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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017925 Bordetella pertussis strain J203 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 32 0

Results visualization

1. NZ_CP017925
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017925_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017925_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017925_3 996351-996445 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017925_4 1819802-1819929 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017925_5 3429323-3429432 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164895 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233337 : 286925 47 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589371 : 650562 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655886 : 702077 50 uncultured_Caudovirales_phage(18.18%) tRNA,transposase,terminase,tail NA
DBSCAN-SWA_8 708243 : 762172 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 853050 : 913926 51 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_10 934673 : 998266 58 Bacillus_virus(15.38%) transposase NA
DBSCAN-SWA_11 1024378 : 1082463 51 uncultured_Mediterranean_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_12 1086509 : 1158529 56 Planktothrix_phage(18.18%) holin,tRNA,transposase NA
DBSCAN-SWA_13 1176316 : 1242310 51 Bacillus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1292712 : 1329477 36 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_15 1418119 : 1470272 44 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_16 1514197 : 1582282 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_17 1618231 : 1682068 53 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_18 1831588 : 1890858 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_19 1901098 : 1945421 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_20 1975194 : 2039563 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_21 2171091 : 2228369 49 Synechococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_22 2476001 : 2534245 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_23 2576522 : 2643022 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_24 2806626 : 2861143 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_25 2869168 : 2925953 40 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_26 2956339 : 3000030 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3184447 : 3246681 51 Xanthomonas_phage(33.33%) protease,transposase NA
DBSCAN-SWA_28 3265104 : 3317023 40 Tupanvirus(16.67%) holin,tRNA,transposase NA
DBSCAN-SWA_29 3398787 : 3443859 37 Staphylococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_30 3461603 : 3514008 47 Acinetobacter_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_31 3531126 : 3583878 45 Catovirus(11.11%) tRNA,transposase NA
DBSCAN-SWA_32 4003341 : 4068253 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage