CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015572	Pasteurella multocida strain USDA-ARS-USMARC-60381 chromosome, complete genome	2 crisprs	cas3,cas14j,DEDDh,DinG,cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f	0	21	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015572_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015572_1

246827-248114

Unclear

I-F

Consensus_repeat	Method
GTTAACTGCCGTATAGGCAGCTTAGAAA	PILER-CR
GTTAACTGCCGTATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTAACTGCCGTATAGGCAGCTTAGAAA	CRT

21 spacers

cas3

The CRISPR arrays of NZ_CP015572_1

>merge|NZ_CP015572|1|246827-248114|PILER-CR,CRISPRCasFinder,CRT
GTTAACTGCCGTATAGGCAGCTTAGAAAAAGCTAATGATGTAATGGGTAATGTTGGGCAAGTTAACTGCCGTATAGGCAGCTTAGAAACTCAAGAACACGGTCACAATTACACACAAACCGTTAACTGCCGTATAGGCAGCTTAGAAATAACGCTAATTTGGCATCTCCGGCTTGTTCTGGTTAACTGCCGTATAGGCAGCTTAGAAAGCTGTATAAGCGGTTAAAAAAGTTATATTTTTGTTAACTGCCGTATAGGCAGCTTAGAAAATTATTTCTTTCAGGTGTTGGGGGGATTGAATGTTAACTGCCGTATAGGCAGCTTAGAAATTTTGAATGCTCATCACGCATTTGTTGCAACCGTTAACTGCCGTATAGGCAGCTTAGAAAGCTTGAAAGTGTTGGCTTGAAACTTTCGGGGCGTTAACTGCCGTATAGGCAGCTTAGAAATTGATCGTTTGCGCGAAATACCAATTTTTTTAGTTAACTGCCGTATAGGCAGCTTAGAAAAACAGCTCTTACACCAGCGCAAAAATTTGCGAGTTAACTGCCGTATAGGCAGCTTAGAAAAAAATCTCTGGAATTTGTCGCATATTGCCTTTGTTAACTGCCGTATAGGCAGCTTAGAAAGTTGCAAGGTTGTAAGCTGTCCCCGCGTATTCGTTAACTGCCGTATAGGCAGCTTAGAAAATGAACACATGATCACTTCTTGATGGATCAAAGTTAACTGCCGTATAGGCAGCTTAGAAAACTTCCGCGAATTTCGTTAAAAAACGACCGCAGTTAACTGCCGTATAGGCAGCTTAGAAAATTGCCTTTCGTTGGGCAAAAAAGAATGTTTAGTTAACTGCCGTATAGGCAGCTTAGAAAACCAATAGTCGTCGCGCTCAAAATCAGGTAAAGTTAACTGCCGTATAGGCAGCTTAGAAAAAGTGTCCGCGCTCACGTTAATCCCCGTAAGCGTTAACTGCCGTATAGGCAGCTTAGAAAAAAAGCATTCTGTTTACGCGTAAAAGGATCAAGTTAACTGCCGTGTAGGCAGCTTAGAAAAGCTTTAAGCTCTGCAAATGCCGAACTCATACGTTAACTGCCGTGTAGGCAGCTTAGAAAGATTATTTTAAGCAACGGAGCGGAATTACACTGTTAACTGCCGTATAGGTAGCTTAGAAAGTCATCTTCCAATTCTTCTGTTTTCTGCTCTTGTTAACTGCCGTGTAGGCAGCTTAGAAATAAAGCGATCTTGGCTCGATTATCAGATTGGTGTTAACTGCCGTATAGGCAGTTTCAATT

>NZ_CP015572|1|1|246827-248054|PILER-CR
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGCTAATGATGTAATGGGTAATGTTGGGCAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	CTCAAGAACACGGTCACAATTACACACAAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TAACGCTAATTTGGCATCTCCGGCTTGTTCTG
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTGTATAAGCGGTTAAAAAAGTTATATTTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTATTTCTTTCAGGTGTTGGGGGGATTGAAT
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTTTGAATGCTCATCACGCATTTGTTGCAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTTGAAAGTGTTGGCTTGAAACTTTCGGGGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTGATCGTTTGCGCGAAATACCAATTTTTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AACAGCTCTTACACCAGCGCAAAAATTTGCGA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAATCTCTGGAATTTGTCGCATATTGCCTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	GTTGCAAGGTTGTAAGCTGTCCCCGCGTATTC
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATGAACACATGATCACTTCTTGATGGATCAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACTTCCGCGAATTTCGTTAAAAAACGACCGCA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTGCCTTTCGTTGGGCAAAAAAGAATGTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACCAATAGTCGTCGCGCTCAAAATCAGGTAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGTGTCCGCGCTCACGTTAATCCCCGTAAGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAAGCATTCTGTTTACGCGTAAAAGGATCAA
GTTAACTGCCGTGTAGGCAGCTTAGAAA	AGCTTTAAGCTCTGCAAATGCCGAACTCATAC
GTTAACTGCCGTGTAGGCAGCTTAGAAA	GATTATTTTAAGCAACGGAGCGGAATTACACT
GTTAACTGCCGTATAGGTAGCTTAGAAA	GTCATCTTCCAATTCTTCTGTTTTCTGCTCTT
GTTAACTGCCGTGTAGGCAGCTTAGAAA

>NZ_CP015572|1|1|246827-248114|CRISPRCasFinder
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGCTAATGATGTAATGGGTAATGTTGGGCAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	CTCAAGAACACGGTCACAATTACACACAAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TAACGCTAATTTGGCATCTCCGGCTTGTTCTG
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTGTATAAGCGGTTAAAAAAGTTATATTTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTATTTCTTTCAGGTGTTGGGGGGATTGAAT
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTTTGAATGCTCATCACGCATTTGTTGCAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTTGAAAGTGTTGGCTTGAAACTTTCGGGGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTGATCGTTTGCGCGAAATACCAATTTTTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AACAGCTCTTACACCAGCGCAAAAATTTGCGA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAATCTCTGGAATTTGTCGCATATTGCCTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	GTTGCAAGGTTGTAAGCTGTCCCCGCGTATTC
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATGAACACATGATCACTTCTTGATGGATCAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACTTCCGCGAATTTCGTTAAAAAACGACCGCA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTGCCTTTCGTTGGGCAAAAAAGAATGTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACCAATAGTCGTCGCGCTCAAAATCAGGTAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGTGTCCGCGCTCACGTTAATCCCCGTAAGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAAGCATTCTGTTTACGCGTAAAAGGATCAA
GTTAACTGCCGTGTAGGCAGCTTAGAAA	AGCTTTAAGCTCTGCAAATGCCGAACTCATAC
GTTAACTGCCGTGTAGGCAGCTTAGAAA	GATTATTTTAAGCAACGGAGCGGAATTACACT
GTTAACTGCCGTATAGGTAGCTTAGAAA	GTCATCTTCCAATTCTTCTGTTTTCTGCTCTT
GTTAACTGCCGTGTAGGCAGCTTAGAAA	TAAAGCGATCTTGGCTCGATTATCAGATTGGT
GTTAACTGCCGTATAGGCAGTTTCAATT

>NZ_CP015572|1|1|246827-248114|CRT
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGCTAATGATGTAATGGGTAATGTTGGGCAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	CTCAAGAACACGGTCACAATTACACACAAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TAACGCTAATTTGGCATCTCCGGCTTGTTCTG
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTGTATAAGCGGTTAAAAAAGTTATATTTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTATTTCTTTCAGGTGTTGGGGGGATTGAAT
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTTTGAATGCTCATCACGCATTTGTTGCAACC
GTTAACTGCCGTATAGGCAGCTTAGAAA	GCTTGAAAGTGTTGGCTTGAAACTTTCGGGGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	TTGATCGTTTGCGCGAAATACCAATTTTTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AACAGCTCTTACACCAGCGCAAAAATTTGCGA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAATCTCTGGAATTTGTCGCATATTGCCTTT
GTTAACTGCCGTATAGGCAGCTTAGAAA	GTTGCAAGGTTGTAAGCTGTCCCCGCGTATTC
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATGAACACATGATCACTTCTTGATGGATCAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACTTCCGCGAATTTCGTTAAAAAACGACCGCA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ATTGCCTTTCGTTGGGCAAAAAAGAATGTTTA
GTTAACTGCCGTATAGGCAGCTTAGAAA	ACCAATAGTCGTCGCGCTCAAAATCAGGTAAA
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAGTGTCCGCGCTCACGTTAATCCCCGTAAGC
GTTAACTGCCGTATAGGCAGCTTAGAAA	AAAAGCATTCTGTTTACGCGTAAAAGGATCAA
GTTAACTGCCGTGTAGGCAGCTTAGAAA	AGCTTTAAGCTCTGCAAATGCCGAACTCATAC
GTTAACTGCCGTGTAGGCAGCTTAGAAA	GATTATTTTAAGCAACGGAGCGGAATTACACT
GTTAACTGCCGTATAGGTAGCTTAGAAA	GTCATCTTCCAATTCTTCTGTTTTCTGCTCTT
GTTAACTGCCGTGTAGGCAGCTTAGAAA	TAAAGCGATCTTGGCTCGATTATCAGATTGGT
GTTAACTGCCGTATAGGCAGTTTCAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015572.1\|WP_005719208.1\|238787_239216_-\|DUF2489-domain-containing-protein	unknown	unknown	gnl\|CDD\|378470
NZ_CP015572.1\|WP_016504356.1\|253463_254906_-\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_CP015572.1\|WP_005724867.1\|243773_244478_+\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|225742
NZ_CP015572.1\|WP_016504355.1\|254943_255870_-\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NZ_CP015572.1\|WP_014326414.1\|248165_249131_-\|lipopolysaccharide-heptosyltransferase-RfaC	unknown	unknown	gnl\|CDD\|236809
NZ_CP015572.1\|WP_014326412.1\|250242_250650_-\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|225403
NZ_CP015572.1\|WP_014326415.1\|244525_245239_-\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP015572.1\|WP_014326410.1\|252418_253438_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131470
NZ_CP015572.1\|WP_014326416.1\|240594_243498_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP015572.1\|WP_014326407.1\|256055_256667_+\|high-frequency-lysogenization-protein-HflD	unknown	unknown	gnl\|CDD\|225467
NZ_CP015572.1\|WP_005758057.1\|245350_246679_+\|ATP-dependent-RNA-helicase-SrmB	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236877
NZ_CP015572.1\|WP_014326413.1\|249127_250174_-\|lipopolysaccharide-heptosyltransferase-II	unknown	unknown	gnl\|CDD\|182835
NZ_CP015572.1\|WP_005758065.1\|258421_260008_+\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP015572.1\|WP_014326419.1\|236687_237356_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP015572.1\|WP_014326417.1\|239221_239791_-\|Der-GTPase-activating-protein-YihI	unknown	unknown	gnl\|CDD\|367878
NZ_CP015572.1\|WP_005752888.1\|236256_236592_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP015572.1\|WP_005724855.1\|239854_240514_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP015572.1\|WP_016504414.1\|237396_238764_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP015572.1\|WP_005724904.1\|256694_258062_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP015572.1\|WP_014326411.1\|250765_252190_-\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051

Protein	Function_ID	Function_description	E-value
NZ_CP015572.1\|WP_005719208.1\|238787_239216_-\|DUF2489-domain-containing-protein	gnl\|CDD\|378470	pfam10675, DUF2489, Protein of unknown function (DUF2489). This is a bacterial family of uncharacterized proteins.	1.12596e-47
NZ_CP015572.1\|WP_016504356.1\|253463_254906_-\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	2.82868e-175
NZ_CP015572.1\|WP_005724867.1\|243773_244478_+\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|225742	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism].	5.27246e-73
NZ_CP015572.1\|WP_016504355.1\|254943_255870_-\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	0
NZ_CP015572.1\|WP_014326414.1\|248165_249131_-\|lipopolysaccharide-heptosyltransferase-RfaC	gnl\|CDD\|236809	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC.	0
NZ_CP015572.1\|WP_014326412.1\|250242_250650_-\|copper-chaperone-PCu(A)C	gnl\|CDD\|225403	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and metabolism].	1.12449e-42
NZ_CP015572.1\|WP_014326415.1\|244525_245239_-\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.77606e-93
NZ_CP015572.1\|WP_014326410.1\|252418_253438_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|131470	TIGR02417, Fructose_repressor_Catabolite_repressor/activator., D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer. [Regulatory functions, DNA interactions].	0
NZ_CP015572.1\|WP_014326416.1\|240594_243498_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP015572.1\|WP_014326407.1\|256055_256667_+\|high-frequency-lysogenization-protein-HflD	gnl\|CDD\|225467	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only].	9.09394e-109
NZ_CP015572.1\|WP_005758057.1\|245350_246679_+\|ATP-dependent-RNA-helicase-SrmB	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0
NZ_CP015572.1\|WP_014326413.1\|249127_250174_-\|lipopolysaccharide-heptosyltransferase-II	gnl\|CDD\|182835	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF.	0
NZ_CP015572.1\|WP_005758065.1\|258421_260008_+\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	6.14413e-167
NZ_CP015572.1\|WP_014326419.1\|236687_237356_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	3.45531e-76
NZ_CP015572.1\|WP_014326417.1\|239221_239791_-\|Der-GTPase-activating-protein-YihI	gnl\|CDD\|367878	pfam04220, YihI, Der GTPase activator (YihI). YihI activates the GTPase activity of Der, a 50S ribosomal subunit stability factor. The stimulation is specific to Der as YihI does not stimulate the GTPase activity of Era or ObgE. The interaction of YihI with Der requires only the C-terminal 78 amino acids of YihI. A yihI deletion mutant is viable and shows a shorter lag period, but the same post-lag growth rate as a wild-type strain. yihI is expressed during the lag period. Overexpression of yihI inhibits cell growth and biogenesis of the 50S ribosomal subunit. YihI is an unusual, highly hydrophilic protein with an uneven distribution of charged residues, resulting in an N-terminal region with high pI and a C-terminal region with low pI.	8.55528e-59
NZ_CP015572.1\|WP_005752888.1\|236256_236592_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.65249e-05
NZ_CP015572.1\|WP_005724855.1\|239854_240514_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	6.19774e-102
NZ_CP015572.1\|WP_016504414.1\|237396_238764_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP015572.1\|WP_005724904.1\|256694_258062_+\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP015572.1\|WP_014326411.1\|250765_252190_-\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0

>NZ_CP015572.1|WP_005758057.1|245350_246679_+|ATP-dependent-RNA-helicase-SrmB
MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTDPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLARFIDEEQVSRGIVFVRRREDVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTPPANAE
>NZ_CP015572.1|WP_014326415.1|244525_245239_-|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MSAKQNGFTFKQFHIEHHRCAMKVGTDGILLGAWADVSQAERILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANIHASPWAQRVHVYQQDAAEFCRNAVNKFDLIVANPPYFPQGVDCATPQRDLARYTATHRHVDWLNWASHCLSEQGKISMVLPFEAGETLLKQTALYCIARCEVITKKGKAPQRLLLTFSLQAQPLQPSQLIIYDESNRYHPDFIGLTKDFYLAF
>NZ_CP015572.1|WP_005724867.1|243773_244478_+|nicotinamide-riboside-transporter-PnuC
MNLQAVKNEFLGGWKPFEVAWLSLFLIAQIVIYIQNPDSILGMISGISGILCVVFVSKGKVSNYFFGLIFAYTYFYVAWQANYLGEMNTVLYVYIPAQFIGYFLWRENLQKGSEGAESVIAKSLTLKGWAIVLGTITIGTLLFVQALNAAGGSSTGLDGLTTVIVVVAQLLMILRYREQWLLWIALNVISIVLWTQAKEGSLAMVTMYSAYLLNSLYGYYNWTKLEKAHRQSVQ
>NZ_CP015572.1|WP_014326416.1|240594_243498_-|RNA-polymerase-associated-protein-RapA
MTFAVGQRWMSESENNLGLGLIVAIDMRTVTILFPASEEQRIYALNSAPLTRVLFQIGDEIVHHEGWKGNVLDILENNGVAFYLLKRQDNGEEITIQERDIAHQMTFSKPQDRLFTTQIDRNEHFTLRYQALTHQQAQFQSPLRGLRGIRAGLIPHQLHIAREVGQRTAPRVLLADEVGLGKTIEAGMILQQQLFAEKVERVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCADFEDPASALWINPFSTESQIICALDWLCEKPKRVEQLLEAGFDMLIVDEAHHLGWSEHNPSLEYQLVEQLARQIPAVLLLTATPEQLGQESHFARLSLLDPDRFYDYQAFVQEQQQYQPVADAVQSLLADKPLSTVEKNHIADLLSEQDVEPMLKVIDSQAHDEQKALARQELIDNLIDRHGTSRVLFRNTRQGVKSFPHRTYNQITLELPKQYNNAANVLAMLGEKSENDSFYPEQMFQKLNPDARWWEFDPRLAWLITFLKNHREEKVLVICRHANTAIQLEQALREKEAIRAAVFHEKLSIVERDRAAAYFAQQEDGAQVLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIGQSRDIQIHVPCFADTAQVVLARWYHEGLNAFEETCPMGMTLFETHQTQLNKFLQKPTALEGFAEFVSLTRKQQHELKQALEKGRDRLLELNSNGGEQAQQLATDIAEQDSTTELVNFTLNLFDIIGVDQEDLGEKSIVITPASNMLVPDFPGLKEEGATVTFDRQLSLAREDVEFMSWDHPLIRHGIDLITSGDIGKSAVSLLINKALPAGTLLLEMIYVVEAQAPKGLQLTRFLPPTPIRLLLDQKGNNLAEQVSFNALQKQLKPIGKNMANKVVKMVRPNIEQLVKLSEQKIVAQAQQIIHNTQQLADQTLSAELNRLTALQAVNKNIRQDEVDALENIRSQSLAQLQQATWRLDSLRVIVSNKE
>NZ_CP015572.1|WP_005724855.1|239854_240514_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MALISYTPPTDPYLDIVHYDDHFVVINKPSGLLSVPGNQPQYYDSAMSRVKEKYGFCEPAHRLDMSTSGLILFALSKAADRELKRQFREREPKKHYQALVWGHLEEDQGEVNLPLICDWENRPRQKICFERGKPALTLYEVLARYPNNTTRVKLTPITGRSHQLRLHMLALGHPILGDKFYAPPQAKALSPRLCLHAEQLAFRHPITQEWLSFSAPPAF
>NZ_CP015572.1|WP_014326417.1|239221_239791_-|Der-GTPase-activating-protein-YihI
MARKKKTRRVSDIMPARKVDKKVELPKGKPGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNKHQALEKKDPRIGSRKKVPLVVEFVNKPEKGMTIPPMKLEEKLPKQDPMLELELLESNECLNQLLDDLEAGKTLSAEDQQFVDDCLDRIAELMDELGISEDDDPEEDLLRTFEKIDINQFR
>NZ_CP015572.1|WP_005719208.1|238787_239216_-|DUF2489-domain-containing-protein
MWTNILLILAVLVIVAMASYAGYLLLALQKQKKAIANMRTARSQRLTESIVIIAKAMQNGDCNHSEGVIRLKMLLDPLGKKLKNYQAMYQLYEVVMEMPTHEKRRELKKNERMRLDLQRESAEAELEQKIRLELQQLLIDMK
>NZ_CP015572.1|WP_016504414.1|237396_238764_-|oxygen-independent-coproporphyrinogen-III-oxidase
MSDIVWDLALIQKYNQSGPRYTSYPTALEFNENYTNQDFIQATKRYPNRPLSLYVHIPFCHKLCYFCACNKTITRHQHKADIYLDFLEREIENRASLFKNRIATQVHWGGGTPTYLTEQQSARLMAMLRKHFTIAPDAEISIEMDPREIELNMLDHLRRIGFNRMSMGVQDFNKDVQKAINRVQDEDFIEALLKRARELGFQSTNLDLIYGLPLQNVDSFMFTLQKVIALNPDRLSVFNYAHLPSRFAGQAKIKNEQLPAPETKLTILQKMIETLGDAGYKFIGMDHFAKPDDELAIAQKQGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQNQKELKHYYTAIDNTGIALHKGFAMSEEDCLRRDVIKQLICNFKLDYQPIEQQYGIQFTSHFAEDLKLLAPLSEDGLLTIGEKDIQVSAKGRLLIRNICLCFDTYSREQAKRQQFSRII
>NZ_CP015572.1|WP_014326419.1|236687_237356_-|NAD(P)H-dependent-oxidoreductase
MSISKTDILNAFHFRHACKAYDPSKKISEEDFRFILETGRLSPSSFGFEPWKFLVIENPDIKALIRDTAWGAKDKVMDCSHFVVVLVRQPETLLADGEYVQHMMRDIHHIPEEMRKIRQNFYRTFSEQDFALTENPKAFYDWACRQSYIALANMLTSAAMIGIDSTPIEGFPLEKMDHIFVEQGLYDPKTYKLSVMIAFGYRLNEPKAKTRQAFDDVVEWVR
>NZ_CP015572.1|WP_005752888.1|236256_236592_+|helix-turn-helix-transcriptional-regulator
MQITRRNASTKGASVAEIDRKKVRNEIIQAMLMGELSQGEALRKLRIEMFGINQQHYIQLVKVSRQTLSNIENDKGNYSVETINKVFKPFGLELGLVPVSKALLKELFSTA
>NZ_CP015572.1|WP_014326414.1|248165_249131_-|lipopolysaccharide-heptosyltransferase-RfaC
MKICLIKTSSMGDILHSLPALTDAQRALPNLQVDWVVEESFAEIPHWHSAVRQVIPIALRRWRKTPFTALTRKQWKTYRTLLQSEQYDAVIDAQGLLKSALFATRLARGTRHGYDRHSIREPIAACFYDKKYAISYQQHAVERIRQLFAQSLNYPLPHTQGDYGIARHFPQHAQTMPYVLFFHGTTRQDKFLPDKQWRTLAEKLTAQGIQIHVPWSNPQEKQRAERIAQGLDLVTILPKSTLSELAQQIVNASAVVSVDTGLAHLSAALDKTNLTLYGATDPKLIGSYGKNQHYLVAESMDKIEADEIFQKLTALLSLNTI
>NZ_CP015572.1|WP_014326413.1|249127_250174_-|lipopolysaccharide-heptosyltransferase-II
MHILIIGPSWVGDMMMSHSLYQTLKQQYPQCEIDVMAPNWCKPLLERMPEVRQAITMPLGHGAFALGDRYRLGKALRHQYDMAIVLPNSLKSAFIPFFAKIPLRRGWKGESRYLFLNDLRSNKKDYPMMVQRYIALAFEKGAVPKAEDLPRPVPYLTVDPITQQHTLKKFEKQTALISPRPSIGFCPGAEFGPAKRWPHYHYAKLAEMLIQQGYAIRLFGSAKDEAVGEEIRQALPETMRHFCINLAGQTSLNEAVDLIADCTAIVTNDSGLMHIAAAVQRPLVALYGPTSPTYTPPLSEKAVIIRLIEDGLIKVRKGKDSDEGYHQSLIDIQPELVFDKLTGLLANT
>NZ_CP015572.1|WP_014326412.1|250242_250650_-|copper-chaperone-PCu(A)C
MKSLTQLLFILTALLPTSLFAHIHVEQAQMFSAKAGEPSAIFMNIHNTGNEDVSLALVQSDIRADIVLHGTQHGKMIEVTGINLPAHQMTALKRGGLHIMVFNVEQDLNAGDSFPLRLLFDNGEIMHIEAKIIQY
>NZ_CP015572.1|WP_014326411.1|250765_252190_-|PTS-sucrose-transporter-subunit-IIBC
MNFSQIAQQVIDKLGGKDNISAAAHCATRLRIVVKNENLIDKKGIENIEGVKGQFAVAGQYQIIFGSGTVNKVYAELSKLLGIGDMTTSEVAAAGTEKQGLLQRLVKGLADIFVPIIPAIVAGGLLMGIHSMLTAKGFFVEEKNVVDLYPAIADLVDFINTIANAPFVFLPVLLGFSATRKFGGNPFLGAALGMLLVHPALSDGWNYALTLTKGNIQYWHIFGLEIERVGYQGTVIPVLVASWVLATLEKNLRKVVPSFLDNLITPLFALFITGLLAFTVIGPIGREAGSLISTGLTWLYDTLGFVGGAIFGTLYAPIVITGMHQTFIAVETQLLAEVARTGGTFIFPIAAMSNIAQGAACLGAAYVMKDAKVRGIGVPSGISALLGITEPAMFGVNLRYRYPFISAMIGAGISSAVIALFNVKAIALGAAGLPGIPSIKPDSLAMYCVGMLISASIAFTLTVILGKRAQLKAE
>NZ_CP015572.1|WP_014326410.1|252418_253438_-|substrate-binding-domain-containing-protein
MSITNKKRITLSDIAKCCGLSTTTVSMILNNRGEEFKIKAETCQRVKAIAEQQGYRANVYAKSLKMQRSNVIGFVIPDLTNYGFACTAKILEKQCRENGLQLIITCSDDNPQQEKLAIERLLDRQIDFLITAPTHQDPSYYQKIGQHTPILQLDRYVPDLALNYVISNDSEHITALICRLCDQYQLTEFMYFGGQRTLSPSESRLAGFLQGLKQANLNLKKEWILHRTYQPESGYQMLAETEAKLGRLPQAIFTASYTLLEGVLRYLTEQKKMDLLLNRQLHLATFDDHDILNALPFHIHSIKQNHPQLAQQIFQHIMRYFAGKKSPNQKIDCDVIYRD
>NZ_CP015572.1|WP_016504356.1|253463_254906_-|glycoside-hydrolase-family-32-protein
MYIFNQGKYKSLHAQEVGELAQIRQHVLRDTQFRPTYHLAPETGLLNDPNGLVFDGEKYHIFYQWFPYAAIHGMKHWKHFITYDFHHFQAADPLIPDELFESHGCYSGGALLWQDQIVAFYTGNTRNAENQRIPHQNIAIFKKDGTLLKKRCLLNQAPTGYTEHVRDPKPFITEEGKIRFILGAQREDLSGTALIYEMTDLDATPQLIGEFKLPDFDNQQVFMWECPDLLKLQEQDLFLWSPQGKAQKTYCFQNHYHATYALGQYANLHFSAQHIEELDYGFDFYAPQSIQGSEGIYYAWVGLPDLTYPTDEYQWHSMLSLPRQFSIQQGILYQRPIPQVYAQCLPAHKYWVEGKQQIPHLDRSYVAFDAENQPFTLRFFTNQRGQQLILRYQNGILTLDRTYTTQTALMQQFGEQRHCILPQLNHVEIFFDRSVVEIFLNQGEKVMTSRFFIADRENALDSSRPLCVSVAELKPIILTP
>NZ_CP015572.1|WP_016504355.1|254943_255870_-|aminoimidazole-riboside-kinase
MGKIWVLGDAVVDLIPEGENTYLRCAGGAPANVAVGIARLGATTGFIGRVGDDPLGRFMLNKLQQENVCTQYMHLDPKQLTSTVIVDLKEGERSFTFMVNPSADQFLELSDLPHFNPNDWLHCCSIALINEPSRSSTFAAIHRIKAEGGFFSFDPNLRESLWNSPAEMKTVVNQVVALADVLKFSEEELLFLTDSDTLSDATAKLTQHYPDKLIIVTLGKLGATYYLQGKSQLISSKKALIPVDTTGAGDAFVSGLLFGISQVKNWQNPTALVEIIKQANACGALATTAKGAMSALPNKQQLDAFLAE
>NZ_CP015572.1|WP_014326407.1|256055_256667_+|high-frequency-lysogenization-protein-HflD
MANYYDITLALAGVCQAAKLVQQFAHEGQADQAAFETSLNTLLQIYPEDTLAVFGGKAQNLKLGLETLLEQMHGTGSDLSRYWISLLALESKLNKDPHAKAELARRIQYLPTQLEHDDLLDEQMLSTLASIYVDVISPLGKKIQVTGSTLYLQQLAMHHRIRACLLAGIRSAVLWRQVGGTKWQVLFSRRKIIAMAKQIYSSL
>NZ_CP015572.1|WP_005724904.1|256694_258062_+|adenylosuccinate-lyase
MQLNALTALSPIDGRYQDKVSSLRSIFSEFGLLKFRVTVEVRWLQKLAATDQIQEVSLLSQEANDYLNHIVENFSVQDAERIKEIERTTNHDVKAVEYFLKEKSEALPELAKISEFIHFACTSEDINNLSHALMLKTAREEVILPEWQNLIADISALANEYKTIPLLSRTHGQPASPSTIGKEMANVVYRLQRQFKQLQQIDILGKINGAVGNYNAHLSAYPDIDWHQFSEEFVTSLGLTWNPYTTQIEPHDYIAEFFDNVARFNTIIIDFDRDLWGYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGAKLPVSRWQRDLTDSTVLRNLGVGLGYCLIAYAATRKGISKLEVNEQHLRDELDQNWEVLAEPIQTVMRRYGIEKPYEKLKALTRGKRVDAEAMREFIETLDIPAQEKIRLQQMTPATYIGAAVELVEKL
>NZ_CP015572.1|WP_005758065.1|258421_260008_+|L-lactate-permease
MVFFLSILPIVLLIYLMVKRNSLPSYIALPLIAVLTYLLQAFYFGTDLTRLNANVIAGLIATQTPITIIFGAILFNRMMEVSGSTDVLRKWLANINPNPVAQIMIIGWAFAFMIEGASGFGTPAAIAAPILMGLGFKPLQVAMLALVMNSVPVSFGAVGTPTWFGFGPLGLSEDVVLEVGQKTAFIHFIAAFVIPVLALRFLVSWQQIKQNLVFIYISILACTIPYFLLAQVNYEFPALVGGAIGLFISILVANKGIGVSKTAQAEIQLEKVEFGVLVKALFPTMMLIAILIVTRIHQLGIKQLLNDATTWFSVSLGAFGEFKVSQALILSLNNILGQGINESYKTLYVPSLIPFIVTVIISIFVFKLNGTKAKTIAVSTYQQTKKPFFALLGALVMVKLMLVGNENYDSMVITIGKTFADVTGDKWVYFSSYLGAIGAFFSGSNTVSNLTFGGIQLSIAETTGMSVPLILALQSVGGAMGNMVCLNNIIAVCTVLNVSNQEGSILKRTVVPMFLYGVIAALVAVVIY

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Crispr_ID: NZ_CP015572_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015572_2

1522923-1523971

TypeI-F

Consensus_repeat	Method
TTTCTAAGCCATCTACACGATGGTGAAC	PILER-CR
TTTCTAAGCCATCTACACGATGGTGAAC	CRISPRCasFinder
TTTCTAAGCCATCTACACGATGGTGAAC	CRT

17 spacers

cas1,cas3-cas2,cas6f,cas7f,cas5f,cas8f

The CRISPR arrays of NZ_CP015572_2

>merge|NZ_CP015572|2|1522923-1523971|PILER-CR,CRISPRCasFinder,CRT
TTTTTAAGCCATCTACACGATGGTGAACTCGCAATATCCGTTAGTTTCTTAGCTTTAACTTTTCTAAGCCATCTACACGATGGTGAACATTTCAAGCTTAGATGTGAAATTCGCACCAACTTTCTAAGCCATCTACACAATGGTGAACATTTCAAGCTTAGATGTGAAATTCGCACCAACTTTCTAAGCCATCTACACGATGGTGAACATTTCAAGCTTAGATGTGAAATTCGCACCAACTTTCTAAGCCATCTACACGATGGTGAACATTTCAAGCTTAGATGTGAAATTCGCACCAACTTTCTAAGCCATCTACACGATGGTGAACGTAGTGAATCTTGCGGATAAACGTAGCTTAAATTTCTAAGCCATCTACACGATGGTGAACTTAATTCATCTGTTCAAGCGCAAGGTGGGCTTTTTCTAAGCCATCTACACGATGGTGAACTTCCAGCGTCGCGCGGTGTTAAATGAGACTTTTTTCTAAGCCATCTACACGATGGTGAACAGCTCCACTTTGATTGCCTCTAACATCGGGTATTTCTAAGCCATCTACACGATGGTGAACTCAAATCTCACGCACTTTCAGCACATGTTGTGTTTCTAAGCCATCTACACGATGGTGAACGATTGTCAGCCGTTAGTTGAACACGTCATTATTTTCTAAGCCATCTACACGATGGTGAACAGGGCATGGATTTTCGGCACTGGAAATCGAATTTTCTAAGCCATCTACACGATGGTGAACTTTTCAATGACCGTTAAATCTTCTAGTGTTTCTTTCTAAGCCATCTACACGATGGTGAACAAATGCAAACGCCCATGGTGCCGTTTCAACGACTTTCTAAGCCATCTACACGATGGTGAACTTCTTTTCTTATATTCGTCTTTTGTCACGAATTTTCTAAGCCATCTACACGATGGTGAACTTCTTTTCTTATATTCGTCTTTTGTCACGAATTTTCTAAGCCATCTACACGATGGTGAACTTGCGGCTAAACGTTCACAAGTTTTTTGTTGTTTTCTAAGCCATCTACACGATGGTGAAC

>NZ_CP015572|2|2|1522923-1523971|PILER-CR
TTTTTAAGCCATCTACACGATGGTGAAC	TCGCAATATCCGTTAGTTTCTTAGCTTTAACT
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACAATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	GTAGTGAATCTTGCGGATAAACGTAGCTTAAA
TTTCTAAGCCATCTACACGATGGTGAAC	TTAATTCATCTGTTCAAGCGCAAGGTGGGCTT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCCAGCGTCGCGCGGTGTTAAATGAGACTTT
TTTCTAAGCCATCTACACGATGGTGAAC	AGCTCCACTTTGATTGCCTCTAACATCGGGTA
TTTCTAAGCCATCTACACGATGGTGAAC	TCAAATCTCACGCACTTTCAGCACATGTTGTG
TTTCTAAGCCATCTACACGATGGTGAAC	GATTGTCAGCCGTTAGTTGAACACGTCATTAT
TTTCTAAGCCATCTACACGATGGTGAAC	AGGGCATGGATTTTCGGCACTGGAAATCGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTTTCAATGACCGTTAAATCTTCTAGTGTTTC
TTTCTAAGCCATCTACACGATGGTGAAC	AAATGCAAACGCCCATGGTGCCGTTTCAACGAC
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTGCGGCTAAACGTTCACAAGTTTTTTGTTGT
TTTCTAAGCCATCTACACGATGGTGAAC

>NZ_CP015572|2|2|1522923-1523971|CRISPRCasFinder
TTTTTAAGCCATCTACACGATGGTGAAC	TCGCAATATCCGTTAGTTTCTTAGCTTTAACT
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACAATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	GTAGTGAATCTTGCGGATAAACGTAGCTTAAA
TTTCTAAGCCATCTACACGATGGTGAAC	TTAATTCATCTGTTCAAGCGCAAGGTGGGCTT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCCAGCGTCGCGCGGTGTTAAATGAGACTTT
TTTCTAAGCCATCTACACGATGGTGAAC	AGCTCCACTTTGATTGCCTCTAACATCGGGTA
TTTCTAAGCCATCTACACGATGGTGAAC	TCAAATCTCACGCACTTTCAGCACATGTTGTG
TTTCTAAGCCATCTACACGATGGTGAAC	GATTGTCAGCCGTTAGTTGAACACGTCATTAT
TTTCTAAGCCATCTACACGATGGTGAAC	AGGGCATGGATTTTCGGCACTGGAAATCGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTTTCAATGACCGTTAAATCTTCTAGTGTTTC
TTTCTAAGCCATCTACACGATGGTGAAC	AAATGCAAACGCCCATGGTGCCGTTTCAACGAC
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTGCGGCTAAACGTTCACAAGTTTTTTGTTGT
TTTCTAAGCCATCTACACGATGGTGAAC

>NZ_CP015572|2|2|1522923-1523971|CRT
TTTTTAAGCCATCTACACGATGGTGAAC	TCGCAATATCCGTTAGTTTCTTAGCTTTAACT
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACAATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	ATTTCAAGCTTAGATGTGAAATTCGCACCAAC
TTTCTAAGCCATCTACACGATGGTGAAC	GTAGTGAATCTTGCGGATAAACGTAGCTTAAA
TTTCTAAGCCATCTACACGATGGTGAAC	TTAATTCATCTGTTCAAGCGCAAGGTGGGCTT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCCAGCGTCGCGCGGTGTTAAATGAGACTTT
TTTCTAAGCCATCTACACGATGGTGAAC	AGCTCCACTTTGATTGCCTCTAACATCGGGTA
TTTCTAAGCCATCTACACGATGGTGAAC	TCAAATCTCACGCACTTTCAGCACATGTTGTG
TTTCTAAGCCATCTACACGATGGTGAAC	GATTGTCAGCCGTTAGTTGAACACGTCATTAT
TTTCTAAGCCATCTACACGATGGTGAAC	AGGGCATGGATTTTCGGCACTGGAAATCGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTTTCAATGACCGTTAAATCTTCTAGTGTTTC
TTTCTAAGCCATCTACACGATGGTGAAC	AAATGCAAACGCCCATGGTGCCGTTTCAACGAC
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTCTTTTCTTATATTCGTCTTTTGTCACGAAT
TTTCTAAGCCATCTACACGATGGTGAAC	TTGCGGCTAAACGTTCACAAGTTTTTTGTTGT
TTTCTAAGCCATCTACACGATGGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015572.1\|WP_016504385.1\|1526677_1528012_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|274203
NZ_CP015572.1\|WP_014325843.1\|1528242_1530402_-\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	unknown	unknown	gnl\|CDD\|236981
NZ_CP015572.1\|WP_014325850.1\|1514029_1514746_-\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|223639
NZ_CP015572.1\|WP_014325842.1\|1530535_1532584_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234655
NZ_CP015572.1\|WP_005721273.1\|1534016_1534286_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP015572.1\|WP_005753664.1\|1516557_1518414_-\|response-regulator	unknown	unknown	gnl\|CDD\|236842
NZ_CP015572.1\|WP_005721328.1\|1512224_1513439_-\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP015572.1\|WP_005751227.1\|1537397_1537913_-\|heme-utilization-protein-HutZ	unknown	unknown	gnl\|CDD\|200361
NZ_CP015572.1\|WP_005753659.1\|1521772_1522753_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP015572.1\|WP_014325841.1\|1532765_1533878_+\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|183270
NZ_CP015572.1\|WP_016504384.1\|1525684_1526668_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|274204
NZ_CP015572.1\|WP_005721326.1\|1513486_1513951_-\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
NZ_CP015572.1\|WP_005721377.1\|1511606_1511993_-\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP015572.1\|WP_014325846.1\|1524674_1525682_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP015572.1\|WP_014325849.1\|1514959_1515763_+\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP015572.1\|WP_014325840.1\|1534452_1537356_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273808
NZ_CP015572.1\|WP_014325848.1\|1518471_1521792_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|187804
NZ_CP015572.1\|WP_005721379.1\|1511213_1511537_-\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
NZ_CP015572.1\|WP_014325847.1\|1524111_1524672_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|274202
NZ_CP015572.1\|WP_005725867.1\|1515826_1516417_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015572.1\|WP_016504385.1\|1526677_1528012_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|274203	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	5.29485e-151
NZ_CP015572.1\|WP_014325843.1\|1528242_1530402_-\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	0
NZ_CP015572.1\|WP_014325850.1\|1514029_1514746_-\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|223639	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis].	3.89077e-117
NZ_CP015572.1\|WP_014325842.1\|1530535_1532584_-\|methionine--tRNA-ligase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP015572.1\|WP_005721273.1\|1534016_1534286_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	3.85836e-50
NZ_CP015572.1\|WP_005753664.1\|1516557_1518414_-\|response-regulator	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0
NZ_CP015572.1\|WP_005721328.1\|1512224_1513439_-\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP015572.1\|WP_005751227.1\|1537397_1537913_-\|heme-utilization-protein-HutZ	gnl\|CDD\|200361	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ. Members of this family are heme utilization proteins, typically designated HutZ. They are members of the PPOX family (pfam01243) and, except for the lack of an N-terminal extension, are closely related to one form of heme oxidase (1.14.99.3), HugZ (TIGR04109). Members typically are found in a three-gene operon with radical SAM enzyme HutW and a protein of unknown function, HutX.	2.01653e-97
NZ_CP015572.1\|WP_005753659.1\|1521772_1522753_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NZ_CP015572.1\|WP_014325841.1\|1532765_1533878_+\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|183270	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC.	0
NZ_CP015572.1\|WP_016504384.1\|1525684_1526668_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|274204	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	5.3086e-151
NZ_CP015572.1\|WP_005721326.1\|1513486_1513951_-\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	5.78928e-83
NZ_CP015572.1\|WP_005721377.1\|1511606_1511993_-\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	1.51567e-94
NZ_CP015572.1\|WP_014325846.1\|1524674_1525682_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP015572.1\|WP_014325849.1\|1514959_1515763_+\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	9.50997e-153
NZ_CP015572.1\|WP_014325840.1\|1534452_1537356_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.24483e-109
NZ_CP015572.1\|WP_014325848.1\|1518471_1521792_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_CP015572.1\|WP_005721379.1\|1511213_1511537_-\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	6.36459e-65
NZ_CP015572.1\|WP_014325847.1\|1524111_1524672_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|274202	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.09974e-90

>NZ_CP015572.1|WP_005753659.1|1521772_1522753_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MRKTPYIPSSDLKTIMHSKRANIYYLEHCRVLLNGGRVEYVTDEGRESLYWNIPIANTSCLLLGSGTSITQAAMRELSKAGVMVGFCSGGGTPLFNGTEAEIGCEFFSPQSEYRPVMYLQQWCKFWFDDEKRLAVAKALQQQRLALLEPIWSKLEWVYSCEKLTALVTQYQHEFAQAAHSQALLAAEGRLTTKLYALANQATMNEPDFKRSERGKSIDLVNQFLDHGNYLAYGLGATACWVLGLPHGLAVLHGKTRRGGLVFDAADIIKDSMILPQAFISAQNGDSEKEFRQACIQNLLRFGALDIIIERLQQLALQGASDEYFAG
>NZ_CP015572.1|WP_014325848.1|1518471_1521792_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLVSQCQKNALTETRRILDQFAERCGDRVWQTAITQAGLETLYKMLRQTARKNTAVACYWTHRKNSAELLWIVGDRRQFNDQGRVPTNRTQRNILRAEEEIAWQDAYSLQILTALSALLHDVGKSSVGFQTKLDKTKNAPRVADSYRHEWISVRLFEAMIEGCQTDQAWLERLANWQVFEETNPTWFSKIIQDRPNENHFSDFAYLPPLARRVIWLITSHHRLPFTHDISRSQDCIKNLRKYAKLTFESLFKAYKPAVGWVSNGAEHPTPQAFWQFQRVATQSQAWQKHMARWAKKALNHPALFSVSENADPFLLLLARLCLMTGDHYYSAQDQNEKLGELNFPLLANTYRENHQPKQRLDEHLIGVCQTAVRFARLLPKFPRELPRIKQHKPFVQLAKDRFAWQNKAVNVARLLQKTSESQGFFGVNMASTGCGKTLANAKMMYALNDSKQGARFTIALGLRVLTLQTGSALKKRLHLSDQDLAVLVGGSAVKKLYALQQEKQNQLAQQGSESAEDWLEDMQVEGATYIESAVENEAVLSFLSKDDKTKKLLYAPIVSCTLDHLISASESVRGGHHIVPILRLLTSDLILDEPDDFAQEDLPALSRLVYLAGLFGSRVLLSSATLTPDFITGLFKAYQAGRKIYNQQKGIVAALPICCAWVDEFQQVQANCGQDEQFIQQHDEFVRKRAENLAKSPVRRQAEILSLPSLKPREGEDLHYGLLADTLLQKAMALHDLHGQTDPHSQKKVSVGLIRFSNIEPMIPLAKALFALQASEKFADYQVHLCCYHSRQLLLLRSYLEEKLDKILDRHTPEQLFQHEEIALPMSQYKAKNHLFIVLGSPVTEVGRDHDYDWAIVDPSSMRSIIQLAGRVWRHRAEKVAEQPNIALLPINWRGLKVRYQQKDVIYHRPGFESHQHKLATHKLDQLISQRDLAHIQATPRIVKPEVLQASTQLADLEHHAIASLLNHPSENLVNLYWDPRYCNYLLANLPLMSEFRKSMAELEVVCVPDEDSHWGFGFYRAQKRDEETLSALPEIQYEPIQQDKHAVVQPWLAAALDTVLSDLAEQLNVVSPEWIAPTYLCASLPQYDGKLDWHYNEVYGFW
>NZ_CP015572.1|WP_005753664.1|1516557_1518414_-|response-regulator
MKNIKYFTQKYVDWVIRLGRLRFSILGVIVLAILALCTQALLSLFIIGEVYWVDMIRSVVFGLISAPFVIYFFTVLVEKLERSRLGLAKMVENLRKEVSERVLAEKKLSIALDNIEKTSRDKTRLMATISHELRTPLNGIIGLSRILLDEKLTETQQNYLKTIHVSAISLGHIFSDIIDLEKIDARRIELNAKAVELNSFLNDISNVARLLAQQKKLAFQLVTDKNLPTWFMVDYARLSQILWNLIGNAVKFTQEGRITLNVKRVSEYQISFSVSDTGIGIPANELPRVFEMYYQVQSSGHKPLGSGIGLAISQTIAQLMGGDLYATSEMGKGSCFTLMLPVKEVEKPVRVQNQMPSTLNILLVEDIEVNVVVAKSVLEKLGYVVDVAMTGQQAIEKFEQQYYDLLLLDIQLPDMSGFAVAKYLREGYENGQYDFLPPLIALTANVMHDKKEYQAQGMDDVLRKPLSIEELTACLVEYFGHDVSLCLETPTTHQITQDATHFDVKMLSELVEMLGTDFVLKNLALFKETMPEYMQALMTAYSVYQQDESQKADVLSCAHKIKGAAASVGLKRIQQIAAQAQDPEQGEWTENIHDWVQQLAQYWLLDVEALERYLNKSV
>NZ_CP015572.1|WP_005725867.1|1515826_1516417_-|hypothetical-protein
MKIFAVLSAFLMPFVVPNTTVNGYKDLRFGMTIEQAKETKLCEDQWHLPADDDWRRVVRGYWVCDKFRFDDGYAVARLRFIGGQLKSIELKMPEYPKYPAELLLHVLEEKYGKTIEVEQRDLIEEDILQGKIRKRRKNESALLDTYQFAKGTVSLTLLTYNGIPQPAEIIYSAPELLLLEKKLEDRPQRRTLLRDL
>NZ_CP015572.1|WP_014325849.1|1514959_1515763_+|inositol-1-monophosphatase
MNPMLNIAIRAARKAGNVIAKGYERRDALQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEESGALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDLAGTVLTTGFPFKQTRLMPMQFAMMNNLIQDCADFRRMGSAALDLCYVAAGRVDGYFEVGVKAWDIAAGDLIVREAGGLVCDFNGGHSYLTSGHLVAAAPRIVKEILNKIQPCLSDEFKK
>NZ_CP015572.1|WP_014325850.1|1514029_1514746_-|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVIGTSARLRHLQNSLIEPRECGTHAIVYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAFLSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
>NZ_CP015572.1|WP_005721326.1|1513486_1513951_-|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MKLTSKGRYAVTAILDIALNSNRGPVSLSDISERQHISLSYLEQLFAKLRRHGLVKSVRGPGGGYQLGLPANRISVGMVINAVNENIDVTRCLGRGDCQEGTECLTHSLWKELSLRIEAFLNEITLEELVEKNRQKRATIEFRGDFDNLIILDN
>NZ_CP015572.1|WP_005721328.1|1512224_1513439_-|IscS-subfamily-cysteine-desulfurase
MKLPIYLDYAATCPVDERVAKKMMEYLTVEGNFGNPASRSHKFGWQAEEAVDVARNHIADLIGADSREIVFTSGATESDNLAIKGAAHFYQSKGKHIITCKTEHKAVLDTCRQLEREGFEVTYLNPKSDGLIDLEELKNAMRDDTILVSIMHVNNEIGVIQDIAAIGELCRARKILFHVDATQSVGKLPINLAELKVDLMSMSSHKLYGPKGIGALYVSRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRICKEEMASEMPRLKALRDRLYNGLKDIEETYVNGSMEHRLDSNLNISFNYVEGESLMMALRDIAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRYTTEEEIDYTIELVKNAVAKLRELSPLWDMFKEGIDLNTIEWTHH
>NZ_CP015572.1|WP_005721377.1|1511606_1511993_-|Fe-S-cluster-assembly-scaffold-IscU
MAYSNKVIDHYENPRNVGSLDKKDANVGTGMVGAPACGDVMQLQIKVSEEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDEAQAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKKEAK
>NZ_CP015572.1|WP_005721379.1|1511213_1511537_-|iron-sulfur-cluster-assembly-protein-IscA
MGISLTETAADRVRTFLANRGKGIGLRLGIKTSGCSGLAYVLEFVDELNPEDQVFEQHGVKIIVDAKSLVYLDGTELDFAKEGLNEGFKFNNPNVKDQCGCGESFHV
>NZ_CP015572.1|WP_014325847.1|1524111_1524672_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MTTHYIELKAIPQMDMLQSEVIGHCMQILHQFLPHFEGRVGVAFPAYGLGRTLGGIVRLFANQEDCNQLHQQLLRSGLSDYALISEVSKTPLSTECRSYSRVHRKGQSAIRRTEKRLKSQGRWDESIRADMQQRQQNVAFFPHCHLKSASTGQRFILAVKENRMPQSCVGVFNAYGLSNSATVPHF
>NZ_CP015572.1|WP_014325846.1|1524674_1525682_-|type-I-F-CRISPR-associated-protein-Csy3
MSKLSTPSVLAFERNLDISDAIFAQKDSKNDKDAPVPLRIREKSVRGTISNRLKNTITNDPAKLDAETEKANLQRVDVATLDDDKDTLVATFSVKVLPFTGRPNVCNDQDYQHQVMTTVAQYLSEQGMDELAKRYATNIANARWLWRNRMGAEKIKIEVTCGENTLHFDDAKQFSLNHFDHQDDKIHQIAKEIKQGLLGEKFVILYVTAYANMGYGQEVYPSQELVLDNSTNNRKSKILYEINQKAGMHSQKVGNAIRTIDTWYAEEVAFPIAAEPYGAVTTLGTAFRQPKTKKNDFYTLFDNWLLKGEVPPVEQQHYVMSVLIRGGVFGASGKE
>NZ_CP015572.1|WP_016504384.1|1525684_1526668_-|type-I-F-CRISPR-associated-protein-Csy2
MFQTDFYILFDHIKVQSANAISGPLSYGFPALTGLTGAMHALNRKLTHHPVQFGGVMVACHDYELQTYQNSAFSDRTFKQTRNPIKRNGETASIIEEGKIHLDLSLVVEVHVQDDRVFEALTDKTSQASQDFLQTCKNLLWQQRIAGGSVLEIGNVQLFNLEEDQDIPLALMPAFVLMDAKQELTNITEELKTGLRIGQLDEEGNVQKSCLPSCPDATALDALLEMATVHHIPEHANATASAWQTYSVKKGRGWLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLGKWVFPLSLPENLSQCFWRYTALQNNLYLISQGE
>NZ_CP015572.1|WP_016504385.1|1526677_1528012_-|type-I-F-CRISPR-associated-protein-Csy1
MSHTFRKRIDLFLQEQNLKKSESDRKKLAKATDPTEIEQLTQLIQEFDQKYQFDTWIANAANVMAKQLKFGTHIAKGIHPDTKGDNVNFQPSDSLPPEYVGSQSVSHLVLDANGNAAALPLASFFNFIVDEEKQVKLRDLLLADDPRLAGCFSDDLALSDVYKKQFQQALTGDLTQPETHERNKQVFWANGENPIEDDDYTCLIPLYPSSLTHAFYQKVNNNRYSEQNKQARENRQKKTVEQTHYLSINQLATVVLGGSKPQNISQLMSAQGGRNYLLPSLPPIIPSSRYFRLSPLQTTIFNDRLAYACRYGLRQLFEVVEARKNVYQVRDSRIDALNNILRTFLFHANLLQKQPAGWSKDSQLEMCEKYWLDPKRVHLPDEEAFRAEYEKGEWVAEVERRFALWLNKRLQKRFPHIAKDFDDVEYHEWRRNIRRTLRYRLRHP
>NZ_CP015572.1|WP_014325843.1|1528242_1530402_-|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL
MKQLFATTARGFEELLKVELTDLGAMDCQITQGGVHFHADEETQYRVLLWTRLASRILLPIVTCKVYSDLDLYSAVVGQNWLDYFDEKAHFMVDFNGTNREIRHTQFGAMRVKDGIVDYFERVGKPRPNVDKSQPDIRIHAYLNREELVISLDLSGDALHMRGYREDTGKAPLRETLAAAIVLRSGWQLGTPLVDPMCGSGTLLIEAAQMQANIAPQLHRLHWGFDFWKGHNQQAWDKVKGEAIELAEQTFNQNQKANFYGCDLDHRVLQKAKRNAQNAGVAHLIQWRQGDVAALKNPFVEAKGTVICNPPYGERLGTTPALIALYSVFGQRLKQQFADWNVSIFSGEPALLDCLRLRSHRQFKAKNGPLDCVQKNYHISARATASDENTQNLPEIDRTLSATQVAVDFANRLQKNSKKIEKWARQQGINAYRLYDADLPEYNLAVDRYDDHIVVQEYAAPKNIDENKARQRLLDAVTATLQVTGVETNKLILKVRQKQKGTNQYEKLANKGDYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMLGKMAKGKDVLNLFAYTGSATVHMALGGAKSTTTVDMSNTYLNWAEQNLLLNDLEGKQHKLIQADCLQWLARCDRQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMTQLKRILRPNGTIVFSNNKRGFKMDVEGLETLGLSAVDITAKTLPLDFERNKQIHNCWVVRLKADL
>NZ_CP015572.1|WP_014325842.1|1530535_1532584_-|methionine--tRNA-ligase
MANSARDILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLGITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLKESEHFFFDLPAFEGMLKAWIKSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFKIPDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLFWPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLNNRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPELLAEFVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMALQLFRVLAIYLKPVIPQIIARAEAFLQDELTWESLNRPLLNHAILPFKALAQRLDLKQIEAIVNETKEQFVAQQALEQKNSAKAEPASQVEPIAETISIEDFAKLDLRVAKVMKCEAVPESNKLLRFELDLGDHTRQVFSGIKEAYNNPAELEGRFVVVIANLAPRKMRFGVSEGMILSAGTGGDDLFLLNADQGVKPGMQVK
>NZ_CP015572.1|WP_014325841.1|1532765_1533878_+|iron-sulfur-cluster-carrier-protein-ApbC
MGILFSDSLTDSQKQAIQNTFQQFQHPSLQKDLVSLNAIKKIEKGGETLRIEISMPFAWNTAFEQLKSALSTELLTLAECKDIKWQLNYQIATLKRANSHPAVKGVKNIIAVTSGKGGVGKSTISVNLALALQRQGARVGILDADIYGPSIPHMLGVADQRPTSPDNQHITPIQAHHIFANSIGFLMEPDNATIWRGPMASSALSQLLQETLWPDLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGVAMFERVSVPVLGIIENMSMHICSNCGHQETIFGTGGAERIAQKYNVKVLGQQALHIRLREDLDKGIPTVVAAPESDIAQSFMQLAEKVATELYWQGSVIPSEIMFKEVK
>NZ_CP015572.1|WP_005721273.1|1534016_1534286_-|30S-ribosomal-protein-S15
MSLSTEKKAAIVAEFGRDAKDTGSSEVQIALLTAQINHLQSHFATHKKDHHGRRGLLRMVSRRRKLLDYLKRTNLELYTSTIARLGLRR
>NZ_CP015572.1|WP_014325840.1|1534452_1537356_-|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MRTTTIKFSAITLALLSYCGTILADSHQEATELDTITVSSQQDEMNIKEKKIGETVKTASQLKRQQVQDSRDLVRYETGVTVVEAGRFGSSGYAIRGVDENRVAITVDGLHQAETLSSQGFKELFEGYGNFNNTRNSVEIETLKVAKIAKGADSVKVGSGSLGGAVLFETKDARDFLTEKDWHIGYKAGYSTADNQGLNAVTLAGRYQMFDALIMHSKRHGHELENYDYKNGRDIQGKEREKADPYTITKESTLVKFSFSPTENHRFTVASDTYLQHSRGHDLSYNLVATTHIQLDEKESRHANDLTKRKNVSFTYENYTVTPFWDTLKLSYSQQRITTRARTEDYCDGNELCDSYKNPLGLQFKDGQILDPAGNKIKLQGSGLSTQIVDENGKPFPTTTGTNNAAFSNNLRLRPTGFWLDCSVFDCNKPFTVYNISNGTYQAREVLLSEEITVDGKLYKTAKEEGGLPNYLILPNSKGYLPYDYKERDLNTNTKQINLDLTKTFLTFNIENNLSYGGVYSRIEKEMINKAGYEGRNPTWWADRILGQSSYCGYNALKCPKHEPLTSFLIPVEATTQSLYFANILKVHNMISIDLGYRYDHIKYNPEYTPGVTPKIPDDMVKGLFIPMPKEPQLKDFDYNYAKFGEAYKKWKEYLPKNAEENIAYIAQDKTFKKHSYSLGATFDPLNFLRVQVKYSKGFRAPTSDELYFTFKHPDFTILPNPVLKPEEAKNQEIALTVHDNWGFVSTSVFQTKYRHFIDLAYLGSRNLSNSVGGQAQARDFQVYQNVNVDNAKVKGLEINARLNLGYFWHVLDGFNTSYKFTYQRGRLDGDRPMNAIQPKASVFGLGYDHKENKFGADLYITRVSEKKAKDTYNMFYKEQGYKDSAVRWRSDDYTLVDAVGYIKPIKNLTLQFGVYNLTDRKYLTWESARSIKPFGTSNLINQKTGAGINRFYSPGRNFKLSAEITF
>NZ_CP015572.1|WP_005751227.1|1537397_1537913_-|heme-utilization-protein-HutZ
MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDESQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVSFVHLVEGHQE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015572_1	1.8\|247275\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247275-247306	32	NC_008193	Pasteurella phage F108, complete genome	7600-7631	0	1.0
NZ_CP015572_1	1.8\|247275\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247275-247306	32	DQ114220	Bacteriophage F108, complete genome	7600-7631	0	1.0
NZ_CP015572_1	1.4\|247035\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247035-247066	32	MH238467	Pasteurella phage Pm86, complete genome	53406-53437	1	0.969
NZ_CP015572_1	1.18\|247875\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247875-247906	32	MH238466	Pasteurella phage AFS-2018a, complete genome	23770-23801	1	0.969
NZ_CP015572_1	1.21\|248055\|32\|NZ_CP015572\|CRISPRCasFinder,CRT	248055-248086	32	MH238467	Pasteurella phage Pm86, complete genome	42601-42632	1	0.969
NZ_CP015572_1	1.5\|247095\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247095-247126	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	31794-31825	2	0.938
NZ_CP015572_1	1.5\|247095\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247095-247126	32	NC_047831	Pasteurella phage PHB02, complete genome	5648-5679	2	0.938
NZ_CP015572_1	1.19\|247935\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247935-247966	32	NC_008193	Pasteurella phage F108, complete genome	11445-11476	2	0.938
NZ_CP015572_1	1.19\|247935\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247935-247966	32	DQ114220	Bacteriophage F108, complete genome	11445-11476	2	0.938
NZ_CP015572_1	1.2\|246915\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246915-246946	32	MH238467	Pasteurella phage Pm86, complete genome	19220-19251	5	0.844
NZ_CP015572_1	1.4\|247035\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247035-247066	32	JX157235	Uncultured phage contig22 genomic sequence	395-426	5	0.844
NZ_CP015572_2	2.12\|1523611\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523611-1523642	32	NZ_CP017756	Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence	73488-73519	5	0.844
NZ_CP015572_1	1.10\|247395\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247395-247426	32	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	521041-521072	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_KX086582	Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence	25794-25825	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_KF831355	Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence	23170-23201	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_AP018563	Staphylococcus argenteus strain 58113 plasmid p1, complete sequence	18411-18442	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NC_013327	Staphylococcus aureus plasmid pWBG749, complete sequence	26168-26199	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	CP030569	Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence	12940-12971	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	CP030458	Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence	15652-15683	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_AP017923	Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence	17835-17866	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NC_013325	Staphylococcus aureus plasmid pWBG745, complete sequence	13088-13119	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	CP030696	Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence	28191-28222	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	CP030710	Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence	7547-7578	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_CP012757	Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence	37721-37752	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_CP042004	Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence	11471-11502	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_CP047857	Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence	26882-26913	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_CP012594	Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence	9160-9191	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_MH587575	Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence	17922-17953	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	NZ_MH587574	Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence	17842-17873	6	0.812
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	CP030603	Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence	34556-34587	6	0.812
NZ_CP015572_1	1.4\|247035\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247035-247066	32	NZ_CP054008	Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed3	2771-2802	7	0.781
NZ_CP015572_1	1.4\|247035\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247035-247066	32	NZ_CP054008	Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed3	20238-20269	7	0.781
NZ_CP015572_1	1.4\|247035\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247035-247066	32	NZ_LR134420	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 11	28159-28190	7	0.781
NZ_CP015572_2	2.11\|1523551\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523551-1523582	32	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	465830-465861	7	0.781
NZ_CP015572_2	2.11\|1523551\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523551-1523582	32	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	650120-650151	7	0.781
NZ_CP015572_2	2.11\|1523551\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523551-1523582	32	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1110688-1110719	7	0.781
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK415404	CrAssphage FA1-2_000172F, complete genome	45432-45463	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MW067003	CrAssphage sp. C0531BW4, complete genome	33590-33621	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK238400	CrAssphage ZA, complete genome	33722-33753	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK415403	CrAssphage ES_ALL_000190F, complete genome	46204-46235	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK415410	CrAssphage YS1-2_2437, complete genome	47780-47811	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK415399	CrAssphage apr34_000142F, complete genome	43680-43711	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MK069403	UNVERIFIED: CrAssphage sp. O-152, partial genome	22001-22032	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	BK010471	TPA_asm: Uncultured crAssphage, complete genome	33591-33622	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MW067002	CrAssphage sp. C0526BW15, complete genome	32845-32876	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	NC_024711	Uncultured crAssphage, complete genome	33591-33622	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	JQ995537	Uncultured phage crAssphage, complete genome	33591-33622	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MT006214	CrAssphage LMMB, complete genome	33783-33814	8	0.75
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	MK905543	Vibrio phage USC-1, complete genome	55483-55514	8	0.75
NZ_CP015572_1	1.20\|247995\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247995-248026	32	MK358448	Vibrio phage 5, complete genome	209261-209292	8	0.75
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	MN694758	Marine virus AFVG_250M853, complete genome	27038-27069	8	0.75
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	MN694774	Marine virus AFVG_250M941, complete genome	26488-26519	8	0.75
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	MN694077	Marine virus AFVG_250M852, complete genome	27041-27072	8	0.75
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	MN693487	Marine virus AFVG_25M100, complete genome	6473-6504	8	0.75
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	MN694586	Marine virus AFVG_250M370, complete genome	8206-8237	8	0.75
NZ_CP015572_2	2.17\|1523912\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523912-1523943	32	NC_021561	Vibrio phage pYD38-B genomic sequence	5301-5332	8	0.75
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MN694061	Marine virus AFVG_250M743, complete genome	3831-3862	9	0.719
NZ_CP015572_1	1.3\|246975\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246975-247006	32	MK962630	Achromobacter phage vB_AxyP_19-32_Axy11, complete genome	66465-66496	9	0.719
NZ_CP015572_2	2.7\|1523311\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523311-1523342	32	LN846932	Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome	1949-1980	9	0.719
NZ_CP015572_2	2.14\|1523731\|33\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523731-1523763	33	NC_048656	Klebsiella phage vB_KpnM_BIS47, complete genome	11367-11399	9	0.727
NZ_CP015572_2	2.15\|1523792\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523792-1523823	32	AM087120	Acidianus filamentous virus 3, partial viral genome	1603-1634	9	0.719
NZ_CP015572_2	2.15\|1523792\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523792-1523823	32	MN693550	Marine virus AFVG_25M93, complete genome	8160-8191	9	0.719
NZ_CP015572_2	2.16\|1523852\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523852-1523883	32	AM087120	Acidianus filamentous virus 3, partial viral genome	1603-1634	9	0.719
NZ_CP015572_2	2.16\|1523852\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523852-1523883	32	MN693550	Marine virus AFVG_25M93, complete genome	8160-8191	9	0.719
NZ_CP015572_1	1.1\|246855\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	246855-246886	32	MN694380	Marine virus AFVG_250M409, complete genome	37967-37998	10	0.688
NZ_CP015572_1	1.13\|247575\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247575-247606	32	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	123274-123305	10	0.688
NZ_CP015572_2	2.6\|1523251\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523251-1523282	32	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	505837-505868	10	0.688
NZ_CP015572_2	2.12\|1523611\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523611-1523642	32	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	284092-284123	10	0.688
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	5680-5711	10	0.688
NZ_CP015572_2	2.13\|1523671\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523671-1523702	32	GU943040	Uncultured phage MedDCM-OCT-S09-C28 genomic sequence	16896-16927	10	0.688
NZ_CP015572_2	2.17\|1523912\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	1523912-1523943	32	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	188762-188793	10	0.688
NZ_CP015572_1	1.8\|247275\|32\|NZ_CP015572\|PILER-CR,CRISPRCasFinder,CRT	247275-247306	32	MK496701	Capybara microvirus Cap1_SP_93, complete genome	2200-2231	11	0.656

1. spacer 1.8|247275|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttgatcgtttgcgcgaaataccaattttttta	CRISPR spacer
ttgatcgtttgcgcgaaataccaattttttta	Protospacer
********************************

2. spacer 1.8|247275|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttgatcgtttgcgcgaaataccaattttttta	CRISPR spacer
ttgatcgtttgcgcgaaataccaattttttta	Protospacer
********************************

3. spacer 1.4|247035|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969

gctgtataagcggttaaaaaagttatattttt	CRISPR spacer
gctgaataagcggttaaaaaagttatattttt	Protospacer
**** ***************************

4. spacer 1.18|247875|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 1, identity: 0.969

agctttaagctctgcaaatgccgaactcatac	CRISPR spacer
agctttaagctctgcaaatgccgaactcatgc	Protospacer
******************************.*

5. spacer 1.21|248055|32|NZ_CP015572|CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969

taaagcgatcttggctcgattatcagattggt	CRISPR spacer
taaagcgattttggctcgattatcagattggt	Protospacer
*********.**********************

6. spacer 1.5|247095|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 2, identity: 0.938

attatttctttcaggtgttggggggattgaat	CRISPR spacer
attatttctctcgggtgttggggggattgaat	Protospacer
*********.**.*******************

7. spacer 1.5|247095|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 2, identity: 0.938

attatttctttcaggtgttggggggattgaat	CRISPR spacer
attatttctctcgggtgttggggggattgaat	Protospacer
*********.**.*******************

8. spacer 1.19|247935|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 2, identity: 0.938

gattattttaagcaacggagcggaattacact	CRISPR spacer
gattattttaagcaatggcgcggaattacact	Protospacer
***************.** *************

9. spacer 1.19|247935|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 2, identity: 0.938

gattattttaagcaacggagcggaattacact	CRISPR spacer
gattattttaagcaatggcgcggaattacact	Protospacer
***************.** *************

10. spacer 1.2|246915|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 5, identity: 0.844

ctcaagaacacggtcacaattacacacaaacc	CRISPR spacer
cagcggaacacggtcacaattacacgcaaacc	Protospacer
*   .********************.******

11. spacer 1.4|247035|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to JX157235 (Uncultured phage contig22 genomic sequence) position: , mismatch: 5, identity: 0.844

-gctgtataagcggttaaaaaagttatattttt	CRISPR spacer
cgttgtat-agccgttaaaatagttatattttg	Protospacer
 *.***** *** ******* ***********

12. spacer 2.12|1523611|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017756 (Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

agggcatg-gattttcggcactggaaatcgaat	CRISPR spacer
-gggcaagccattttcggcaccagaaatcgaat	Protospacer
 ***** *  ***********..**********

13. spacer 1.10|247395|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 6, identity: 0.812

aaaatct---ctggaatttgtcgcatattgccttt	CRISPR spacer
---atctgacttgggatttgtcgcatattgcattt	Protospacer
   ****   .***.**************** ***

14. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX086582 (Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

15. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KF831355 (Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

16. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

17. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_013327 (Staphylococcus aureus plasmid pWBG749, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

18. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP030569 (Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

19. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP030458 (Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

20. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

21. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

22. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP030696 (Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

23. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

24. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012757 (Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

25. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042004 (Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

26. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047857 (Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

27. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012594 (Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

28. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH587575 (Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

29. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

30. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gtcatcttccaattcttctgttttctgctctt-	CRISPR spacer
gtcatattcaaattcttctg-tttctaccgtta	Protospacer
***** *** ********** *****.*. **

31. spacer 1.4|247035|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054008 (Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed3) position: , mismatch: 7, identity: 0.781

gctgtata-agcggttaaaaaagttatattttt	CRISPR spacer
-ttctacagagcggtcaaaaaatttatattttc	Protospacer
 .* **.* ******.****** *********.

32. spacer 1.4|247035|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054008 (Staphylococcus hominis strain FDAARGOS_762 plasmid unnamed3) position: , mismatch: 7, identity: 0.781

gctgtata-agcggttaaaaaagttatattttt	CRISPR spacer
-ttctacagagcggtcaaaaaatttatattttc	Protospacer
 .* **.* ******.****** *********.

33. spacer 1.4|247035|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134420 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 11) position: , mismatch: 7, identity: 0.781

gctgtataagcggttaaaaaagttatattttt-	CRISPR spacer
gctataaaagcggttaaaaaag-tagatgatgg	Protospacer
***.** *************** ** **  *

34. spacer 2.11|1523551|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 7, identity: 0.781

gattgtcagccgttagttgaacacgtcattat	CRISPR spacer
tatgttcagccgatagttgaacacgtcagaaa	Protospacer
 **  ******* ***************  *

35. spacer 2.11|1523551|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 7, identity: 0.781

gattgtcagccgttagttgaacacgtcattat	CRISPR spacer
tatgttcagccgatagttgaacacgtcagaaa	Protospacer
 **  ******* ***************  *

36. spacer 2.11|1523551|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 7, identity: 0.781

gattgtcagccgttagttgaacacgtcattat	CRISPR spacer
tatgttcagccgatagttgaacacgtcagaaa	Protospacer
 **  ******* ***************  *

37. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK415404 (CrAssphage FA1-2_000172F, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

38. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MW067003 (CrAssphage sp. C0531BW4, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

39. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK238400 (CrAssphage ZA, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

40. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK415403 (CrAssphage ES_ALL_000190F, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

41. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK415410 (CrAssphage YS1-2_2437, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

42. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK415399 (CrAssphage apr34_000142F, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

43. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK069403 (UNVERIFIED: CrAssphage sp. O-152, partial genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

44. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to BK010471 (TPA_asm: Uncultured crAssphage, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

45. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MW067002 (CrAssphage sp. C0526BW15, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

46. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_024711 (Uncultured crAssphage, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

47. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to JQ995537 (Uncultured phage crAssphage, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

48. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MT006214 (CrAssphage LMMB, complete genome) position: , mismatch: 8, identity: 0.75

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tacttaaagatgtaatgggtactgttgaagaa	Protospacer
 * .*** ************* *****.. **

49. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK905543 (Vibrio phage USC-1, complete genome) position: , mismatch: 8, identity: 0.75

gtcatcttccaattcttctgttttctgctctt	CRISPR spacer
atcgtcttccaattcttctgtttcctcagact	Protospacer
.**.*******************.**    .*

50. spacer 1.20|247995|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK358448 (Vibrio phage 5, complete genome) position: , mismatch: 8, identity: 0.75

gtcatcttccaattcttctgttttctgctctt	CRISPR spacer
atcgtcttccaattcttctgtttcctcagact	Protospacer
.**.*******************.**    .*

51. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 8, identity: 0.75

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
cctccctcgacctttaaatcttctagtgtttt	Protospacer
..*.*  .**** ******************.

52. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694774 (Marine virus AFVG_250M941, complete genome) position: , mismatch: 8, identity: 0.75

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
cctccctcgacctttaaatcttctagtgtttt	Protospacer
..*.*  .**** ******************.

53. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 8, identity: 0.75

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
cctccctcgacctttaaatcttctagtgtttt	Protospacer
..*.*  .**** ******************.

54. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN693487 (Marine virus AFVG_25M100, complete genome) position: , mismatch: 8, identity: 0.75

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
cctccctcgacctttaaatcttctagtgtttt	Protospacer
..*.*  .**** ******************.

55. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694586 (Marine virus AFVG_250M370, complete genome) position: , mismatch: 8, identity: 0.75

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
cctccctcgacctttaaatcttctagtgtttt	Protospacer
..*.*  .**** ******************.

56. spacer 2.17|1523912|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_021561 (Vibrio phage pYD38-B genomic sequence) position: , mismatch: 8, identity: 0.75

ttgcggcta----aacgttcacaagttttttgttgt	CRISPR spacer
----gattactctaaagttcacaagttttctgttgt	Protospacer
    *..**    ** *************.******

57. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694061 (Marine virus AFVG_250M743, complete genome) position: , mismatch: 9, identity: 0.719

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tatctaatgatgtaatggatactgttgaaagt	Protospacer
 * ***************.** *****.. .

58. spacer 1.3|246975|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK962630 (Achromobacter phage vB_AxyP_19-32_Axy11, complete genome) position: , mismatch: 9, identity: 0.719

taacgctaatttggcatctccggcttgttctg	CRISPR spacer
caccgctgctttggcatctccggcttcccgta	Protospacer
.* ****. ***************** .. *.

59. spacer 2.7|1523311|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 9, identity: 0.719

ttaattcatctgttcaagcgcaaggtgggctt	CRISPR spacer
aaaatacatctgttaaagcgcaaggaaagcaa	Protospacer
  *** ******** ********** ..**

60. spacer 2.14|1523731|33|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_048656 (Klebsiella phage vB_KpnM_BIS47, complete genome) position: , mismatch: 9, identity: 0.727

aaatgcaaacgcccatggtgccgtttcaacgac	CRISPR spacer
cgctgcaaacgccaatggtgacgtttccatcag	Protospacer
 . ********** ****** ****** *. *

61. spacer 2.15|1523792|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to AM087120 (Acidianus filamentous virus 3, partial viral genome) position: , mismatch: 9, identity: 0.719

ttcttttcttatattcgtcttttgtcacgaat	CRISPR spacer
ttcttttcttatattcgtcattttctttcctt	Protospacer
******************* *** .. .   *

62. spacer 2.15|1523792|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ttcttttcttatattcgtcttttgtcacgaat	CRISPR spacer
atctttttttatattcttcttttgataaaagc	Protospacer
 ******.******** ******* .* .*..

63. spacer 2.16|1523852|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to AM087120 (Acidianus filamentous virus 3, partial viral genome) position: , mismatch: 9, identity: 0.719

ttcttttcttatattcgtcttttgtcacgaat	CRISPR spacer
ttcttttcttatattcgtcattttctttcctt	Protospacer
******************* *** .. .   *

64. spacer 2.16|1523852|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ttcttttcttatattcgtcttttgtcacgaat	CRISPR spacer
atctttttttatattcttcttttgataaaagc	Protospacer
 ******.******** ******* .* .*..

65. spacer 1.1|246855|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MN694380 (Marine virus AFVG_250M409, complete genome) position: , mismatch: 10, identity: 0.688

aagctaatgatgtaatgggtaatgttgggcaa	CRISPR spacer
tttctaatgatgtaatggatactgttgaaagt	Protospacer
   ***************.** *****.. .

66. spacer 1.13|247575|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 10, identity: 0.688

acttccgcgaatttcgttaaaaaacgaccgca	CRISPR spacer
ttgtatatgaatttagttaaaaaaagaccgcc	Protospacer
 . * ...****** ********* ******

67. spacer 2.6|1523251|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gtagtgaatcttgcggataaacgtagcttaaa	CRISPR spacer
ctctacaatcttgcggataaccgtggctttgt	Protospacer
 *    ************** ***.**** .

68. spacer 2.12|1523611|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

agggcatggattttcggcactggaaatcgaat	CRISPR spacer
tcggcatggattttcggggctggaacagcagc	Protospacer
  *************** .******    *..

69. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
atttcgatgacggttaaatcttcttgccgcga	Protospacer
 ****.***** ************ *.  .

70. spacer 2.13|1523671|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to GU943040 (Uncultured phage MedDCM-OCT-S09-C28 genomic sequence) position: , mismatch: 10, identity: 0.688

ttttcaatgaccgttaaatcttctagtgtttc	CRISPR spacer
accgcctgaaccgttaaaagttctagtgtttc	Protospacer
 .. *   .*********  ************

71. spacer 2.17|1523912|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 10, identity: 0.688

ttgcggctaaacgttcacaagttttttgttgt	CRISPR spacer
agaaacataaacgttcatgagttttttgtttt	Protospacer
  . .  **********..*********** *

72. spacer 1.8|247275|32|NZ_CP015572|PILER-CR,CRISPRCasFinder,CRT matches to MK496701 (Capybara microvirus Cap1_SP_93, complete genome) position: , mismatch: 11, identity: 0.656

ttgatcgtttgcgcgaaataccaattttttta	CRISPR spacer
gcaccttcttgcgcgtaataccaattattttg	Protospacer
 .. .. .******* ********** ****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

338131 : 363901

Mannheimia_phage(61.11%)

head,transposase,tail,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005720092.1\|338131_338548_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.3e-48	63.5
WP_064775610.1\|338594_339731_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	3.8e-123	58.0
WP_064775609.1\|339870_340197_-	hypothetical protein	NA	NA	NA	NA
WP_081317749.1\|340244_346139_-	DUF1983 domain-containing protein	A0A0M3LQG1	Mannheimia_phage	1.6e-257	36.1
WP_042743292.1\|346142_346733_-\|tail	tail assembly protein	A0A0M3LQC4	Mannheimia_phage	3.1e-52	57.1
WP_064775658.1\|346675_347416_-	C40 family peptidase	A0A0M3LQI5	Mannheimia_phage	1.3e-84	60.0
WP_064775657.1\|347418_348123_-\|tail	phage minor tail protein L	A0A0M3LPR8	Mannheimia_phage	1.6e-82	64.1
WP_064775655.1\|350956_351652_-	hypothetical protein	NA	NA	NA	NA
WP_016533102.1\|351956_352286_-\|tail	phage tail protein	A0A0M3LQW6	Mannheimia_phage	4.8e-26	49.1
WP_016533103.1\|352655_353072_-	hypothetical protein	NA	NA	NA	NA
WP_016533104.1\|353144_354161_-	hypothetical protein	A0A0M3LQ19	Mannheimia_phage	7.6e-131	69.9
WP_015691079.1\|354173_354566_-	hypothetical protein	A0A0M3LQB6	Mannheimia_phage	5.5e-29	46.2
WP_015691078.1\|354565_354967_-	HK97 gp10 family phage protein	A0A0M3LPJ5	Mannheimia_phage	2.1e-39	61.4
WP_015691077.1\|354968_355343_-	hypothetical protein	NA	NA	NA	NA
WP_015691076.1\|355344_355812_-	hypothetical protein	A0A0M3LSP7	Mannheimia_phage	1.4e-34	55.7
WP_015691075.1\|355828_356065_-	hypothetical protein	NA	NA	NA	NA
WP_015691074.1\|356121_357279_-	hypothetical protein	G8C7P7	Escherichia_phage	8.3e-81	43.3
WP_015691073.1\|357296_358067_-	hypothetical protein	A0A1V0DY60	Dinoroseobacter_phage	1.5e-25	36.2
WP_015691071.1\|358402_358837_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	D0UIJ3	Aggregatibacter_phage	3.1e-41	61.2
WP_015691070.1\|358811_359030_-	hypothetical protein	NA	NA	NA	NA
WP_064775738.1\|359032_360634_-\|head	phage head morphogenesis protein	A0A0M3LQ07	Mannheimia_phage	3.3e-152	52.1
WP_064775653.1\|360623_362027_-	DUF4055 domain-containing protein	A0A0M3LQA1	Mannheimia_phage	4.4e-153	59.6
WP_064775652.1\|362036_363308_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	8.6e-148	61.7
WP_081273988.1\|363310_363901_-	hypothetical protein	A0A2H4J1J5	uncultured_Caudovirales_phage	4.9e-21	39.5

DBSCAN-SWA_2

367184 : 396033

Mannheimia_phage(20.69%)

integrase,transposase,holin

attL 363215:363230|attR 399151:399166

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
363215:363230	attL	NA	NA	NA	NA
WP_016533462.1\|367184_367769_-	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	6.5e-58	55.3
WP_016533461.1\|367740_368106_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_016569984.1\|368464_368620_-	hypothetical protein	NA	NA	NA	NA
WP_016533470.1\|368694_369060_-	hypothetical protein	A0A0M3LR87	Mannheimia_phage	3.5e-09	27.3
WP_064775605.1\|369059_369662_-	recombinase NinG	H6WRY9	Salmonella_phage	6.3e-32	38.2
WP_016533468.1\|369749_369962_-	hypothetical protein	NA	NA	NA	NA
WP_016569985.1\|370035_370494_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	5.8e-38	53.4
WP_041423202.1\|370483_371014_-	phage N-6-adenine-methyltransferase	A0A0M3LNW2	Mannheimia_phage	1.0e-54	58.9
WP_016533441.1\|371023_371713_-	replication protein P	D0UIL4	Aggregatibacter_phage	1.4e-32	34.1
WP_016533442.1\|371712_372615_-	hypothetical protein	A0A0U4JX08	Bacillus_phage	5.5e-32	37.7
WP_014390722.1\|372616_372970_-	HNH endonuclease	A0A1C9LVX4	Vibrio_phage	1.3e-08	33.6
WP_064775604.1\|372966_373668_-	DNA-binding protein	A0A2I7RHG4	Vibrio_phage	7.1e-35	55.8
WP_014391093.1\|373725_373953_-	hypothetical protein	NA	NA	NA	NA
WP_005720263.1\|374021_374231_-	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	5.5e-12	52.3
WP_064775603.1\|374358_375048_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.7e-73	58.2
WP_016533478.1\|375193_375457_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_016533477.1\|375459_375939_+	type II toxin-antitoxin system HicB family antitoxin	K7PJX6	Enterobacterial_phage	8.3e-19	47.1
WP_016533476.1\|375935_376319_+	hypothetical protein	NA	NA	NA	NA
WP_016533507.1\|376937_377168_+	hypothetical protein	A0A0M3LNV4	Mannheimia_phage	3.4e-10	52.8
WP_016533491.1\|377759_378305_+	hypothetical protein	NA	NA	NA	NA
WP_016570070.1\|378570_379218_+	hypothetical protein	Q7Y5V4	Haemophilus_phage	3.5e-36	64.2
WP_014390710.1\|379279_379591_-	hypothetical protein	NA	NA	NA	NA
WP_064775602.1\|379657_379942_+	hypothetical protein	NA	NA	NA	NA
WP_016570068.1\|379928_380165_+	hypothetical protein	NA	NA	NA	NA
WP_101766859.1\|380342_381323_+	hypothetical protein	A0A0M3LR66	Mannheimia_phage	3.4e-51	40.1
WP_016533454.1\|381326_382178_+	phage recombination protein Bet	A0A2H4JAQ4	uncultured_Caudovirales_phage	4.8e-62	63.9
WP_064775601.1\|382170_382782_+	YqaJ viral recombinase family protein	A0A0M3LPU0	Mannheimia_phage	6.3e-88	76.4
WP_016570065.1\|382785_383250_+	single-stranded DNA-binding protein	A0A2I7RK19	Vibrio_phage	6.1e-35	69.0
WP_016533530.1\|383261_383453_+	hypothetical protein	NA	NA	NA	NA
WP_016570064.1\|383495_383849_+	hypothetical protein	I6XKT1	Burkholderia_virus	1.7e-05	31.8
WP_014391448.1\|383920_384709_+	DUF2303 family protein	C5IHK3	Burkholderia_virus	3.2e-20	29.2
WP_064775647.1\|384759_385359_+	hypothetical protein	A0A218KC93	Bacillus_phage	3.9e-18	34.2
WP_016533502.1\|385355_385721_+	hypothetical protein	NA	NA	NA	NA
WP_080637896.1\|385708_385921_+	DUF551 domain-containing protein	NA	NA	NA	NA
WP_064775646.1\|385932_386421_+	DUF551 domain-containing protein	A0A0M3LS47	Mannheimia_phage	3.2e-34	51.2
WP_015691048.1\|386524_387433_+	hypothetical protein	A0A0M4S6X1	Salmonella_phage	2.5e-40	36.1
WP_064775645.1\|387677_387899_+	hypothetical protein	NA	NA	NA	NA
WP_014391442.1\|387909_388632_+	DNA-binding protein	G0ZND1	Cronobacter_phage	3.3e-35	52.5
WP_075271365.1\|388815_389118_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014391441.1\|389021_390077_+\|integrase	site-specific integrase	A0A077KGX2	Edwardsiella_phage	1.6e-62	37.9
WP_005725034.1\|390451_391306_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.8e-31	40.3
WP_014325726.1\|391882_392347_-\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	2.3e-13	36.1
WP_005719438.1\|392529_393030_-	single-stranded DNA-binding protein	I3PUY5	Vibrio_phage	4.0e-40	55.6
WP_014326374.1\|393201_396033_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.3
399151:399166	attR	NA	NA	NA	NA

DBSCAN-SWA_3

747052 : 756410

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014326208.1\|747052_748051_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-15	29.4
WP_005724065.1\|748067_749048_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-15	26.4
WP_005724066.1\|749124_749910_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_010906540.1\|749918_750710_-	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-17	29.7
WP_005753553.1\|750944_752498_+	murein DD-endopeptidase MepM	A0A2K9VGT1	Pontimonas_phage	8.4e-20	49.6
WP_005724296.1\|752573_753521_-	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	1.9e-43	38.7
WP_014326206.1\|753590_754478_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_005753554.1\|754477_755095_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_014326205.1\|755135_756410_-	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	1.8e-92	49.5

DBSCAN-SWA_4

1720181 : 1823277

112

Mannheimia_phage(41.67%)

transposase,tail,integrase,terminase,tRNA

attL 1777292:1777337|attR 1823382:1823427

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014325726.1\|1720181_1720646_-\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	2.3e-13	36.1
WP_005717387.1\|1720827_1721556_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	4.9e-31	38.1
WP_014325725.1\|1721621_1722290_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA
WP_014325724.1\|1722299_1722842_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.8e-23	45.7
WP_014325723.1\|1722904_1724215_-	porin	NA	NA	NA	NA
WP_005723236.1\|1724459_1724750_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_005723238.1\|1724797_1726459_-	putative transporter	NA	NA	NA	NA
WP_005723242.1\|1728548_1729103_+	DUF5358 domain-containing protein	NA	NA	NA	NA
WP_010907004.1\|1729320_1730976_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	7.4e-83	34.9
WP_014325722.1\|1731065_1732145_-	endonuclease	NA	NA	NA	NA
WP_014325721.1\|1732625_1733180_+	hypothetical protein	NA	NA	NA	NA
WP_005717426.1\|1733487_1734276_+	hemin ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014325720.1\|1734288_1735233_+	iron ABC transporter permease	NA	NA	NA	NA
WP_005723258.1\|1735244_1735982_+	ABC transporter ATP-binding protein	M1HP82	Acanthocystis_turfacea_Chlorella_virus	1.5e-14	32.5
WP_016504262.1\|1736127_1738557_-	TonB-dependent receptor	NA	NA	NA	NA
WP_014325718.1\|1739021_1740047_-	hypothetical protein	NA	NA	NA	NA
WP_014325717.1\|1741064_1742303_+	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	1.0e-12	25.6
WP_014325716.1\|1742316_1742889_+	hypothetical protein	NA	NA	NA	NA
WP_014325715.1\|1743304_1747198_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.7e-114	53.4
WP_005723276.1\|1747422_1747722_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_005723278.1\|1747702_1748707_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_005717441.1\|1748983_1749865_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_014325712.1\|1750007_1751441_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_005723282.1\|1751430_1751682_-	YhdT family protein	NA	NA	NA	NA
WP_005723284.1\|1751764_1753111_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_005717446.1\|1753212_1753674_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_005717447.1\|1753828_1754275_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_005717448.1\|1754345_1755359_-	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_005723289.1\|1755611_1756469_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_016504292.1\|1756579_1757833_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_095177582.1\|1758111_1759017_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_014325708.1\|1759047_1759311_+	hypothetical protein	NA	NA	NA	NA
WP_014325707.1\|1759328_1759952_+	glutathione S-transferase	NA	NA	NA	NA
WP_005751822.1\|1760082_1760463_+	hypothetical protein	NA	NA	NA	NA
WP_014325706.1\|1760492_1762562_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_014325705.1\|1762697_1764116_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_005723307.1\|1764444_1766016_+	AbgT family transporter	NA	NA	NA	NA
WP_005717460.1\|1766146_1766617_+	membrane protein FxsA	NA	NA	NA	NA
WP_005717461.1\|1766705_1766996_+	co-chaperone GroES	A0A221S322	uncultured_virus	4.5e-12	40.0
WP_014325704.1\|1767091_1768726_+	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	1.7e-188	68.6
WP_016504294.1\|1769578_1770376_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_014325702.1\|1770377_1770977_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.7e-17	33.5
WP_014325701.1\|1770994_1771843_+	ModD protein	NA	NA	NA	NA
WP_005754621.1\|1771942_1773775_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.8e-53	33.7
WP_005723318.1\|1773882_1774779_-	lipoprotein NlpI	NA	NA	NA	NA
WP_005723319.1\|1774862_1777007_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
1777292:1777337	attL	NA	NA	NA	NA
WP_005720092.1\|1777758_1778175_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.3e-48	63.5
WP_064775610.1\|1778221_1779358_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	3.8e-123	58.0
WP_064775609.1\|1779497_1779824_-	hypothetical protein	NA	NA	NA	NA
WP_069359803.1\|1779871_1784875_-	DUF1983 domain-containing protein	A0A0M3LQ61	Mannheimia_phage	6.2e-250	38.8
WP_014667799.1\|1784878_1785499_-\|tail	tail assembly protein	A0A0M3LQC4	Mannheimia_phage	1.1e-52	57.4
WP_016569980.1\|1785441_1786185_-	C40 family peptidase	A0A0M3LQI5	Mannheimia_phage	7.4e-83	59.6
WP_023430089.1\|1786189_1786903_-\|tail	phage minor tail protein L	A0A0M3LPR8	Mannheimia_phage	2.1e-82	63.9
WP_014390756.1\|1786992_1787322_-	Gifsy-1 prophage VmtM	S5MW28	Escherichia_phage	3.2e-14	37.1
WP_042743193.1\|1787324_1789769_-\|tail	tail length tape measure protein	A0A0M3LSE2	Mannheimia_phage	1.6e-150	57.0
WP_016533322.1\|1789827_1790223_-	hypothetical protein	A0A0M3LR23	Mannheimia_phage	7.7e-55	83.2
WP_016533321.1\|1790290_1790755_-	hypothetical protein	A0A0M3LR40	Mannheimia_phage	5.2e-34	50.0
WP_016533320.1\|1790785_1791457_-	hypothetical protein	A0A0M3LPR4	Mannheimia_phage	1.5e-42	42.9
WP_014390749.1\|1791510_1791993_-\|tail	phage tail protein	A0A0M3LPR0	Mannheimia_phage	2.0e-44	62.0
WP_016533319.1\|1792004_1792376_-	hypothetical protein	NA	NA	NA	NA
WP_014390747.1\|1792372_1792744_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.3e-24	51.2
WP_014390746.1\|1792748_1793093_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	3.0e-31	57.9
WP_042743192.1\|1793095_1793464_-	hypothetical protein	A0A0M3LQS8	Mannheimia_phage	4.7e-22	42.1
WP_101766867.1\|1793444_1793831_-	hypothetical protein	A0A0M3LR32	Mannheimia_phage	4.2e-13	73.9
WP_016533288.1\|1793841_1794840_-	hypothetical protein	A0A0M3LQZ1	Mannheimia_phage	9.1e-145	74.7
WP_016533289.1\|1794851_1795286_-	hypothetical protein	A0A0M3LPQ2	Mannheimia_phage	1.1e-54	75.7
WP_016533290.1\|1795285_1796632_-	hypothetical protein	A0A0M3LQ78	Mannheimia_phage	4.0e-127	55.3
WP_014390740.1\|1796646_1797618_-	hypothetical protein	F1C5D8	Cronobacter_phage	1.6e-53	41.0
WP_016533291.1\|1797571_1799017_-	DUF1073 domain-containing protein	A0A0M3LPQ5	Mannheimia_phage	2.4e-146	58.6
WP_016533292.1\|1799031_1800258_-\|terminase	PBSX family phage terminase large subunit	A0A0M3LTA2	Mannheimia_phage	9.4e-192	77.0
WP_014390737.1\|1800241_1800739_-\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.4e-47	70.7
WP_016533497.1\|1800821_1801004_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	3.8e-09	54.2
WP_014390736.1\|1801032_1801467_+	CopG family transcriptional regulator	A0A0R6PJ17	Moraxella_phage	1.0e-20	38.0
WP_064775606.1\|1801501_1801783_-	hypothetical protein	NA	NA	NA	NA
WP_014667795.1\|1801688_1802012_-	DUF2570 family protein	NA	NA	NA	NA
WP_014667794.1\|1801984_1802515_-	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.7e-45	50.9
WP_014391475.1\|1802511_1802772_-	hypothetical protein	NA	NA	NA	NA
WP_016569984.1\|1803130_1803286_-	hypothetical protein	NA	NA	NA	NA
WP_016533470.1\|1803360_1803726_-	hypothetical protein	A0A0M3LR87	Mannheimia_phage	3.5e-09	27.3
WP_064775605.1\|1803725_1804328_-	recombinase NinG	H6WRY9	Salmonella_phage	6.3e-32	38.2
WP_016533468.1\|1804415_1804628_-	hypothetical protein	NA	NA	NA	NA
WP_016569985.1\|1804701_1805160_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	5.8e-38	53.4
WP_041423202.1\|1805149_1805680_-	phage N-6-adenine-methyltransferase	A0A0M3LNW2	Mannheimia_phage	1.0e-54	58.9
WP_016533441.1\|1805689_1806379_-	replication protein P	D0UIL4	Aggregatibacter_phage	1.4e-32	34.1
WP_016533442.1\|1806378_1807281_-	hypothetical protein	A0A0U4JX08	Bacillus_phage	5.5e-32	37.7
WP_014390722.1\|1807282_1807636_-	HNH endonuclease	A0A1C9LVX4	Vibrio_phage	1.3e-08	33.6
WP_064775604.1\|1807632_1808334_-	DNA-binding protein	A0A2I7RHG4	Vibrio_phage	7.1e-35	55.8
WP_014391093.1\|1808391_1808619_-	hypothetical protein	NA	NA	NA	NA
WP_005720263.1\|1808687_1808897_-	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	5.5e-12	52.3
WP_064775603.1\|1809024_1809714_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.7e-73	58.2
WP_016533478.1\|1809859_1810123_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_016533477.1\|1810125_1810605_+	type II toxin-antitoxin system HicB family antitoxin	K7PJX6	Enterobacterial_phage	8.3e-19	47.1
WP_016533476.1\|1810601_1810985_+	hypothetical protein	NA	NA	NA	NA
WP_016533507.1\|1811603_1811834_+	hypothetical protein	A0A0M3LNV4	Mannheimia_phage	3.4e-10	52.8
WP_014391456.1\|1812058_1812322_+	hypothetical protein	NA	NA	NA	NA
WP_014391102.1\|1812409_1812943_+	hypothetical protein	NA	NA	NA	NA
WP_016569990.1\|1813404_1814040_+	antirepressor	A6XMM0	Bacillus_virus	2.1e-22	53.3
WP_014390710.1\|1814101_1814413_-	hypothetical protein	NA	NA	NA	NA
WP_064775602.1\|1814479_1814764_+	hypothetical protein	NA	NA	NA	NA
WP_016570068.1\|1814750_1814987_+	hypothetical protein	NA	NA	NA	NA
WP_101766859.1\|1815164_1816145_+	hypothetical protein	A0A0M3LR66	Mannheimia_phage	3.4e-51	40.1
WP_016533454.1\|1816148_1817000_+	phage recombination protein Bet	A0A2H4JAQ4	uncultured_Caudovirales_phage	4.8e-62	63.9
WP_064775601.1\|1816992_1817604_+	YqaJ viral recombinase family protein	A0A0M3LPU0	Mannheimia_phage	6.3e-88	76.4
WP_016570065.1\|1817607_1818072_+	single-stranded DNA-binding protein	A0A2I7RK19	Vibrio_phage	6.1e-35	69.0
WP_016533530.1\|1818083_1818275_+	hypothetical protein	NA	NA	NA	NA
WP_016570064.1\|1818317_1818671_+	hypothetical protein	I6XKT1	Burkholderia_virus	1.7e-05	31.8
WP_014391448.1\|1818742_1819531_+	DUF2303 family protein	C5IHK3	Burkholderia_virus	3.2e-20	29.2
WP_101766465.1\|1819581_1820181_+	hypothetical protein	A0A218KC93	Bacillus_phage	3.0e-18	34.2
WP_016570062.1\|1820315_1820849_+	DUF551 domain-containing protein	A0A0M3LS47	Mannheimia_phage	1.3e-20	36.6
WP_016533427.1\|1820858_1821158_+	hypothetical protein	NA	NA	NA	NA
WP_051127937.1\|1821456_1821729_+	hypothetical protein	A0A0M3LQA6	Mannheimia_phage	4.9e-08	41.1
WP_064775600.1\|1822104_1823277_+\|integrase	tyrosine-type recombinase/integrase	A0A059VF45	Pseudomonas_phage	5.9e-111	52.9
1823382:1823427	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015572

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection