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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017882 Bordetella pertussis strain I384 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP017882
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017882_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017882_2 433083-433176 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017882_3 996352-996446 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017882_4 1819810-1819937 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017882_5 3434589-3434698 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 219510 47 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) transposase,tRNA,protease NA
DBSCAN-SWA_4 225502 : 287973 54 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 651611 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656935 : 703126 51 uncultured_Caudovirales_phage(18.18%) tail,transposase,tRNA,terminase NA
DBSCAN-SWA_8 709292 : 763222 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 885811 : 953787 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 997316 : 1069835 59 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1073588 : 1135664 53 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_12 1153234 : 1219753 54 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1270681 : 1327892 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1418125 : 1470278 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_15 1514203 : 1582289 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_16 1618238 : 1673829 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831596 : 1890866 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_18 1901106 : 1945429 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1975208 : 2039577 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2171109 : 2220762 43 Synechococcus_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_21 2228486 : 2288497 60 uncultured_Caudovirales_phage(33.33%) transposase,protease NA
DBSCAN-SWA_22 2478116 : 2536360 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_23 2578638 : 2645138 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_24 2673253 : 2710665 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 2809792 : 2930169 97 Agrobacterium_phage(16.67%) transposase,protease NA
DBSCAN-SWA_26 2960555 : 3004246 41 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3384191 : 3437932 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3444087 : 3503385 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_29 3518323 : 3576396 47 Planktothrix_phage(12.5%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage