Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018042 Bordetella pertussis strain J313 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 27 0

Results visualization

1. NZ_CP018042
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018042_1 250582-250666 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018042_2 432021-432114 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018042_3 997377-997471 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018042_4 1820755-1820882 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018042_5 3435492-3435601 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 79602 49 Synechococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_2 107425 : 175248 58 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 194400 : 266515 58 Prochlorococcus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_4 277131 : 331324 54 Pithovirus(14.29%) transposase,protease NA
DBSCAN-SWA_5 390845 : 448353 51 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590403 : 651592 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 656910 : 704155 52 uncultured_Caudovirales_phage(17.39%) tail,terminase,tRNA,transposase NA
DBSCAN-SWA_8 710321 : 780395 60 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_9 886837 : 954812 58 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 1037959 : 1087889 41 uncultured_Mediterranean_phage(37.5%) holin,tRNA,transposase NA
DBSCAN-SWA_11 1096957 : 1178233 59 Planktothrix_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_12 1217779 : 1299687 59 Bacillus_virus(28.57%) tRNA,transposase NA
DBSCAN-SWA_13 1419077 : 1471229 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1516911 : 1583238 58 Streptococcus_virus(11.11%) transposase NA
DBSCAN-SWA_15 1619186 : 1674776 49 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1834624 : 1892856 50 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_17 1903096 : 1947418 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_18 1977191 : 2041559 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2173085 : 2222738 45 Synechococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_20 2579560 : 2646059 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2674171 : 2711582 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_22 2841919 : 2907752 46 Pelagibacter_phage(16.67%) transposase,protease NA
DBSCAN-SWA_23 2913982 : 2973315 55 Burkholderia_phage(25.0%) transposase NA
DBSCAN-SWA_24 2983090 : 3035693 47 Ostreococcus_lucimarinus_virus(16.67%) transposase NA
DBSCAN-SWA_25 3404957 : 3450028 39 Staphylococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_26 3467772 : 3520177 47 Acinetobacter_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_27 3537294 : 3590046 45 Catovirus(11.11%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage