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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018037 Bordetella pertussis strain J094 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 27 0

Results visualization

1. NZ_CP018037
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018037_1 644868-644977 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018037_2 2925767-2925883 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018037_3 3640642-3640735 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018037_4 3823141-3823225 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 78584 49 Synechococcus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_2 232663 : 307007 56 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489370 : 607265 101 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_4 611679 : 675512 50 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_5 694423 : 771732 59 Bacillus_phage(20.0%) transposase,tRNA,protease,integrase attL 741560:741578|attR 761448:761466
DBSCAN-SWA_6 1027068 : 1084731 54 Bacillus_virus(22.22%) transposase NA
DBSCAN-SWA_7 1089213 : 1151391 59 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_8 1154943 : 1221410 50 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_9 1343665 : 1380431 39 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_10 1469069 : 1519558 45 Salmonella_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_11 1563164 : 1629493 58 Streptococcus_virus(11.11%) transposase NA
DBSCAN-SWA_12 1665442 : 1721033 49 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_13 1742691 : 1834661 60 Brevibacillus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_14 1954845 : 2024497 56 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_15 2035993 : 2085389 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2096593 : 2137284 37 Klosneuvirus(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_17 2165067 : 2230616 59 Lake_Baikal_phage(20.0%) transposase,tRNA,protease NA
DBSCAN-SWA_18 2316793 : 2380371 50 uncultured_Caudovirales_phage(11.11%) transposase,protease NA
DBSCAN-SWA_19 2625833 : 2692333 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2874736 : 3025442 119 uncultured_Mediterranean_phage(16.67%) transposase,holin,tRNA NA
DBSCAN-SWA_21 3046393 : 3119935 59 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_22 3251418 : 3320421 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_23 3335867 : 3435979 110 uncultured_Caudovirales_phage(13.79%) tRNA,protease,transposase,tail,terminase NA
DBSCAN-SWA_24 3596646 : 3651620 45 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_25 3659431 : 3718899 58 Streptococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_26 3742482 : 3858150 103 Bacillus_phage(12.5%) transposase,tRNA,protease NA
DBSCAN-SWA_27 4002857 : 4067769 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage