CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number	Anti-CRISPR protein number
NZ_CP018938	Bacteroides fragilis strain Q1F2 plasmid Q1F2-p1, complete sequence	0 crisprs	NA	0	0
NZ_CP018937	Bacteroides fragilis strain Q1F2 chromosome, complete genome	2 crisprs	RT,csa3,PrimPol,DEDDh,PD-DExK,WYL,cas3	3	2
NZ_CP018939	Bacteroides fragilis strain Q1F2 plasmid Q1F2-p2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018937_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018937_1

1647823-1647974

Orphan

Consensus_repeat	Method
CACCGATTACTTTTAGTTTTATTGCTGATAAGGTAAATCATCAATCTGTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018937_1

>merge|NZ_CP018937|1|1647823-1647974|CRISPRCasFinder
CACCGATTACTTTTAGTTTTATTGCTGATAAGGTAAATCATCAATCTGTGTCAATCCGTGAATTCAGTGGTGAGATCGCAAGAAGCATTCACCGCAGATTACACCGATTACTTTTAGTTTTATTGCTGATAAGATAAATCATCAATCTGTGT

>NZ_CP018937|1|1|1647823-1647974|CRISPRCasFinder
CACCGATTACTTTTAGTTTTATTGCTGATAAGGTAAATCATCAATCTGTGT	CAATCCGTGAATTCAGTGGTGAGATCGCAAGAAGCATTCACCGCAGATTA
CACCGATTACTTTTAGTTTTATTGCTGATAAGATAAATCATCAATCTGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018937.1\|WP_101604308.1\|1646461_1647781_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|236977
NZ_CP018937.1\|WP_005777012.1\|1654056_1654626_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380313
NZ_CP018937.1\|WP_005776989.1\|1643091_1643769_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	unknown	unknown	gnl\|CDD\|235423
NZ_CP018937.1\|WP_101603086.1\|1645095_1646367_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	unknown	unknown	gnl\|CDD\|235481
NZ_CP018937.1\|WP_005777014.1\|1657633_1658272_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP018937.1\|WP_005805382.1\|1651835_1652237_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP018937.1\|WP_032542406.1\|1641898_1643077_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	unknown	unknown	gnl\|CDD\|235425
NZ_CP018937.1\|WP_005776991.1\|1643785_1644418_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	unknown	unknown	gnl\|CDD\|236457
NZ_CP018937.1\|WP_101603087.1\|1652940_1654029_+\|HpaII-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370560
NZ_CP018937.1\|WP_101603085.1\|1637200_1638418_-\|BamA/TamA-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|366466
NZ_CP018937.1\|WP_101603088.1\|1654741_1657591_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP018937.1\|WP_101604309.1\|1652262_1652880_+\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|376491
NZ_CP018937.1\|WP_044300105.1\|1640512_1641865_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	unknown	unknown	gnl\|CDD\|235426
NZ_CP018937.1\|WP_032536128.1\|1650449_1651697_+\|DUF1015-domain-containing-protein	unknown	unknown	gnl\|CDD\|377633
NZ_CP018937.1\|WP_101604307.1\|1638580_1639978_+\|C1-family-peptidase	unknown	unknown	gnl\|CDD\|238328
NZ_CP018937.1\|WP_005820012.1\|1649517_1650438_+\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240651
NZ_CP018937.1\|WP_005776999.1\|1648356_1649424_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_CP018937.1\|WP_022012710.1\|1658291_1658966_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP018937.1\|WP_101603084.1\|1636315_1637065_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|367035
NZ_CP018937.1\|WP_005776993.1\|1644446_1645073_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	unknown	unknown	gnl\|CDD\|235074

Protein	Function_ID	Function_description	E-value
NZ_CP018937.1\|WP_101604308.1\|1646461_1647781_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|236977	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional.	8.07528e-96
NZ_CP018937.1\|WP_005777012.1\|1654056_1654626_+\|nitroreductase-family-protein	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	1.09632e-38
NZ_CP018937.1\|WP_005776989.1\|1643091_1643769_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-C	gnl\|CDD\|235423	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional.	3.27317e-82
NZ_CP018937.1\|WP_101603086.1\|1645095_1646367_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F	gnl\|CDD\|235481	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional.	0
NZ_CP018937.1\|WP_005777014.1\|1657633_1658272_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	1.24961e-71
NZ_CP018937.1\|WP_005805382.1\|1651835_1652237_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	1.14377e-48
NZ_CP018937.1\|WP_032542406.1\|1641898_1643077_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B	gnl\|CDD\|235425	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional.	0
NZ_CP018937.1\|WP_005776991.1\|1643785_1644418_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D	gnl\|CDD\|236457	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated.	4.89857e-117
NZ_CP018937.1\|WP_101603087.1\|1652940_1654029_+\|HpaII-family-restriction-endonuclease	gnl\|CDD\|370560	pfam09561, RE_HpaII, HpaII restriction endonuclease. This family includes the HpaII (recognizes and cleaves C^CGG) restriction endonuclease.	0
NZ_CP018937.1\|WP_101603085.1\|1637200_1638418_-\|BamA/TamA-family-outer-membrane-protein	gnl\|CDD\|366466	pfam01103, Bac_surface_Ag, Surface antigen. This entry includes the following surface antigens; D15 antigen from H.influenzae, OMA87 from P.multocida, OMP85 from N.meningitidis and N.gonorrhoeae. The family also includes a number of eukaryotic proteins that are members of the UPF0140 family. There also appears to be a relationship to pfam03865 (personal obs: C Yeats). In eukaryotes, it appears that these proteins are not surface antigens; S. cerevisiae YNL026W (SAM50) is an essential component of the Sorting and Assembly Machinery (SAM) of the mitochondrial outer membrane. The protein was localized to the mitochondria.	7.57346e-10
NZ_CP018937.1\|WP_101603088.1\|1654741_1657591_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP018937.1\|WP_101604309.1\|1652262_1652880_+\|YigZ-family-protein	gnl\|CDD\|376491	pfam01205, UPF0029, Uncharacterized protein family UPF0029.	1.1945e-50
NZ_CP018937.1\|WP_044300105.1\|1640512_1641865_+\|Na(+)-translocating-NADH-quinone-reductase-subunit-A	gnl\|CDD\|235426	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional.	0
NZ_CP018937.1\|WP_032536128.1\|1650449_1651697_+\|DUF1015-domain-containing-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	0
NZ_CP018937.1\|WP_101604307.1\|1638580_1639978_+\|C1-family-peptidase	gnl\|CDD\|238328	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC). The proteins of this subfamily contain a large insert relative to the C1A peptidase (papain) subfamily. BH is a cysteine peptidase that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. Bleomycin, a glycopeptide derived from the fungus Streptomyces verticullus, is an effective anticancer drug due to its ability to induce DNA strand breaks. Human BH is the major cause of tumor cell resistance to bleomycin chemotherapy, and is also genetically linked to Alzheimer's disease. In addition to its peptidase activity, the yeast BH (Gal6) binds DNA and acts as a repressor in the Gal4 regulatory system. BH forms a hexameric ring barrel structure with the active sites imbedded in the central channel. The bacterial homolog of BH, called pepC, is a cysteine aminopeptidase possessing broad specificity. Although its crystal structure has not been solved, biochemical analysis shows that pepC also forms a hexamer. .	0
NZ_CP018937.1\|WP_005820012.1\|1649517_1650438_+\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240651	cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	5.09502e-105
NZ_CP018937.1\|WP_005776999.1\|1648356_1649424_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP018937.1\|WP_022012710.1\|1658291_1658966_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	3.58772e-65
NZ_CP018937.1\|WP_101603084.1\|1636315_1637065_-\|TolC-family-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	5.21858e-06
NZ_CP018937.1\|WP_005776993.1\|1644446_1645073_+\|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E	gnl\|CDD\|235074	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional.	3.1077e-102

>NZ_CP018937.1|WP_101604308.1|1646461_1647781_+|DEAD/DEAH-box-helicase
MNGLKDILERLKIEQLNPMQEASIEAFNKGGEDLILLSPTGSGKTLAFLLPLVGSLRADVKGVQAVVLVPSRELALQIEQVFKAMGTEFKAMSCYGGRPAMEEHRTMKGMQPEVIIGTPGRMNDHLSKQNFDASTVSLLVIDEFDKCLEFGFQEEMATVIGQLPDLKRRFLTSATDAEEIPQFTGLNRTIKLDFLTNDVEESRLRLMKVVSPAKDKIETLYKLLCTLGSSSSIVFCNHRDAVDRVSALLTEKGVSNERFHGGMEQPDRERALYKFRNGSCPVLVSTDLAARGLDIPEVEHIIHYHIPVNEEAFTHRNGRTARWDATGTSYLILNPEERVPDYIPSELDIFDLPENAPRPSKPQWITIYIGKGKKDKLSKIDIAGFLYKKGNLAREDVGAIDVKDHYAFVAVRRSKVKQLLTLIRGEKIKGMKTVIEEAD
>NZ_CP018937.1|WP_101603086.1|1645095_1646367_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-F
MTSLILASIGVFLVVIILLVIILLVAKSYLSPSGEVTITMNGEQQLKTSQGGTLLGTLSANNVFLSSACGGKGSCGQCRCQVLEGGGEILPTETGFFSRKEQADHWRLGCQVKVKQDMSIKIDESILGVKEWECEVISNKNVATFIKEFIVALPPGEHMDFLPGSYAQIKIPTFSMDYDKDIDKSLIGDEYLPAWEKFGLLGLKCRNDEPTIRAYSMANYPAEGDRIMLTVRIATPPFKPKDQGPGFMDVMPGIASSYIFTLKPGDKVTMSGPYGDFHPILDSKNEMMWIGGGAGMAPLRAQIMHLTKTLHITDRTMNYFYGARALNEVFYLEDFLQIEKDFPNFKFHLALDRPDPAADAAGVKYTAGFVHNVIYETYLKNHEAPEDIEYYMCGPGPMSKAVEKMLDDLGVPAKNLMFDNFGG
>NZ_CP018937.1|WP_005776993.1|1644446_1645073_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-E
MEQLLSLFVRSIFVDNMIFAFFLGMCSYLAVSKNVKTAVGLGIAVTFVLIVTLPVNYLLQTKVLAANAIIEGVDLSFLSFILFIAVIAGIVQLVEMVVERFSPSLYASLGIFLPLIAVNCAIMGASLFMQQRITMDPSNPQAITGVGSAVVYALGSGIGWLLAIVGLAAIREKMAYSDVPAPLKGLGITFITVGLMAMAFMCFSGLKL
>NZ_CP018937.1|WP_005776991.1|1643785_1644418_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-D
MSQLFSKKNKEVFATPLGLNNPVTVQVLGICSALAVTAKLEPAIVMGLSVTVITAFSNVVISLLRKTIPNRIRIIVQLVVVAALVTIVSEVLKAFAYDVSVQLSVYVGLIITNCILMGRLEAFAMANGPWESFLDGVGNGLGYAKILIIVAFFRELLGSGTLLNFRIIPEAFYKMGYINNGLMLMPPMALIICACIIWYQRSRCKELQEK
>NZ_CP018937.1|WP_005776989.1|1643091_1643769_+|Na(+)-translocating-NADH-quinone-reductase-subunit-C
MNTNSNSYTIIYASVMVVIVAFLLAFVSSSLKAIQNKNQELDTKKQILAALNIRDVKDADAEYNKYVKGDMLMNVDGTLTENTDGFSISYEKEAKENNRLHVFVCDVDGETKYVVPVYGAGLWGAIWGYVALNADKDTVYGVYFSHASETPGLGAEIATTAFQGEFSGKKVLKDGQVALAVEKNGKVTDPAYQVDGISGGTITSKGVDAMIKACLSQYDKFLTNN
>NZ_CP018937.1|WP_032542406.1|1641898_1643077_+|NADH:ubiquinone-reductase-(Na(+)-transporting)-subunit-B
MKALRNYLDKIKPNFEEGGKLHAFRSVFDGFETFLFVPNTTSKSGAHIHDSIDSKRIMSIVVISLIPALLFGMYNVGYQHFTHTGAQGGFIEMFIYGFLAILPKIIVSYVVGLGIEFVVAQWKKEEIQEGFLVSGILIPMIVPVDCPLWILAIATAFAVIFAKEVFGGTGMNVFNVALVTRAFLFFAYPTKMSGDAVWVAQDSIFGLGNTVDGLTAATSLGVASTATDPNGFPAFSWDMVTGLIPGSIGETSVIAILIGAAILLWTGIASWKTMLSVFVGGAFMGWIFNAVGPDTAMAHMPWYEHLVLGGFCFGAVFMATDPVTSARTETGKYIFGFLIGAMAIIIRVLNPGYPEGMMLAILLMNIFAPLIDYCVVQSNIKLREKRAIKSNN
>NZ_CP018937.1|WP_044300105.1|1640512_1641865_+|Na(+)-translocating-NADH-quinone-reductase-subunit-A
MANVIKLRKGLDINLKGKAAEELSTVKEPGFYALVPDDFPGVTPKVVVKEQEYVMAGGPLFIDKNHPEVKFVSPVSGVVTSVERGARRKVLNIVVEAAAEQDYEEFGKKDVSKLDGEAVKAALLEAGMFAFMRQRPYDVIADPTVAPRAIFISAFDSNPLAPDFEFALKGEEANFQTGLDALAKIAKTYLGISSKQKTTALTQAKNVTVTVFDGPNPAGNVGVQINHVAPVVKGETVWTIGAEAVIFIGRLFNSGRVDLTRTVAVTGSEVLKPAYCKLKVGALLTNVFAGNVTKDKELRYISGNVLTGKQVKPNGFLGAFDSQLTVIPEGDDIHEILGWIMPRFNQFSVNRSYFSWLMGNKKEYVLDARIKGGERHMIMSGEYDKVFPMDILPEFLIKAIIAGDIDRMEALGIYEVAPEDFALCEFVDSSKLELQRIVRAGLDMLRAEMM
>NZ_CP018937.1|WP_101604307.1|1638580_1639978_+|C1-family-peptidase
MNKRILSVFVLSAAFLSVYAQQDKGGISPEMLNRIKQNYQGTTTDKAIRNAIGNNDIRKLALNQDNLKGMDTHFSIKVDSKGITDQKSSGRCWLFTGLNVMRAKAIARYGLGSFEFSQNYNFFWDQLEKTNLFLQGVIDTREKPMDDKMVEWLFRNPLSDGGTFTGVADIVSKYGLVPKEVMPETNSSENTSRMAGLIAEKLREFGLQLRDQAAKGDKLPALENSKTEMLGTVYRMLVLNLGVPPTEFTWTRKDEKGNPVETAQYTPMSFLEKYGDKNLLDNYVMLMNDPSREYYKCYEIDFDRHRYDGRNWTYVNLPADEIKEMAIASLKDSTMMYFSCDVGKFLNSERGLLDVNNYDYASLMGTTFGMDKKQRVQTFASGSSHAMTLMAVDIKDGKPVKWMVENSWGAANGYQGHLIMTDQWFNEYMFRLVVEKKFATPKVLEVLKQKPVRLPAWDPMFAPEE
>NZ_CP018937.1|WP_101603085.1|1637200_1638418_-|BamA/TamA-family-outer-membrane-protein
MKKYIIGILMAIMPATFTVAQEEGTTLSTDTTNQDSIPTLSKRELRRQRVARRNLHYNILGGPSYTPDFGLLIGGSGLMTFRMNPSDTTQQRSVVPVAIALMFNGGLNLFSKPQLFFKGDRFRIFGQFSYKNTQENFYGIGYSTNKDYVRSDTTSQYRYSGLQINPWFLFRLGESNFFAGPQVDLNYDHMYDPAKYLVDQPSYKAAGGTEKGYKNFSSGVGFLLTYDTRDVPANAYRGMYLDFRGMMYQKFLGSDNNFYRLEIDYRQYKTLRKRGVLAWTAQSKNVFGDVPLNKYALSGTPFDLRGYYMGQYRDKSSHVVMAEYRQMINTDKGNWVKRMLSHVGYVAWAGCGFMGPNPGKIEGVLPNMGVGLRIEVQPRMNVRLDLGRNMVNKQNLFYFNMTEAF
>NZ_CP018937.1|WP_101603084.1|1636315_1637065_-|TolC-family-protein
MKRILFIFISIPLLLFGAASLVYAQETSDYSKLTTEDYTNISLPPLDLLFENAKGGPIYELAGVKEQIERKLLAKERRAFLKFFSARGSYQWGKVGVDNTFTDVSTPIMYNYNTSKQTMYTIGGAVSIPFDELFDLSPRVKRQKLNVKAAALEREVKFEEMKREIIEMYATATSQLNVLKLRAEALELATMQYDVAEKNFVNNTINTGDLSTEKQRQSTALEAFEKSKFEVTKSLMILEVITRTPILRK
>NZ_CP018937.1|WP_005776999.1|1648356_1649424_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MKKHNFSAGPSILPREVIEETAKAILDFNGSGLSVLEVSHRGKDFQAVMDEAVALFKEILNIPEGYSVLFLGGGASMQFCMVPYNFLEKKAAYLNTGVWAKKAMKEAKGFGEVVEVASSADANYTFIPKDFTIPADADYFHVTTNNTIYGTELKGDLDSPIPMVADMSSDIFSRPVDVSKYICIYGGAQKNLAPSGVTFVIVKDDAVGKVSRYIPSMLNYKTHIDGGSMFNTPPVLPIYSAMQTLRWIKAQGGVKEMDRRATEKADMLYAEIDRNKMFVGTAAKEDRSRMNICFVMAPEYKDLEADFLKFATDKGMSGIKGHRSVGGFRASCYNAMPKESVQALIDCMQEFEKLH
>NZ_CP018937.1|WP_005820012.1|1649517_1650438_+|3-phosphoglycerate-dehydrogenase
MKVLVATEKPFAKIAVDGIKKEIEGAGFELALLEKYTDKAQLLDAVKDANAIIIRSDIIDAEVLEAAKELKIVVRAGAGYDNVDLNAATAHGVCVMNTPGQNSNAVAELVFGLLVYAVRNFYNGTSGTELMGKKLGIHAYGNVGRNVARIAKGFGMELYAYDAFCPKDVIEKDGVKAVDSAEELYKICNIVSLHIPATAETKNSINCDLLKNMPKGAILVNTARKEVINEDELIQLMEERPDFKYITDIMPAANAKFTELFAGRYFSTPKKMGAQTAEANINAGIAAAKQIVGFLKEGCEKFRVNK
>NZ_CP018937.1|WP_032536128.1|1650449_1651697_+|DUF1015-domain-containing-protein
MATIKPFKGIRPPQDLVEQVASRPYDVLNSEEARAEAAGNEKSLYHIIKPEIDFPVGTDEHDEKVYTKAAENFRLFRDKGWLVQDDKENYYIYAQTMNGKTQYGLVVGAYVPDYMNGVIKKHELTRRDKEEDRMKHVRVNNANIEPVFFAYPDNAVLDTIIRKYTAQKPVYDFIAPGDGFGHTFWVIDDNDDIAVITKEFAAMPALYIADGHHRSAAAALVGAEKAKQNPGHRGDEEYNYFMAVCFPANQLTIIDYNRVVKDLNGLTPAEFLTALEKNFVVEEKGKEIYKPAALHNFALYLEGKWYSLTAKPGTYDDNDPIGVLDVTISSNLILDEILGIKDLRSDKRIDFVGGIRGLGELGRRVDSGEMKVALALYPVSMKQLMDIADTGNIMPPKTTWFEPKLRSGLVIHELE
>NZ_CP018937.1|WP_005805382.1|1651835_1652237_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MGRKEEYKLQNEQFMQALRAEADVYELPCGILYKVLEEGSGTATPRPGSVVSVHYRGTLINGREFDNSWKRNCPEAFRLSEVIEGWQIALQKMRVGDRWIIYIPYTMGYGTRTSGPIPAFSTLVFEVQLLGIA
>NZ_CP018937.1|WP_101604309.1|1652262_1652880_+|YigZ-family-protein
MSEDTYKTITEVSEGTYTEKRSKFIAIALPVRTLEEIKNHLETYQKKYYDARHVCYAYMLGHERKNFRANDNGEPSGTAGKPILGQINSNELTDILIIVVRYFGGIKLGTSGLIVAYKAAAAEAIAAATVVEKTVDEEVTVLFEYPFMNDVMRIVKEEEPEILSQSYDMDCSMTLRIRQSAMPRLRSRLEKVETARILDGEEGNE
>NZ_CP018937.1|WP_101603087.1|1652940_1654029_+|HpaII-family-restriction-endonuclease
MAFEATKREWSELYVFFRLLADGKVSLGTPQAKKEDEKCWPIAMIQREEHDGTRCYYIEGEDIRMEGERVGKSLPREDFATVADLILNAIKGSSTDEVTSPDGVEEFLDEAGIFDLEARTEDRTDFSIAFWHPEAPLAGFNVRSRLSAMNPLLDGGRAANLKLEQSGVKFAAPTVNKINALPESPTEVAERMMMIERLGGVLKYSDVADRVFRCNLLMIDLHFPRVLAEMVRTMHLDGITRISELTELMKTVNPLKIKEELISKHGFYEFKMKQFLLALALGMRPAKIYNGTDSAVEGILLVDGSGEVLCYHKSEKKTFEDFLYLNSRLEKGSVDKDKYGFLERENGVYYFKLNAKIGLIKR
>NZ_CP018937.1|WP_005777012.1|1654056_1654626_+|nitroreductase-family-protein
MKTNEVLETIKARRSVRVYDKKQVPSEDLNAILEAATYAPSGMHYETWHFTAVRNAAKLEELNNRIKEAFAKSDDKRLQERGHSETYCCYYHAPSLVIVSNDPTQWWAGMDCACAIENMFLAARSLGIGSCWINQLGTTCDDPEVRAYLTSLGVPENHKVYGCVALGYQAEGVSLKEKTVKEGTITIVE
>NZ_CP018937.1|WP_101603088.1|1654741_1657591_-|aminomethyl-transferring-glycine-dehydrogenase
MKTDLLACRHIGVNKADAEVMLRKIGVGSLDELIDKTIPANIRLKAPLALPAPMTEYEFARHIAELASKNKLFTTYIGMGWYNTITPAVIQRNVFENPVWYTSYTPYQTEVSQGRLEALMNFQTSVCDLTAMPLANCSLLDEATAAAEAVTMMYALRSRNQQKSGANVVFIDENIFPQTLAVITTRAIPQGIEIRTGKFHELEFTDDLFACVLQYPNANGNAEDYREFTEKAHAANCKVAVAADILSLALLTPPGEWGADIVFGTTQRLGTPMFYGGPSAGYFATRDEYKRNMPGRIIGWSKDKYGKLCYRMALQTREQHIKREKATSNICTAQALLATMAGFYTVYHGQEGIRNIASRIHSIAAFLEKNIGKLGYKQVNKQYFDTLRFILPDSISAQQIRTIALSKEVNLRYFDNGDVGLSIDETTDIAAVNILLSIFAIAAGKDFQKVDDVPETSTICKELKRQSPYLTHEVFSKYHTETEMMRYIKRLDRKDISLAQSMISLGSCTMKLNAAAEMLPLSCSEFMCMHPLVPEDQAAGYRELIHNLSEELKVITGFAGVSLQPNSGAAGEYAGLRTIRAYLESIGQGHRNKVLIPASAHGTNPASAIQAGFTTVTCACDEHGNVDMDDLRAKAEENKEDLAALMITYPSTHGIFETEIVEICQIIHDCGAQVYMDGANMNAQVGLTNLGFIGADVCHLNLHKTFASPHGGGGPGVGPICVAEHLVPFLPGHGLFGNSQNEVSAAPFGSAGILPITYGYIRMMGTEGLTMATKIAILNANYLAACLKDTYGIVYRGANGFVGHEMILECRKVYEETGISENDIAKRLMDYGYHAPTLSFPVHGTLMIEPTESESLAELDNFIHTMLTIWNEIQEVKNGEADKGDNVLINAPHPEYEVVSDRWEHCYTREKAAYPIESVRENKFWVNVARVDNTLGDRKLLPTCYGCFD
>NZ_CP018937.1|WP_005777014.1|1657633_1658272_-|MBL-fold-metallo-hydrolase
MKIKRFEFNMFPVNCYVLWDETNEAVVIDPGCFYDEEKQALKNFIVTNHLNVKHLLNTHLHLDHIFGNPFMLREFGLSAEANQADEYWIDEAPKQSRMFGFQLNEAPVPLGKYLHDGDIITFGNTTLEAIHVPGHSPGSLVYYCQAENCMFSGDVLFQGSIGRADLTGGNFDELKEHICSRLFVLPNETIVYPGHGAPTTIGIEKAENPFFR
>NZ_CP018937.1|WP_022012710.1|1658291_1658966_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MDTTEQTSSLPSTGGETGVELLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFRPGSKVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEEKQTFDFVVSRAVMPLADLIKIIRKNISSKQQNALPNGLICLKGGELEHEAMPFKHKTTMHSLSEDFDEEFFQTKKVVYVTI

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Crispr_ID: NZ_CP018937_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018937_2

3287260-3287352

Orphan

Consensus_repeat	Method
CCTGAACGGTACAGCCGAAGCCTTGCAGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018937_2

>merge|NZ_CP018937|2|3287260-3287352|CRISPRCasFinder
CCTGAACGGTACAGCCGAAGCCTTGCAGGATATAAGCGTTTACGCACGTGAATGTAAAGCATACCTGAACCGTACAGCCGAAGCCTTGCAGGA

>NZ_CP018937|2|2|3287260-3287352|CRISPRCasFinder
CCTGAACGGTACAGCCGAAGCCTTGCAGGA	TATAAGCGTTTACGCACGTGAATGTAAAGCATA
CCTGAACCGTACAGCCGAAGCCTTGCAGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018937.1\|WP_080546292.1\|3297418_3298462_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381615
NZ_CP018937.1\|WP_101603515.1\|3296963_3297389_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018937.1\|WP_101603510.1\|3281384_3281588_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018937.1\|WP_005780973.1\|3284426_3285113_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319817
NZ_CP018937.1\|WP_032531628.1\|3298499_3299399_+\|ion-transporter	unknown	unknown	gnl\|CDD\|366146
NZ_CP018937.1\|WP_080714575.1\|3280277_3280541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018937.1\|WP_101603513.1\|3293032_3296767_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226220
NZ_CP018937.1\|WP_101603511.1\|3291386_3292895_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|367035
NZ_CP018937.1\|WP_005780969.1\|3283114_3283864_+\|subclass-B1-metallo-beta-lactamase-CfiA14	unknown	unknown	gnl\|CDD\|293860
NZ_CP018937.1\|WP_005780971.1\|3284090_3284417_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP018937.1\|WP_032531630.1\|3305380_3305752_-\|DUF2809-domain-containing-protein	unknown	unknown	gnl\|CDD\|378530
NZ_CP018937.1\|WP_005780917.1\|3282329_3282962_+\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP018937.1\|WP_032541803.1\|3281886_3282333_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP018937.1\|WP_032541806.1\|3287426_3288257_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|372499
NZ_CP018937.1\|WP_005780981.1\|3288597_3289380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018937.1\|WP_065739494.1\|3299388_3305262_-\|DUF3320-domain-containing-protein	unknown	unknown	gnl\|CDD\|379066
NZ_CP018937.1\|WP_065739492.1\|3285241_3286126_+\|protein-involved-in-catabolism-of-external-DNA	unknown	unknown	gnl\|CDD\|225509
NZ_CP018937.1\|WP_005780983.1\|3289703_3291350_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379862
NZ_CP018937.1\|WP_005780977.1\|3286322_3287198_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372499
NZ_CP018937.1\|WP_005780965.1\|3280796_3281072_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018937.1\|WP_080546292.1\|3297418_3298462_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381615	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	4.34143e-62
NZ_CP018937.1\|WP_032531630.1\|3305380_3305752_-\|DUF2809-domain-containing-protein	gnl\|CDD\|378530	pfam10990, DUF2809, Protein of unknown function (DUF2809). Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.	3.36254e-24
NZ_CP018937.1\|WP_005780973.1\|3284426_3285113_-\|HAD-family-hydrolase	gnl\|CDD\|319817	cd07515, HAD-like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.00878e-48
NZ_CP018937.1\|WP_032531628.1\|3298499_3299399_+\|ion-transporter	gnl\|CDD\|366146	pfam00520, Ion_trans, Ion transport protein. This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.	6.83568e-33
NZ_CP018937.1\|WP_101603513.1\|3293032_3296767_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	6.6577e-158
NZ_CP018937.1\|WP_101603511.1\|3291386_3292895_-\|TolC-family-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	1.54609e-19
NZ_CP018937.1\|WP_005780969.1\|3283114_3283864_+\|subclass-B1-metallo-beta-lactamase-CfiA14	gnl\|CDD\|293860	cd16302, CcrA-like_MBL-B1, Bacteroides fragilis CcrA and related metallo-beta-lactamases, subclass B1; MBL-fold metallo-hydrolase domain. MBLs (class B of the Ambler beta-lactamase classification) are a diverse group of metallo-enzymes that are capable of catalyzing the hydrolysis of a wide range of beta-lactam antibiotics. MBLs have been divided into three subclasses B1, B2 and B3, based on sequence/structural relationships and substrates, with the B1 and B2 MBLs being most closely related to each other. This subgroup of MBLs belongs to the B1 subclass. B1 enzymes are most active with two zinc ions bound in the active site, and have a broad-spectrum substrate profile.	2.67925e-125
NZ_CP018937.1\|WP_005780917.1\|3282329_3282962_+\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.3433e-67
NZ_CP018937.1\|WP_032541803.1\|3281886_3282333_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.61085e-41
NZ_CP018937.1\|WP_032541806.1\|3287426_3288257_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	4.92355e-24
NZ_CP018937.1\|WP_065739494.1\|3299388_3305262_-\|DUF3320-domain-containing-protein	gnl\|CDD\|379066	pfam13195, DUF4011, Protein of unknown function (DUF4011). This family of proteins is found in archaea and bacteria. Many members are annotated as being putative DNA helicase-related proteins.	2.79482e-61
NZ_CP018937.1\|WP_065739492.1\|3285241_3286126_+\|protein-involved-in-catabolism-of-external-DNA	gnl\|CDD\|225509	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only].	0.000711314
NZ_CP018937.1\|WP_005780971.1\|3284090_3284417_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	4.55295e-23
NZ_CP018937.1\|WP_005780977.1\|3286322_3287198_+\|hypothetical-protein	gnl\|CDD\|372499	pfam13149, Mfa_like_1, Fimbrillin-like. A family of putative fimbrillin proteins found by clustering human gut metagenomic sequences. Analysis of structural comparisons shows this family to be part of the FimbA (CL0450) superfamily of adhesin components or fimbrillins.	6.70706e-13
NZ_CP018937.1\|WP_005780983.1\|3289703_3291350_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	9.86387e-87

>NZ_CP018937.1|WP_005780977.1|3286322_3287198_+|hypothetical-protein
MKKLMFAVIACAMALSGCSSEDDCTTVNPQPEENATEIKLNAGILGVATRAPVSTNDNITASFVASTTDGDYTTNAWNSTVTFVASPTPTSALSFSPARYYPVNSSTIYIKGYYPAGTLTGKSVTLAADGTEDVMITAQASGTKATATPLSFIFNHLLTQLQFKFVSGTGYPASGVNVTSLVIKQQKAPATLDLNTAAMTYTTKDLTLSGTFPITTAGATVSNYPMVKSGEALSVAVTTSDGVTYPETAISITTEAGKSHLITLTFTPKEITAAISVTAWQVGGQGSSSLQ
>NZ_CP018937.1|WP_065739492.1|3285241_3286126_+|protein-involved-in-catabolism-of-external-DNA
MTYTHFGKQADVLKHLLLCELLRIEKPRVYVETNAACAQYALEKTPEQEYGIYHFLKKAGTAGKECIPERAEYHHPKGALHRSAYYQQESEAMQANRYIGSPGLAMNILGDTARYIFFDIESEPLENVSQYAATKGLKECINLFNRDSIEGTLELLSSLPASSFFHIDPYEIDKPGRNGRTYLDVFTEAAKAGMRCFLWYGYMTLEDKRHLEELIAQSLPEANIRNATGVELTLKMIKEDIAESNPGVLGSGVLGANLSEESNAVIQKYAAWLEEIYKDAKYKNLDGSVYLTQR
>NZ_CP018937.1|WP_005780973.1|3284426_3285113_-|HAD-family-hydrolase
MQEIKVIAFDADDTLWDNQVFYDEVESEFCRLLSEYGTAEEISSRLFDIEMENMDIYKYGAKPFTLSMVEAAVTISRNRVPAEVIGRIVEMGKELLEMPIRLLGGVTEALETLKDDYKLVVATKGDLLDQERKLQRSGIAHYFDHTEIMTDKAPEDYQRLISSLDVAPQSFLMVGNSLKSDVLPVLSLGGQAIHVPAEAMWKHEEIHPSGKEYLMIRSLAELPEVLRG
>NZ_CP018937.1|WP_005780971.1|3284090_3284417_+|multidrug-efflux-SMR-transporter
MNWIILTIAGCFEVLFTFCMGKVKETTGTEMYLWFTGFLIATFISMLLLVKATQNLPIGTAYAVWTGIGAVGTVLVGILVFREPASFWRLFFIVMLISSIIGLKMVSH
>NZ_CP018937.1|WP_005780969.1|3283114_3283864_+|subclass-B1-metallo-beta-lactamase-CfiA14
MKTVFILISMLFPVAVMAQKSVKISDDISITQLSDKVYTYVSLAEIEGWGMVPSNGMIVINNHQAALLDTPINDAQTETLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQKKGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP
>NZ_CP018937.1|WP_005780917.1|3282329_3282962_+|CatB-related-O-acetyltransferase
MNAKTYPRTNDSQTIYLNTVIRNPNITVGDYTIYNDFVNDPTLFEKNNVLYHYPINGDRLIIGKFCSIACGAKFLFNSANHSLKSLSGYTFPLFFEEWDLDKKDVASAWDNKGDIVIGNDVWIGYEAVIMAGVHIGDGAIIASRAVVTKDVPPYTIVGGTPAKEIRPRFDRETILRLQNLRWWDWEVEKIRQALPAIMKGDIEGLAAVAG
>NZ_CP018937.1|WP_032541803.1|3281886_3282333_+|GNAT-family-N-acetyltransferase
MEIKKLTQSEKRMAMDLAWEVFIEFEGPDYPQEGTDHFRSFIDNTEMVGEMEVYGAFDGNILAGMIALRSSGSHISLFFVRKTYQQRGIGKRLFETAIRNGHAETITVNSSPYAVGIYHKLGFTAVAGEKTENGIRFTPMEYKSELKS
>NZ_CP018937.1|WP_101603510.1|3281384_3281588_-|hypothetical-protein
MDISNFLSVYLSKSISFPLLSLVQMVGFLSQPGHAGLSARVCGLISLGMWAHQPGYAGWDKELYDNG
>NZ_CP018937.1|WP_005780965.1|3280796_3281072_+|hypothetical-protein
MSFSGFVFDMIRRNKENRDLLTLRRERMKDLQGKMYRKGTLQNPNITVEELEKIEKATREKEKAETQYYLRSTLIFLAVLAVLALLLWWIF
>NZ_CP018937.1|WP_080714575.1|3280277_3280541_+|hypothetical-protein
MIMSDFIRKPSDKLTSNERKELDTSEFGIPELREFPIHDAAHVRAAEAYFRYAPEEYKAQLARNILAKAHLFGVNVKSPTILEWAEK
>NZ_CP018937.1|WP_032541806.1|3287426_3288257_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MKQALLTLMGWMLLSQGCSYGVADDCLPPEEPVPIRMAIAEEKLPTRAPVTTIDASNLSSVGIYAVREGSTAGQYPWTPTPFALNLTPSGISGNQISFNPKLYYPLGGKRVIFYGYYPRTTTTATTGNNYITAPDNGIAPTYHFTLTGTEDVMYAVSTPTGSTSTSPVSLTFNHVLTQLRLNTSLLGSLSGIKLVGVSNKGTLNIGSGAVTYDSSVTDIALTIPLLGSVTDAVMVPAGVASYKVEVVLLLSLLKRTYLVKPTSGTFQPGVIYTISL
>NZ_CP018937.1|WP_005780981.1|3288597_3289380_-|hypothetical-protein
MTKKHRKESLDALFREKVLLEMLKVAGVGMWTYSTETGKLRYIGFADTIHRHDELQYVDPLDYLKLMNGEDAQIVTQFMAALHAGRPPQEGIRYKVHGNGEDFYLENHVVTCQPLGNGFYYLKGYVKNITAQVMEMNRLHIGKERTEQADRLRSAFFSHVSRELRGPLQAMEELASRMVNAGSREEREECFRQIQESKRAAMKMADALHTVSQLPASTYEPYHSPMRLCLMYRDLLAENGCIHNSEDGEQEANFLSLLFS
>NZ_CP018937.1|WP_005780983.1|3289703_3291350_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKISDILRKKQVLYPLIAFAGFILGWLLFSPSSSSGTTEGILSEPPIHDTHGSSHDLVQDESGVWTCSMHPQIRQDKPGKCPICGMDLIPLKKNVASGSDDAIDPNAIRMSEEAMALADVQTTRVSRSNPVKQVRLYGKIIPDERSLQSQTAYVGGRIERLNIEFTGETVRAGQTLATLYSPELFTAQQELLEAIHMQQPALVQAAREKLRLWNLTDAQIDAIRDSGQASPMVEIKSNTSGIVIAKRINQGDYVSQGSVLFDIANLSHVWAVFDAFEADLPFLTKGDLVEFTLSAFPGKKFSGRISFIDPIINATTRTARVRVDVANSAQEMKPEMYATARVFAPLKGYKDQIIVPQTAILWTGKRAVVYVRQPGTDIPTFLMREITLGPSLGGAYVVLDGLSDGEEIVTNGVFSIDASAQLEGKRSMMNENGSGTAPMVGHGGHNMSGTHDSHAGSQNNEHTMFTVHGSCGMCKERIETAAKRVPGVRTADWDQEKQMIHLQFDPSKTSADAVAKAIAKVGHDTDKYKADKAVYDTLPGCCKYRDK
>NZ_CP018937.1|WP_101603511.1|3291386_3292895_-|TolC-family-protein
MMNRKYKYPLVIAINILLCPAVIPVSARQFASPTEGQQPVDSLSVYLEQAARNNPQVNADFMLYKASLEKIPQAGAFSDPELEIGLFIKPMETLMGKQVADFTLMQMFPWFGTRKAARGEASEMARMAYEQFRDTRNNLWYEVKAQWYQLCNLNEQYRTMKTNIHLLCQLEQLALNRFSASSAQATSLSVSSSSAAAKSISSMPLASASGNDMAGMGGMGNAASAIASGTSIGTSSGGMSGMGGGSMGSTATGSMSDVLRIQMERAELEDNLATLQSARLTAEARFNALLNRPSDVPVHVPDSLTQRFYRIDEHILIDSILTHNPMITMLEAEGEAFRAKAKMERRMSYPMIGIGLQYSLVNKVADPMGMPDMNGKDMVMPMLKISLPLFRRKYNAQQRESHNYRVASELKRDNIQNQLQAEYINVRQQLDDAARKVLLYEQQYSLSLSTWQLMVREFSAGRQSLTDVIQVERQMLDYKLKKSEAIAAYNTMVAAMEKLIAR
>NZ_CP018937.1|WP_101603513.1|3293032_3296767_-|efflux-RND-transporter-permease-subunit
MINKIIRYFLENRVITMLLLALVVVWGVSTAPFNWHGGIVPRNPIPVDAIPDIGDNQQIVATEWMGRSPKDIQDQITYPLTTSLLGIPGVKTIRSSSMFGMSFIYIIFEDDIEFYWSRSRILEKLNSLPPGTLPEDVQPTLGPDATALGQIYWYTLEGRDPKTGRPTGGWNAEELRTIQDFYVKYSLSAAEGVSEVASAGGFVKEYQLELNPDAMYSFNVSVMDVMNAVKKSNLDIGAETMEVNKVEYLIRGLGYVKNVADIENTVVTVREGVPVRISDIAFVNIGPGTRRGGLDKEGVEAVGGVVIARYGSNPLEVIDNVKEKIHEMDAGLPQKTLADGTVSKVTVVPFYDRTGLIKETIGTLESSLSHEILICIIVIIVLVLNLRASVVIASMLPIAVLATFILMRYTGIEANIVALSGIAIAIGVMVDVGVVFVESIIRYMEMPENRGITKGKALAGLIYKAVSEVSGAIATAMITTIVSFLPVFAMQAQEGKMFSPLAYTKTYALASAFVLGLILLPTLAYFLFSVRIDSKMIRRGMNYVLIGMGVALCSIYGSIPALGLTAVGVNNLLAGRWKNSKIANYVNIAIALLVALFYLSEEWLPMGPARGLTVNVLFVAGCVAIILAMLWALVIFYERILRWCLANRWKFMMIPVATVVCGFFIWRGVGQEFMPSLNEGSFLLMPTSMPHAGIEQNLDYVEKLDKRLAAIPEVETAIGKWGRVNSALDPAPVQMFENTINYRPEYILDEDGRRARFRVDGDGAFVLKDGGTYNPADGFRLLPADSLVADPRGDYFRQWRPEIKNANDIWQQIVNVTHLPGLTSAPKLQPIEARLVMLSTGMRAPMGVKVYGPTLEDIEQGGKLIEQALKSSPSVIPSSVFYDRAVGAPYLEIKLNRESMARYGVAVGDLQEVLGAAVGGMALTRTVEGRERFPIRLRYARELRDSPEALSMLLVPTATGAQVPLKELADIEYSRGAQMIQSENTFLVGYVIFDKLSGRAEVDVVHEAGAMLDAKVKSGELVLPKGVSYKFAGNYEQQQRATDRLMIVVPLALLIVLLVLYFQFRTVTASLIHFSGVFVAFAGGFILLWLYGQPWFMNFSIVGENMRDLFQMHPINLSVAVWVGFIALFGVATDDGVLMGTYIHHVFLERDPRTRHDIREAVVEAGLKRVRPAAMTTATTLIALLPVLTSTGKGADIMVPMAIPTFGGMLIQSMTMFVVPVLQCWWREAVERRREKKRKGAYGE
>NZ_CP018937.1|WP_101603515.1|3296963_3297389_-|hypothetical-protein
MSIPILIFATSKTHMKKFILIILTLLYAVVSSGITVNVHYCMGRMADVEWGSASACTMCGQKKTSDCCKDEAHYIKLAVDQDVNHVVVMNLVPVVTELLPVLYAGFLSLEVEDTCQSFIAFDSPPKQTGVPLFVYHCTYLI
>NZ_CP018937.1|WP_080546292.1|3297418_3298462_+|lytic-transglycosylase-domain-containing-protein
MNILFGLILLVIFTPPTNKKTVMKHISINYIFTTALALGAGISIPVLVGSTCLSEQHSVQSEVPYCVTPPTVPEQAIFDGDTIDLRRYDRRERMDREMMSFTYMHSTTMLMLKRANRYFPIIEPLLKANGIPDDFKYLMVIESSLNPIARSPAGAAGLWQFMPATAREFGLEVNDNVDERYHIEKATAAACRYFKQAYAKYGDWMAVSAAYNAGQGRISSQLDKQLADHAMDLWLVEETSRYMFRLLAVKEVFGNPQRFGFLLKREHLYPVIPYKEVTVNTEISDLSDFAQKQGITYAQLRDANPWLRGSSLKNKTGKKYVIHIPTQEGMNYDPKKTVPYERKWVID
>NZ_CP018937.1|WP_032531628.1|3298499_3299399_+|ion-transporter
MKSDSWLYRFLHNQALKRKLYVIIFESDTPAGKAFDVALIICILLSILLAIIESLQGLPSWLSTPFIVLEYLFTAFFTFEYVTRIYCSPQPQKYIFSFFGIIDLLATLPLYLAFFLPGARYLLIIRAFRIIRVFRIFKLFNFWLEGERLLTSLKESSKKIAVFFLFVVILVVAIGTLMYMIEGTQPNTQFNNIPNSIYWAIVTMTTVGYGDITPATALGKFLSACVMLIGYTIIAVPTGIVSVSMMKEYKKLKDLQCPNCHKTGHEENATYCKYCGHKLKNEETPQQESQTNGPRRTTS
>NZ_CP018937.1|WP_065739494.1|3299388_3305262_-|DUF3320-domain-containing-protein
MSQENPSSKLDVEFIYLPVVNYSMQQNRIPVVRLFSIKNNTEHPLADLKVSLIFEPEFAAASPVMIERLSPGEMIKITTLNLLLDPSFFIRQTERFSGAIGLIVSCDEEVVFQSKYPIDILAFDQWGGIQVLPELLSAFVVPNHPILTGIISRTASILKEWSGSSSLDAYQSCNPNRVKIQLAALYEAVKEQHIAYCTPPASFGDAGQRIRLSDNVLSGKLGTCLDMSLLYASCAEAMGLHPLLVVIQGHALVGCWLIDGTFPDAVNDDPSLLTKRTADGINEIILLEATCMNDGQNVTFDAAVGLANGKMLAVNDFICFIDVARSRFAHILPLPQRIMHGKAWIVNPEMIQTPEDESHVSYSNAPEEIKQYDWGNQDCYVEVTKQLLWERKLLDLSLRNNFLNLRITRNALQVISADVDKMEDAFSDGTEFQILGKPSDWDNPLYDFGLYGALTESDPMLGLIKQELTQKRLRTYLNEQDLKKSLTYLYRSSRVALEENGANTLYLALGLLRWYETEHSERPRYAPILLLPVEMIRKSVSKGYIIRAREEESMLNITLLEMLRQNFGITISGLESLPKDENGADVKRVFSIFRKAVMNEKRWDVEEQAILGTFSFSKFIMWNDIHSNAEELSKNKIVGSLMSGKMEWEVADVDASAIELDHTLTPADIALPVSADSSQLEAVYEAVSEKSFILHGPPGTGKSQTITNIIANALYQGKRVLFVAEKMAALSVVQKRLTNIGLAPFCLELHSNKARKTDVLRQLKESTEIFRYKEPEEFKEESERLFKMRQQINGYVEALHRVYPCGISVYEAVTRYSSIDEKEEIMIPAFLLTTLTKERLNEWNHAVEELVGVGKVSGHSYHHPLTGINIKEYSSQLKEETDKLLKEYITLLQVMEKKVGKCFSIYGIGNKYTEKLLESLVRFIRILMQLPGMTANLVLMTEPNENVEKIRRIIEHGRKRDAVYSLLKQSFEDAFFTFPAQQKLAEWKEITQSWFLPRWLKQRKFCKEMSLFSLQGRIGKEQVLPVLQQLLSYQQEKQEVDSKSSWLQNLFGAKAHSGEEQWADIEAMSEGLLQLNRLLMGLAEDASSVRLVKEKLAEQLSEGYSSFRQMNKEQLEGVVQDWEREKQLEESMLQLLGISKEVLHVSEDNWLAGALHQCEIWAKNTDKLKDWYRWLNVSRRFEACGLESVFTAYTECNLPTERMMNIYLKGFYRSFTEYAIGTEQVLQFFSGELFNDSILRFRELNEQYQELIKKELYAKLASNIPSFVYAAAQSSEVGILQKCIRSNGRGVPIRKLFDSIPNLLPRMCPCMLMSPMSVAQYIDVNHDKFDLVVFDEASQMPTCEAVGAIARGNHVVVVGDPKQMPPTSFFTSNSVDEEHIEMEDLESILDDCLALSMPSKYLLWHYRSKHESLIAFSNSQYYDNKLLTFPSPDDLAAKVTLVSVEGYYDKGKSRQNQAEAQAVVDEIVRRLSDPKLSRQSIGVVTFSSVQQTLIEDMLSDVVMQNADLENLAFNREEPVFIKNLENVQGDERDVILFSVGYGPDINGRVSLNFGPLNRDGGERRLNVAVSRARYEMKVFSTLKADQIDLKKTSSVGVAGLKYFLEYAGKGTGVLNHSNAMASESIDIGTLVASKLRERGYQVKTKIGCSGFRVDVGVVDPDNSSRYLLGILCDGENYRAAKTARDREIVQSSVLKMLGWNICKVWTMDWWENSQKVIDRIEGELEKARCSKSEIPASVSLPVPVLNQGQKAGLLCSAQPCLVNVPEQVIREGVKSVESEIYETASLVSVNLSSWDFMMPRREPRIRKQLDEIMHTEAPISRSLLSNRIFSAYGILRKTARLIAWMDDILSRTPYYKQEVDGLTFYWNTKEEAEAYTKFRIDSKREVADLPPREVANAALSILEQQIALPLTDLMKITAQLLGYARFGLNVETAMRRGVQMLLDREEAKIEGDKILMK
>NZ_CP018937.1|WP_032531630.1|3305380_3305752_-|DUF2809-domain-containing-protein
MNKRLFYLIGFAIILAVEIIIGMYVHDRFVRPYMGDALVVVLIYCFIRIFIPKGLSQLPFYVFAFACFIEVLQYFQLVDVLGITNSVTRIILGSTFDLKDIVSYAGGYVFVLLVERFWGKKGK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

470490 : 535373

uncultured_Mediterranean_phage(20.0%)

transposase,portal,protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101602672.1\|470490_471090_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_101602673.1\|471260_473201_+	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_005775735.1\|473215_474490_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_005818622.1\|474502_475891_+	alpha-amylase	NA	NA	NA	NA
WP_101602674.1\|476111_477599_-	DUF4270 domain-containing protein	NA	NA	NA	NA
WP_005810059.1\|477621_478446_-	glycogen/starch synthase	NA	NA	NA	NA
WP_005818627.1\|478692_479541_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_005775741.1\|479562_479916_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_022012386.1\|480099_482388_-	bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase	NA	NA	NA	NA
WP_080546213.1\|482529_483690_-	glucose/galactose MFS transporter	NA	NA	NA	NA
WP_005810051.1\|483833_485108_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.7e-64	40.3
WP_005775745.1\|485143_485302_-	hypothetical protein	NA	NA	NA	NA
WP_005775747.1\|485264_485534_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_005775748.1\|485557_485875_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_101602675.1\|486678_487347_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_005810046.1\|487394_487910_-	hypothetical protein	NA	NA	NA	NA
WP_005810044.1\|487916_488621_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.9e-20	27.9
WP_101602676.1\|488651_490133_-	hypothetical protein	NA	NA	NA	NA
WP_101602677.1\|490292_493112_-	insulinase family protein	E3T4Q7	Cafeteria_roenbergensis_virus	2.3e-07	24.2
WP_101602678.1\|493267_494071_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.6e-53	45.2
WP_005810037.1\|494086_495013_-	lipid kinase	A0A1V0SBJ0	Catovirus	1.8e-14	26.5
WP_101602679.1\|495303_496230_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_032537439.1\|497644_498289_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_101602680.1\|498299_499853_-	DUF4836 family protein	NA	NA	NA	NA
WP_005810031.1\|499879_500569_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_005775764.1\|500574_501144_-	bifunctional nuclease family protein	NA	NA	NA	NA
WP_032538140.1\|501146_502406_-	nucleoside permease	NA	NA	NA	NA
WP_032532785.1\|503247_503424_+	histone H1	NA	NA	NA	NA
WP_101602681.1\|503803_504025_+	hypothetical protein	NA	NA	NA	NA
WP_101602682.1\|504366_504801_+	hypothetical protein	A0A1B1IRB1	uncultured_Mediterranean_phage	7.5e-19	40.3
WP_101602683.1\|504804_506394_+\|portal	phage portal protein	H7BUJ0	unidentified_phage	6.4e-217	68.2
WP_101602684.1\|506409_507429_+	hypothetical protein	H7BUI9	unidentified_phage	1.6e-112	59.3
WP_005805709.1\|507747_509034_-\|transposase	IS1380-like element IS613 family transposase	NA	NA	NA	NA
WP_005805709.1\|509561_510848_-\|transposase	IS1380-like element IS613 family transposase	NA	NA	NA	NA
WP_004295324.1\|511774_512599_-	class D beta-lactamase OXA-347	NA	NA	NA	NA
WP_005805709.1\|512739_514026_+\|transposase	IS1380-like element IS613 family transposase	NA	NA	NA	NA
WP_101602687.1\|514857_515109_-	hypothetical protein	NA	NA	NA	NA
WP_101602688.1\|515391_515913_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_101602689.1\|515929_520156_-	hypothetical protein	A0A2H4JHK7	uncultured_Caudovirales_phage	2.2e-14	41.0
WP_101602690.1\|520195_521953_-	type IV secretion protein Rhs	NA	NA	NA	NA
WP_101602691.1\|522047_522446_-	type VI secretion system needle protein Hcp	NA	NA	NA	NA
WP_101602693.1\|522919_524071_+	hypothetical protein	NA	NA	NA	NA
WP_101602694.1\|524112_524517_+	hypothetical protein	NA	NA	NA	NA
WP_101602695.1\|524640_524886_-	hypothetical protein	NA	NA	NA	NA
WP_101602696.1\|524895_525696_-	DUF5457 domain-containing protein	NA	NA	NA	NA
WP_101602697.1\|525699_527460_-	hypothetical protein	NA	NA	NA	NA
WP_101602698.1\|527480_528038_-	hypothetical protein	NA	NA	NA	NA
WP_101602699.1\|528034_528976_-	PKD domain-containing protein	NA	NA	NA	NA
WP_101602700.1\|528981_529428_-	type VI secretion system transmembrane protein TssO	NA	NA	NA	NA
WP_101602701.1\|529424_529925_-	hypothetical protein	NA	NA	NA	NA
WP_101604271.1\|529951_531097_-	hypothetical protein	NA	NA	NA	NA
WP_101602702.1\|531101_531986_-	hypothetical protein	NA	NA	NA	NA
WP_101602703.1\|532005_532947_-	hypothetical protein	NA	NA	NA	NA
WP_101602704.1\|532931_535373_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	7.3e-71	28.5

DBSCAN-SWA_2

571119 : 578121

unidentified_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101602737.1\|571119_571887_-	3'-5' exonuclease	H7BUJ3	unidentified_phage	6.3e-69	50.4
WP_101602738.1\|571890_574068_-	DNA polymerase III subunit alpha	H7BUJ5	unidentified_phage	2.0e-253	57.1
WP_101602739.1\|574064_574607_-	HNH endonuclease	E5DV63	Deep-sea_thermophilic_phage	1.7e-28	42.9
WP_101602740.1\|574599_575367_-	site-specific DNA-methyltransferase	A0A2I7QM56	Vibrio_phage	2.7e-64	49.6
WP_101602741.1\|575332_577084_-	PHP domain-containing protein	H7BUJ7	unidentified_phage	7.8e-115	49.0
WP_101602742.1\|577080_578121_-	hypothetical protein	H7BUJ8	unidentified_phage	6.4e-117	57.8

DBSCAN-SWA_3

2148966 : 2156313

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022011003.1\|2148966_2150703_-	thiamine pyrophosphate-binding protein	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	4.7e-72	31.4
WP_022011004.1\|2150689_2151610_-	NAD(P)-dependent oxidoreductase	A0A1V0SKV4	Klosneuvirus	5.7e-16	24.3
WP_101603201.1\|2151606_2152686_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	7.1e-18	25.4
WP_005781149.1\|2152689_2153466_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_101603202.1\|2153503_2154847_-	lipopolysaccharide biosynthesis protein RfbH	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	1.8e-47	32.8
WP_101603203.1\|2154839_2155412_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.8e-44	50.8
WP_101603204.1\|2155425_2156313_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.2e-105	63.9

Anti-CRISPR protein detection

Acr_ID: NZ_CP018937.1|WP_073342444.1|2791917_2792340_-|PcfK-like-protein

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Acr_ID: NZ_CP018937.1|WP_004310304.1|3007076_3007496_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP018937.1|WP_073342444.1|2791917_2792340_-|PcfK-like-protein

2791917_2792340_-

140 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5673758865248227	1	1.0

NZ_CP018937.1|WP_004310304.1|3007076_3007496_-|hypothetical-protein

3007076_3007496_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.574468085106383	0.9928057553956835	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018937

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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