1\|1743255_1744164_-\|plate	phage baseplate upper protein	A0A1P8BLW0	Lactococcus_phage	7.8e-10	25.2
WP_069314735.1\|1744176_1746936_-	CHAP domain-containing protein	D7RWE0	Brochothrix_phage	6.8e-49	55.6
WP_069314753.1\|1746932_1747637_-\|tail	phage tail protein	NA	NA	NA	NA
WP_069314734.1\|1747648_1749952_-\|tail	phage tail tape measure protein	Q8W5Z7	Listeria_phage	2.1e-83	48.3
WP_069314733.1\|1750146_1750611_-	hypothetical protein	A0A2H4J956	uncultured_Caudovirales_phage	1.7e-16	40.3
WP_069314732.1\|1750610_1751237_-\|tail	phage tail protein	A0A2H4JGN2	uncultured_Caudovirales_phage	4.4e-28	34.5
WP_069314731.1\|1751243_1751609_-	HK97 gp10 family phage protein	A0A2H4JDG0	uncultured_Caudovirales_phage	7.7e-17	41.1
WP_010725764.1\|1751598_1751937_-	hypothetical protein	A0A1B1P7P2	Bacillus_phage	6.6e-23	47.7
WP_069314730.1\|1751926_1752253_-\|head	phage head closure protein	A0A0N7IRA3	Lactobacillus_phage	1.7e-23	53.4
WP_002301326.1\|1752233_1752512_-\|head,tail	phage gp6-like head-tail connector protein	A0A1C8E967	Bacillus_phage	3.5e-22	62.7
WP_084201525.1\|1752513_1753878_-\|capsid	phage major capsid protein	A0A1B2APY9	Phage_Wrath	2.9e-125	69.4
WP_084201523.1\|1753890_1754466_-\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	1.1e-65	68.4
WP_099745849.1\|1754431_1755661_-\|portal	phage portal protein	A0A2H4J9C7	uncultured_Caudovirales_phage	2.7e-146	65.5
WP_069314727.1\|1755682_1757410_-\|terminase	terminase large subunit	A0A2H4JDG5	uncultured_Caudovirales_phage	7.6e-264	73.3
1757125:1757143	attL	NA	NA	NA	NA
WP_002301332.1\|1757406_1757859_-	hypothetical protein	A0A2H4JFK0	uncultured_Caudovirales_phage	8.0e-48	68.5
WP_002317992.1\|1757970_1758351_-	HNH endonuclease	A0A1B1P7N1	Bacillus_phage	9.1e-45	67.2
WP_069314726.1\|1758347_1758734_-	hypothetical protein	A0A1B1P7N8	Bacillus_phage	8.7e-11	37.3
WP_069314725.1\|1758714_1759101_-	hypothetical protein	NA	NA	NA	NA
WP_154212406.1\|1759405_1759549_-	hypothetical protein	NA	NA	NA	NA
WP_010725701.1\|1759873_1760341_-	ArpU family phage transcriptional regulator	D7RWH7	Brochothrix_phage	2.4e-07	29.1
WP_050397116.1\|1760415_1760856_-	transcriptional regulator	D2IYV6	Enterococcus_phage	9.0e-20	37.7
WP_069314724.1\|1760885_1761179_-	hypothetical protein	NA	NA	NA	NA
WP_002309099.1\|1761175_1761379_-	hypothetical protein	NA	NA	NA	NA
WP_069314723.1\|1761385_1761616_-	hypothetical protein	A0A0S2MYD2	Enterococcus_phage	8.8e-11	50.7
WP_069314722.1\|1761782_1762073_-	hypothetical protein	NA	NA	NA	NA
WP_069314721.1\|1762083_1762659_-	DUF1642 domain-containing protein	A0A0E3T929	Enterococcus_phage	2.1e-16	32.1
WP_048946628.1\|1762969_1763188_-	hypothetical protein	NA	NA	NA	NA
WP_069314720.1\|1763184_1763709_-	hypothetical protein	NA	NA	NA	NA
WP_069314719.1\|1763708_1763999_-	hypothetical protein	D2IZR3	Enterococcus_phage	2.4e-13	42.4
WP_084205653.1\|1763998_1764304_-	hypothetical protein	NA	NA	NA	NA
WP_069314717.1\|1764300_1764462_-	antitoxin	NA	NA	NA	NA
WP_010721325.1\|1764458_1764761_-	hypothetical protein	NA	NA	NA	NA
WP_069314716.1\|1764922_1765192_-	hypothetical protein	NA	NA	NA	NA
WP_069314715.1\|1765203_1766055_-	replication protein	A0A1S5SFJ6	Streptococcus_phage	2.1e-49	67.1
WP_069314714.1\|1766061_1766748_-	hypothetical protein	C9E2N1	Enterococcus_phage	2.2e-89	70.0
WP_002286557.1\|1766753_1767425_-	DUF1071 domain-containing protein	A0A1B1P7F0	Bacillus_phage	4.2e-29	47.4
WP_002286559.1\|1767417_1767759_-	hypothetical protein	NA	NA	NA	NA
WP_002286562.1\|1767936_1768635_-	phage regulatory protein	D2IYT0	Enterococcus_phage	1.7e-25	34.6
WP_002286568.1\|1768721_1769192_+	hypothetical protein	NA	NA	NA	NA
WP_069314713.1\|1769234_1769414_-	hypothetical protein	NA	NA	NA	NA
WP_002342110.1\|1769426_1769693_-	hypothetical protein	NA	NA	NA	NA
WP_002353431.1\|1769703_1769898_-	hypothetical protein	M1IFE9	Streptococcus_phage	1.1e-11	53.1
WP_033655448.1\|1770202_1770622_+	helix-turn-helix transcriptional regulator	A0A0M4QX29	Bacillus_phage	3.0e-41	62.3
WP_069314712.1\|1770638_1771061_+	ImmA/IrrE family metallo-endopeptidase	A0A0B5CTZ7	Listeria_phage	3.6e-34	50.7
WP_002317583.1\|1771089_1771290_+	hypothetical protein	A0A097BY73	Enterococcus_phage	2.5e-25	87.9
WP_069314711.1\|1771375_1771816_+	hypothetical protein	NA	NA	NA	NA
WP_069314710.1\|1771953_1773159_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5S7K9	Streptococcus_phage	7.3e-64	37.4
WP_002296332.1\|1773442_1774009_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002348678.1\|1774264_1775596_+	DUF1576 domain-containing protein	NA	NA	NA	NA
1774236:1774254	attR	NA	NA	NA	NA
WP_002296335.1\|1775561_1775912_+	hypothetical protein	NA	NA	NA	NA
WP_002296337.1\|1776423_1776768_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_002301399.1\|1777033_1777993_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8

DBSCAN-SWA_10

1782055 : 1918731

119

Streptococcus_phage(29.41%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002311774.1\|1782055_1783015_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	7.5e-11	27.2
WP_002326704.1\|1783227_1784136_+\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA
WP_002288573.1\|1784184_1784571_+	YxeA family protein	NA	NA	NA	NA
WP_000122610.1\|1784874_1786167_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-57	38.9
WP_002288574.1\|1786385_1787732_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_002288575.1\|1787843_1789193_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_002288576.1\|1789309_1790563_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	7.7e-24	55.3
WP_002288577.1\|1790633_1791119_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_002288579.1\|1791141_1791900_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	1.9e-25	36.4
WP_002288581.1\|1791915_1793094_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.9e-102	48.9
WP_002303943.1\|1793323_1795444_+	LTA synthase family protein	W6LM83	Streptococcus_phage	8.2e-220	58.0
WP_002296838.1\|1795666_1796392_+	hypothetical protein	NA	NA	NA	NA
WP_002288586.1\|1796381_1796891_+	hypothetical protein	NA	NA	NA	NA
WP_002288588.1\|1796960_1798409_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	1.7e-19	29.3
WP_002288590.1\|1798408_1799125_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.0e-33	35.7
WP_002288595.1\|1799105_1799456_-	SdpI family protein	NA	NA	NA	NA
WP_002288592.1\|1799599_1800373_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002302293.1\|1801129_1801432_+	hypothetical protein	NA	NA	NA	NA
WP_000997695.1\|1801870_1803049_+\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002321266.1\|1803385_1803625_+	hypothetical protein	NA	NA	NA	NA
WP_002289617.1\|1803986_1804247_-	hypothetical protein	NA	NA	NA	NA
WP_002289618.1\|1804431_1804929_-	GAF domain-containing protein	NA	NA	NA	NA
WP_002289619.1\|1805058_1805769_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_002289620.1\|1805781_1807446_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_002300930.1\|1807650_1808313_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_002303949.1\|1808322_1809138_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002288989.1\|1809399_1809843_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_002321036.1\|1809976_1810315_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002302962.1\|1810302_1810680_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002322902.1\|1810903_1812097_+	MFS transporter	NA	NA	NA	NA
WP_002288984.1\|1812262_1812685_-	HTH domain-containing protein	NA	NA	NA	NA
WP_002303955.1\|1813273_1813729_+	hypothetical protein	NA	NA	NA	NA
WP_002288982.1\|1813890_1815063_-	class C sortase	NA	NA	NA	NA
WP_002303963.1\|1818193_1820521_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002296840.1\|1820795_1821983_-\|transposase	IS256-like element IS16 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.2e-92	46.3
WP_002288970.1\|1822840_1823134_-	DUF2087 domain-containing protein	NA	NA	NA	NA
WP_002286913.1\|1823391_1823739_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002293717.1\|1823874_1824636_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002293716.1\|1824625_1825147_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002297190.1\|1825316_1826108_-	hypothetical protein	NA	NA	NA	NA
WP_002290277.1\|1826232_1826484_-	KH domain-containing protein	NA	NA	NA	NA
WP_002290274.1\|1826495_1826771_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002293714.1\|1827023_1827578_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	2.3e-12	29.3
WP_002297192.1\|1827656_1828178_-	dihydrofolate reductase	NA	NA	NA	NA
WP_002293710.1\|1828181_1828760_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_002293709.1\|1828871_1830290_-	signal recognition particle protein	NA	NA	NA	NA
WP_002293708.1\|1830310_1830649_-	putative DNA-binding protein	NA	NA	NA	NA
WP_002297194.1\|1830608_1831112_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_002293705.1\|1831242_1831947_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-38	36.2
WP_002303966.1\|1831943_1833680_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.2e-27	34.1
WP_002297196.1\|1833782_1836254_-	cation-translocating P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	7.0e-45	28.8
WP_002326707.1\|1836526_1837801_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	9.5e-54	35.9
WP_002289807.1\|1838087_1838978_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA
WP_002300070.1\|1839174_1839657_-	hypothetical protein	NA	NA	NA	NA
WP_002289810.1\|1839864_1840230_+	hypothetical protein	NA	NA	NA	NA
WP_002326708.1\|1840320_1840638_-	SdpI family protein	NA	NA	NA	NA
WP_010782561.1\|1841379_1842339_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8
WP_002301623.1\|1842461_1843436_-	choloylglycine hydrolase family protein	M1HVK5	Paramecium_bursaria_Chlorella_virus	7.1e-25	31.8
WP_002297404.1\|1843845_1845096_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002295273.1\|1845381_1845639_+	hypothetical protein	NA	NA	NA	NA
WP_008266934.1\|1845870_1846284_-	DUF4231 domain-containing protein	NA	NA	NA	NA
WP_002324322.1\|1846422_1847601_-\|transposase	IS256-like element ISEfm2 family transposase	NA	NA	NA	NA
WP_002326711.1\|1847873_1849052_+\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002295743.1\|1849212_1850122_-\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA
WP_099098442.1\|1850423_1851586_-\|transposase	IS3-like element ISEfa8 family transposase	A0A2I7SC85	Paenibacillus_phage	1.8e-80	54.2
WP_099745852.1\|1851690_1853029_+\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	3.4e-78	52.7
WP_002301695.1\|1853069_1853762_-	hypothetical protein	Q9MCC6	Lactobacillus_phage	4.0e-30	43.4
WP_002294835.1\|1854198_1854768_-	prevent-host-death protein	NA	NA	NA	NA
WP_002304701.1\|1854841_1855165_-	hypothetical protein	NA	NA	NA	NA
WP_002294839.1\|1855318_1856131_-	hypothetical protein	NA	NA	NA	NA
WP_002304700.1\|1856484_1857333_+	MoxR family ATPase	NA	NA	NA	NA
WP_002304699.1\|1857477_1858419_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_002299539.1\|1862213_1864385_-	copper/silver-translocating P-type ATPase CopB	A0A218MNH6	uncultured_virus	5.0e-71	32.3
WP_002312937.1\|1864404_1866591_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.3e-121	38.6
WP_002289040.1\|1866590_1866800_-	copper chaperone CopZ	NA	NA	NA	NA
WP_002294855.1\|1866812_1867253_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_002304690.1\|1867326_1867866_-	topology modulation protein	A0A097BYE2	Leuconostoc_phage	3.8e-20	34.5
WP_002288779.1\|1868480_1869947_-	amino acid permease	NA	NA	NA	NA
WP_002304688.1\|1870257_1872339_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.4e-115	35.6
WP_002288776.1\|1872862_1873222_-	YccF domain-containing protein	NA	NA	NA	NA
WP_002326717.1\|1873251_1873593_-	hypothetical protein	NA	NA	NA	NA
WP_002304684.1\|1873589_1874264_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002288767.1\|1875316_1876615_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.2e-59	30.3
WP_002304682.1\|1876654_1877845_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_002348809.1\|1877865_1878393_-	DUF5590 domain-containg protein	NA	NA	NA	NA
WP_002304681.1\|1878439_1881229_-	DEAD/DEAH box helicase family protein	A0A1X9I5C8	Streptococcus_phage	1.1e-89	30.9
WP_002288762.1\|1881375_1881576_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.5e-22	74.2
WP_002323868.1\|1882027_1882348_-	hypothetical protein	NA	NA	NA	NA
WP_002297185.1\|1882625_1883921_+\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	21.4
WP_002288760.1\|1884372_1885491_-	hypothetical protein	NA	NA	NA	NA
WP_002304680.1\|1885961_1887269_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_002340453.1\|1887387_1888587_+	YdcF family protein	NA	NA	NA	NA
WP_002289547.1\|1888613_1889882_-	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	2.2e-42	31.1
WP_002348853.1\|1891098_1891602_-	HD domain-containing protein	NA	NA	NA	NA
WP_002294889.1\|1891724_1892489_-	RNA methyltransferase	A0A2D1A6G0	Rhodococcus_phage	1.7e-05	26.1
WP_002289551.1\|1892596_1892872_+	acylphosphatase	NA	NA	NA	NA
WP_002312285.1\|1893309_1894260_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_002312284.1\|1894438_1894639_-	hypothetical protein	NA	NA	NA	NA
WP_010782560.1\|1895443_1896403_+\|transposase	IS30-like element IS6770 family transposase	NA	NA	NA	NA
WP_002312282.1\|1897268_1897799_-	hypothetical protein	NA	NA	NA	NA
WP_002312281.1\|1897795_1898413_-	VanZ family protein	NA	NA	NA	NA
WP_002312280.1\|1898994_1899216_-	transferase	NA	NA	NA	NA
WP_002348669.1\|1899393_1900926_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_002312276.1\|1901061_1902147_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002312275.1\|1902161_1902881_-	glycosyl transferase	A0A2K9L639	Tupanvirus	2.6e-08	25.0
WP_002312274.1\|1902877_1904188_-	hypothetical protein	NA	NA	NA	NA
WP_002348666.1\|1904214_1904805_-	poly-gamma-glutamate biosynthesis protein	NA	NA	NA	NA
WP_002312270.1\|1905122_1906184_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.5e-12	36.5
WP_002312264.1\|1906751_1907819_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002291721.1\|1907838_1908318_-	EpsH	NA	NA	NA	NA
WP_002325817.1\|1908334_1908796_-	hypothetical protein	NA	NA	NA	NA
WP_002312259.1\|1908809_1910060_-	nucleotide sugar dehydrogenase	M1IB49	Acanthocystis_turfacea_Chlorella_virus	8.9e-105	50.4
WP_002312258.1\|1910437_1911889_-	sugar transferase	NA	NA	NA	NA
WP_002312256.1\|1912209_1912974_-	hypothetical protein	NA	NA	NA	NA
WP_002348664.1\|1913001_1913700_-	CpsD/CapB family tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	6.0e-26	37.1
WP_002348663.1\|1913711_1914491_-	tyrosine protein kinase	NA	NA	NA	NA
WP_002296209.1\|1914506_1915451_-	transcriptional regulator	NA	NA	NA	NA
WP_002348662.1\|1915496_1916276_-	hypothetical protein	NA	NA	NA	NA
WP_002348661.1\|1916655_1918731_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA

DBSCAN-SWA_11

2094641 : 2120663

Bacillus_phage(33.33%)

plate,holin,tRNA,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222572.1\|2094641_2095595_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002289406.1\|2095628_2096858_-	GTPase HflX	NA	NA	NA	NA
WP_002289405.1\|2096859_2097777_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_002289404.1\|2097780_2098518_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	2.3e-12	40.0
WP_002289403.1\|2098608_2099136_-	hypothetical protein	NA	NA	NA	NA
WP_002289402.1\|2099315_2099909_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.9e-55	55.6
WP_002289401.1\|2100012_2100498_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002296291.1\|2100650_2100848_-	hypothetical protein	NA	NA	NA	NA
WP_002289400.1\|2100942_2102703_-	multidrug efflux ABC transporter subunit EfrB	W8CYL7	Bacillus_phage	2.5e-52	28.6
WP_002296290.1\|2102699_2104430_-	multidrug efflux ABC transporter subunit EfrA	W8CYL7	Bacillus_phage	2.1e-43	27.6
WP_002287947.1\|2104822_2105035_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_002287948.1\|2105036_2106716_+	ribonuclease J	NA	NA	NA	NA
WP_002294067.1\|2106969_2107170_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.7e-21	71.2
WP_002347086.1\|2108245_2108644_-	hypothetical protein	NA	NA	NA	NA
WP_002305550.1\|2108636_2109089_-	hypothetical protein	NA	NA	NA	NA
WP_002318238.1\|2109075_2109582_-	hypothetical protein	NA	NA	NA	NA
WP_002324322.1\|2109686_2110865_+\|transposase	IS256-like element ISEfm2 family transposase	NA	NA	NA	NA
WP_086953915.1\|2111093_2112433_-\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7
WP_002312527.1\|2112502_2113528_-	N-acetylmuramoyl-L-alanine amidase	A0A139ZVY1	Enterococcus_phage	3.6e-64	61.3
WP_002286683.1\|2113524_2113749_-\|holin	holin	NA	NA	NA	NA
WP_002286686.1\|2113745_2114039_-	hypothetical protein	NA	NA	NA	NA
WP_002298029.1\|2114076_2114214_-	XkdX family protein	NA	NA	NA	NA
WP_002350774.1\|2114213_2114621_-	hypothetical protein	NA	NA	NA	NA
WP_002342973.1\|2114648_2115173_-	hypothetical protein	NA	NA	NA	NA
WP_002350775.1\|2115172_2115622_-	hypothetical protein	NA	NA	NA	NA
WP_002301866.1\|2115625_2116243_-	hypothetical protein	NA	NA	NA	NA
WP_002350776.1\|2116242_2117151_-\|plate	phage baseplate upper protein	A0A1P8BLW0	Lactococcus_phage	7.8e-10	25.2
WP_002347081.1\|2117163_2119926_-	CHAP domain-containing protein	Q9AZX5	Lactococcus_phage	6.0e-138	39.1
WP_002303299.1\|2119922_2120663_-\|tail	tail protein	NA	NA	NA	NA

DBSCAN-SWA_12

2124024 : 2173071

Enterococcus_phage(26.09%)

head,terminase,portal,tRNA,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002303295.1\|2124024_2124633_-\|tail	tail protein	NA	NA	NA	NA
WP_002298045.1\|2124633_2125011_-	hypothetical protein	NA	NA	NA	NA
WP_002298046.1\|2125012_2125408_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_002298048.1\|2125400_2125772_-	hypothetical protein	NA	NA	NA	NA
WP_002298050.1\|2125771_2126113_-	hypothetical protein	NA	NA	NA	NA
WP_002311614.1\|2126124_2126340_-	hypothetical protein	NA	NA	NA	NA
WP_002312521.1\|2126362_2127253_-	DUF5309 domain-containing protein	NA	NA	NA	NA
WP_002350777.1\|2127267_2127969_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_002304492.1\|2128017_2128335_-	hypothetical protein	NA	NA	NA	NA
WP_033582200.1\|2128336_2129215_-\|head	phage head morphogenesis protein	NA	NA	NA	NA
WP_002343932.1\|2129294_2130830_-\|portal	phage portal protein	NA	NA	NA	NA
WP_002304486.1\|2130841_2132260_-\|terminase	phage terminase large subunit	A0A090EUA8	Clostridium_phage	2.5e-124	51.5
WP_002304484.1\|2132237_2132666_-	hypothetical protein	A0A1P8BMH5	Lactococcus_phage	2.6e-40	63.1
WP_002311618.1\|2132683_2132908_-	hypothetical protein	NA	NA	NA	NA
WP_002304480.1\|2133458_2133845_-	hypothetical protein	O34053	Streptococcus_phage	1.9e-29	55.2
WP_002322045.1\|2133857_2134271_-	autolysin	C9E2P5	Enterococcus_phage	2.5e-56	80.3
WP_002286693.1\|2134347_2134644_-	hypothetical protein	NA	NA	NA	NA
WP_002304475.1\|2134640_2134844_-	hypothetical protein	NA	NA	NA	NA
WP_002304474.1\|2134850_2135081_-	hypothetical protein	A0A0S2MYD2	Enterococcus_phage	8.8e-11	50.7
WP_002304473.1\|2135077_2135389_-	hypothetical protein	A0A0D3MVS9	Staphylococcus_phage	5.3e-27	58.0
WP_002304472.1\|2135527_2136343_-	prohibitin family protein	A0A288TXV9	Enterococcus_phage	1.8e-82	69.4
WP_002350868.1\|2136339_2136666_-	hypothetical protein	NA	NA	NA	NA
WP_002292988.1\|2136662_2136824_-	hypothetical protein	NA	NA	NA	NA
WP_002304469.1\|2136838_2137198_-	DUF1064 domain-containing protein	A0A1P8BKR1	Lactococcus_phage	6.8e-18	47.5
WP_002304468.1\|2137194_2138046_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	3.0e-27	30.2
WP_002303278.1\|2138060_2138861_-	hypothetical protein	B4XYS6	Lactobacillus_phage	8.9e-58	54.5
WP_002303277.1\|2138903_2139794_-	hypothetical protein	D2IYT9	Enterococcus_phage	6.2e-137	84.5
WP_002303275.1\|2139795_2140737_-	endonuclease	D2IZK1	Enterococcus_phage	2.7e-146	78.9
WP_002303273.1\|2140969_2141305_-	hypothetical protein	NA	NA	NA	NA
WP_002304466.1\|2141556_2141796_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	1.8e-27	81.1
WP_002299038.1\|2142104_2142260_-	hypothetical protein	NA	NA	NA	NA
WP_002304464.1\|2142331_2142562_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	4.4e-10	49.3
WP_002303266.1\|2142729_2142996_-	helix-turn-helix transcriptional regulator	A0A1W6JP54	Staphylococcus_phage	5.4e-12	52.7
WP_002303265.1\|2143195_2143900_+	LexA family transcriptional regulator	D7RWF2	Brochothrix_phage	6.2e-39	42.4
WP_002303264.1\|2143986_2145276_+	DUF4041 domain-containing protein	M1NRY5	Streptococcus_phage	5.6e-46	74.0
WP_002303263.1\|2145341_2146694_+	recombinase family protein	D2IZV7	Enterococcus_phage	1.7e-133	55.3
WP_002304462.1\|2146588_2147260_-	DNA repair protein RadC	NA	NA	NA	NA
WP_002287951.1\|2147314_2147968_-	HAD family phosphatase	NA	NA	NA	NA
WP_002294071.1\|2147957_2149271_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_002287953.1\|2149580_2152226_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	4.0e-163	42.9
WP_002287954.1\|2152618_2153266_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_002287955.1\|2153838_2155050_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_002287956.1\|2155065_2156208_-	cysteine desulfurase	NA	NA	NA	NA
WP_002287957.1\|2156372_2158094_-	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_002287958.1\|2158292_2158853_-	haloacid dehalogenase	A0A0H3UZF4	Geobacillus_virus	2.3e-28	45.1
WP_002287959.1\|2158878_2159718_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002287960.1\|2159751_2160585_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_002287961.1\|2160816_2161785_+	asparaginase	NA	NA	NA	NA
WP_002287962.1\|2161939_2162677_-	acyl-ACP thioesterase	NA	NA	NA	NA
WP_002287963.1\|2162692_2163526_-	phosphotransferase	NA	NA	NA	NA
WP_002294080.1\|2163727_2165056_-	aminopeptidase C	R4TV59	Phaeocystis_globosa_virus	7.3e-73	38.1
WP_002348865.1\|2166145_2166775_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_002287966.1\|2166888_2167263_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_086956687.1\|2167471_2168633_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.6e-79	51.3
WP_086953915.1\|2171732_2173071_+\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7

DBSCAN-SWA_13

2322062 : 2352263

Bacillus_phage(30.0%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002324322.1\|2322062_2323241_-\|transposase	IS256-like element ISEfm2 family transposase	NA	NA	NA	NA
WP_002287305.1\|2323507_2323870_-	DUF1827 family protein	NA	NA	NA	NA
WP_002294124.1\|2324092_2324845_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002294125.1\|2324984_2325908_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_002287308.1\|2325922_2326195_-	hypothetical protein	NA	NA	NA	NA
WP_002290607.1\|2326664_2328290_-	chaperonin GroEL	A0A219YK78	uncultured_virus	4.9e-156	56.8
WP_002288862.1\|2328340_2328625_-	co-chaperone GroES	A0A221S4M3	uncultured_virus	2.0e-12	40.2
WP_002288860.1\|2328849_2329512_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002303458.1\|2329587_2330880_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002303461.1\|2331049_2331679_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_002288854.1\|2331781_2332591_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	3.1e-34	33.6
WP_002305460.1\|2332645_2333515_-	hypothetical protein	NA	NA	NA	NA
WP_002288852.1\|2333515_2334832_-	hypothetical protein	NA	NA	NA	NA
WP_002294131.1\|2334828_2336664_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	5.2e-37	37.7
WP_002288850.1\|2336668_2337373_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.8e-45	41.6
WP_002294132.1\|2337562_2338423_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	4.6e-12	24.4
WP_002322652.1\|2338409_2338979_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_002294609.1\|2339927_2340314_-	DUF4064 domain-containing protein	NA	NA	NA	NA
WP_002294608.1\|2340310_2340832_-	RDD family protein	NA	NA	NA	NA
WP_002294607.1\|2340833_2341868_-	signal peptide peptidase SppA	A0A1C9LW82	Vibrio_phage	6.6e-13	29.2
WP_002348772.1\|2341900_2343316_-	HlyD family secretion protein	NA	NA	NA	NA
WP_002303464.1\|2343284_2345438_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	7.0e-41	27.8
WP_002303465.1\|2345695_2345932_+	hypothetical protein	NA	NA	NA	NA
WP_002294603.1\|2345950_2346166_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002348773.1\|2346868_2347558_-	response regulator transcription factor	NA	NA	NA	NA
WP_002348774.1\|2347681_2349001_+\|transposase	IS1380-like element IS1678 family transposase	A0A1X9I6F6	Streptococcus_phage	6.3e-210	82.7
WP_002296840.1\|2350574_2351762_+\|transposase	IS256-like element IS16 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.2e-92	46.3
WP_002294600.1\|2352116_2352263_-\|bacteriocin	EntF family bacteriocin induction factor	NA	NA	NA	NA

DBSCAN-SWA_14

2487876 : 2612426

Bacillus_phage(20.69%)

tRNA,protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297218.1\|2487876_2489172_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002294493.1\|2489326_2490010_+	rhamnogalacturonan acetylesterase	NA	NA	NA	NA
WP_002285996.1\|2490011_2490848_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_002302556.1\|2490858_2492613_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-39	26.9
WP_002285994.1\|2492888_2493230_-	YlbF family regulator	A0A1X9I5Y8	Streptococcus_phage	1.3e-10	34.9
WP_002294492.1\|2493297_2495469_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_002285989.1\|2495679_2496537_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_002285988.1\|2496607_2497465_-	ROK family protein	NA	NA	NA	NA
WP_002285985.1\|2497449_2500152_-	alpha-mannosidase	NA	NA	NA	NA
WP_002294491.1\|2500164_2501454_-	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_002302559.1\|2501603_2502650_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002285980.1\|2502651_2504805_+	alpha-1,2-mannosidase	NA	NA	NA	NA
WP_002304851.1\|2505277_2506729_-	response regulator transcription factor	NA	NA	NA	NA
WP_002285976.1\|2506725_2508450_-	sensor histidine kinase	NA	NA	NA	NA
WP_010782528.1\|2508442_2509057_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_002285974.1\|2509401_2510859_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002285972.1\|2510899_2511820_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002285971.1\|2511831_2512779_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_002285969.1\|2513257_2513977_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002304848.1\|2514025_2515672_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_002285964.1\|2515850_2516441_+	transporter	NA	NA	NA	NA
WP_002285962.1\|2516532_2518038_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_002285961.1\|2518121_2519474_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA
WP_002285960.1\|2519473_2519992_-	hypothetical protein	NA	NA	NA	NA
WP_002285954.1\|2520007_2520334_-	PTS cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_002285949.1\|2520346_2522326_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_002285948.1\|2522346_2522661_-	PTS cellobiose transporter subunit IIB	NA	NA	NA	NA
WP_002285944.1\|2522828_2523122_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_002321621.1\|2523199_2524312_-	FUSC family protein	NA	NA	NA	NA
WP_002297280.1\|2524464_2524689_+	hypothetical protein	NA	NA	NA	NA
WP_002285932.1\|2524698_2524878_+\|transposase	transposase	NA	NA	NA	NA
WP_104674935.1\|2525071_2525242_+	hypothetical protein	NA	NA	NA	NA
WP_016252731.1\|2525665_2526685_-	collagen binding domain-containing protein	NA	NA	NA	NA
WP_002285924.1\|2526831_2529903_-	hypothetical protein	NA	NA	NA	NA
WP_002303189.1\|2531809_2532571_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002285920.1\|2532670_2534392_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-37	28.0
WP_002285918.1\|2534406_2536191_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.7e-46	28.2
WP_002285917.1\|2536571_2538125_-	glycosyl hydrolase	NA	NA	NA	NA
WP_002285916.1\|2538472_2540887_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	72.8
WP_002301403.1\|2541313_2543332_-	LysM peptidoglycan-binding domain-containing protein	Q9ZXE4	Bacillus_phage	5.8e-13	39.6
WP_002285911.1\|2543701_2544358_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_002285909.1\|2544357_2545314_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-43	57.4
WP_002285906.1\|2545313_2545880_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	2.2e-34	42.8
WP_000997695.1\|2546498_2547677_-\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_076005178.1\|2547700_2547892_+	hypothetical protein	NA	NA	NA	NA
WP_002296840.1\|2548084_2549272_-\|transposase	IS256-like element IS16 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.2e-92	46.3
WP_025479400.1\|2549368_2549671_+	hypothetical protein	NA	NA	NA	NA
WP_002303477.1\|2550445_2551465_-	N-acetylmuramoyl-L-alanine amidase	A0A1G5SA77	Enterococcus_phage	2.4e-60	66.1
WP_002301818.1\|2551475_2551682_-\|holin	holin	NA	NA	NA	NA
WP_002301399.1\|2551814_2552774_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	2.2e-10	26.8
WP_002304713.1\|2552976_2553909_+	DUF4041 domain-containing protein	M1NRY5	Streptococcus_phage	1.8e-57	53.8
WP_002341521.1\|2553980_2554337_+	hypothetical protein	U4KJ82	Streptococcus_phage	9.2e-15	42.2
WP_000997695.1\|2554434_2555613_+\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_086953915.1\|2556483_2557823_-\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7
WP_002301355.1\|2557948_2559721_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-54	29.4
WP_002285883.1\|2559723_2561436_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.2e-14	25.4
WP_002285876.1\|2561550_2562219_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_002295567.1\|2562285_2563074_-	esterase family protein	NA	NA	NA	NA
WP_002295566.1\|2563156_2564629_-	MFS transporter	NA	NA	NA	NA
WP_002289731.1\|2564758_2565952_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.3e-150	72.0
WP_002297218.1\|2566306_2567602_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002296055.1\|2575783_2577280_-\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	8.7e-91	40.9
WP_002290055.1\|2577390_2578395_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_002296053.1\|2578395_2579283_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_002287418.1\|2579499_2581611_-\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	9.1e-110	50.3
WP_002287415.1\|2581700_2582246_-	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	4.1e-06	25.3
WP_002287414.1\|2582245_2583691_-\|tRNA	tRNA lysidine(34) synthetase TilS	E3T4I1	Cafeteria_roenbergensis_virus	6.8e-08	24.5
WP_002287412.1\|2583810_2584281_-	RNA-binding protein S1	NA	NA	NA	NA
WP_002287409.1\|2584326_2584752_-	septum formation initiator family protein	NA	NA	NA	NA
WP_002287407.1\|2584818_2585088_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_101701472.1\|2585098_2586694_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_002287403.1\|2586708_2590230_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_002287401.1\|2590246_2590807_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002287399.1\|2591159_2592134_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_002287397.1\|2592303_2593704_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_002287391.1\|2593781_2594504_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_002287389.1\|2594582_2595089_-	membrane protein	NA	NA	NA	NA
WP_002322796.1\|2595211_2597011_+	M3 family oligoendopeptidase	NA	NA	NA	NA
WP_002297218.1\|2597172_2598468_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002322795.1\|2598600_2600139_-	hypothetical protein	B5LJD6	Mycobacterium_phage	2.3e-17	50.5
WP_000122610.1\|2600518_2601811_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-57	38.9
WP_002297218.1\|2601955_2603251_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002287385.1\|2603422_2603932_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_002296044.1\|2603935_2604790_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002287382.1\|2604944_2605583_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_002287380.1\|2605583_2606234_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_002287379.1\|2606246_2607146_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_002287377.1\|2607310_2609380_-	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A1V0SDC3	Indivirus	3.5e-21	30.3
WP_002287376.1\|2609376_2610117_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_002287374.1\|2610129_2611488_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_002287372.1\|2611487_2612426_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	5.2e-09	29.7

DBSCAN-SWA_15

2694956 : 2708074

Streptococcus_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297366.1\|2694956_2695271_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	1.0e-25	53.4
WP_002297365.1\|2695283_2695658_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	2.4e-34	66.1
WP_002311649.1\|2695658_2696003_+	hypothetical protein	NA	NA	NA	NA
WP_002343904.1\|2696085_2697231_+	DUF87 domain-containing protein	A0A1S5SFB5	Streptococcus_phage	6.0e-132	62.8
WP_002297361.1\|2697945_2699805_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.8e-30	26.0
WP_002297360.1\|2699898_2700138_+	hypothetical protein	A0A1S5SFB5	Streptococcus_phage	2.1e-23	80.3
WP_002297358.1\|2700215_2700890_+	AAA family ATPase	NA	NA	NA	NA
WP_002321810.1\|2701122_2701557_+	DNA (cytosine-5-)-methyltransferase	A0A1S5SDW2	Streptococcus_phage	6.5e-63	77.1
WP_002297356.1\|2701557_2702265_+	DNA methylase	A0A1S5SEK0	Streptococcus_phage	5.8e-53	50.4
WP_002297354.1\|2702254_2702545_+	hypothetical protein	NA	NA	NA	NA
WP_002297353.1\|2702803_2703988_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.9e-142	61.6
WP_002317225.1\|2703984_2704122_+	DUF3789 domain-containing protein	NA	NA	NA	NA
WP_101701473.1\|2704867_2706781_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.3e-35	29.7
WP_033658092.1\|2706884_2707109_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	1.2e-23	83.8
WP_002297350.1\|2707121_2707625_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	9.2e-53	59.9
WP_002297349.1\|2707684_2708074_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	3.9e-43	68.3

DBSCAN-SWA_16

2735252 : 2825025

Streptococcus_phage(19.05%)

integrase,transposase

attL 2722349:2722363|attR 2806151:2806166

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2722349:2722363	attL	NA	NA	NA	NA
WP_002297332.1\|2735252_2735447_+\|transposase	IS3 family transposase	NA	NA	NA	NA
2722349:2722363	attL	NA	NA	NA	NA
WP_077828743.1\|2735638_2735794_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_002297326.1\|2737650_2739267_-	cobalamin biosynthesis protein	NA	NA	NA	NA
WP_002317220.1\|2739384_2739603_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002297325.1\|2739797_2740259_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.5e-12	35.0
WP_002304820.1\|2740451_2740691_-	hypothetical protein	NA	NA	NA	NA
WP_002287522.1\|2741322_2741727_+\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.3e-52	73.8
WP_002287525.1\|2741743_2742892_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
2742446:2742460	attR	NA	NA	NA	NA
WP_002322279.1\|2744146_2744269_-	putative metal homeostasis protein	NA	NA	NA	NA
2742446:2742460	attR	NA	NA	NA	NA
WP_002304819.1\|2744298_2745282_-	GTP-binding protein	NA	NA	NA	NA
WP_002297320.1\|2745305_2745455_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_002297319.1\|2745475_2745853_-	hypothetical protein	NA	NA	NA	NA
WP_002297318.1\|2745884_2746064_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_002297316.1\|2746078_2746348_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_002297310.1\|2746870_2748613_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.4e-30	29.1
WP_002297309.1\|2748596_2750351_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-24	24.8
WP_002297308.1\|2750460_2751030_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_002311663.1\|2751047_2752472_-	energy-coupling factor ABC transporter ATP-binding protein	A0A1V0SGN0	Hokovirus	5.9e-20	26.4
WP_002297304.1\|2752473_2753142_-	cobalt transporter	NA	NA	NA	NA
WP_071858995.1\|2753272_2753857_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002297302.1\|2754187_2754421_-	iron-dependent repressor	NA	NA	NA	NA
WP_002297295.1\|2754435_2755386_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002297294.1\|2755382_2756225_-	metal ABC transporter permease	NA	NA	NA	NA
WP_002297293.1\|2756546_2757734_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	4.6e-26	28.7
WP_002297292.1\|2757825_2758566_-	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	5.7e-19	33.2
WP_002320809.1\|2759253_2759412_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002297291.1\|2759483_2760710_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_002348684.1\|2761039_2761660_-	hypothetical protein	NA	NA	NA	NA
WP_002364278.1\|2761740_2762151_-	hypothetical protein	NA	NA	NA	NA
WP_002298782.1\|2763700_2764477_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002322873.1\|2764574_2765222_-	HAD family phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	4.5e-12	27.4
WP_002298780.1\|2765221_2766052_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_002298779.1\|2766051_2766801_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002298777.1\|2766814_2767279_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002312606.1\|2767328_2767790_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA
WP_002298774.1\|2767771_2768746_-	SIS domain-containing protein	NA	NA	NA	NA
WP_076005180.1\|2768952_2770416_+\|transposase	IS1182-like element ISEfa7 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	47.8
WP_002322870.1\|2771856_2773404_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_002348831.1\|2773652_2774432_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002322868.1\|2774506_2774965_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_002322867.1\|2774976_2776236_-	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_002322866.1\|2776351_2776666_-	ATP-binding protein	NA	NA	NA	NA
WP_002350767.1\|2776811_2778308_-	RNA-directed DNA polymerase	Q2P9X6	Enterobacteria_phage	8.5e-70	34.3
WP_002348834.1\|2778485_2778965_-	DUF3841 domain-containing protein	NA	NA	NA	NA
WP_002348835.1\|2779340_2779586_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002322862.1\|2779690_2780464_+	hypothetical protein	NA	NA	NA	NA
WP_002322861.1\|2780692_2780941_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_002322860.1\|2781039_2781354_-	hypothetical protein	NA	NA	NA	NA
WP_010782540.1\|2781810_2783085_+\|transposase	ISL3-like element IS1476 family transposase	A0A1S5SBP9	Streptococcus_phage	6.6e-55	36.1
WP_002348881.1\|2783144_2783492_-	hypothetical protein	NA	NA	NA	NA
WP_002322858.1\|2783484_2783787_-	hypothetical protein	NA	NA	NA	NA
WP_002348880.1\|2784002_2785394_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_002348879.1\|2785378_2785990_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_002322855.1\|2786001_2786190_-	hypothetical protein	NA	NA	NA	NA
WP_016252733.1\|2786203_2788849_-	hypothetical protein	NA	NA	NA	NA
WP_002348876.1\|2788835_2789054_-	hypothetical protein	NA	NA	NA	NA
WP_000195429.1\|2790082_2791255_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_002321715.1\|2791585_2791912_-	hypothetical protein	NA	NA	NA	NA
WP_002348874.1\|2791919_2792123_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002322813.1\|2792197_2792848_+	helix-turn-helix transcriptional regulator	Q20DG0	Lactobacillus_phage	3.2e-05	33.3
WP_002318021.1\|2792902_2794069_+\|integrase	site-specific integrase	A0A172LN96	Lactococcus_phage	3.3e-45	34.0
WP_002287505.1\|2794157_2794550_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002295975.1\|2794565_2795009_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_002297290.1\|2795527_2795995_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_002288118.1\|2796114_2797653_-	gluconokinase	NA	NA	NA	NA
WP_002288144.1\|2797732_2798419_+	prepilin peptidase	NA	NA	NA	NA
WP_002288119.1\|2798619_2799147_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002288121.1\|2799230_2799908_-	beta-phosphoglucomutase	A0A1D8KNV9	Synechococcus_phage	1.6e-07	23.2
WP_002288122.1\|2799904_2801035_-	glycerate kinase	W6LM47	Streptococcus_phage	1.6e-73	51.6
WP_002288124.1\|2801034_2803218_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_002288127.1\|2803214_2804240_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002288129.1\|2804284_2805112_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_002288131.1\|2805108_2806176_-	zinc-binding alcohol dehydrogenase	NA	NA	NA	NA
WP_002288133.1\|2806201_2807038_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002288134.1\|2807034_2807904_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_002288135.1\|2807973_2809257_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002288137.1\|2809270_2810956_-	sucrose phosphorylase	NA	NA	NA	NA
WP_002288139.1\|2811230_2812256_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_010782538.1\|2812850_2816504_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	2.2e-63	25.0
WP_002320801.1\|2816582_2820209_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	1.5e-48	24.7
WP_002289394.1\|2820927_2821896_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002289390.1\|2821913_2822819_+	ABC transporter permease	NA	NA	NA	NA
WP_002289388.1\|2822815_2823622_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-08	25.1
WP_002297218.1\|2823729_2825025_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9

Anti-CRISPR protein detection

Acr_ID: NZ_CP023808.1|WP_002304820.1|2740451_2740691_-|hypothetical-protein

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Acr_ID: NZ_CP023808.1|WP_002348684.1|2761039_2761660_-|hypothetical-protein

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Acr_ID: NZ_CP023808.1|WP_002364278.1|2761740_2762151_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP023808.1|WP_002304820.1|2740451_2740691_-|hypothetical-protein

2740451_2740691_-

79 aa aa

2735252-2825025

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP023808_2	Orphan	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	2786644-2786672	1

1. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

2. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

3. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786644-2786672, mismatch: 1

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

NZ_CP023808.1|WP_002348684.1|2761039_2761660_-|hypothetical-protein

2761039_2761660_-

206 aa aa

2735252-2825025

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP023808_2	Orphan	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	2786644-2786672	1

1. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

2. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

3. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786644-2786672, mismatch: 1

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

NZ_CP023808.1|WP_002364278.1|2761740_2762151_-|hypothetical-protein

2761740_2762151_-

136 aa aa

2735252-2825025

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP023808_2	Orphan	2.1\|2786479\|35\|NZ_CP023808\|PILER-CR	2786479-2786513	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.3\|2786587\|35\|NZ_CP023808\|PILER-CR	2786587-2786621	35	2786695-2786729	2
NZ_CP023808_2	Orphan	2.2\|2786536\|29\|NZ_CP023808\|PILER-CR	2786536-2786564	29	2786644-2786672	1

1. spacer 2.1|2786479|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

2. spacer 2.3|2786587|35|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786695-2786729, mismatch: 2

gatttccattttgactacttgtagtattctgcaag	CRISPR spacer
gatttccattttgactacttgtagtattttgtaag	Protospacer
****************************.**.***

3. spacer 2.2|2786536|29|NZ_CP023808|PILER-CR matches to NZ_CP023808 position: 2786644-2786672, mismatch: 1

tcggttgacttgtcccactactttgtaca	CRISPR spacer
tcggttggcttgtcccactactttgtaca	Protospacer
*******.*********************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023809

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023812

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP023808

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information