Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017924 Bordetella pertussis strain J173 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP017924
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017924_1 250588-250672 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017924_2 432029-432122 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017924_3 995297-995391 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017924_4 1819794-1819921 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017924_5 3431409-3431518 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 78584 49 Synechococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_2 107426 : 175251 56 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 178633 : 236268 47 Klosneuvirus(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_4 250682 : 303017 46 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 390852 : 448361 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589366 : 650557 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 655881 : 702072 50 uncultured_Caudovirales_phage(18.18%) tail,tRNA,transposase,terminase NA
DBSCAN-SWA_8 708238 : 762168 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 884756 : 952732 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996261 : 1068778 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1072531 : 1125459 43 uncultured_Mediterranean_phage(16.67%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1152176 : 1218695 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1291657 : 1337386 44 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_14 1417063 : 1469215 44 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_15 1513140 : 1573052 50 Streptococcus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_16 1618224 : 1673815 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831580 : 1890850 51 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_18 1901090 : 1944364 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1974137 : 2038506 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2174090 : 2228359 47 Klosneuvirus(15.38%) tRNA,transposase NA
DBSCAN-SWA_21 2576511 : 2643011 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2671126 : 2708538 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_23 2807665 : 2862182 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2870207 : 2926993 40 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_25 2967088 : 3001069 34 Bacillus_virus(50.0%) transposase NA
DBSCAN-SWA_26 3400874 : 3464706 46 Staphylococcus_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_27 3469120 : 3587013 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_28 3706387 : 3839313 114 uncultured_Mediterranean_phage(10.34%) integrase,tRNA,transposase attL 3751030:3751047|attR 3795670:3795687
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage