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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024139 Escherichia coli strain 14EC020 plasmid p14EC020a, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024140 Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence 0 crisprs csa3 0 0 2 0
NZ_CP024138 Escherichia coli strain 14EC020 chromosome, complete genome 5 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT,WYL 0 13 8 0

Results visualization

1. NZ_CP024140
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 16321 : 60641 46 Escherichia_phage(37.5%) bacteriocin,integrase,transposase attL 39803:39862|attR 65905:66727
DBSCAN-SWA_2 65195 : 113911 52 Stx2-converting_phage(33.33%) protease,tRNA,transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP024138
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024138_1 1112469-1112926 Unclear I-E
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024138_2 1138628-1139327 TypeI-E I-E
11 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024138_3 2332188-2332311 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024138_4 2977710-2977801 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024138_5 4027916-4028048 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_CP024138_4 4.1|2977736|40|NZ_CP024138|CRISPRCasFinder 2977736-2977775 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP024138_5 5.1|4027933|42|NZ_CP024138|PILER-CR 4027933-4027974 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 1 0.976
NZ_CP024138_5 5.2|4027992|40|NZ_CP024138|PILER-CR 4027992-4028031 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 1 0.975
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032392 Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence 28190-28221 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP022965 Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal2, complete sequence 29440-29471 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NC_007208 Salmonella enterica OU7025 plasmid pOU1113, complete sequence 19749-19780 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_HG970001 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 plasmid pSG, complete sequence 38393-38424 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032386 Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence 3653-3684 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032388 Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_1, complete sequence 42554-42585 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP030208 Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence 4890-4921 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032450 Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence 68762-68793 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NC_011204 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence 31020-31051 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NC_019106 Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence 75580-75611 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NC_019112 Salmonella enterica subsp. enterica serovar Pullorum plasmid pSPUV, complete sequence 20322-20353 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP012348 Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 plasmid pCFSAN000725_01, complete sequence 42630-42661 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP019180 Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence 59477-59508 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032394 Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence 17037-17068 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NC_010422 Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence 19784-19815 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032381 Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence 47366-47397 2 0.938
NZ_CP024138_2 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139023-1139054 32 NZ_CP032447 Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence 58031-58062 2 0.938
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_CP024138_2 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139267-1139298 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_CP024138_3 3.1|2332231|38|NZ_CP024138|CRISPRCasFinder 2332231-2332268 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP022140 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence 27735-27766 6 0.812
NZ_CP024138_1 1.2|1112561|30|NZ_CP024138|PILER-CR 1112561-1112590 30 MN693193 Marine virus AFVG_25M440, complete genome 51418-51447 7 0.767
NZ_CP024138_1 1.2|1112561|30|NZ_CP024138|PILER-CR 1112561-1112590 30 MK250029 Prevotella phage Lak-C1, complete genome 375741-375770 8 0.733
NZ_CP024138_1 1.2|1112561|30|NZ_CP024138|PILER-CR 1112561-1112590 30 MK250016 Prevotella phage Lak-A1, complete genome 410514-410543 8 0.733
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_LT904880 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3 100861-100892 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_LT904895 Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2 32455-32486 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP012254 Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence 90639-90670 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029647 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence 24048-24079 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_LT904853 Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2 2158-2189 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NC_003385 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence 69550-69581 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029859 Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence 33422-33453 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029847 Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence 64890-64921 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029916 Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence 3001-3032 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029893 Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence 30210-30241 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029876 Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence 21803-21834 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029884 Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence 5429-5460 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029961 Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence 76887-76918 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029849 Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence 9632-9663 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029857 Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence 17697-17728 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029929 Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence 73527-73558 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029865 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence 87633-87664 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_LT883154 Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2 32810-32841 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029905 Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence 30728-30759 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029851 Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence 44207-44238 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP040567 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence 17468-17499 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029889 Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence 17968-17999 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029891 Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence 18575-18606 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029898 Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence 21136-21167 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029951 Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence 47286-47317 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029867 Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence 33258-33289 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029901 Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence 32901-32932 8 0.75
NZ_CP024138_1 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT 1112683-1112714 32 NZ_CP029921 Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence 100446-100477 8 0.75
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 70246-70277 8 0.75
NZ_CP024138_2 2.8|1139084|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1139084-1139115 32 NZ_CP042263 Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence 173595-173626 8 0.75
NZ_CP024138_1 1.2|1112561|30|NZ_CP024138|PILER-CR 1112561-1112590 30 HQ331142 Salmonella phage S16, complete genome 97369-97398 9 0.7
NZ_CP024138_1 1.8|1112744|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR 1112744-1112775 32 AP014399 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 35411-35442 9 0.719
NZ_CP024138_1 1.8|1112744|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR 1112744-1112775 32 AP013383 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13 29583-29614 9 0.719
NZ_CP024138_1 1.9|1112805|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR 1112805-1112836 32 NZ_CP021994 Cryobacterium sp. LW097 plasmid unnamed1 33387-33418 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP011404 Lactobacillus salivarius str. Ren plasmid pR1, complete sequence 100759-100790 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 48192-48223 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 248214-248245 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP017108 Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence 140326-140357 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP017110 Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence 20889-20920 9 0.719
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP029460 Clostridium novyi strain 150557 plasmid pCN2, complete sequence 45232-45263 9 0.719
NZ_CP024138_1 1.10|1112866|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR 1112866-1112897 32 NZ_CP024940 Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence 1163456-1163487 10 0.688
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NC_018511 Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence 60-91 10 0.688
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NC_001446 Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence 4548-4579 10 0.688
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP009345 Bacillus thuringiensis HD1002 plasmid 6, complete sequence 1165-1196 10 0.688
NZ_CP024138_2 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT 1138657-1138688 32 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 105460-105491 10 0.688
NZ_CP024138_5 5.2|4027992|40|NZ_CP024138|PILER-CR 4027992-4028031 40 NZ_CP034685 Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence 143235-143274 11 0.725

1. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 4.1|2977736|40|NZ_CP024138|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975 

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

26. spacer 5.1|4027933|42|NZ_CP024138|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976 

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

27. spacer 5.2|4027992|40|NZ_CP024138|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975 

catggcgtagaaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********************************.*******

28. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

29. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022965 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal2, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

30. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_007208 (Salmonella enterica OU7025 plasmid pOU1113, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

31. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG970001 (Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 plasmid pSG, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

32. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

33. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032388 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_1, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

34. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

35. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

36. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

37. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

38. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_019112 (Salmonella enterica subsp. enterica serovar Pullorum plasmid pSPUV, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

39. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012348 (Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 plasmid pCFSAN000725_01, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

40. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

41. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

42. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

43. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

44. spacer 2.7|1139023|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 2, identity: 0.938 

tgggatgagcaaataacgtcgtttcctagaaa	CRISPR spacer
tgggatgagcgaataacgtcttttcctagaaa	Protospacer
**********.********* ***********

45. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

46. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

47. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

48. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

49. spacer 2.11|1139267|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

50. spacer 3.1|2332231|38|NZ_CP024138|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

51. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022140 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812 

cattgaa-aacattgcctttattttattttttg	CRISPR spacer
-attaaatcacattccctctattttattttttc	Protospacer
 ***.**  ***** ***.*************

52. spacer 1.2|1112561|30|NZ_CP024138|PILER-CR matches to MN693193 (Marine virus AFVG_25M440, complete genome) position: , mismatch: 7, identity: 0.767 

gcaattaatttagttccagatgctgcgaaa	CRISPR spacer
agaattaatttagtaccagatggtggacaa	Protospacer
. ************ ******* ** . **

53. spacer 1.2|1112561|30|NZ_CP024138|PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.733 

gcaattaatttagttccagatgctgcgaaa	CRISPR spacer
gcaattaattcagttccagatacaaaacga	Protospacer
**********.**********.* . . .*

54. spacer 1.2|1112561|30|NZ_CP024138|PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.733 

gcaattaatttagttccagatgctgcgaaa	CRISPR spacer
gcaattaattcagttccagatacaaaacga	Protospacer
**********.**********.* . . .*

55. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

56. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

57. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttatca	Protospacer
******** *****.********  **  .*.

58. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

59. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

60. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

61. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

62. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

63. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

64. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

65. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

66. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

67. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

68. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

69. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

70. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

71. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

72. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

73. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

74. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

75. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

76. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

77. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

78. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

79. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

80. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

81. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

82. spacer 1.7|1112683|32|NZ_CP024138|CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75 

aatgattgatataaatctgtgtacggtgtccg	CRISPR spacer
aatgattgttataagtctgtgtagcgttgttg	Protospacer
******** *****.********  **  ..*

83. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 8, identity: 0.75 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgctaaaacattggctttatttaatttttta	Protospacer
.  . ********* ******** *******.

84. spacer 2.8|1139084|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042263 (Litoreibacter sp. LN3S51 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

ccgccgtgccagtgatcctcatacggcctgtt	CRISPR spacer
cggtgcagccagtgatcgtcatacagcctgtg	Protospacer
* *.   ********** ******.******

85. spacer 1.2|1112561|30|NZ_CP024138|PILER-CR matches to HQ331142 (Salmonella phage S16, complete genome) position: , mismatch: 9, identity: 0.7 

gcaattaatttagttccagatgctgcgaaa	CRISPR spacer
acttgccgtttagttccagatgctgctaat	Protospacer
.*   . .****************** **

86. spacer 1.8|1112744|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR matches to AP014399 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C110A-MedDCM-OCT-S26-C20, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.719 

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.

87. spacer 1.8|1112744|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR matches to AP013383 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C110A-MedDCM-OCT-S24-C13) position: , mismatch: 9, identity: 0.719 

ctaggataaattaaaagacaaaattgcagcaa	CRISPR spacer
gtcagataaattaaaagagataattgcaaatt	Protospacer
 * .************** * *******.

88. spacer 1.9|1112805|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021994 (Cryobacterium sp. LW097 plasmid unnamed1) position: , mismatch: 9, identity: 0.719 

gagcgaccagtatcaagatcgacaggttttgc	CRISPR spacer
gagcgaccagcagcaagatcgaccagacctca	Protospacer
**********.* ********** .* ..*

89. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011404 (Lactobacillus salivarius str. Ren plasmid pR1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

90. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

91. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

92. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

93. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017110 (Lactobacillus salivarius strain CICC23174 plasmid pLS_3, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tttaataaacattgccttaattttattattaa	Protospacer
. * . ************ ******** ** .

94. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029460 (Clostridium novyi strain 150557 plasmid pCN2, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
aaaaaagaacattgtatttattttatttttaa	Protospacer
 *  .*.*******. ************** .

95. spacer 1.10|1112866|32|NZ_CP024138|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 10, identity: 0.688 

atcgatatgtacgttagcgaggggatcacgca	CRISPR spacer
ggcgatatttacgttagcgacgggactgacct	Protospacer
. ****** *********** ****...  *

96. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_018511 (Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

97. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NC_001446 (Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

98. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009345 (Bacillus thuringiensis HD1002 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
tcgttcttacatttcttttattttattttttt	Protospacer
.  *    ***** *.***************

99. spacer 2.1|1138657|32|NZ_CP024138|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgaaaacattgcctttattttattttttg	CRISPR spacer
accttaaaacatttcctttgttttatttagat	Protospacer
  .* ******** *****.********

100. spacer 5.2|4027992|40|NZ_CP024138|PILER-CR matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 11, identity: 0.725 

catggcgtagaaaaaagaaattttcaatattgttttatgg-	CRISPR spacer
aacacaatagaaaaaagaaattttcaaccttg-tttatact	Protospacer
 *..  .********************. *** *****.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 55432 : 128813 56 Stx2-converting_phage(27.27%) transposase NA
DBSCAN-SWA_2 1155681 : 1162821 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_3 1526282 : 1571441 56 Enterobacteria_phage(90.7%) terminase,holin,tRNA,tail,capsid,plate,portal,integrase,head attL 1563355:1563368|attR 1568272:1568285
DBSCAN-SWA_4 1777487 : 1786932 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_5 1939637 : 2045957 84 Escherichia_phage(36.73%) terminase,holin,protease,capsid,tail,portal,integrase,head,transposase attL 1950340:1950355|attR 2010965:2010980
DBSCAN-SWA_6 2405890 : 2473206 77 Enterobacteria_phage(39.22%) terminase,lysis,protease,tail,portal,integrase attL 2413467:2413482|attR 2442773:2442788
DBSCAN-SWA_7 3244003 : 3299653 81 Enterobacteria_phage(52.24%) terminase,lysis,protease,tail,capsid,portal,integrase,head,transposase attL 3250670:3250686|attR 3307599:3307615
DBSCAN-SWA_8 4622348 : 4674633 65 Escherichia_phage(40.43%) terminase,lysis,holin,protease,tail,capsid,plate,portal,integrase,head attL 4638283:4638329|attR 4671845:4671891

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage