CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024891	Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence	0 crisprs	csa3	0	0	1	0
NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	2 crisprs	csa3,cas10,csm3gr7,cas1,cas2	0	12	3	1
NZ_CP024890	Rhodococcus ruber strain YYL chromosome, complete genome	6 crisprs	WYL,cas4,DEDDh,c2c9_V-U4,DinG,csa3,cas3,Cas9_archaeal	1	2	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4654 : 72523

uncultured_Caudovirales_phage(17.65%)

transposase,integrase,protease

attL 6041:6100|attR 62628:63484

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003939267.1\|4654_6040_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JGQ6	uncultured_Caudovirales_phage	6.8e-05	22.8
WP_003939268.1\|6039_6849_+	AAA family ATPase	R9U430	Rhizobium_phage	8.8e-05	21.8
6041:6100	attL	NA	NA	NA	NA
WP_190242429.1\|7133_7640_-	hypothetical protein	NA	NA	NA	NA
WP_102031149.1\|7656_8979_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	6.9e-07	25.8
WP_190242435.1\|9266_10298_-	hypothetical protein	NA	NA	NA	NA
WP_102032018.1\|10710_13164_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_145961974.1\|13160_14396_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_145961975.1\|14455_15205_-	hypothetical protein	NA	NA	NA	NA
WP_102032051.1\|15620_16721_+	hypothetical protein	NA	NA	NA	NA
WP_102032021.1\|17414_17867_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA
WP_102032022.1\|17878_19519_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_102032023.1\|19728_19917_+	hypothetical protein	NA	NA	NA	NA
WP_190242430.1\|20055_21357_-	hypothetical protein	NA	NA	NA	NA
WP_102032052.1\|21762_22560_-	ParA family protein	A0A240F4U1	Ochrobactrum_phage	7.8e-14	35.3
WP_190242431.1\|22623_22908_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_102032054.1\|22904_23783_-	replication initiation protein	NA	NA	NA	NA
WP_102032026.1\|24049_24439_-\|protease	Clp protease N-terminal domain-containing protein	NA	NA	NA	NA
WP_102032027.1\|25087_25630_+	dihydrofolate reductase family protein	NA	NA	NA	NA
WP_145961976.1\|25982_26252_-	hypothetical protein	NA	NA	NA	NA
WP_102032055.1\|26712_28176_-	adenylate/guanylate cyclase domain-containing protein	A0A1B1IWY2	uncultured_Mediterranean_phage	2.3e-11	30.6
WP_190242436.1\|28319_28820_-	PaaI family thioesterase	NA	NA	NA	NA
WP_102032029.1\|28884_30462_-	MFS transporter	NA	NA	NA	NA
WP_102032056.1\|30584_31250_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005245467.1\|31608_32424_-	ATP-binding protein	NA	NA	NA	NA
WP_102032030.1\|32420_34076_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_102032016.1\|34672_34906_-	hypothetical protein	NA	NA	NA	NA
WP_102032017.1\|34902_35490_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.2e-34	45.5
WP_003939264.1\|35733_36330_-	cadmium resistance transporter	NA	NA	NA	NA
WP_185113669.1\|36326_36656_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_003939266.1\|36883_37486_+	recombinase family protein	A0A219YB42	Aeromonas_phage	2.1e-35	47.3
WP_003939267.1\|37487_38873_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JGQ6	uncultured_Caudovirales_phage	6.8e-05	22.8
WP_003939268.1\|38872_39682_+	AAA family ATPase	R9U430	Rhizobium_phage	8.8e-05	21.8
WP_190242432.1\|39966_40491_-	hypothetical protein	NA	NA	NA	NA
WP_190242433.1\|45866_46541_-	hypothetical protein	NA	NA	NA	NA
WP_102032032.1\|48054_49155_-	hypothetical protein	NA	NA	NA	NA
WP_102032033.1\|49168_49411_-	hypothetical protein	NA	NA	NA	NA
WP_145961978.1\|49615_49858_-	hypothetical protein	NA	NA	NA	NA
WP_102031818.1\|52632_54174_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_102031817.1\|54220_54985_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-25	29.8
WP_190242434.1\|57210_57789_+	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A248SJV3	Salicola_phage	9.7e-14	34.2
WP_102032037.1\|57817_58303_+	hypothetical protein	NA	NA	NA	NA
WP_145961980.1\|58388_59513_+	hypothetical protein	NA	NA	NA	NA
WP_003939264.1\|59487_60084_-	cadmium resistance transporter	NA	NA	NA	NA
WP_185113669.1\|60080_60410_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_003939266.1\|60637_61240_+	recombinase family protein	A0A219YB42	Aeromonas_phage	2.1e-35	47.3
WP_003939267.1\|61241_62627_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JGQ6	uncultured_Caudovirales_phage	6.8e-05	22.8
WP_003939268.1\|62626_63436_+	AAA family ATPase	R9U430	Rhizobium_phage	8.8e-05	21.8
WP_102032039.1\|63619_64186_-	hypothetical protein	NA	NA	NA	NA
62628:63484	attR	NA	NA	NA	NA
WP_102032040.1\|64182_65964_-	DEAD/DEAH box helicase	Q2NP48	Hyphantria_cunea_nuclear_polyhedrosis_virus	1.1e-44	30.6
WP_102032041.1\|65960_66416_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_102032042.1\|66472_67906_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.2e-26	33.9
WP_102032043.1\|67999_68617_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_102032058.1\|68670_69426_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.5e-14	29.6
WP_102032044.1\|69529_72523_-\|transposase	Tn3 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024892

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024892_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024892_1

198090-198405

TypeIII

Consensus_repeat	Method
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGAC	CRT
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACC	PILER-CR

4 spacers

csm3gr7,cas1,cas2

The CRISPR arrays of NZ_CP024892_1

>merge|NZ_CP024892|1|198090-198405|CRT,PILER-CR
TTCTTCGTGCCCGTAGGCGAATGGAGCACTGTCGACGGTGACGCGATCTATACCCCGCAGGATGTCGTGTTTCTGGGCCCGTAGGCGAATGGAGCACTGTCGACGTATCCGGTGTGCAAGGACAGACCCGCGAACGAGTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACCTCGGTCGAATGTGAGAACCTCACGTTCGGCAAGGTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACCTGGAGTCATCCGCCGATAAAGGCGCAGGCTACATCGTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACC

>NZ_CP024892|1|1|198090-198404|CRT
TTCTTCGTGCCCGTAGGCGAATGGAGCACTGTCGAC	GGTGACGCGATCTATACCCCGCAGGATGTCGT
GTTTCTGGGCCCGTAGGCGAATGGAGCACTGTCGAC	GTATCCGGTGTGCAAGGACAGACCCGCGAACGA
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGAC	CTCGGTCGAATGTGAGAACCTCACGTTCGGCAAG
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGAC	CTGGAGTCATCCGCCGATAAAGGCGCAGGCTACATC
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGAC

>NZ_CP024892|1|1|198158-198405|PILER-CR
GTTTCTGGGCCCGTAGGCGAATGGAGCACTGTCGACG	TATCCGGTGTGCAAGGACAGACCCGCGAACGA
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACC	TCGGTCGAATGTGAGAACCTCACGTTCGGCAAG
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACC	TGGAGTCATCCGCCGATAAAGGCGCAGGCTACATC
GTTTCTGTGCCCGTAGGCGAATGGAGCACTGTCGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024892.1\|WP_102032159.1\|205155_205884_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153238
NZ_CP024892.1\|WP_102032144.1\|184126_184798_+\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NZ_CP024892.1\|WP_190242444.1\|195731_197672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_145962004.1\|202025_202211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032149.1\|190972_191425_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_145962000.1\|191450_192179_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274009
NZ_CP024892.1\|WP_102032160.1\|206406_206652_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_145962003.1\|199094_200648_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NZ_CP024892.1\|WP_102032145.1\|184801_186535_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032155.1\|200665_200959_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP024892.1\|WP_145962002.1\|198734_199055_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275209
NZ_CP024892.1\|WP_102032148.1\|188794_190924_+\|hypothetical-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_CP024892.1\|WP_102032157.1\|202470_202767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032146.1\|186531_188073_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187857
NZ_CP024892.1\|WP_174824807.1\|201140_201958_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP024892.1\|WP_102032151.1\|192242_194333_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274263
NZ_CP024892.1\|WP_102032152.1\|194396_195533_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032158.1\|204819_205068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032156.1\|202207_202474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032147.1\|188069_188798_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024892.1\|WP_145962002.1\|198734_199055_+\|hypothetical-protein	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.58495e-13
NZ_CP024892.1\|WP_102032144.1\|184126_184798_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	0.0023981
NZ_CP024892.1\|WP_102032148.1\|188794_190924_+\|hypothetical-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	7.71615e-32
NZ_CP024892.1\|WP_102032159.1\|205155_205884_-\|hypothetical-protein	gnl\|CDD\|153238	cd03144, GATase1_ScBLP_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.	5.11422e-12
NZ_CP024892.1\|WP_174824807.1\|201140_201958_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.59615e-25
NZ_CP024892.1\|WP_102032151.1\|192242_194333_-\|hypothetical-protein	gnl\|CDD\|274263	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family. Members of this family are found, exclusively in the vicinity of CRISPR repeats and other CRISPR-associated (cas) genes, in Methanothermobacter thermautotrophicus (Archaea), Thermus thermophilus (Deinococcus-Thermus), Chloroflexus aurantiacus (Chloroflexi), and Thermomicrobium roseum (Thermomicrobia).	0.00331774
NZ_CP024892.1\|WP_145962000.1\|191450_192179_-\|hypothetical-protein	gnl\|CDD\|274009	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00643704
NZ_CP024892.1\|WP_145962003.1\|199094_200648_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	9.3373e-95
NZ_CP024892.1\|WP_102032146.1\|186531_188073_+\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	8.86356e-05
NZ_CP024892.1\|WP_102032155.1\|200665_200959_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.39994e-15

>NZ_CP024892.1|WP_190242444.1|195731_197672_-|hypothetical-protein
MDIVVCGAGLDFAETYQRLWDGLSDLGVTASFLLDYTGGTAAMVAVAVAIHQRIHLAAGGDRPDLRFYQDESAGVLVCDLGFRFTLDVALTVAEMARVHGFGINTVRRSPSPAVSWGADPLWRRAFLDRSDQYEKVAASTVELRQALEPLFETYADTGCERRSDSSSVWVDDKSGRTRAGKSMELAVLAVVLGEAWDEVVFSCEVQYPEKSSAAAVTEFDVVVRRGHQVVVLEVKSSLHHVAESAGKRLAAARTVFGGATRVLSVSPQAKRDVDPDDVGGLEDLGGQWEPALAALGRWRRHVLTSARDQAVEDLAQVGAAAAEFLPPPSAARGFSWPPAPPSAVLGDPIPEPSGARSEIIPDEVRARALVAAVGGSPLAVDNALAVTTAATTLLGTRDVIRAYRPHLASRGGAEPVVHRIDGLDARSIGSECGRLAPATLAITPSTKAATAGMTAAAGQAGHDLLHVDIAGGWAVSWRHGRWPHRHRVRWESVSNPQYDTDVDETWWTRLEQAGHTNVVALQALLRKIDLPDGAEVRFSPMPEVPWLVPILVTGSWRALGVAVPADVGKADRSTVLACDQHVASAVGDVGRLLVALPLHAKQDPAKVRTRWSTLLRRAPGPLFAFWRSQLPDMILFEKGEVHRWLG
>NZ_CP024892.1|WP_102032152.1|194396_195533_-|hypothetical-protein
MFHNIDVCVVSVDPEVLFTWCEQLGGDMYYDAEEAAEYRDRAYRLCLFGCPCSKHSALELPPHGEGFVAGPAARRRMTAALCSAVVDGVVVWDDAVRRRVCTVVRDALGDTPRLRAEGTSFTARPERILEAMGLQVGVIEVMRKLILGATGWRHSVPLAFFTGRCDTAAAAVYVADSVRASRRPSAAGASFLEAVSVRQIAEFVREGRAAIIAREPDRWAQLLTECAGWSARPLGSLTDGDDGGDDRQVLLRVDGEAGFVDPAEAVTGPQVPMLHERVEFEQDGYLAAAIEYLVDAAARNVDPVVSWLRGDADAAPPGDLVRWFDAARHGRRRKPAHRALRSVPVEHLPTVLEHSRDYLRASQPAYWEMLLRRARRCR
>NZ_CP024892.1|WP_102032151.1|192242_194333_-|hypothetical-protein
MTVMMCTVGMNPAPVALAVLTCEPAPTRVLLVCSSGSRPVAAQLSVVMGALLPGTEFTLVPVGAGVSWRSCHRVLTEHAPAPPYRLDYTGGTTSMSMAAVTVHLERHDRVRDGGAALRSYVDEQSGVQVTDAGIATRLRTESVSIAVLAELHAAALAPTIVLAARDFPAVGDRVRLEALIEATRRAFEAHRITDEWLTAFGEVGMADVVEPILPTPEVSDSDRDGRFVELISLAAAVGCGQWDEIVFDGKEHRSQFDVLVRRGHRLVCIESKHRRIGDTRDDLGHRMSTTLSTFGGAARVHLHLLPRSQKDQDAATAFDAEIRSWKKTIPDLQRLQVIHTRTPAAPQAHLAPDASPPDPVTAMIGHLRRDLPAASAADGRGRLATPDSRDSPGTRTQPPLLNRGTVMTAVGGSEVLTALVADNEPVRTVVLVGPPSLLKPLAKGVLEGTSAAMIDIGDLSARSVWLAARNRRPETVIPTVSKKSAGAGLLRYAHECGAAIEHLLPRGSRELGSGAVVPMTTPPRWPALLTTEAGYRRHPRGTQAWPGQTHSLFDLPTLRTVVDHWARTDGVTVYISGDLRSRLVAPVVITHGFLAFAVTSYLVGDKPKWALARSFTAAQATVLEARFGPAIRTWVAMSEQVHRLSLLRDQVPEWTRLWQRLQMLSGVDEEHLQAPPWTIPELHRTIGTFLGIDTVE
>NZ_CP024892.1|WP_145962000.1|191450_192179_-|hypothetical-protein
MFVFTRRRTDSSGTESGGEPTPRVDDARLGLDRVSGIGVVSVPNRWDRIRAVVAGHGDGRHGLLPDPECGHTQHTARIADEFGSTVDSEQLELTRRLSRIDELTERLTTEAAQLRVMVEALDGQVLGLREADERVEPSLDTRRRERDLMRRQAERQERVDKLDSRIRQIERDLAGVARMRSYQISACAQRIDRARVTRQQLIDVYWRWFVRTHPEESAVRAGYPIPSVDRPAVTAVVTPPRH
>NZ_CP024892.1|WP_102032149.1|190972_191425_-|hypothetical-protein
MSLFTLRRQTDRKRAVRRIEIAMSAALPNTGVPTSTELCTAVEQRIEAYLAQGSIDDGCGHVLDTWLRTREGDAQAALQELIDQQRQVDDVLVDQARARADRAEQRYSRYRARADRYLAAAQDCRHRALGATAGTVVAAPEPVPAPDRAG
>NZ_CP024892.1|WP_102032148.1|188794_190924_+|hypothetical-protein
MTAPYTFVDFRTPLPGSAFGDDTDAVFDRPVPGRHSGRIDLTITTLSPLFIGSADDSGGQPVLIAGVPAIPGSALKGMLRAYLAAMSGSSLGPQTDTVIWYRNPVADSRSPTLQAALQKYRVARGATAEPGSQRVGLLVRDPVHGHAVRECPQLRVPLPGRSTSFYSLVPRVTWRILSRDLAVRRHLTDPGLSARNDRRVFVVWAAVETTSDKGHGARSVRKVVFAVGGTAHDARRHAHARRDSGRTGESVPTTCRDTEFVSFLDDEGLYQYDADPDEPIAVEMILHATGLTAPDEPDPATDEQRNAYLFPIPDTVTAGWIADSGDGAHKKVTRVPVANSDVVTALTDDVQGQATDYHKQLPTVETLLAGDGVPVFFDTEITDGTEAVGRLGRGGGFRIRARKSFLDTIDARFREAGFDAGAPDLVQSLFGDSADDRAKKGRVSVGIAIAAPGAQLLSRQPDVVLLGPKIQAWYRYLHQLSSPHTDDPRTYDHADAAFRGRKMYLHRWHRNGQKDEQAWKALADRHRNRGNAGNRVGRTITPVAPRARFTGSIRFTNLTAAELGALIVVVTLGNDPRRNHGPNDNPHYAHLLGGGRALGLGSVHLASTVYLDHPGRYDTDTWDAPGHKADGDDLAGFVEEFRAKLHLAEPDQHQWAAGPDGRRWLRSIAEVFLVAQWHNRLPAAKTADMSLDDHRLRKIPQPLIDLFGS
>NZ_CP024892.1|WP_102032147.1|188069_188798_+|hypothetical-protein
MNPSDTDGGPVIDGLRLDPLPTDTQSALLASLSGTGDRSWPAPGAAPVWWARIDQPNGYLVGRFQDGAWTLAGPDGHRVHGVDGPWDQIRVFQPGEEILLAHRTGRVRGVRRLRTPSPQSATSPHHRFLLVERSGAAAAPGAVFPVNRDAVTGLTAVIPEPRSGTSPLTMVVREHFTADPHSGAVRVAAVCWDRYSGGVSDPLLTEHAASLVPAAHGTAGTEQAPDSTRAPRRRWSLFGRKR
>NZ_CP024892.1|WP_102032146.1|186531_188073_+|hypothetical-protein
MTVEQLRRQLAGAGGVPAVRTAVRIRGHVHVLSDTTIGGDESDQGADTRLDRDTVTGRPKWAGTGQAGALRHHLAAVLGDEYAARVFGDASADSPFRSTESLAYGPDGGYPPIDVRRGNHIDAATGVGVRGAVFTDEVLTAGAVFPVDWSVHAGADHLVEATAGFVRAVDGIRDESICLGLRRGKGRGAISATGWTVERHDLGTPGGFRSWHTRDRVPGWVAPEASTDLVAELDALIPGVAERVRQLRAIDLRKRLMIRMTLAVAELVHPGHDKPRVSRAATMVQSGTGRDHREDGALARAPLTRPTGTGGALSPVDSGTALHSMLKRHTGWVLHAIANSADDPGHAHHRADEILEALFGTIIRAGRRPATLRPSRVSVTESAVAGSSTVRLPHVRLNPLTQGAVDSALFFEDVLVGGHSEITVTVTRPRLHELGALAWVLRDLRDGVVSPMGAATTNGHGRRLLTAAALDVPAGVWGSEPHRFATLGDYAKSKGLRQAAAEALKQAVQKGHP
>NZ_CP024892.1|WP_102032145.1|184801_186535_+|hypothetical-protein
MSVTFVVVTVVLRDRALITDGPAVSPHTLDHLPGSAVRGMLASVCRPDEIELLIADGAVESAPGLPVLSMRATHDAAEMIAAVAYPAPRTTVGIEDDWGGAELADARTIDTGPTTRLSPVAGLMVSSPDPEVAARPAAPSTSTHQRLHRGDTAPGPFTETVLEPGAGFEIRLRIADHVADPEPIVAALREVLTRPGLRIGSGADGAYGGKLTVLSIATAVDRPWSRPSPATAAGQPVHLVLVTPALVRNPHTGECDPAALARDVEETLSAAASSAVGAQIRVTVTEPAPSVGSVRVGGFHRGYRGLRPEHWAATAGSVVTVTLDTPLPGQVWDRILSHRIGERTVDGFGLLRIDPHPADWVEEAAPLHHTTGPGARLADGSEAPAVDHADPAVRLFRHTLFRHGADTAVPELAIRLARKTVRIPRHSTLSRIRVLVPSLSWDRDGAAGDLAAVHTLLTSYRREEGASDDTRPAADALTKCRIRWDTETTWSLFEFLHQLTAPDPDPALSILRRTRDPLDPYGEAMLPDLLAEHSLVTAHRAAREGDAASWIDDHHVSLRHALVATLIHALSTGKEQA
>NZ_CP024892.1|WP_102032144.1|184126_184798_+|hypothetical-protein
MTGATVPPTELRIELLAPTVLGVASSDPLDVDLEVTTDPFGLPYLQRHRLSARLRDAALAASLAYPDILVPALDLLGAARGLGAGRRLQIGHARLPIAVQAAAAHAVHSEHASTGHEEIPRPLISRIRDAYTETLTSTALDDDAAPVTGTRRQVRAVRKGTVLSAPLLFTEEPPSPDHVWALALMCTAVEQIGSGAARGLGQVCCSLDGDRDRTHDLAFRTGA
>NZ_CP024892.1|WP_145962002.1|198734_199055_+|hypothetical-protein
MLNEAAAQQNVLDAWHLTKSRLAWEPVPNVEVSAFAADLLAHLGAISSSLQERSWTPAPLRHVEVAKRSGGTRTLGVPTLTDRVTERALAAVITRAVDGRRCPARA
>NZ_CP024892.1|WP_145962003.1|199094_200648_+|CRISPR-associated-endonuclease-Cas1
MDGRLQSGSYGFRPGLGVDDAIDDLQQRIAAGQRWVVRTDIADCFGSVTRRGCMRALAEFVDDPELVELVGRRVDPRAAGAGAVGIPQGSPLSPVLLNIYLDGLDQDLWSHGIETIRYVDDLAIACDTREDALASLECVRAVLAHRSLQLHESKTTVVEADHGVTFLGRTVTGGELRPERELCRSPRITLHITSRGSALRARGTKFVITQNAATTVHPAPRTRMIVCHDRTLVSTAALTLAARHNVEVAIVDRHAGLAGFLSPAGTRYDTAHSQRTAQGDPEFVLHLARCVVEGKIANCLALLRRTPTRRRRVPADIHARLQHLRARCRETGTAPALLGVEGSAARLYYQALQMLIPQEYGFTGRRKRPPTDPVNAMLSYSYTVLLGEVTRAVQIAGLDPTQGFLHRPHRGRPSLALDLMEEFRPLIVDTTVLRSVATGAVRPSGFTTSDRDGCRMDGATKRVLVTELERRLLTVVTHPYLRRKVSYRECIELQARQVASLVASPETGSPYLPMSWR
>NZ_CP024892.1|WP_102032155.1|200665_200959_+|CRISPR-associated-endonuclease-Cas2
MEAAVMPFALAMYDIASDRRRTRVADVLADSGPRVQLSVFELALTHPRGLSILCDKLTRIIDPRDDQIRIYTLPTMDAGRIVLGNRVLQERLPYLIL
>NZ_CP024892.1|WP_174824807.1|201140_201958_-|IS5-family-transposase
MHGVVDALSTRLVPDALWEIVEPLLPRFSPRPQGGGRAALDDRAVFTAVVYVLTSGCAWRHLPPSFGVSVPTAHRRFAAWAKAGVFDELHRQILDRLGAGGDLDWSAAILDAAHVRAKKGGSLTGPSPVDRGKNGSKIHILTDADGIPLVTAVTSANTHDSVMLQPMVAAIPAVRSRRGPRRRRPGRLRADKGYDYPVHRRWLRQRGIVPRIARRGVDSSERLGRYRWKIERTLAWLSGYRRLTMRYERHGEHFAAFLQLAAALTCFKKLAK
>NZ_CP024892.1|WP_145962004.1|202025_202211_+|hypothetical-protein
MGRTLLVSSWRSRIWLLGLVVVLLAFGGSVFGPVTMQTLGLGLVLVVTIVVLRLLVGGGRR
>NZ_CP024892.1|WP_102032156.1|202207_202474_+|hypothetical-protein
MNRRTVTLAGVAIAAAATTIGVTTRFAPPEITDNTPATVHSVENLTEDLSDSQERAQNRMRDAGIDQGHAENAERRKVVLPHPPRFPR
>NZ_CP024892.1|WP_102032157.1|202470_202767_+|hypothetical-protein
MSGTGRRPSAVRSYLVAARIGVGIAFVAPILWFVARYWWAYRTTDGIPTVLAQGMIAGIAATIEYALTNPAESLLYSIGMYLLWIFAVGRNHHHRKCR
>NZ_CP024892.1|WP_102032158.1|204819_205068_+|hypothetical-protein
MSLASSSATSTTGHVGDEARLLGLDAARGVALLGMMAVHALLLVDDDGNPTTAFTLAAGRSAALFAVPTARPSATSSRSPPP
>NZ_CP024892.1|WP_102032159.1|205155_205884_-|hypothetical-protein
MAGVGALALSGAAATWMGRDERAVALVYRGPASVPGCPEAVAALIDTGPIALRAVFCGPQEKVPLSSGTLAEAAVFAQPGGGTLREGWEHMRPYARAIREFTAPGGRYLGFCLGGYLAGATPGFALLPGDTARYIDTAGAAVRTPGETVVPVRWRNQRRHLFFQDGPVFRLGEDGVTVLARYDNGEIAAAVAGYGAGTVGVVGPHPEADRSWYRDGVVNPDGIRFDLGHDLIAAVMAGQSSG
>NZ_CP024892.1|WP_102032160.1|206406_206652_+|hypothetical-protein
MFENTPRPRPEPGLVGVGARVLVRRPSDSAQTGRIVEDYAELTDTGERGHDWAPVHRWAVALDDGRLVFADTDDLTPTPGK

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Crispr_ID: NZ_CP024892_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024892_2

202838-203216

TypeIII-A

Consensus_repeat	Method
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CRISPRCasFinder
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	PILER-CR
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CRT

5 spacers

cas2,cas1

The CRISPR arrays of NZ_CP024892_2

>merge|NZ_CP024892|2|202838-203216|CRISPRCasFinder,PILER-CR,CRT
GGATCTGCACTCGAAGGCCGGCGGAGCACTGTCGATACTGGACAAACGTTCAGTCCACCACACCCAAGTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGACTTTGGGCCTCGCTGGAATCAAGCTGGAGTGGCGTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGACCATATGGATCCGGCGGGCATCCGAGAGGCTATGTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGACCTGTGTGGGGTGAGGTCGCAGACCTGTACCCGTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGACATGGGTCACGAGCAATCAGGACTCATCAGCGTGGCAGGTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC

>NZ_CP024892|2|1|202838-203216|CRISPRCasFinder
GGATCTGCACTCGAAGGCCGGCGGAGCACTGTCGAT	ACTGGACAAACGTTCAGTCCACCACACCCAA
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	TTTGGGCCTCGCTGGAATCAAGCTGGAGTGGC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CATATGGATCCGGCGGGCATCCGAGAGGCTAT
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CTGTGTGGGGTGAGGTCGCAGACCTGTACCC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	ATGGGTCACGAGCAATCAGGACTCATCAGCGTGGCAG
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC

>NZ_CP024892|2|2|202905-203216|PILER-CR
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	TTTGGGCCTCGCTGGAATCAAGCTGGAGTGGC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CATATGGATCCGGCGGGCATCCGAGAGGCTAT
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CTGTGTGGGGTGAGGTCGCAGACCTGTACCC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	ATGGGTCACGAGCAATCAGGACTCATCAGCGTGGCAG
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC

>NZ_CP024892|2|2|202905-203216|CRT
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	TTTGGGCCTCGCTGGAATCAAGCTGGAGTGGC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CATATGGATCCGGCGGGCATCCGAGAGGCTAT
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	CTGTGTGGGGTGAGGTCGCAGACCTGTACCC
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC	ATGGGTCACGAGCAATCAGGACTCATCAGCGTGGCAG
GTTTCTGTGCCCGTAGGCAGGTAGAGCGCTGTCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024892.1\|WP_102032159.1\|205155_205884_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153238
NZ_CP024892.1\|WP_145962002.1\|198734_199055_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275209
NZ_CP024892.1\|WP_102032161.1\|206818_207064_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_190242444.1\|195731_197672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_145962006.1\|210103_210706_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_CP024892.1\|WP_145962004.1\|202025_202211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032157.1\|202470_202767_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032160.1\|206406_206652_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_145962003.1\|199094_200648_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NZ_CP024892.1\|WP_102032162.1\|207799_208660_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP024892.1\|WP_102032166.1\|212609_213755_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271186
NZ_CP024892.1\|WP_102032158.1\|204819_205068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_174824807.1\|201140_201958_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP024892.1\|WP_102032151.1\|192242_194333_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274263
NZ_CP024892.1\|WP_102032152.1\|194396_195533_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032156.1\|202207_202474_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032165.1\|210777_212613_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP024892.1\|WP_145962005.1\|209898_210120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024892.1\|WP_102032155.1\|200665_200959_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP024892.1\|WP_102032189.1\|207208_207400_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024892.1\|WP_145962003.1\|199094_200648_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	9.3373e-95
NZ_CP024892.1\|WP_145962002.1\|198734_199055_+\|hypothetical-protein	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.58495e-13
NZ_CP024892.1\|WP_102032159.1\|205155_205884_-\|hypothetical-protein	gnl\|CDD\|153238	cd03144, GATase1_ScBLP_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.	5.11422e-12
NZ_CP024892.1\|WP_145962006.1\|210103_210706_-\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	1.02376e-06
NZ_CP024892.1\|WP_174824807.1\|201140_201958_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.59615e-25
NZ_CP024892.1\|WP_102032151.1\|192242_194333_-\|hypothetical-protein	gnl\|CDD\|274263	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family. Members of this family are found, exclusively in the vicinity of CRISPR repeats and other CRISPR-associated (cas) genes, in Methanothermobacter thermautotrophicus (Archaea), Thermus thermophilus (Deinococcus-Thermus), Chloroflexus aurantiacus (Chloroflexi), and Thermomicrobium roseum (Thermomicrobia).	0.00331774
NZ_CP024892.1\|WP_102032162.1\|207799_208660_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	1.37616e-11
NZ_CP024892.1\|WP_102032166.1\|212609_213755_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271186	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain. This family includes putative Transposase A from transposon Tn554. It belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	2.2451e-25
NZ_CP024892.1\|WP_102032155.1\|200665_200959_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.39994e-15
NZ_CP024892.1\|WP_102032165.1\|210777_212613_-\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.26786e-10

>NZ_CP024892.1|WP_102032157.1|202470_202767_+|hypothetical-protein
MSGTGRRPSAVRSYLVAARIGVGIAFVAPILWFVARYWWAYRTTDGIPTVLAQGMIAGIAATIEYALTNPAESLLYSIGMYLLWIFAVGRNHHHRKCR
>NZ_CP024892.1|WP_102032156.1|202207_202474_+|hypothetical-protein
MNRRTVTLAGVAIAAAATTIGVTTRFAPPEITDNTPATVHSVENLTEDLSDSQERAQNRMRDAGIDQGHAENAERRKVVLPHPPRFPR
>NZ_CP024892.1|WP_145962004.1|202025_202211_+|hypothetical-protein
MGRTLLVSSWRSRIWLLGLVVVLLAFGGSVFGPVTMQTLGLGLVLVVTIVVLRLLVGGGRR
>NZ_CP024892.1|WP_174824807.1|201140_201958_-|IS5-family-transposase
MHGVVDALSTRLVPDALWEIVEPLLPRFSPRPQGGGRAALDDRAVFTAVVYVLTSGCAWRHLPPSFGVSVPTAHRRFAAWAKAGVFDELHRQILDRLGAGGDLDWSAAILDAAHVRAKKGGSLTGPSPVDRGKNGSKIHILTDADGIPLVTAVTSANTHDSVMLQPMVAAIPAVRSRRGPRRRRPGRLRADKGYDYPVHRRWLRQRGIVPRIARRGVDSSERLGRYRWKIERTLAWLSGYRRLTMRYERHGEHFAAFLQLAAALTCFKKLAK
>NZ_CP024892.1|WP_102032155.1|200665_200959_+|CRISPR-associated-endonuclease-Cas2
MEAAVMPFALAMYDIASDRRRTRVADVLADSGPRVQLSVFELALTHPRGLSILCDKLTRIIDPRDDQIRIYTLPTMDAGRIVLGNRVLQERLPYLIL
>NZ_CP024892.1|WP_145962003.1|199094_200648_+|CRISPR-associated-endonuclease-Cas1
MDGRLQSGSYGFRPGLGVDDAIDDLQQRIAAGQRWVVRTDIADCFGSVTRRGCMRALAEFVDDPELVELVGRRVDPRAAGAGAVGIPQGSPLSPVLLNIYLDGLDQDLWSHGIETIRYVDDLAIACDTREDALASLECVRAVLAHRSLQLHESKTTVVEADHGVTFLGRTVTGGELRPERELCRSPRITLHITSRGSALRARGTKFVITQNAATTVHPAPRTRMIVCHDRTLVSTAALTLAARHNVEVAIVDRHAGLAGFLSPAGTRYDTAHSQRTAQGDPEFVLHLARCVVEGKIANCLALLRRTPTRRRRVPADIHARLQHLRARCRETGTAPALLGVEGSAARLYYQALQMLIPQEYGFTGRRKRPPTDPVNAMLSYSYTVLLGEVTRAVQIAGLDPTQGFLHRPHRGRPSLALDLMEEFRPLIVDTTVLRSVATGAVRPSGFTTSDRDGCRMDGATKRVLVTELERRLLTVVTHPYLRRKVSYRECIELQARQVASLVASPETGSPYLPMSWR
>NZ_CP024892.1|WP_145962002.1|198734_199055_+|hypothetical-protein
MLNEAAAQQNVLDAWHLTKSRLAWEPVPNVEVSAFAADLLAHLGAISSSLQERSWTPAPLRHVEVAKRSGGTRTLGVPTLTDRVTERALAAVITRAVDGRRCPARA
>NZ_CP024892.1|WP_190242444.1|195731_197672_-|hypothetical-protein
MDIVVCGAGLDFAETYQRLWDGLSDLGVTASFLLDYTGGTAAMVAVAVAIHQRIHLAAGGDRPDLRFYQDESAGVLVCDLGFRFTLDVALTVAEMARVHGFGINTVRRSPSPAVSWGADPLWRRAFLDRSDQYEKVAASTVELRQALEPLFETYADTGCERRSDSSSVWVDDKSGRTRAGKSMELAVLAVVLGEAWDEVVFSCEVQYPEKSSAAAVTEFDVVVRRGHQVVVLEVKSSLHHVAESAGKRLAAARTVFGGATRVLSVSPQAKRDVDPDDVGGLEDLGGQWEPALAALGRWRRHVLTSARDQAVEDLAQVGAAAAEFLPPPSAARGFSWPPAPPSAVLGDPIPEPSGARSEIIPDEVRARALVAAVGGSPLAVDNALAVTTAATTLLGTRDVIRAYRPHLASRGGAEPVVHRIDGLDARSIGSECGRLAPATLAITPSTKAATAGMTAAAGQAGHDLLHVDIAGGWAVSWRHGRWPHRHRVRWESVSNPQYDTDVDETWWTRLEQAGHTNVVALQALLRKIDLPDGAEVRFSPMPEVPWLVPILVTGSWRALGVAVPADVGKADRSTVLACDQHVASAVGDVGRLLVALPLHAKQDPAKVRTRWSTLLRRAPGPLFAFWRSQLPDMILFEKGEVHRWLG
>NZ_CP024892.1|WP_102032152.1|194396_195533_-|hypothetical-protein
MFHNIDVCVVSVDPEVLFTWCEQLGGDMYYDAEEAAEYRDRAYRLCLFGCPCSKHSALELPPHGEGFVAGPAARRRMTAALCSAVVDGVVVWDDAVRRRVCTVVRDALGDTPRLRAEGTSFTARPERILEAMGLQVGVIEVMRKLILGATGWRHSVPLAFFTGRCDTAAAAVYVADSVRASRRPSAAGASFLEAVSVRQIAEFVREGRAAIIAREPDRWAQLLTECAGWSARPLGSLTDGDDGGDDRQVLLRVDGEAGFVDPAEAVTGPQVPMLHERVEFEQDGYLAAAIEYLVDAAARNVDPVVSWLRGDADAAPPGDLVRWFDAARHGRRRKPAHRALRSVPVEHLPTVLEHSRDYLRASQPAYWEMLLRRARRCR
>NZ_CP024892.1|WP_102032151.1|192242_194333_-|hypothetical-protein
MTVMMCTVGMNPAPVALAVLTCEPAPTRVLLVCSSGSRPVAAQLSVVMGALLPGTEFTLVPVGAGVSWRSCHRVLTEHAPAPPYRLDYTGGTTSMSMAAVTVHLERHDRVRDGGAALRSYVDEQSGVQVTDAGIATRLRTESVSIAVLAELHAAALAPTIVLAARDFPAVGDRVRLEALIEATRRAFEAHRITDEWLTAFGEVGMADVVEPILPTPEVSDSDRDGRFVELISLAAAVGCGQWDEIVFDGKEHRSQFDVLVRRGHRLVCIESKHRRIGDTRDDLGHRMSTTLSTFGGAARVHLHLLPRSQKDQDAATAFDAEIRSWKKTIPDLQRLQVIHTRTPAAPQAHLAPDASPPDPVTAMIGHLRRDLPAASAADGRGRLATPDSRDSPGTRTQPPLLNRGTVMTAVGGSEVLTALVADNEPVRTVVLVGPPSLLKPLAKGVLEGTSAAMIDIGDLSARSVWLAARNRRPETVIPTVSKKSAGAGLLRYAHECGAAIEHLLPRGSRELGSGAVVPMTTPPRWPALLTTEAGYRRHPRGTQAWPGQTHSLFDLPTLRTVVDHWARTDGVTVYISGDLRSRLVAPVVITHGFLAFAVTSYLVGDKPKWALARSFTAAQATVLEARFGPAIRTWVAMSEQVHRLSLLRDQVPEWTRLWQRLQMLSGVDEEHLQAPPWTIPELHRTIGTFLGIDTVE
>NZ_CP024892.1|WP_102032158.1|204819_205068_+|hypothetical-protein
MSLASSSATSTTGHVGDEARLLGLDAARGVALLGMMAVHALLLVDDDGNPTTAFTLAAGRSAALFAVPTARPSATSSRSPPP
>NZ_CP024892.1|WP_102032159.1|205155_205884_-|hypothetical-protein
MAGVGALALSGAAATWMGRDERAVALVYRGPASVPGCPEAVAALIDTGPIALRAVFCGPQEKVPLSSGTLAEAAVFAQPGGGTLREGWEHMRPYARAIREFTAPGGRYLGFCLGGYLAGATPGFALLPGDTARYIDTAGAAVRTPGETVVPVRWRNQRRHLFFQDGPVFRLGEDGVTVLARYDNGEIAAAVAGYGAGTVGVVGPHPEADRSWYRDGVVNPDGIRFDLGHDLIAAVMAGQSSG
>NZ_CP024892.1|WP_102032160.1|206406_206652_+|hypothetical-protein
MFENTPRPRPEPGLVGVGARVLVRRPSDSAQTGRIVEDYAELTDTGERGHDWAPVHRWAVALDDGRLVFADTDDLTPTPGK
>NZ_CP024892.1|WP_102032161.1|206818_207064_-|hypothetical-protein
MRGPLDDVASGRFADEARGVELLRDFDRRIVVEAMPEIAGRWAHRAGPGRKSPSAGHVRVARGMRELCHSFHERLDDCAGA
>NZ_CP024892.1|WP_102032189.1|207208_207400_-|hypothetical-protein
MSMREVRLPVARWRALPDSEKVYRRRAAGVDHVIHSMAMDGEPVSDRWIDDARQRRQDALGRR
>NZ_CP024892.1|WP_102032162.1|207799_208660_-|hypothetical-protein
MTEGSRGGRRREYASDADRVRAWRQRQKEAARAERLAAATPTDPAAAVTTLAQAVPLLRQEAQAALERLSEVAASITAATALLADPAALEAHLRRVQADADKVRADAGAEIARLREQLDAALDERADADAAAAAALAQADAAATALAAARREHQSELDRLRADHAAALEAWTARVEESEAAHRRRTADLEALVEQQRDELARLRATAEQATATVGRLESDLAAARAETAAERERTEAVRADLAAARVETAAARAQVDAARDRADELRTELRDLRAASTPPGPAAPR
>NZ_CP024892.1|WP_145962005.1|209898_210120_-|hypothetical-protein
MTSAADEPGSHRVNDDEPADSDGDRITEVEELFADLDGVLPAEMTPLFYEHSYWELMLAVRDLLDILHRGAGK
>NZ_CP024892.1|WP_145962006.1|210103_210706_-|hypothetical-protein
MRTAVDRCVARGRVIPAATLARDAGVTETFLYRHEAQPCPLCENTFGGGPINYFRSRMQSIAEARDSGVTREGLVTTASLRADLANQRAANQRLRQQIRALEHRLGEVLGTQSRTDMTELARLAHGSESGDAQRILELSEQNRSLAGQLADRNEELDAVRRLNTELTRRINSTEQSAHLGRRPAHIPSTRETGCGDDLSS
>NZ_CP024892.1|WP_102032165.1|210777_212613_-|site-specific-integrase
MTEPVVVRLDSADTDLTKAVAAQYECDVWDLRSFGYPGKWARFRGRADRAQRGATGIGQGWLLDMVKQWVLRAALRRVSPAYLDEVILAVALLSSTLQDREDHGVHPTALGRADITTHLIRLGHLREEGRLTLKGQQRMVRYLARVLEDAEAWGLSAPGAVAAGLPASFAVLRADLPAGRARSVDEPSRALPRAVIRQLLDPAALNRLEDLAGAWAVNWFTLALGTGRRPGELCALPLDGCLERSVHRDDSGDEHTHPVLVHDMTKIAVTGYRLPISAASAAVIEDQQNRVRQTYPMTDPARLPLFPTPHRNPDGLRSVPTWHVHTVLRRWVMDLPELWCPDLDEEGRIAGAGHAVGDGRQPFPRDKIYPYALRHTWAQDHADSGTSLEVLQDLLGHTKPTTTQVYYRLTPTRRRDAVLRLSRLQLTHRGSLTSAGLRALEPAEELRTQIGSTAVPFGICIEPANVQAGGHACPYRMRCLGCTHFRTDPSYLPELREHLSQLLTSRERIRAADAAEIEPWVRSSAMPTDEEIDRVRHLIRRCEGELDGLTPTERDEIVRCITQVRTARAQVARVVPLELAGIVRHNDPDVFPSAFERLRSPGTTASTGVAR
>NZ_CP024892.1|WP_102032166.1|212609_213755_-|tyrosine-type-recombinase/integrase
MSYRRLRITTPDLGAYYGVVDDDYRPHELASRWLEVRFYGRAQAETTSAAYASSVALFPTWAEQTGRDLPAAAKDLHLFAGYLATTPLTAGRSATRPRCASRVNRILVAVREFYRFAVAEQQLPAAVLGDLFDLPDEPNFRGRAGPRVRHRRREMRRGGPPEGATAAEVVALVESAHTFRDRFMLVLMAVTGLRVGQVLGLRRQDIHFVPDAGALGLPVPGDTGPRCRTCGEHLHVVRRTNPNGAWSKARFDFVVPVPPIVVALYDRYLDERDRCPAAADNDMLIVALRGPTQGNAISPRNLHKIVERLATNAGLRPIHPHMLRHFAASEHLAAGTSRDELQALFGWSQPSSADPYIHVGADRTRAAVDRLATRLSEETTS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198126-198157	0	1.0
NZ_CP024892_1	1.2\|198194\|33\|NZ_CP024892\|CRT	198194-198226	33	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198194-198226	0	1.0
NZ_CP024892_1	1.3\|198263\|34\|NZ_CP024892\|CRT	198263-198296	34	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198263-198296	0	1.0
NZ_CP024892_1	1.4\|198333\|36\|NZ_CP024892\|CRT	198333-198368	36	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198333-198368	0	1.0
NZ_CP024892_1	1.5\|198195\|32\|NZ_CP024892\|PILER-CR	198195-198226	32	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198195-198226	0	1.0
NZ_CP024892_1	1.6\|198264\|33\|NZ_CP024892\|PILER-CR	198264-198296	33	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198264-198296	0	1.0
NZ_CP024892_1	1.7\|198334\|35\|NZ_CP024892\|PILER-CR	198334-198368	35	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	198334-198368	0	1.0
NZ_CP024892_2	2.1\|202874\|31\|NZ_CP024892\|CRISPRCasFinder	202874-202904	31	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	202874-202904	0	1.0
NZ_CP024892_2	2.2\|202941\|32\|NZ_CP024892\|CRISPRCasFinder,PILER-CR,CRT	202941-202972	32	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	202941-202972	0	1.0
NZ_CP024892_2	2.3\|203009\|32\|NZ_CP024892\|CRISPRCasFinder,PILER-CR,CRT	203009-203040	32	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	203009-203040	0	1.0
NZ_CP024892_2	2.4\|203077\|31\|NZ_CP024892\|CRISPRCasFinder,PILER-CR,CRT	203077-203107	31	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	203077-203107	0	1.0
NZ_CP024892_2	2.5\|203144\|37\|NZ_CP024892\|CRISPRCasFinder,PILER-CR,CRT	203144-203180	37	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	203144-203180	0	1.0
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1419490-1419521	7	0.781
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1784456-1784487	7	0.781
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	412614-412645	7	0.781
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	186713-186744	8	0.75
NZ_CP024892_1	1.1\|198126\|32\|NZ_CP024892\|CRT	198126-198157	32	MK686072	Streptomyces phage RosaAsantewaa, complete genome	21170-21201	9	0.719
NZ_CP024892_2	2.3\|203009\|32\|NZ_CP024892\|CRISPRCasFinder,PILER-CR,CRT	203009-203040	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	151639-151670	10	0.688

1. spacer 1.1|198126|32|NZ_CP024892|CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
ggtgacgcgatctataccccgcaggatgtcgt	Protospacer
********************************

2. spacer 1.2|198194|33|NZ_CP024892|CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtatccggtgtgcaaggacagacccgcgaacga	CRISPR spacer
gtatccggtgtgcaaggacagacccgcgaacga	Protospacer
*********************************

3. spacer 1.3|198263|34|NZ_CP024892|CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcggtcgaatgtgagaacctcacgttcggcaag	CRISPR spacer
ctcggtcgaatgtgagaacctcacgttcggcaag	Protospacer
**********************************

4. spacer 1.4|198333|36|NZ_CP024892|CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggagtcatccgccgataaaggcgcaggctacatc	CRISPR spacer
ctggagtcatccgccgataaaggcgcaggctacatc	Protospacer
************************************

5. spacer 1.5|198195|32|NZ_CP024892|PILER-CR matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatccggtgtgcaaggacagacccgcgaacga	CRISPR spacer
tatccggtgtgcaaggacagacccgcgaacga	Protospacer
********************************

6. spacer 1.6|198264|33|NZ_CP024892|PILER-CR matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

tcggtcgaatgtgagaacctcacgttcggcaag	CRISPR spacer
tcggtcgaatgtgagaacctcacgttcggcaag	Protospacer
*********************************

7. spacer 1.7|198334|35|NZ_CP024892|PILER-CR matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

tggagtcatccgccgataaaggcgcaggctacatc	CRISPR spacer
tggagtcatccgccgataaaggcgcaggctacatc	Protospacer
***********************************

8. spacer 2.1|202874|31|NZ_CP024892|CRISPRCasFinder matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

actggacaaacgttcagtccaccacacccaa	CRISPR spacer
actggacaaacgttcagtccaccacacccaa	Protospacer
*******************************

9. spacer 2.2|202941|32|NZ_CP024892|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgggcctcgctggaatcaagctggagtggc	CRISPR spacer
tttgggcctcgctggaatcaagctggagtggc	Protospacer
********************************

10. spacer 2.3|203009|32|NZ_CP024892|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

catatggatccggcgggcatccgagaggctat	CRISPR spacer
catatggatccggcgggcatccgagaggctat	Protospacer
********************************

11. spacer 2.4|203077|31|NZ_CP024892|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtgtggggtgaggtcgcagacctgtaccc	CRISPR spacer
ctgtgtggggtgaggtcgcagacctgtaccc	Protospacer
*******************************

12. spacer 2.5|203144|37|NZ_CP024892|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 0, identity: 1.0

atgggtcacgagcaatcaggactcatcagcgtggcag	CRISPR spacer
atgggtcacgagcaatcaggactcatcagcgtggcag	Protospacer
*************************************

13. spacer 1.1|198126|32|NZ_CP024892|CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.781

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
ggtgaggcgatctatacgccgcagtgtgcgtt	Protospacer
***** *********** ****** .**.  *

14. spacer 1.1|198126|32|NZ_CP024892|CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.781

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
ggtgaggcgatctatacgccgcagtgtgcgtt	Protospacer
***** *********** ****** .**.  *

15. spacer 1.1|198126|32|NZ_CP024892|CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
ggcgaaatgatctataccccgaaggatttcga	Protospacer
**.** ..************* ***** ***

16. spacer 1.1|198126|32|NZ_CP024892|CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
gctgacgcgatctatacccgccaggagacgat	Protospacer
* *****************  ***** .. .*

17. spacer 1.1|198126|32|NZ_CP024892|CRT matches to MK686072 (Streptomyces phage RosaAsantewaa, complete genome) position: , mismatch: 9, identity: 0.719

ggtgacgcgatctataccccgcaggatgtcgt	CRISPR spacer
ggtgacgcgatctatgcccggcagatcgcata	Protospacer
***************.*** ****. .*.

18. spacer 2.3|203009|32|NZ_CP024892|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

catatggatccggcgggcatccgagaggctat	CRISPR spacer
tggcgggatgcggcgggcatccgaaaggcgtg	Protospacer
..   **** **************.****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

828 : 51491

Mycobacterium_phage(37.5%)

transposase,integrase

attL 9146:9178|attR 54098:54130

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102032059.1\|828_1473_-\|transposase	transposase	A0A222ZN33	Mycobacterium_phage	7.5e-15	48.7
WP_102032061.1\|2036_2402_-	hypothetical protein	Q9MBI9	Corynebacterium_phage	5.3e-10	43.6
WP_102032043.1\|4559_5177_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_102032058.1\|5230_5986_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.5e-14	29.6
WP_102032044.1\|6089_9083_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
9146:9178	attL	NA	NA	NA	NA
WP_014203931.1\|9759_11199_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_102032062.1\|11452_12085_-	hypothetical protein	NA	NA	NA	NA
WP_102032063.1\|12163_13273_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_190242447.1\|13521_13875_-	MmoB/DmpM family protein	NA	NA	NA	NA
WP_014203928.1\|13874_14915_-	aromatic/alkene monooxygenase hydroxylase subunit beta	NA	NA	NA	NA
WP_102032181.1\|14945_16034_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_190242448.1\|16157_17642_-	methane monooxygenase	NA	NA	NA	NA
WP_102032066.1\|17944_19447_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_165965805.1\|19599_19923_-	EthD family reductase	NA	NA	NA	NA
WP_190242449.1\|20843_21452_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_102032069.1\|21792_23202_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_014203922.1\|23526_24816_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_102032070.1\|25019_27947_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_102032071.1\|28242_28725_-\|transposase	transposase	A0A222ZN33	Mycobacterium_phage	5.6e-15	48.7
WP_102032043.1\|31814_32432_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_102032058.1\|32485_33241_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.5e-14	29.6
WP_102032044.1\|33344_36338_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_006931038.1\|36678_38037_-	cytochrome P450	V5UQK0	Mycobacterium_phage	1.0e-93	42.1
WP_029540292.1\|39062_39779_+	ParA family protein	NA	NA	NA	NA
WP_006931050.1\|39771_40290_+	hypothetical protein	NA	NA	NA	NA
WP_017681395.1\|40499_41495_+	DUF2637 domain-containing protein	NA	NA	NA	NA
WP_017681396.1\|41870_43346_-	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_006936885.1\|43564_43873_-	hypothetical protein	NA	NA	NA	NA
WP_006936883.1\|44022_44679_+	hypothetical protein	NA	NA	NA	NA
WP_102032047.1\|44765_45929_-	arabinosyltransferase domain-containing protein	NA	NA	NA	NA
WP_124259314.1\|46406_46700_+	hypothetical protein	NA	NA	NA	NA
WP_006936872.1\|47009_47192_+	hypothetical protein	NA	NA	NA	NA
WP_017681401.1\|47454_48198_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003939268.1\|49296_50106_-	AAA family ATPase	R9U430	Rhizobium_phage	8.8e-05	21.8
WP_003939267.1\|50105_51491_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JGQ6	uncultured_Caudovirales_phage	6.8e-05	22.8
54098:54130	attR	NA	NA	NA	NA

DBSCAN-SWA_2

77069 : 152688

Corynebacterium_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_190242452.1\|77069_78500_+\|transposase	transposase	NA	NA	NA	NA
WP_029547237.1\|78691_79042_-	hypothetical protein	NA	NA	NA	NA
WP_102032086.1\|79375_80494_-	hypothetical protein	NA	NA	NA	NA
WP_102032087.1\|80541_84819_-	relaxase domain-containing protein	NA	NA	NA	NA
WP_102032088.1\|85073_85649_+	hypothetical protein	NA	NA	NA	NA
WP_102032089.1\|85858_87211_+	VWA domain-containing protein	NA	NA	NA	NA
WP_102032090.1\|87694_88660_-	Fic family protein	NA	NA	NA	NA
WP_029547296.1\|88661_88850_-	hypothetical protein	NA	NA	NA	NA
WP_102032091.1\|88930_97942_-	DEAD/DEAH box helicase family protein	A0A240F4T3	Ochrobactrum_phage	1.4e-175	30.8
WP_102032092.1\|98037_98670_-	hypothetical protein	NA	NA	NA	NA
WP_102032094.1\|99238_99430_+	hypothetical protein	NA	NA	NA	NA
WP_102031818.1\|100485_102027_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_102031817.1\|102073_102838_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-25	29.8
WP_190242434.1\|105063_105642_+	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A248SJV3	Salicola_phage	9.7e-14	34.2
WP_102032037.1\|105670_106156_+	hypothetical protein	NA	NA	NA	NA
WP_145961985.1\|106241_107339_+	hypothetical protein	S5VKI3	Leptospira_phage	9.4e-18	29.5
WP_102032096.1\|107284_108223_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_145961986.1\|108219_108678_+	hypothetical protein	NA	NA	NA	NA
WP_190242450.1\|108674_109679_+	aldo/keto reductase	NA	NA	NA	NA
WP_190242451.1\|109695_110670_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_102032100.1\|112593_113868_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	2.1e-37	28.3
WP_029547282.1\|114240_115812_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_145961987.1\|115995_116988_-	hypothetical protein	NA	NA	NA	NA
WP_102031812.1\|117273_118521_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	4.8e-111	51.9
WP_145961988.1\|118751_118970_-\|transposase	transposase	NA	NA	NA	NA
WP_102030868.1\|119089_120334_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	1.0e-81	44.7
WP_190242437.1\|120349_120565_-\|transposase	transposase	NA	NA	NA	NA
WP_145961989.1\|120790_121540_-	hypothetical protein	NA	NA	NA	NA
WP_102032184.1\|121901_122648_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_102032103.1\|122839_124390_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_102032185.1\|124566_125640_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_145961990.1\|125885_126194_-	hypothetical protein	NA	NA	NA	NA
WP_190242438.1\|126309_126552_-	co-chaperone GroES	NA	NA	NA	NA
WP_102032106.1\|126686_128072_+	hypothetical protein	NA	NA	NA	NA
WP_102032107.1\|128101_129814_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_145961991.1\|129832_130855_-	hypothetical protein	NA	NA	NA	NA
WP_190242439.1\|130929_132252_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_102032110.1\|132308_133751_-	hypothetical protein	NA	NA	NA	NA
WP_145961992.1\|133747_135187_-	hypothetical protein	NA	NA	NA	NA
WP_102032112.1\|135315_135852_-	NYN domain-containing protein	NA	NA	NA	NA
WP_102032113.1\|136274_136736_-	hypothetical protein	NA	NA	NA	NA
WP_102032114.1\|136937_138218_-	hypothetical protein	NA	NA	NA	NA
WP_145961993.1\|138347_138689_-	hypothetical protein	NA	NA	NA	NA
WP_145961994.1\|138850_139111_-	hypothetical protein	NA	NA	NA	NA
WP_102032117.1\|139229_140021_-	hypothetical protein	NA	NA	NA	NA
WP_102032118.1\|140350_140674_-	hypothetical protein	NA	NA	NA	NA
WP_102032119.1\|140812_143029_-	ATP-binding protein	NA	NA	NA	NA
WP_145961995.1\|143469_144969_+	hypothetical protein	NA	NA	NA	NA
WP_102032120.1\|145496_146051_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_102032121.1\|146668_147802_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_145961996.1\|148362_149265_+	MFS transporter	NA	NA	NA	NA
WP_102032123.1\|149576_149768_+	hypothetical protein	NA	NA	NA	NA
WP_029547282.1\|151116_152688_+\|transposase	IS1634 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

162912 : 225979

Gordonia_phage(16.67%)

transposase,integrase

attL 182070:182086|attR 229511:229527

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_190242441.1\|162912_164403_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_102032131.1\|165096_165849_+	phage Gp37/Gp68 family protein	A0A2P1A0W3	Gordonia_phage	2.6e-59	43.6
WP_102032132.1\|165845_167009_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA
WP_102032133.1\|167029_168202_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_102032134.1\|168198_169398_-	DNA methyltransferase	A0A1B0XVT8	Campylobacter_phage	8.4e-20	33.0
WP_102032135.1\|169780_170794_-	hypothetical protein	NA	NA	NA	NA
WP_102032188.1\|170800_171931_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_102032137.1\|172789_173020_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_102032138.1\|173224_174841_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_102031149.1\|175159_176482_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	6.9e-07	25.8
WP_190242442.1\|177098_177749_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_190242443.1\|178433_178898_-	NYN domain-containing protein	NA	NA	NA	NA
WP_145961998.1\|179519_180119_+	hypothetical protein	NA	NA	NA	NA
WP_102032140.1\|180072_180465_-	hypothetical protein	NA	NA	NA	NA
WP_145961999.1\|180626_181514_+	hypothetical protein	NA	NA	NA	NA
WP_102032142.1\|181553_182282_+	hypothetical protein	NA	NA	NA	NA
182070:182086	attL	NA	NA	NA	NA
WP_102032143.1\|182375_184130_+	hypothetical protein	NA	NA	NA	NA
WP_102032144.1\|184126_184798_+	hypothetical protein	NA	NA	NA	NA
WP_102032145.1\|184801_186535_+	hypothetical protein	NA	NA	NA	NA
WP_102032146.1\|186531_188073_+	hypothetical protein	NA	NA	NA	NA
WP_102032147.1\|188069_188798_+	hypothetical protein	NA	NA	NA	NA
WP_102032148.1\|188794_190924_+	hypothetical protein	NA	NA	NA	NA
WP_102032149.1\|190972_191425_-	hypothetical protein	NA	NA	NA	NA
WP_145962000.1\|191450_192179_-	hypothetical protein	NA	NA	NA	NA
WP_102032151.1\|192242_194333_-	hypothetical protein	NA	NA	NA	NA
WP_102032152.1\|194396_195533_-	hypothetical protein	NA	NA	NA	NA
WP_190242444.1\|195731_197672_-	hypothetical protein	NA	NA	NA	NA
WP_145962002.1\|198734_199055_+	hypothetical protein	NA	NA	NA	NA
WP_145962003.1\|199094_200648_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_102032155.1\|200665_200959_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_174824807.1\|201140_201958_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.9e-23	33.2
WP_145962004.1\|202025_202211_+	hypothetical protein	NA	NA	NA	NA
WP_102032156.1\|202207_202474_+	hypothetical protein	NA	NA	NA	NA
WP_102032157.1\|202470_202767_+	hypothetical protein	NA	NA	NA	NA
WP_102032158.1\|204819_205068_+	hypothetical protein	NA	NA	NA	NA
WP_102032159.1\|205155_205884_-	hypothetical protein	NA	NA	NA	NA
WP_102032160.1\|206406_206652_+	hypothetical protein	NA	NA	NA	NA
WP_102032161.1\|206818_207064_-	hypothetical protein	NA	NA	NA	NA
WP_102032189.1\|207208_207400_-	hypothetical protein	NA	NA	NA	NA
WP_102032162.1\|207799_208660_-	hypothetical protein	NA	NA	NA	NA
WP_145962005.1\|209898_210120_-	hypothetical protein	NA	NA	NA	NA
WP_145962006.1\|210103_210706_-	hypothetical protein	NA	NA	NA	NA
WP_102032165.1\|210777_212613_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_102032166.1\|212609_213755_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_102032167.1\|214179_214479_-	hypothetical protein	NA	NA	NA	NA
WP_102032190.1\|214838_215147_-	hypothetical protein	NA	NA	NA	NA
WP_102032168.1\|215301_215823_-	hypothetical protein	NA	NA	NA	NA
WP_190242445.1\|216340_217006_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_102032170.1\|217002_219141_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_102032171.1\|219137_220241_+	ATP-binding protein	NA	NA	NA	NA
WP_102032172.1\|220237_222583_+	TniQ family protein	NA	NA	NA	NA
WP_003939264.1\|222839_223436_-	cadmium resistance transporter	NA	NA	NA	NA
WP_185113669.1\|223432_223762_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_003939266.1\|223989_224592_+	recombinase family protein	A0A219YB42	Aeromonas_phage	2.1e-35	47.3
WP_003939267.1\|224593_225979_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JGQ6	uncultured_Caudovirales_phage	6.8e-05	22.8
229511:229527	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP024892.1|WP_102032160.1|206406_206652_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP024892.1|WP_102032160.1|206406_206652_+|hypothetical-protein

206406_206652_+

81 aa aa

162912-225979

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP024890_1	Orphan	1.1\|1592800\|17\|NZ_CP024890\|CRISPRCasFinder	1592800-1592816	17	186031-186047	2

1. spacer 1.1|1592800|17|NZ_CP024890|CRISPRCasFinder matches to NZ_CP024892 position: 186031-186047, mismatch: 2

cgaccacgcgatccggc	CRISPR spacer
cgaactcgcgatccggc	Protospacer
*** * ***********

3. NZ_CP024890

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024890_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_1

1592772-1592889

Orphan

Consensus_repeat	Method
ACCACGCGATCCGGCACCGCGAAATCCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP024890_1

>merge|NZ_CP024890|1|1592772-1592889|CRISPRCasFinder
ACGACGCGGTCGGACACCGCGAAGTCGACGACCACGCGATCCGGCACCGCGAAATCCACCACCGCACGATCCGGCACCGGGAAATCCACCACCACACGATCCGGCACCGCGAAATCCA

>NZ_CP024890|1|1|1592772-1592889|CRISPRCasFinder
ACGACGCGGTCGGACACCGCGAAGTCGA	CGACCACGCGATCCGGC
ACCGCGAAATCCACCACCGCACGATCCG	GCACCGGGAAATCCACC
ACCACACGATCCGGCACCGCGAAATCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_010593972.1\|1582870_1583263_+\|YccF-domain-containing-protein	unknown	unknown	gnl\|CDD\|236975
NZ_CP024890.1\|WP_010593964.1\|1593143_1593572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_010593971.1\|1583708_1584293_+\|DUF3235-domain-containing-protein	unknown	unknown	gnl\|CDD\|369056
NZ_CP024890.1\|WP_040274152.1\|1594925_1595912_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274648
NZ_CP024890.1\|WP_010593965.1\|1591023_1592430_-\|citrate:proton-symporter	unknown	unknown	gnl\|CDD\|225407
NZ_CP024890.1\|WP_010593954.1\|1601834_1602446_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP024890.1\|WP_010593967.1\|1588631_1589300_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP024890.1\|WP_102030928.1\|1586965_1588624_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_CP024890.1\|WP_010593955.1\|1601439_1601853_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319914
NZ_CP024890.1\|WP_026138092.1\|1593677_1594346_+\|DUF3239-domain-containing-protein	unknown	unknown	gnl\|CDD\|378679
NZ_CP024890.1\|WP_172603660.1\|1582053_1582464_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP024890.1\|WP_003936421.1\|1584357_1584546_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_010593958.1\|1598263_1599082_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260
NZ_CP024890.1\|WP_010593956.1\|1600517_1601429_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236600
NZ_CP024890.1\|WP_010593959.1\|1597398_1598271_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP024890.1\|WP_010593960.1\|1596015_1597365_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NZ_CP024890.1\|WP_010593973.1\|1582631_1582874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_040274158.1\|1584606_1586889_+\|helicase-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|379300
NZ_CP024890.1\|WP_102030929.1\|1589281_1590955_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP024890.1\|WP_010593962.1\|1594348_1594912_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112

Protein	Function_ID	Function_description	E-value
NZ_CP024890.1\|WP_010593972.1\|1582870_1583263_+\|YccF-domain-containing-protein	gnl\|CDD\|236975	PRK11770, PRK11770, YccF domain-containing protein.	4.12171e-54
NZ_CP024890.1\|WP_010593971.1\|1583708_1584293_+\|DUF3235-domain-containing-protein	gnl\|CDD\|369056	pfam06737, Transglycosylas, Transglycosylase-like domain. This family of proteins are very likely to act as transglycosylase enzymes related to pfam00062 and pfam01464. These other families are weakly matched by this family, and include the known active site residues.	1.71106e-35
NZ_CP024890.1\|WP_040274158.1\|1584606_1586889_+\|helicase-associated-domain-containing-protein	gnl\|CDD\|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	1.61788e-41
NZ_CP024890.1\|WP_172603660.1\|1582053_1582464_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.77424e-23
NZ_CP024890.1\|WP_010593965.1\|1591023_1592430_-\|citrate:proton-symporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	1.78994e-167
NZ_CP024890.1\|WP_010593954.1\|1601834_1602446_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.61939e-20
NZ_CP024890.1\|WP_010593967.1\|1588631_1589300_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	3.29851e-68
NZ_CP024890.1\|WP_102030928.1\|1586965_1588624_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.17154e-117
NZ_CP024890.1\|WP_010593955.1\|1601439_1601853_+\|VOC-family-protein	gnl\|CDD\|319914	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.71437e-36
NZ_CP024890.1\|WP_102030929.1\|1589281_1590955_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	4.91335e-125
NZ_CP024890.1\|WP_010593958.1\|1598263_1599082_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.1227e-132
NZ_CP024890.1\|WP_010593956.1\|1600517_1601429_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236600	PRK09636, PRK09636, RNA polymerase sigma factor SigJ; Provisional.	7.1002e-137
NZ_CP024890.1\|WP_010593959.1\|1597398_1598271_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	2.30096e-69
NZ_CP024890.1\|WP_010593960.1\|1596015_1597365_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP024890.1\|WP_040274152.1\|1594925_1595912_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	3.77418e-95
NZ_CP024890.1\|WP_026138092.1\|1593677_1594346_+\|DUF3239-domain-containing-protein	gnl\|CDD\|378679	pfam11580, DUF3239, Protein of unknown function (DUF3239). This bacterial family of proteins may be membrane proteins however this cannot be confirmed. Currently there is no known function.	1.46747e-52
NZ_CP024890.1\|WP_010593962.1\|1594348_1594912_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.81208e-25

>NZ_CP024890.1|WP_010593965.1|1591023_1592430_-|citrate:proton-symporter
MLVFLGFLMVAVFMYLILSKRATPVVGLILVPVAFGLFAGAGLDLGDMIVDGVTDLAPTAALLFFAIIFFGIMIDVGLFDPLVRLILRLVRDDPARLVVGTAVLAMIVSLDGDGSTTFIITTSAMLPLYLKLRVSPVILTVVAGLANATMNIIPWGGPTVRAASALGLSPSDVFVPMIPSLLVGLVVVLGFALHLGVMERRRLGKLVWTAEPVLAGVGRGGSTGSGGSGGSRATGTGPGADAGDSDDQTGGFAAALDPNRATLRPKLLPFNALLTVALLVVLGLDVLPIPVLFMIAAGLALAVNFPRVADQSEAIVRHSSSIVSVVAMVFAAAVLTGVFQGTGMVESMALWLTGVIPDALGPFLAVITGVLSIPFTFFMTNDAFYFGVLPVLAETAAQYGIEPVEMARASITGQPVHMQSPLVPAILLLVTLAGVQLADHHRKVLWRATIVSLTMLVVGVALGQIPLG
>NZ_CP024890.1|WP_102030929.1|1589281_1590955_-|sensor-histidine-kinase
MRLRTQVLLLQSAVVAAALGLGFAAFVTTTEHRVTDEHGQRALAVARTVAVDATVRAEVARLAAADDGVVAPGNPELASGTVQQAAEAVRDATGALFVVVTDEQGLRLAHPDPDLLGLRVSTDPDEALAGREVVRSERGTLGDSVRAKVPVVAPGSDRVVGEVSVGIATDRIRSELREDVAQASLVAAGALACGAAGSALLARRWKRLTLGLEPEQLAELVREQEVVLHGIGEGVIGADTEGTVTVVNAEARRLLDLRGGAGDRLEGVGLTPRLLDVARSPRDEPVAAAVGDRIVLAVARRVRRDGRDLGTVMSVRDRTDVEKLTRELDAVQSLTTALRAQRHETANRLHLLYGLLQQGRSAQATEYLEQLLGAGPAGRPLDGLDAVADPYLHAFLTAKAAHARESGVTLVLGENTWVRGTVRCPVDVTTVLGNLLDNAIEAARERGHDPAEVEVELVEAGRDLHVAVADTGAGVAAGRAEEVFGEGVTTHADGAVPGGRGMGLALARQVARQHGGDVTLADPGGRRTPDNPTGGAVFVATLIDVLDEGDTGWADPI
>NZ_CP024890.1|WP_010593967.1|1588631_1589300_-|response-regulator
MGGSDLTVLVVDDDFRVAELHASVVAAVAGFRVAAVAGTLAAARAAVRETAIDLALVDVYLPDGSGIDLIRELDCDAFVLGAAAEGTTVRAALAAGASGYLVKPFPNTELARRLSAYAQYRRLVAGAELSQAEIDSALAALRPAPSGAADRAPRSVTKELVLQALSSSATPMSAGEVAVTIGVSRATAQRYLAALVTKGQLRMQLRYGSTGRPEQEYRLPAG
>NZ_CP024890.1|WP_102030928.1|1586965_1588624_+|DEAD/DEAH-box-helicase
MPDGPLIVQSDKTLLLEVDHALANEARQAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVVDALVSHSRFAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVMRNKKIAPMLGARLDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHAISLDFESHPWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWKRELIARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRKSKGEYRNLELFDSRDWGLMIYDEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVRVTLTDAERMAYAVAEPEERYKLCSTAHTKIAVVKSILARHRDSPTLIIGAYLDQLDELGEALGAPVIKGSTRNKEREELFDRFRAGELKVLVVSKVANFSIDLPEASVAVQVSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRITDADDLLGPAIG
>NZ_CP024890.1|WP_040274158.1|1584606_1586889_+|helicase-associated-domain-containing-protein
MTATDPAAPETGPESLARWLADRRDADLGELLRARPDLVVPPPATMTVLAGRAQQRASVFRAADELSVLDFGVVEALTRLGADRVPVTRRALLDSLSGRVTAKNVDRSLEALRRLSLVWGPAEGLRVVEAAAATVPWRLGRGPDPDPDPQDLGAVLADLDPARRSLLDTLARTSPVGRTRDAAPDTPADRPVQRLIAAGLLIRLDDETVELPHRVGQALRDEAPFDPAALTPPRPLPATHVVADVNATAAGAALELLRHCENLIDALGALPAPALKSGGLGVRELRRLAKTVDVDEQLAALLVEVLAAAGLIARGMPQPAPTTDIDDYWAPTTAADGWSNAPPAQRWAVLAGAWLDAPRRMWLVGRRDATDKPIAALSDEARSTAAPRERRLLLELLAEVPGSAPDADAARAVLAWRRPRWAARLGGDTVAETLREATALAVVAHGALASPGKALLHGGDPDAEMAAVLPEPVDYVLVQADLTVVAPGPLVPELADRIALVADVESAGAATVYRVTEAGVRRALDAGTGAADLHALFATHSRTPVPQALTYLIDDVARRHGRLRAGVAASFVRSDDPALLAEVLGHPVAARLALRAVAPTVAISQAPLAEVLAELRGAGFAPAGEDATGAVLDLRPRGARVSVPRARPRYAGPMPPTGEQLDTLIRTLRAGDRAAAAPRGATVRGDGSRTGGAATMALLQLAAHDKRSVRIGYVDAQGVATHRIVDPVAVGGGQLEAFDPAAGTVRSFVLHRITTVALVD
>NZ_CP024890.1|WP_003936421.1|1584357_1584546_-|hypothetical-protein
MADNSKKQYVDPGWPKVADGDHAVTELSSTRSGPLSPYGEEMEFPLPVDALPYTHPRTVINR
>NZ_CP024890.1|WP_010593971.1|1583708_1584293_+|DUF3235-domain-containing-protein
MSGRHRKPTNTGRTVAKFALTSAVLGVTGVAFSGTANAAPDSDWDRLAQCESGGNWGINTGNGYQGGLQFSPSTWNAYGGGEYAATANQASREEQIVVAERVLAGQGWGAWPSCSSSLGLSSAPTQRSAPSTSAGTVQNTPVVEAAPEAPELPALPAEAQGLRAGFEQGLEALRQAGIAVDQNLVDAVNAALPN
>NZ_CP024890.1|WP_010593972.1|1582870_1583263_+|YccF-domain-containing-protein
MRILLNIIWLVFGGLWLALGYFVAGLICFVLIITIPFGIAAFRIGVYALWPFGKTVVDKPTAGAGSLIGNVIWVIVAGIWLALGHVVTAIAMAITIIGIPLAVANLKMVPISLLPLGKDIVPVDNRPSYM
>NZ_CP024890.1|WP_010593973.1|1582631_1582874_+|hypothetical-protein
MERVGTSSSSVPGNGLLKAALACFAVGVVAVVAIFLTPVVTDGRPGLVLYLLTLAWPLGFVLALTFALRSGRRARGRDRT
>NZ_CP024890.1|WP_172603660.1|1582053_1582464_-|cold-shock-protein
MPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPSGVEGLKPGQRVEFGMAAGRRGPQALSLKLLDPLPSVRQGGRREAAPQKRHTPDELHGMVEDMIKLLEATVQPELRKGRHPERKTAQRISEVMRAVARELDS
>NZ_CP024890.1|WP_010593964.1|1593143_1593572_+|hypothetical-protein
MATSERPGPGLDDRAPRRKRRPFAAAVEWLKTHVRRLARAVRKRRDAVLRDAPASTDQLIDTVTEGSASTRAVLKGAGAALTGKNPVWAAVKGLISGLSTRTKILLALLVVLVALLAPVLLVVALLALLVAWLVAAVRAATR
>NZ_CP024890.1|WP_026138092.1|1593677_1594346_+|DUF3239-domain-containing-protein
MRRFDFPVDLPHAKAVNQTVAEVRRLRVSAIVLAVLFTVAAVWLIAVGRAWSFVVAAVVVVAALTSAWVAVWAPRKVGTIQDLYRDSPLVPAVVSEIRPRGMTLLALVDIAKPQTDGHRYALVARDVTAVPGHRVRVGERVPSVAVLSDRTTRNTSGVWQMVSPMPIAWGTRDASVLREAAAAIDETEWKVLEGKLSRSDEVAASEERRLVLDPKDLPADLR
>NZ_CP024890.1|WP_010593962.1|1594348_1594912_+|GNAT-family-N-acetyltransferase
MRPVVLTGSTVVLTVPRAGDVDAITAACRDRSIVRWTTVPDPYTRADAQRFVGDVVPAGWAAHSPVWAVRTSADGPLLGTVGLIERDASAAEIGYWIAPAARARGLATESVNLLCDYAFRSDGLKLDRIEWRALAGHRASAAVARRVGFRFEGVQRRGILQRGSRHDAWVAGLLPDDPRVPADGWPM
>NZ_CP024890.1|WP_040274152.1|1594925_1595912_-|LLM-class-F420-dependent-oxidoreductase
MRFGMFVPQGWRLDLVGIEPAEQWRVMRDLAQRADSGPWESIWVYDHFHTVPVPTEEATHEAWSLVSAFAAVTERVRIGQMCTAMGYRNPAYLAKVAATADIVSGGRIEMGIGGGWYEHEWRAYGYGFPSPPERLRRLDEGVQIFRQAWTTGTATLHGRHYQVDGAVVRPLPLQEGGIPLWIAGGGEKVTLKIAAKYAQYTNFDGTPEGFAHKSEILRGHCAEVGTDFDAIVRSANYNVAIGRTEAEVQERLGTLRARLEPYVGPEKADGALDAFRGLPAVGTPEQIVENFRALKKQGMTYAILYFPEAAYDTSGIELFEKEVLPELL
>NZ_CP024890.1|WP_010593960.1|1596015_1597365_-|LLM-class-flavin-dependent-oxidoreductase
MSQSPKQFHLNAFLMGVGHHEAAWRHPRTDARRVLDVAHFQELAQIAERGTLDSVFFADGLAVGPRVEHNAQAIFEPITLLSAMAVVTERIGLIATASTGFNEPFNLARKFASLDHISHGRAGWNIVTSGGADEARNFGYDETPDHAGRYDRAAEFVDVATGLWDSWEDDAVELDVESGRFADPGKVHPVDHDGPRFSVRGPLNTPRSPQGRPVLVQAGSSESGKDFAARYAEAVFTAQRTLAEGQAFYRDLKARVAAVGRDPHSLKVLPGIVPFIGDTEVAAKALEQEFTDLISPAYSLRQLSGMVGVDLTDHALDAPLPPLPPLDRIQGNKSRYELVKNLAENEHLTVRQLIGKLGGGRGHRTFAGTAEQIADDLQLWFEGGAADGFNVMPPYLPGGLEDFVEQVVPILRDRGLFRTEYTSTTLRGHYGLDRPAGRFDAVPARAATA
>NZ_CP024890.1|WP_010593959.1|1597398_1598271_-|ABC-transporter-permease
MSSPSATLIHPVALDGALAEQRPAPAPPARGAGTGPWIGAFVWRGLKPAVAILAFLAVWEIAPRLGLVDEVFLPPFTVVADAFAQLIGDGRLAEHLGASLSRAVTGFGIAVLVAIPLGVAIGWYRPVAEFLDPILELFRNTAALALLPVFILILGIGETSKVALVTYASTFPILLNTVSGVRTVDPLLVKSARSLGLPSYRLFQKVILPAAVPTIFTGIRMAAASSILVLIAAEMVGAKAGLGYLVTASQLNFQIPNMYAGIVAISLVGLTFNGILVAVERRLSRWRADR
>NZ_CP024890.1|WP_010593958.1|1598263_1599082_-|ABC-transporter-ATP-binding-protein
MSTTPKLRLEHVTKRFPVRGTDTAFTALDDVSLDVADGEFLVLVGPSGCGKSTLLDLLGGLSSPTSGRILLDGQPISGPGLDRGIVFQQYALLPWRTARHNIEFGLEAKGLPRRQRRERAEHYLELVGLRGFGDRYPHELSGGMKQRVAIARSLAFDPEVLLMDEPFAALDAQTRESLQDELLRIRHETGKTILFITHGIDEAVYLGQRVAVLTSRPGRVEAVVDIDIDRTVDDVRSGEAFRHYRHRIWSLLHSDVERAQNHGAAIQEVHHV
>NZ_CP024890.1|WP_010593956.1|1600517_1601429_+|sigma-70-family-RNA-polymerase-sigma-factor
MRTAVLADAFEQHRPHLLSVAYRLTGSVADAEDAVQDAWLRLDRADADGIDDLRAWLTTVVGRLCLDRLRSAAVRRENYVGQWLPEPIVTPVGGPSSPDPLEAVVRQEDSRMAAMVVLDTLTPAQRVAFVLHDGFAVPFDEIAAILDVTPASARQLASRGRRAVAAAPPPVPAAEHVEAVQRLMTALASGDLAAVVAALDPDARVIGDAGGTTRTAINVVVGADRFARFFLGLMQRYGAEAFLAGTPALVNGELGFVSAGSPGDGTRRAFAGRVVGCTVRDGRVWAAYDMANPDKLRGVRLDG
>NZ_CP024890.1|WP_010593955.1|1601439_1601853_+|VOC-family-protein
MEPRLSFVTLAVADLERTRRFYVDGLGWTPVVDVPGEVLMIQVGPHLVLSLWDEQHFAAEVGPVRRSGVPPVTLAHNVADRADVDRVLDTARRAGADPVSDAVEREWGGYTGYFADPDGFRWEIAWNPGPIGQLVLP
>NZ_CP024890.1|WP_010593954.1|1601834_1602446_-|carboxymuconolactone-decarboxylase-family-protein
MARIPAVTPAEAGVATKIAYRMARRRFGEVPEPFAVYAHHPALMRASAVHETLVERASTVLPPHVRELAVYRVAWSVGCSWCVDFGTMLQRLDGLDVDRLEHIADYATSDAYSDDERAAIAYADAMTGAGGDGGAAVTVTDEQVADLERRFGRAGVVELTYQIALENMRARMNSALGIHEQGFSTDACRVPWLQDDAAQGSTS

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Crispr_ID: NZ_CP024890_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_3

1685639-1685718

Orphan

Consensus_repeat	Method
CTCGACGTCGACCATCACCTTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024890_3

>merge|NZ_CP024890|3|1685639-1685718|CRISPRCasFinder
CTCGATGTCCACCTTGACCTTCGGCGGCTTGTTCGTGGTCAGTCCATGCCACTGCGGCTCGACGTCCACCTTGATCTTCG

>NZ_CP024890|3|3|1685639-1685718|CRISPRCasFinder
CTCGATGTCCACCTTGACCTTCG	GCGGCTTGTTCGTGGTCAGTCCATGCCACTGCGG
CTCGACGTCCACCTTGATCTTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_102030945.1\|1678369_1678804_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030959.1\|1691399_1691813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030957.1\|1689858_1690653_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030952.1\|1687516_1687735_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030944.1\|1677641_1678052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961923.1\|1690825_1691302_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030956.1\|1689334_1689862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_190242373.1\|1678803_1680060_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030949.1\|1681855_1683187_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030950.1\|1683190_1684477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030954.1\|1688721_1688922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961921.1\|1680056_1680674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030948.1\|1681373_1681859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030947.1\|1680698_1681337_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_190242372.1\|1678229_1678367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961924.1\|1692315_1693074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961922.1\|1687782_1688259_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030943.1\|1676375_1677374_+\|DUF2510-domain-containing-protein	unknown	unknown	gnl\|CDD\|378480
NZ_CP024890.1\|WP_102031934.1\|1688296_1688614_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030955.1\|1688918_1689323_-\|hypothetical-protein	unknown	unknown	unknown

>NZ_CP024890.1|WP_102030950.1|1683190_1684477_-|hypothetical-protein
MAYRGLLFYGDTELINSRRTVAHILNGVRPLSLEVRHDDSWPHTARLLAHAPYVMPDEAPWHTPGDPDSLEFAGVWPMSVDGLDTSTLSREIVEGLGDGATTGVTRFGSKQITITALLVASSAAGAEFGLRWLTERLADASDVGAGTSLRFLSAAPELDPDLTGVATRAAMAGRWRTLYQVVTTAPPTVTGRFGFTRGQDTQASVFAVSWTMTALIPHVFHDPVVAIADSSLTGISTSTPTWTVAVDGECDGGCTDTGAAVLVDPEAAAAARVVRELTTVGSSGVCVPLESKRIAQAVPADPGRAARPDVVRVAVTTGAQVARGLRLQIVPGTGIEAWELAERCGALTEIGISYIPAGSTLTLDGATGTAWCDTPEGRMDAAAVVRGSGGAPWRFPLLDDIGSYGVLLDTPASLTELTVDAWTIARES
>NZ_CP024890.1|WP_102030949.1|1681855_1683187_-|hypothetical-protein
MSGLLGAASQRVTLTDYAGVLLAEIPASDTARVEWTRESRSVSVASTAVVATDQVARNVEPWVHRLNVWRGEQLAWTGPVIRTAAVGTKLTVAAADPGVWFERRKIKRGRLFSNTDLSIIAAQIIEDAFEGDDPDHIVDRMIVAPTGVFSSVTITPNTRYVSEQLADLADLGLVWQFVAGVLIVGPAVEQIELASPLGDEHFSEPVTVIKDGSKTATSVTVLGTSSSATVGVDPSEDPGFGRIERIVKADTADSVQACTVAALDELNRSKVTPRSVTVSDAARLSSSAPVQLGDLMPGVRIPIATTSTGIDLGSVMRLQTVRAIAQSGTESIMITVEDAPPPRSEMEIAEIAPTSSSPYTIVTSGGPIVCQQVWEPTGGFIGALLGWGKWVEKCTKDGKPVTRSGKEEVDTLPATKRYSYTLYVSVGTRPDFYINWELRKVES
>NZ_CP024890.1|WP_102030948.1|1681373_1681859_-|hypothetical-protein
MTEPIDAAPIDAALTAPAPAAGSGVTDQDAKTLEDMANRLGKLERSTVVRINEWALTQEYETVPLNGLTAGSDPQPQVVLKATNVTTGEGEILVPPAATQEWIAYIEALIEQKYAALSSSLSSLASRVSSLESRMSTAEDDIDDVESDVRGVERDVRSCCP
>NZ_CP024890.1|WP_102030947.1|1680698_1681337_-|hypothetical-protein
MVNVCTSEQFTEDGGILGLSPFAFAAPVAQATATSTGDGTITAHPGAGGRALIDASLHWANTYPCPVRVQAILRKQRRALSATASNIVVVRDRATTLVRTDAPGVPIAAVDPDPTAVFDSEWGGGNIVGAAATGDATPRVEVNRFAPQQTVLLPMVSVGAGESISVRFKARMYMPYGAGATGTFHPSTDANDVNSIAVLGTSIEFVAYPTAL
>NZ_CP024890.1|WP_145961921.1|1680056_1680674_-|hypothetical-protein
MICSSRQFTHSAAGVMGLSTHALPRQVAVVQSDSGGDGELKYPDDQGRVLVDQELHWANTYPCPVRVLPVIKRRSRLLHTTGSVLLVVRERLTWFVGQDREQRVQAADPDPTAVFDSEWGGGDTVGSATNGSAVPRTYSWMLDPETVHLLPFVTVPQDRSISLRLRVAAWFRHYVADNAEADINEVWVRGNTLSLLAFPTPEEMT
>NZ_CP024890.1|WP_190242373.1|1678803_1680060_-|hypothetical-protein
MSAPIGGTPVKVRGLISLAWLQRGDTTTIVWDATAVELVNAGYLEILEVLPVDPGEPAPTVAQLQAAVVAAEQARDEAVAARDQVVVDQTALADAVADAEGARDAALGHAGTAQTAAGEAQAWAAAAEAVVIDQIPNASASTKGGIRLTGDLGGTWDVPTVPGLTGKQSISDRNQPNGYAGLDGSGLVPAVLLPSYVDDVLEYANLVGFPATGSVGKIYVALDTGRIYRWSGSAYVEISASPGSTDAVPEGATNKYFTDARAQAAAAAAIAAKYTKPASGIPAADLAAAVQTSLGKADTAIQPGSQPFDVTFVAQSGTRKTGAGDVPLGVKLKRAVAFSEVTFRCETADGSGNLVVEVRKNGSATGMPTATIAAASQVAGVTVTGPWSFADGDVLTVHVTAVGTTPGKGLVADFEGVT
>NZ_CP024890.1|WP_102030945.1|1678369_1678804_-|hypothetical-protein
MPHLFVRGGSALAAMKAQRTTTQNLAAASVYEKIVGLAAVTGTHPETVLVDDEFAANGSGSWMLDVAITHGNTSSGTGVRLLRKPVGGSYSVLQTWSTSGTFHTGVSGSVTVPIERGDLVRVEAMHANGFTRDITSTVLTATLA
>NZ_CP024890.1|WP_190242372.1|1678229_1678367_+|hypothetical-protein
MQSRWKWNEHEPLFGDAGSTGSTAVLLTITTIVLVLGGLLIYTGR
>NZ_CP024890.1|WP_102030944.1|1677641_1678052_-|hypothetical-protein
MTLWHYTDRNRHARIGANGLLLPPRLTASRTSRMWTLPDWAQLRLDLIWLTDLDYPMREALGLTMHAIANDRTEIRYRVTQPAAKPQPIAWMKFRRHLDPRLVEDLELAPGAMPAHWYVATAPVRVQFDPLPALVH
>NZ_CP024890.1|WP_102030943.1|1676375_1677374_+|DUF2510-domain-containing-protein
MHPPAGWHPDPYNPALERWWDGQKWTDQTRTRGQSFPTPTTPVGSRVIPPRPRPQRTGSGSKKKWPWAAGAVALLVLLGSCIGDDESSDSPSRASTPTSTPTTKDLNTAPILTGIITEVDSPHVRVDVGVKYPLKIMLAHVGPGNCSGMSAAYGKRLVESLPVGASVTLVRMPDDAASTKMGDTAFIHLAEPGKTATETPYGRSVNETIVASGDGVFLPTIEHYRDSLPVEAQIPALMVEVPQQAEAYANALIAADVAAWDQRLGGVAACRAAQEQRDREHDEYMREHYGPDLLPDTEDDPDRNVNLPNVDLPSSGGSSGGGGGFCRHSRFC
>NZ_CP024890.1|WP_102030952.1|1687516_1687735_-|hypothetical-protein
MVLAGIHDPLRMLGFHQLLDVVEQLILETMTPEERQKYMRQMYPPPPMPDPDTETPPPGWSRDDEMAAFTDG
>NZ_CP024890.1|WP_145961922.1|1687782_1688259_-|hypothetical-protein
MTTTPENGIELERELAKISAEREALEKREAELAARTVGDTPPADTHPDPDSADDGDDEEEAPPWPHDTVEFAGETWEVRYPTTDAALVWNMQVSKHAPASVRNDAPMVFLSKHMSEKSLARMLERLADPDDSDFGFDKLDQLLTTLFTGETSRPTQPS
>NZ_CP024890.1|WP_102031934.1|1688296_1688614_-|hypothetical-protein
MNLAKTNAPVDVGTLRNSHRQDPVRISGWIIDSAVAATARHALWVHEGTGPHPIRPRTKKVLSWKGPGGRVFARSVMHPGTTARPWLLNAARVAAGAEGFSVTEA
>NZ_CP024890.1|WP_102030954.1|1688721_1688922_-|hypothetical-protein
MTLEEQITDCLLRLRRARTEHTRMLARGAAADRITEVADAVTLLDDRLDTLLSRVPRTPIEQAVPA
>NZ_CP024890.1|WP_102030955.1|1688918_1689323_-|hypothetical-protein
MAQVLIKGRIATVELGVGEEAVVEHTTRIEQLAELGYIRIIGSIAGTHNPPPAPVDLSPGVQAAADGEDPVDSDVEASAAESAAAGGEVPPRSGRGSGLTAWQQFLDHQDITYPADATRDDLVDLWDTHLQDQS
>NZ_CP024890.1|WP_102030956.1|1689334_1689862_-|hypothetical-protein
MNSHQRLLRLVAITLEELRAQFVDATPLGGKTNEPMFAPGAFYAADTYDYDGCAGQPVVNVVRIYPTAGRGGGPLDETATSMPCGTVWAAILQIGIVRCTSVMDERGNVGNPADIQKEALVLLDDAARLRAVWCNVIARADDEDISSAALVDAFEPEGPDGGLVGGRQPARFQLA
>NZ_CP024890.1|WP_102030957.1|1689858_1690653_-|hypothetical-protein
MRGCTVTCDWPVDRTCLPTIAALPDTPTPEQVAQFEADHLRMQAAVDSAVTVLWALTGRRFGVCPVVARPCPRRPDPITGYWTPGIGFMPILDAGVWRNVALTAGTCDPYGPNVIDLPGPVQEITTVTVDGVVIAPDSYELHGDRLYRAGGEPWPGQDLSLPPGAAGTWSAEYLRGTPPPAGAAHAVGQLAVEFWNACSGGKCQLPRRVTSISRQGVTVQKVDPTDLISAGQTGIPEVDLWVYALNPNKLAAPPRVISPDARPR
>NZ_CP024890.1|WP_145961923.1|1690825_1691302_-|hypothetical-protein
MTTEDTTTAQAHTGSGTPPELMQTADWFTAPDYTLQRITNLVDRAGHDLMTVKLLVPGATITGTVAPADSFYDWVVEQQTKGTAEFDDGVSEETEQVLDFLFGQPAAELRAFREADEPSPPELVRYIHLRDAQVRIGQSLTDVGFIRVLLSQVSSWTI
>NZ_CP024890.1|WP_102030959.1|1691399_1691813_-|hypothetical-protein
MRIAVYVLHTLALILQLAGAVLVVLDVRQSQRNTAAFKNRLDEAEEMKQNHIQLLAAQSRRSIPGPIGGRINLPTIPVQAHGLLADQLGPSGAAERKALTQFVQDQFAISKRRRWSGVGLLFAGAIIGYTANMLSVS
>NZ_CP024890.1|WP_145961924.1|1692315_1693074_+|hypothetical-protein
MVPSAGSEELRDGPTLNLGKYLTADYQDRLLPQTVSVISLHAQQETVQVYLTNGPSWPTIIISALSAIVAAATLIVAVITARQARADRDKEVQARKEAERKLDEAQELAAAQQLAREHAIGVAIESAWVGLLSGDHHRDVSCTITNHTGGTISNLEIYVRYPIVDDIAGNRPMSRLARCSELRVSQSSTWSQQFYVWVDKIDSNTPPPAIVYFTDYLGNRWSRDTSNVTSLVKHAPVVPNGAPPDTGPPPSE

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024890_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_2

1685366-1685572

Orphan

Consensus_repeat	Method
CTCGACGTCGACCATCACCTTCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP024890_2

>merge|NZ_CP024890|2|1685366-1685572|CRISPRCasFinder
GTCGGCGAGGACCTTCACTTTCACCGGCGGCGGTTGCGGCGGCGCGAAGTTGAAGAACCCGGAGCCGTCCGGCTCGACCATCACCTTCACCTTCGGCGGCACGTCGAGCTTGAACCCGGCGGTCTGCTCGACGTCGACCATCACCTTCGTCTTCGGCGGGATGTCGAGTTTGAAGGGGGTGGCCTCGACGTCGACCATCACCTTGGC

>NZ_CP024890|2|2|1685366-1685572|CRISPRCasFinder
GTCGGCGAGGACCTTCACTTTCA	CCGGCGGCGGTTGCGGCGGCGCGAAGTTGAAGAACCCGGAGCC
GTCCGGCTCGACCATCACCTTCA	CCTTCGGCGGCACGTCGAGCTTGAACCCGGCGGTCTG
CTCGACGTCGACCATCACCTTCG	TCTTCGGCGGGATGTCGAGTTTGAAGGGGGTGGC
CTCGACGTCGACCATCACCTTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_102030945.1\|1678369_1678804_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030959.1\|1691399_1691813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030957.1\|1689858_1690653_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030952.1\|1687516_1687735_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030944.1\|1677641_1678052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961923.1\|1690825_1691302_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030956.1\|1689334_1689862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_190242373.1\|1678803_1680060_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030949.1\|1681855_1683187_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030950.1\|1683190_1684477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030954.1\|1688721_1688922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961921.1\|1680056_1680674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030948.1\|1681373_1681859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030947.1\|1680698_1681337_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_190242372.1\|1678229_1678367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961924.1\|1692315_1693074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_145961922.1\|1687782_1688259_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030943.1\|1676375_1677374_+\|DUF2510-domain-containing-protein	unknown	unknown	gnl\|CDD\|378480
NZ_CP024890.1\|WP_102031934.1\|1688296_1688614_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_102030955.1\|1688918_1689323_-\|hypothetical-protein	unknown	unknown	unknown

>NZ_CP024890.1|WP_102030950.1|1683190_1684477_-|hypothetical-protein
MAYRGLLFYGDTELINSRRTVAHILNGVRPLSLEVRHDDSWPHTARLLAHAPYVMPDEAPWHTPGDPDSLEFAGVWPMSVDGLDTSTLSREIVEGLGDGATTGVTRFGSKQITITALLVASSAAGAEFGLRWLTERLADASDVGAGTSLRFLSAAPELDPDLTGVATRAAMAGRWRTLYQVVTTAPPTVTGRFGFTRGQDTQASVFAVSWTMTALIPHVFHDPVVAIADSSLTGISTSTPTWTVAVDGECDGGCTDTGAAVLVDPEAAAAARVVRELTTVGSSGVCVPLESKRIAQAVPADPGRAARPDVVRVAVTTGAQVARGLRLQIVPGTGIEAWELAERCGALTEIGISYIPAGSTLTLDGATGTAWCDTPEGRMDAAAVVRGSGGAPWRFPLLDDIGSYGVLLDTPASLTELTVDAWTIARES
>NZ_CP024890.1|WP_102030949.1|1681855_1683187_-|hypothetical-protein
MSGLLGAASQRVTLTDYAGVLLAEIPASDTARVEWTRESRSVSVASTAVVATDQVARNVEPWVHRLNVWRGEQLAWTGPVIRTAAVGTKLTVAAADPGVWFERRKIKRGRLFSNTDLSIIAAQIIEDAFEGDDPDHIVDRMIVAPTGVFSSVTITPNTRYVSEQLADLADLGLVWQFVAGVLIVGPAVEQIELASPLGDEHFSEPVTVIKDGSKTATSVTVLGTSSSATVGVDPSEDPGFGRIERIVKADTADSVQACTVAALDELNRSKVTPRSVTVSDAARLSSSAPVQLGDLMPGVRIPIATTSTGIDLGSVMRLQTVRAIAQSGTESIMITVEDAPPPRSEMEIAEIAPTSSSPYTIVTSGGPIVCQQVWEPTGGFIGALLGWGKWVEKCTKDGKPVTRSGKEEVDTLPATKRYSYTLYVSVGTRPDFYINWELRKVES
>NZ_CP024890.1|WP_102030948.1|1681373_1681859_-|hypothetical-protein
MTEPIDAAPIDAALTAPAPAAGSGVTDQDAKTLEDMANRLGKLERSTVVRINEWALTQEYETVPLNGLTAGSDPQPQVVLKATNVTTGEGEILVPPAATQEWIAYIEALIEQKYAALSSSLSSLASRVSSLESRMSTAEDDIDDVESDVRGVERDVRSCCP
>NZ_CP024890.1|WP_102030947.1|1680698_1681337_-|hypothetical-protein
MVNVCTSEQFTEDGGILGLSPFAFAAPVAQATATSTGDGTITAHPGAGGRALIDASLHWANTYPCPVRVQAILRKQRRALSATASNIVVVRDRATTLVRTDAPGVPIAAVDPDPTAVFDSEWGGGNIVGAAATGDATPRVEVNRFAPQQTVLLPMVSVGAGESISVRFKARMYMPYGAGATGTFHPSTDANDVNSIAVLGTSIEFVAYPTAL
>NZ_CP024890.1|WP_145961921.1|1680056_1680674_-|hypothetical-protein
MICSSRQFTHSAAGVMGLSTHALPRQVAVVQSDSGGDGELKYPDDQGRVLVDQELHWANTYPCPVRVLPVIKRRSRLLHTTGSVLLVVRERLTWFVGQDREQRVQAADPDPTAVFDSEWGGGDTVGSATNGSAVPRTYSWMLDPETVHLLPFVTVPQDRSISLRLRVAAWFRHYVADNAEADINEVWVRGNTLSLLAFPTPEEMT
>NZ_CP024890.1|WP_190242373.1|1678803_1680060_-|hypothetical-protein
MSAPIGGTPVKVRGLISLAWLQRGDTTTIVWDATAVELVNAGYLEILEVLPVDPGEPAPTVAQLQAAVVAAEQARDEAVAARDQVVVDQTALADAVADAEGARDAALGHAGTAQTAAGEAQAWAAAAEAVVIDQIPNASASTKGGIRLTGDLGGTWDVPTVPGLTGKQSISDRNQPNGYAGLDGSGLVPAVLLPSYVDDVLEYANLVGFPATGSVGKIYVALDTGRIYRWSGSAYVEISASPGSTDAVPEGATNKYFTDARAQAAAAAAIAAKYTKPASGIPAADLAAAVQTSLGKADTAIQPGSQPFDVTFVAQSGTRKTGAGDVPLGVKLKRAVAFSEVTFRCETADGSGNLVVEVRKNGSATGMPTATIAAASQVAGVTVTGPWSFADGDVLTVHVTAVGTTPGKGLVADFEGVT
>NZ_CP024890.1|WP_102030945.1|1678369_1678804_-|hypothetical-protein
MPHLFVRGGSALAAMKAQRTTTQNLAAASVYEKIVGLAAVTGTHPETVLVDDEFAANGSGSWMLDVAITHGNTSSGTGVRLLRKPVGGSYSVLQTWSTSGTFHTGVSGSVTVPIERGDLVRVEAMHANGFTRDITSTVLTATLA
>NZ_CP024890.1|WP_190242372.1|1678229_1678367_+|hypothetical-protein
MQSRWKWNEHEPLFGDAGSTGSTAVLLTITTIVLVLGGLLIYTGR
>NZ_CP024890.1|WP_102030944.1|1677641_1678052_-|hypothetical-protein
MTLWHYTDRNRHARIGANGLLLPPRLTASRTSRMWTLPDWAQLRLDLIWLTDLDYPMREALGLTMHAIANDRTEIRYRVTQPAAKPQPIAWMKFRRHLDPRLVEDLELAPGAMPAHWYVATAPVRVQFDPLPALVH
>NZ_CP024890.1|WP_102030943.1|1676375_1677374_+|DUF2510-domain-containing-protein
MHPPAGWHPDPYNPALERWWDGQKWTDQTRTRGQSFPTPTTPVGSRVIPPRPRPQRTGSGSKKKWPWAAGAVALLVLLGSCIGDDESSDSPSRASTPTSTPTTKDLNTAPILTGIITEVDSPHVRVDVGVKYPLKIMLAHVGPGNCSGMSAAYGKRLVESLPVGASVTLVRMPDDAASTKMGDTAFIHLAEPGKTATETPYGRSVNETIVASGDGVFLPTIEHYRDSLPVEAQIPALMVEVPQQAEAYANALIAADVAAWDQRLGGVAACRAAQEQRDREHDEYMREHYGPDLLPDTEDDPDRNVNLPNVDLPSSGGSSGGGGGFCRHSRFC
>NZ_CP024890.1|WP_102030952.1|1687516_1687735_-|hypothetical-protein
MVLAGIHDPLRMLGFHQLLDVVEQLILETMTPEERQKYMRQMYPPPPMPDPDTETPPPGWSRDDEMAAFTDG
>NZ_CP024890.1|WP_145961922.1|1687782_1688259_-|hypothetical-protein
MTTTPENGIELERELAKISAEREALEKREAELAARTVGDTPPADTHPDPDSADDGDDEEEAPPWPHDTVEFAGETWEVRYPTTDAALVWNMQVSKHAPASVRNDAPMVFLSKHMSEKSLARMLERLADPDDSDFGFDKLDQLLTTLFTGETSRPTQPS
>NZ_CP024890.1|WP_102031934.1|1688296_1688614_-|hypothetical-protein
MNLAKTNAPVDVGTLRNSHRQDPVRISGWIIDSAVAATARHALWVHEGTGPHPIRPRTKKVLSWKGPGGRVFARSVMHPGTTARPWLLNAARVAAGAEGFSVTEA
>NZ_CP024890.1|WP_102030954.1|1688721_1688922_-|hypothetical-protein
MTLEEQITDCLLRLRRARTEHTRMLARGAAADRITEVADAVTLLDDRLDTLLSRVPRTPIEQAVPA
>NZ_CP024890.1|WP_102030955.1|1688918_1689323_-|hypothetical-protein
MAQVLIKGRIATVELGVGEEAVVEHTTRIEQLAELGYIRIIGSIAGTHNPPPAPVDLSPGVQAAADGEDPVDSDVEASAAESAAAGGEVPPRSGRGSGLTAWQQFLDHQDITYPADATRDDLVDLWDTHLQDQS
>NZ_CP024890.1|WP_102030956.1|1689334_1689862_-|hypothetical-protein
MNSHQRLLRLVAITLEELRAQFVDATPLGGKTNEPMFAPGAFYAADTYDYDGCAGQPVVNVVRIYPTAGRGGGPLDETATSMPCGTVWAAILQIGIVRCTSVMDERGNVGNPADIQKEALVLLDDAARLRAVWCNVIARADDEDISSAALVDAFEPEGPDGGLVGGRQPARFQLA
>NZ_CP024890.1|WP_102030957.1|1689858_1690653_-|hypothetical-protein
MRGCTVTCDWPVDRTCLPTIAALPDTPTPEQVAQFEADHLRMQAAVDSAVTVLWALTGRRFGVCPVVARPCPRRPDPITGYWTPGIGFMPILDAGVWRNVALTAGTCDPYGPNVIDLPGPVQEITTVTVDGVVIAPDSYELHGDRLYRAGGEPWPGQDLSLPPGAAGTWSAEYLRGTPPPAGAAHAVGQLAVEFWNACSGGKCQLPRRVTSISRQGVTVQKVDPTDLISAGQTGIPEVDLWVYALNPNKLAAPPRVISPDARPR
>NZ_CP024890.1|WP_145961923.1|1690825_1691302_-|hypothetical-protein
MTTEDTTTAQAHTGSGTPPELMQTADWFTAPDYTLQRITNLVDRAGHDLMTVKLLVPGATITGTVAPADSFYDWVVEQQTKGTAEFDDGVSEETEQVLDFLFGQPAAELRAFREADEPSPPELVRYIHLRDAQVRIGQSLTDVGFIRVLLSQVSSWTI
>NZ_CP024890.1|WP_102030959.1|1691399_1691813_-|hypothetical-protein
MRIAVYVLHTLALILQLAGAVLVVLDVRQSQRNTAAFKNRLDEAEEMKQNHIQLLAAQSRRSIPGPIGGRINLPTIPVQAHGLLADQLGPSGAAERKALTQFVQDQFAISKRRRWSGVGLLFAGAIIGYTANMLSVS
>NZ_CP024890.1|WP_145961924.1|1692315_1693074_+|hypothetical-protein
MVPSAGSEELRDGPTLNLGKYLTADYQDRLLPQTVSVISLHAQQETVQVYLTNGPSWPTIIISALSAIVAAATLIVAVITARQARADRDKEVQARKEAERKLDEAQELAAAQQLAREHAIGVAIESAWVGLLSGDHHRDVSCTITNHTGGTISNLEIYVRYPIVDDIAGNRPMSRLARCSELRVSQSSTWSQQFYVWVDKIDSNTPPPAIVYFTDYLGNRWSRDTSNVTSLVKHAPVVPNGAPPDTGPPPSE

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Crispr_ID: NZ_CP024890_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_4

2549300-2549376

Orphan

Consensus_repeat	Method
CCGCCGAGTCCGCCGCCGCGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024890_4

>merge|NZ_CP024890|4|2549300-2549376|CRISPRCasFinder
CCGCCGAGTCCGCCGCCGCGATCGGCGCGCGCCACGTCGTCAAGGTCGTCTCCCCCGCCGAGTTCGCCGCCGCGATC

>NZ_CP024890|4|4|2549300-2549376|CRISPRCasFinder
CCGCCGAGTCCGCCGCCGCGATC	GGCGCGCGCCACGTCGTCAAGGTCGTCTCCC
CCGCCGAGTTCGCCGCCGCGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_010594344.1\|2545126_2546002_-\|cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl\|CDD\|378238
NZ_CP024890.1\|WP_010594341.1\|2546583_2547000_-\|cytochrome-c-oxidase-subunit-4	unknown	unknown	gnl\|CDD\|378833
NZ_CP024890.1\|WP_026137668.1\|2538950_2540024_-\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
NZ_CP024890.1\|WP_010594336.1\|2551938_2552604_+\|DUF3043-domain-containing-protein	unknown	unknown	gnl\|CDD\|378611
NZ_CP024890.1\|WP_010594345.1\|2543338_2544988_+\|cytochrome-bc-complex-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|379304
NZ_CP024890.1\|WP_026137665.1\|2556092_2557193_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP024890.1\|WP_048770970.1\|2540089_2540536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_010594347.1\|2541384_2542218_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224921
NZ_CP024890.1\|WP_010594332.1\|2554955_2556059_-\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
NZ_CP024890.1\|WP_040275257.1\|2552734_2552950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_108754921.1\|2547031_2548096_-\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224537
NZ_CP024890.1\|WP_010594338.1\|2550357_2551329_-\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|238917
NZ_CP024890.1\|WP_040275253.1\|2559033_2560791_+\|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase	unknown	unknown	gnl\|CDD\|200219
NZ_CP024890.1\|WP_040275256.1\|2553084_2554188_+\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234636
NZ_CP024890.1\|WP_003934124.1\|2538591_2538867_+\|Lrp/AsnC-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366431
NZ_CP024890.1\|WP_040275255.1\|2557267_2558776_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP024890.1\|WP_010594348.1\|2540673_2541285_+\|heme-copper-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|224758
NZ_CP024890.1\|WP_040275260.1\|2542214_2543342_+\|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|223795
NZ_CP024890.1\|WP_010594337.1\|2551442_2551793_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|223393
NZ_CP024890.1\|WP_010594333.1\|2554187_2554940_+\|adenosylcobinamide-GDP-ribazoletransferase	unknown	unknown	gnl\|CDD\|234697

Protein	Function_ID	Function_description	E-value
NZ_CP024890.1\|WP_010594344.1\|2545126_2546002_-\|cytochrome-c-oxidase-assembly-protein	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	2.47931e-51
NZ_CP024890.1\|WP_010594341.1\|2546583_2547000_-\|cytochrome-c-oxidase-subunit-4	gnl\|CDD\|378833	pfam12270, Cyt_c_ox_IV, Cytochrome c oxidase subunit IV. This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex.	1.02587e-56
NZ_CP024890.1\|WP_026137668.1\|2538950_2540024_-\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	1.17326e-167
NZ_CP024890.1\|WP_010594336.1\|2551938_2552604_+\|DUF3043-domain-containing-protein	gnl\|CDD\|378611	pfam11241, DUF3043, Protein of unknown function (DUF3043). Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.	1.51382e-67
NZ_CP024890.1\|WP_010594345.1\|2543338_2544988_+\|cytochrome-bc-complex-cytochrome-b-subunit	gnl\|CDD\|379304	pfam13631, Cytochrom_B_N_2, Cytochrome b(N-terminal)/b6/petB.	9.74875e-77
NZ_CP024890.1\|WP_026137665.1\|2556092_2557193_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP024890.1\|WP_010594347.1\|2541384_2542218_+\|c-type-cytochrome	gnl\|CDD\|224921	COG2010, CccA, Cytochrome c, mono- and diheme variants [Energy production and conversion].	1.00982e-13
NZ_CP024890.1\|WP_010594332.1\|2554955_2556059_-\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	0
NZ_CP024890.1\|WP_108754921.1\|2547031_2548096_-\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	1.7337e-28
NZ_CP024890.1\|WP_010594338.1\|2550357_2551329_-\|carbohydrate-kinase-family-protein	gnl\|CDD\|238917	cd01942, ribokinase_group_A, Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	2.8516e-71
NZ_CP024890.1\|WP_040275253.1\|2559033_2560791_+\|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase	gnl\|CDD\|200219	TIGR02927, putative_dihydrolipoamide_acyltransferase, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).	0
NZ_CP024890.1\|WP_040275256.1\|2553084_2554188_+\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl\|CDD\|234636	PRK00105, cobT, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Reviewed.	1.42317e-170
NZ_CP024890.1\|WP_003934124.1\|2538591_2538867_+\|Lrp/AsnC-ligand-binding-domain-containing-protein	gnl\|CDD\|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	1.13634e-10
NZ_CP024890.1\|WP_040275255.1\|2557267_2558776_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP024890.1\|WP_010594348.1\|2540673_2541285_+\|heme-copper-oxidase-subunit-III	gnl\|CDD\|224758	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].	6.69504e-54
NZ_CP024890.1\|WP_040275260.1\|2542214_2543342_+\|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	gnl\|CDD\|223795	COG0723, QcrA, Rieske Fe-S protein [Energy production and conversion].	1.22571e-26
NZ_CP024890.1\|WP_010594337.1\|2551442_2551793_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	4.89307e-47
NZ_CP024890.1\|WP_010594333.1\|2554187_2554940_+\|adenosylcobinamide-GDP-ribazoletransferase	gnl\|CDD\|234697	PRK00235, cobS, cobalamin synthase; Reviewed.	1.84729e-54

>NZ_CP024890.1|WP_108754921.1|2547031_2548096_-|cytochrome-c-oxidase-subunit-II
MNVAQGRILRRFGLAASLGIAALLLTGCSSEEVLRFGWPEGITPQAERMRELWTWSVVAALVMGVLVWGLTFWVVIFHRKKKDSPEFPRQTAYNVPLELLYTAVPFVIIAVLFYFTVVVQNYVLEKEDNPNVVVDVTAFQWNWKFGYRTIDLGEGTARYEGTDEIAQAAVAGDDEEHAGGEHEVPAPIHGQEAEDLSYLHYNKIETVGTSSEIPVLVLPTDRRIEFVLASSDVIHSFWVPEFLFKRDVNPNPLNNSSDPVFQISEIQEEGAFVGRCAEMCGTYHAMMNFEVRAVSPERFAEYIELRKPVEDGGQGLTNAQALERIGESPVATSTTPFKTDRTDRAASGVVTAGN
>NZ_CP024890.1|WP_010594341.1|2546583_2547000_-|cytochrome-c-oxidase-subunit-4
MKIEAKLFEVVTVFFVLVAIVYGVFTGLSRTGIEWAGLTAIVLSAGLTLIVGTYFRFVARRLDTRPEDYEEAEISDGAGDLGFFSAGSYWPILLAGAAAFAAIALAFFQPWLIVLAVVLILAAAAGLVFEYHVGPEKH
>NZ_CP024890.1|WP_010594344.1|2545126_2546002_-|cytochrome-c-oxidase-assembly-protein
MHDHSMLAPGSPGLLHLLVVVVAAAIAGTYLAASSRLRRRGDVWSRARDASFVAGCAIVAAATVPLPVPAFTGHMGVHLGVGMVGPVLLVLARPVTLALRAVQPGPARRALVSVAHSGPVAVLTAPPVAAVLDLGGLWLLYRTGLFAVMHHSPLLGAVVHLHVFAAGVLFAYAICQVDPVRHRYGLGSRAAVLFLAGTAHAILAESLYASPPPGHEVATSDLQAGALVMYYGGDLVEVALAVVLAVEWYRRTGRDRARSVRRDAAEGPHAPPRTGVGATPRGHRSADTPGR
>NZ_CP024890.1|WP_010594345.1|2543338_2544988_+|cytochrome-bc-complex-cytochrome-b-subunit
MSTATPSRAAHAAENIDSRYHPAAGLRRQINKVFPTHWSFLLGEIALYSFVILLISGVYLTLFFDPSLAHVVYDGAYTPLRGVTMSRAYETTLDISFEVRGGLFVRQIHHWAALMFAASIIVHLLRVFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALSGITISIPVIGTWMHWLIFGGDFPGMLIIPRLYVAHVLLLPGIILALIAAHLALVWYQKHTQFPGPGRTEQNVVGVRILPVFAVKSGAFFAITFAVLALMSGLLQINPVWNIGPYNPSQVSAGSQPDIYMMWTDGLARIWPAWEIYLFGRYTIPAVFWIAVIMGLVFAVLIAYPWIEKKFTKDDAHHNLLQRPRDVPVRTAIGAMALTFYAIATIMCINDIIAYKFDISLNAMTWIGRIGILLGPPLAYYLTYRFCLGLQRSDRQVLEHGIETGIVRRLPHGEYIEIHQPLGPVDEHGHPIPLEYQGAPVPKRMNKLGTAGKPGAGSWWSADPAEEATALEAAHHEAEVEQRAILSEYQERVHGTPTDGDGRTH
>NZ_CP024890.1|WP_040275260.1|2542214_2543342_+|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit
MSGGETPNKHTIENLDQMSRDDLVALGTNLDGVDVAFRKDRWPVGGTRAEKRAERNVAFWFGLAGVSALAFIAVFIFWPWEYQGPGEDNYALYNLYTPLLGLTLGLAILGVGVGAVQFTKKFIPEEVSIQDRHDGVSSEVDRRTIVAELSDSLDTSTLPRRKLIKRTALFGGGALGLGLIMPLGGLIKNPWAEGDDSPLWVSGWTPRYPGETIYLRRDTGRVNDIVLVRPEDLDAGGMETVFPFRESDRGDEQALLEGLRGIRNAVMLIRLRTEDTAKVIKRKGQESFNYGDYFAYSKICTHLGCPTSLYEQQTNRILCPCHQSQFNALEYGKPLFGPAARALPQLPITVNEEGFLVAGGDFIEALGPAFWERRP
>NZ_CP024890.1|WP_010594347.1|2541384_2542218_+|c-type-cytochrome
MPGQSAAASAKSRRQRKLRRRVTGALVLALGLLSAGFLASALTPAPQVATANEDQSALIREGKQLYETSCVTCHGANLQGVQDRGPSLIGVGEAAVYFQVSTGRMPMMRNEAQALRKTPKFDAAQTDALGAYIQANGGGPTLIRDENGEIAQSSLRGDDVARGSELFRQNCASCHNFTGRGGALSSGKFAPVLDPANEQQIYTAMLTGPQNMPKFSDRQLTLEEKQDIIAYVKASSETQSPGGYGLGGFGPASEGPTMWVVGIVAVVGAALWIGARS
>NZ_CP024890.1|WP_010594348.1|2540673_2541285_+|heme-copper-oxidase-subunit-III
MTSAVGTSGTAITQRVHSLNRPNLVSVGTIVWLSSELMFFAGLFAMYFVARAQADGNWPPEPVHLNLALAVPVTLVLIASSFTCQMGVFAAERGDVFGLRRWYLITLAMGTFFVLGQGFEYTQLVAEGVTISSMVWGSVFYITTGFHGLHVIGGLVAFVFLLVRTRVSKFTPAQATAAIVVSYYWHFVDIVWIALFATIYFIR
>NZ_CP024890.1|WP_048770970.1|2540089_2540536_-|hypothetical-protein
MSSGAGVWSRVRRVFSRRRPEPLDPSRPDLVVVVSSFDDVEACSTALERGSASEPAWSPEAEAVLRHHLELPADSVDQAIALCGRDGYAPAQPARPAGTGLEAVLLQRVQVLDALHCSQERSRMASLAQRLGGTALGWDALQPATGAD
>NZ_CP024890.1|WP_026137668.1|2538950_2540024_-|anthranilate-phosphoribosyltransferase
MNAGRQADAVARSWPAVLGALTAGRDLARAEAQWAMDEIMSDNATAAQIAAFGVALKMKGETPEELLGLADSMLAHARLVPVDDDVVDIVGTGGDRANTVNISTMASLVVAACGIRVVKHGNRAASSKSGGADVLEALGVHIDLGPEAVAESVAEAGIGFCFAPVYHPALRFAAAPRKQIGIPTVFNVLGPLTNPARPRAGLIGCAFPELIGTVAGVLAERGNSALVVRGDDGLDELTTSTTSTVYVVRDGHVSTVSLDPTDLGVARVPLEALRGGDATDNAVIARAVLAGEHGPVRDAVLLNAAGAIAAFRGFEGSLASALAAGMQTAAEALDSGAAAAVLARWAEVTTRLAAGSR
>NZ_CP024890.1|WP_003934124.1|2538591_2538867_+|Lrp/AsnC-ligand-binding-domain-containing-protein
MIHAIVLIHADAHRIPETAQAVADLAGVDKVYSCAGDIDLIALLRVRDHEEIAEVVTRGINKLEGVAKTATHIAFQSYSSADVEAGFSIGE
>NZ_CP024890.1|WP_010594338.1|2550357_2551329_-|carbohydrate-kinase-family-protein
MTIAVTGSIATDHLMRFPGRFAEQLVADQLSHISLSFLVDDLVVRRGGVGGNIAYAMGVLGGAPVLVGAVGADFAEYRAWLEGNGVDCSPVHVSQTAHTARFVCTTDEAMAQIASFYPGAMSEARDISLAGVTGAHGVDLVLIGANDPEAMARHTDECRQLGVPFAADPSQQLARLSGEEAARLIDGAAYLFTNEYEWGLLQQKTGLTEEQIRAMVGLRVTTLGGNGVEIVERDGRRTHVGVVPERAKVDPTGVGDAFRAGFLLGHRAGLTLERAAQLGSLVAVLVLETTGTQEWTFDRPDAVKRLTVAYGQAAADEIAAILP
>NZ_CP024890.1|WP_010594337.1|2551442_2551793_-|iron-sulfur-cluster-assembly-accessory-protein
MTVQDETATHGVTMTEAASAKAKALLDQEGRDDLSLRIAVQPGGCAGLRYQLFFDDRTLDGDLTRDFGGVVLAVDRMSAPYVEGASIDFVDTIEKQGFTIDNPNATGSCACGDSFN
>NZ_CP024890.1|WP_010594336.1|2551938_2552604_+|DUF3043-domain-containing-protein
MKLLRRGGSDESDNEDLGVSESVAAPQSEGGKGTTGKGRPTPKRREAEARRRGPVAPAPLTAKEARARRKAAKQSLSKDERKARAAERRAAAGERRTRMLAGEEKYLLPRDKGPVRAYVRDLVDSRRNLVGLFMPMALILIMTMFLGPVVQQYVTLAMFAMIVLMVIEGIYLGRLVNKKVRARFPDTTEGGFGLGWYAFVRASQIRKLRAPLPRVSPGDAV
>NZ_CP024890.1|WP_040275257.1|2552734_2552950_-|hypothetical-protein
MSQVVVIVLVLATLFAGLELARARSRPAPRWVTRAWWRCDHFRPHDPSPHGGDPSAGWVRTTIDARRSPQH
>NZ_CP024890.1|WP_040275256.1|2553084_2554188_+|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MSSESVSSADVVFPPVVAPDPEVRRRAEGRQRDLTKPAGSLGRLEELGCWVASCQGQVPPRPFARPRVVVFAGDHGVARGGVSAYPPEVTAQMVANFLAGGAAVNVLAGVAGAGVRVVDMAVDGDTDPAVSAHKVRRSSGAVDREDALTEQETLQAIAAGRTVADEEVDAGADLLVAGDMGIGNTTPATALIATLTGTEPVAAVGRGTGIDDAAWMRKVAAIRDAMRRARPHARNPVALLRTAGGADLAAMAGYLAQASVRRTPVVLDGVVVTAAALVAEELAPGARDWWVAGHRSTEPAHTLALRHLNLDPLVDLGMRLGEGSGAVAALPILHGAVAVLTNMATFAEAGVSTRDEDDAPVAGPRGD
>NZ_CP024890.1|WP_010594333.1|2554187_2554940_+|adenosylcobinamide-GDP-ribazoletransferase
MRGVALALSWLTVLPIRGPGHIDRSAAGAAIAAAPVAGLVLGLGTAGALWAAVAAGCAPLLAGLIGVGFLGLATRGMHLDGLCDTADGLGCYGPPERAREVMKSGGAGPFGVATLVLVLGAQAASFGALADARSWFAVVLAVTAGRVAVVLACRRGVAAAPGSGFGALVAGTQPLGVGVLWAVVAAVAAAWCVPGAWWTGPATVAVGLVAALLLVRHCVRRFGGLNGDALGAGLETTVTVVAAALSAAVG
>NZ_CP024890.1|WP_010594332.1|2554955_2556059_-|branched-chain-amino-acid-aminotransferase
MTGVLEFAHVPHPSPASAERRGEVLADPGFGRYFTDHMVTIDYTEGRGWHDATVQPYGPMQLDPAAMVLHYGQAIFEGLKVYRQPDGSIAAFRVYSNAERMRRSSRRLAMAELPDELFVRSIAELVDADHEWVPAAGGEESLYLRPFMFSTEAGLGVRPANQYRYVLIASPAGAYFPRGVKPVSVWISQEYVRAAPGGTGDAKFSGNYAASLLAQAQAVEQGCDQVVWLDAVERRYIEEMGGMNLCFIFGSGADAKLVTPELSGSLLPGITRDSLLTLAREAGLEVEERKISVQEWESEVADGRITEVFACGTAAVITPVGTVKSRDGEFTVGDGEPGKVTMALRDTLTGIQRGTFADTHGWLTTLR
>NZ_CP024890.1|WP_026137665.1|2556092_2557193_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MSDQPLLQGPIHAVHTELGATFAAFGGWQMPVSYAGTVAEHTAVRENVGLFDVSHLGKALVAGPGAADYVDATLTNDLRKIGPGKAQYTLCCTESGGVTDDLIVYYVSDEELFLVPNAANTAAVVEVLAAHAPEGVTVTNQHRDHGVFAVQGPNSEAVLQGLGLPTDLGYMSFVDARWNDLPVRVCRTGYTGERGFELVPRWADAESLFRALADAVRAAGGQAAGLGARDTLRTEMGYPLHGHELSEAISPLQARCGWAVGWSKPAFRGRAALVAEKESGPARRLWGVRALDRGVLRPGLKVLRDGTPVGETTSGTFSPTLKVGIALALLETAGDPAAGDEVTVDVRGRALRAQLVAPPFVPDHTK
>NZ_CP024890.1|WP_040275255.1|2557267_2558776_+|leucyl-aminopeptidase
MSALSPTLPELVLAGSVSKRADVLVVGLTAGDGGPEALLGDGLVDEDVLGGLLDAMQSVGAEGRAEEVTRIPAPAALPVTSVLAVGLGAADKLDAEQVRRSAGAAARALAGVPVVATTLSAVDLGATAEGFALGAYTFTEFRTTKSNAGDAQPPARIELLVSSPRAREAKAELARSVAVAEAVATARRFVDTPPSHLFPAEFAERAKALGTAAGLKVEVLDEKALEQQGYGGIVGVGKGSSRPPRLVRLSYSAKKRKAPKVALVGKGITFDTGGISIKPAAGMENMTSDMGGAAAVVATVVLAAKLGVAADVTATVPMAENMPSATAQRPGDVLTQYGGTTVEVINTDAEGRLILADAIVRACEDEPDYLIDTATLTGAQMVALGTRTPGVMGTDEFRDRVARLSQEVGENGWAMPLPAELRADLKSRVADLANVTPHRWGGMLAAGLYLKEFVAEGVQWAHIDIAGPAFNTGSPFGYVGKGGTGVPVRTLIAVIEDIANNG
>NZ_CP024890.1|WP_040275253.1|2559033_2560791_+|2-oxoglutarate-dehydrogenase,-E2-component,-dihydrolipoamide-succinyltransferase
MAFSVQMPALGESVTEGTVTRWLKQEGDTVEVDEPLLEVSTDKVDTEIPSPAAGVLVKIVAQEDETIEIGGELAVIGDSADDGGSSTAPTAAPSEEAAPEEQSTPEPEPEPEPEPAPASSGSDTGSAEGTPVTMPALGESVTEGTVTRWLKSVGDEVAVDEPLLEVSTDKVDTEIPSPVAGVLLEINADEDETVEVGGQLAVIGSGTPAAAPSKPEPKPEPKPEPKPEPEPEPAKQAAPEPAKQPAPEPAKQAAPAPAPAPAAAETPGGATPYVTPLVRKLAAEHDVDLSKVSGTGVGGRIRKQDVLAAAEAAKAPAAEAPKAPAAKAPAAAPATTAGVRPELAHLRGTTQKVNRIRQITAIKTRESLQTTAQLTQTFEVDVTKIAHLRSQAKATFAEREGVNLTFLPFFAKAVVEALKAHPNINASYDEDKKEITYHAAEHLGIAVDTEQGLLSPVIHNAGDLSLAGLARAIADIAKRARSGGLKPDELAGGTFTITNIGSQGALFDTPILVPPQAAMLGTGAIVKRPVVVTDEVGNESIGVRSMCYLPLTYDHRLIDGADAGRFLTTIKHRLEEAAFDADLGL

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Crispr_ID: NZ_CP024890_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_5

3143217-3143305

Orphan

Consensus_repeat	Method
CGGTCGTTGCCCGCGGCGAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024890_5

>merge|NZ_CP024890|5|3143217-3143305|CRISPRCasFinder
CGGTCGTTGCCCGCGGCGAGGGCGCGGTGCTCGGCGGTGTCGAGGAGGTCGAGGTCGCCCACCACGCGGTCGGTGCCCGCGGCGAGGGC

>NZ_CP024890|5|5|3143217-3143305|CRISPRCasFinder
CGGTCGTTGCCCGCGGCGAGGGC	GCGGTGCTCGGCGGTGTCGAGGAGGTCGAGGTCGCCCACCACG
CGGTCGGTGCCCGCGGCGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_010595609.1\|3131616_3132645_-\|esterase-family-protein	unknown	unknown	gnl\|CDD\|223700
NZ_CP024890.1\|WP_040272334.1\|3125082_3126747_-\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_CP024890.1\|WP_102031326.1\|3224203_3226165_-\|acetoacetate--CoA-ligase	unknown	unknown	gnl\|CDD\|235134
NZ_CP024890.1\|WP_010591909.1\|3227163_3228000_-\|CoA-ester-lyase	unknown	unknown	gnl\|CDD\|225184
NZ_CP024890.1\|WP_003938091.1\|3122962_3123646_-\|50S-ribosomal-protein-L4	unknown	unknown	gnl\|CDD\|235404
NZ_CP024890.1\|WP_017681445.1\|3129573_3130431_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130315
NZ_CP024890.1\|WP_102031325.1\|3202673_3223490_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP024890.1\|WP_102031327.1\|3226161_3227004_-\|CoA-ester-lyase	unknown	unknown	gnl\|CDD\|225184
NZ_CP024890.1\|WP_102031323.1\|3165376_3172777_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP024890.1\|WP_003938092.1\|3123642_3124296_-\|50S-ribosomal-protein-L3	unknown	unknown	gnl\|CDD\|234564
NZ_CP024890.1\|WP_003938093.1\|3124341_3124647_-\|30S-ribosomal-protein-S10	unknown	unknown	gnl\|CDD\|179076
NZ_CP024890.1\|WP_017682323.1\|3223778_3224126_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024890.1\|WP_017681446.1\|3130550_3131534_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224001
NZ_CP024890.1\|WP_102031321.1\|3146672_3152528_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP024890.1\|WP_145961971.1\|3153064_3165160_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|237108
NZ_CP024890.1\|WP_064066054.1\|3128714_3129566_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|272861
NZ_CP024890.1\|WP_172603621.1\|3127719_3128718_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP024890.1\|WP_010591910.1\|3227996_3228482_-\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239535
NZ_CP024890.1\|WP_026137935.1\|3126889_3127585_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP024890.1\|WP_102031324.1\|3172983_3202530_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237054

Protein	Function_ID	Function_description	E-value
NZ_CP024890.1\|WP_010595609.1\|3131616_3132645_-\|esterase-family-protein	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	7.6391e-52
NZ_CP024890.1\|WP_040272334.1\|3125082_3126747_-\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	5.92465e-103
NZ_CP024890.1\|WP_102031326.1\|3224203_3226165_-\|acetoacetate--CoA-ligase	gnl\|CDD\|235134	PRK03584, PRK03584, acetoacetate--CoA ligase.	0
NZ_CP024890.1\|WP_010591909.1\|3227163_3228000_-\|CoA-ester-lyase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	4.05037e-73
NZ_CP024890.1\|WP_003938091.1\|3122962_3123646_-\|50S-ribosomal-protein-L4	gnl\|CDD\|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	1.07137e-103
NZ_CP024890.1\|WP_017681445.1\|3129573_3130431_+\|ABC-transporter-permease	gnl\|CDD\|130315	TIGR01248, drrC, daunorubicin resistance protein C. The model describes daunorubicin resistance protein C in bacteria. This protein confers the function of daunorubicin resistance. The protein seems to share strong sequence similarity to UvrA proteins, which are involved in excision repair of DNA. Disruption of drrC gene showed increased sensitivity upon exposure to duanorubicin. However it failed to complement uvrA mutants to exposure to UV irradiation. The mechanism on how it confers duanomycin resistance is unclear, but has been suggested to be different from DrrA and DrrB which are antiporters. [Unclassified, Role category not yet assigned].	9.67349e-38
NZ_CP024890.1\|WP_102031325.1\|3202673_3223490_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP024890.1\|WP_102031327.1\|3226161_3227004_-\|CoA-ester-lyase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	1.46829e-73
NZ_CP024890.1\|WP_102031323.1\|3165376_3172777_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP024890.1\|WP_003938092.1\|3123642_3124296_-\|50S-ribosomal-protein-L3	gnl\|CDD\|234564	PRK00001, rplC, 50S ribosomal protein L3; Validated.	1.88312e-127
NZ_CP024890.1\|WP_003938093.1\|3124341_3124647_-\|30S-ribosomal-protein-S10	gnl\|CDD\|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	1.74965e-66
NZ_CP024890.1\|WP_017681446.1\|3130550_3131534_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	3.18571e-23
NZ_CP024890.1\|WP_102031321.1\|3146672_3152528_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP024890.1\|WP_145961971.1\|3153064_3165160_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP024890.1\|WP_064066054.1\|3128714_3129566_+\|ABC-transporter-permease	gnl\|CDD\|272861	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family. The seed members for this model are a paralogous family of Mycobacterium tuberculosis. Nearly all proteins scoring above the noise cutoff are from high-GC Gram-positive organisms. The members of this paralogous family of efflux proteins are all found in operons with ATP-binding chain partners. They are related to a putative daunorubicin resistance efflux protein of Streptomyces peucetius. This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.	5.6711e-25
NZ_CP024890.1\|WP_172603621.1\|3127719_3128718_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	9.24622e-130
NZ_CP024890.1\|WP_010591910.1\|3227996_3228482_-\|MaoC-family-dehydratase	gnl\|CDD\|239535	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.	1.1426e-72
NZ_CP024890.1\|WP_026137935.1\|3126889_3127585_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.68254e-42
NZ_CP024890.1\|WP_102031324.1\|3172983_3202530_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237054	PRK12316, PRK12316, peptide synthase; Provisional.	0

>NZ_CP024890.1|WP_010595609.1|3131616_3132645_-|esterase-family-protein
MGAAAISAAVLALPLFTGASFASADPVADTLQPITAVTSENGSYITKIENYGEQQLLVWVYSASMDEEILLDVWRPADTSKPAPTLYLLNGAGGGEDMATWRGRTDAIEFFKDKHVNVVSPVGGMFSYYTDWKNPDPQLGVNKWETFLTKEIPPLVDGALGTTGVNAVAGISTSGTSVFQLPMAAPGLYRGVAAYSGCAQTSDPIGQQFVKITVETWGSGDTENMWGPTNDPMWAEKDPYVNAEKLRGLEMYISNGSGLPGPHDTLTGPEIDGDAGVLANQIVVGGVIEAATNYCTHNLKNRLDSLGIPATYNFRESGTHSWGYWQDDLKDSWPVLQRALGI
>NZ_CP024890.1|WP_017681446.1|3130550_3131534_+|alpha/beta-fold-hydrolase
MKYARRITVAVMAAALAAAGPALPTAAAEPTTAAEPTSLPALLDSMGPSPAGANDLDCVPSPEHPRPVVLVHGTRMDMTGTWAVAAPQLADLGYCVYALNYGGIRSLVDPELMVWGVGSIEDSAKQVGEFVDAVLTHTGADQVDLVGHSQGGPVSRQYLRFEGGADPVDPDRNKVDKLVMLGATNHGTTFNGMQQLYSLFARLGLGNEEWATERLAQMVFGIAGRQQLIGSRVLARLNSGAETLPGIEYTSIATRQDTVATPPENAFLQPSENSVVHNVWLEDACPTSPADHLALLELPESLHLVKSALDPQYAETVPAPCTAPPTG
>NZ_CP024890.1|WP_017681445.1|3129573_3130431_+|ABC-transporter-permease
MTGTPDARPVDADGAAFAFLDPTRAHPERSSAALWEHSRIQCGRLLLRWARDPATMIQALLYPALTLLMFRVVLGNTVTAATGQPAIYGTVPMIILVGAMFGSVVSAVGLRTERQTGLLGRFYTLPIHRAAGLLGRMFAEAVRVLATTIVILAAGVALGFRFTQGYLAVLGILVIPILFGIGFALMVTVLATMSSKLPLVELVSIGCTLLMFFNSGFVPVMAYPRWLQPIVENQPMSCAIDAMKALAMGGPLAEPLVKTLLWFFLAVALFTVPAIRGYRRAAEEG
>NZ_CP024890.1|WP_064066054.1|3128714_3129566_+|ABC-transporter-permease
MTVHTKSISAQRVRHDAKITLPEKRVGSHRRADPTVLNQWSALTMRTVRTMARYGELVVAAITPVVFGLGFYLPLKFVMSLQGIDYAQYLMPIIVLQAMAFTAISAAQLSSGEAMTGLTSRLQTMPVFSAVPLLSRMSSAMLRSVVSLAGALLFGYAIGFRFSAGFAQAVLFCATALAISLVLALGADAIGTLSKSPEATAQALTLPQLILGMLSCGFVPEEGFPEWIRPFVRNQPISQFSFAMQDMAEGGVTWQVLFPTVAWCTGLALVFAPLAVWASTRRG
>NZ_CP024890.1|WP_172603621.1|3127719_3128718_+|ATP-binding-cassette-domain-containing-protein
MRYHDEAVLVDDLHKSFGDVHALKGITFSAPRGSVLGILGPNGAGKTTTVKILSTLLRPTSGRAVIAGHDVVADPAAVRRSIMMTGQYAALDETLSGRENLILFGRLMGLDRAAARQRADDLLREFDLVDAGKRAVRHYSGGMRRRVDIACGLVVRPEVVFLDEPTTGLDPRSRQGVWSLVGALKKQGITVLLTTQYLEEADLLSDNIIVIDRGTVVAEGTANQLKASTGGSYCEIVPADPKALPWVVHALGNLVPGDVRAELAASDSNDRVSIPAPHGPATLAEALRRLAPTRIELADIGLRRPSLDDVFLSLTGHTAGADAQEPTTGEPA
>NZ_CP024890.1|WP_026137935.1|3126889_3127585_+|GntR-family-transcriptional-regulator
MTSSAQSRASGGRPLRRRPQLSDDVAVHVRNLIMSGGVRPGDFIRLDETAAELGVSVTPVREALLTLRGEGLVELVPHRGYVVAPLSRGDIDDLFWLQGQIAEELARRAAAAITPETVAELSDLNERLAEAVRGGDGARIEDLEFAFHRTLNRVTGARKLSWFLLNATRYTPVHFYSSDPAWGAAAVASHRRLIDALGRADTDSAGEETRRHFTDGARRLVRHLDEIGVWS
>NZ_CP024890.1|WP_040272334.1|3125082_3126747_-|amidase
MSHRTSRRRFLGTAAGGVVGLGLLPGVRAEARPVSRLPDPATVPATDPAMLSAVEAASLLQSGQLHPRELLDAYLRRTRDHDGGVGAWIHLYPDLAYAAADAAATRLTAARTTGEPVSPVCGLPIALKDLFAVGGLPLTASSNVLRDNVAAGDSGVWRRLRDAGAVLLGHVHTDEFAIGVVTPQVANPWNPRYSPGGSSGGSAAAVAARFAPLSVGSDTGGSLRLPASACGVSTIKPTYGRVTSHGMIPLTWTRDHPGPIGHSLADASLLLGVLAGEETDDPVTAGGPGVPEGGYPLTPPAGATPLAGVRIGLPHGATDRLAPELRRLFDEFLATARALGAELVPVSMPHPPESLLAGDTAEMGAYHRQFADRIGEYRIDLAPLVSAAVASLALPVADYFSLEQDRLRYQHQYNAMFRDHELDVIALPGALDDGCPRDAFAGLSVLSGVAGDVQWANYTGAPAVSFPVGRSAVTGLPFGVQLGALPWQESGLISVGLALQEALPVWREVPTVAPAARELPVVTPTVPGPGPDPTNTLGAAAPVRTPATLSTGGL
>NZ_CP024890.1|WP_003938093.1|3124341_3124647_-|30S-ribosomal-protein-S10
MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ
>NZ_CP024890.1|WP_003938092.1|3123642_3124296_-|50S-ribosomal-protein-L3
MTNQIKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAYGAIDPRKVTKPVAGQFAKAGVTPRRHIVELRVDDTDGIEIGQELTAEVFEDGAFVDVTGTSKGKGFAGTMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLSVHKVDAENGLLLIKGAIPGRKGGVVIVKTAVKGGARA
>NZ_CP024890.1|WP_003938091.1|3122962_3123646_-|50S-ribosomal-protein-L4
MTSTETATKLTLDVKAPGGQTNGTVDLPAEIFDAPANIALLHQVVVAQLAAARQGTHATKTRGEVRGGGRKPYRQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARNERIHVITELVAGQAPSTKGARTFLAELTDRKNLLLVVGREDLAAWKSVQNLQNVHAIAPDQLNTYDVLYSDDVVFSVEALNAFIHGPAESAQAEKEESK
>NZ_CP024890.1|WP_102031321.1|3146672_3152528_-|non-ribosomal-peptide-synthetase
MSGPGMRTRTTDPEFGGDSKVVYPTVRGKLRASRRRTPTTMLPHLLSAAVERDPAAPALTAEGHTLTYREADAESSRLARLLIARGIGPEDRVAVLLTRSIRSVLAVWAVAKAGAAFVPVDPLYPADRVRYMLSDSDARLALTVVAHRGVVPEGFDTLVLDEPDTRRELDACPADPLTFVDRVRPLRPDHPAYVIYTSGSTGRPKGVVVTQAGLADFCAEQVERYRLTPAARTLHFASPSFDASVLELLLAVGSGSTMVVAPPSVYGGDDLAELLRRERVTHAFVTPAALASVDPTGLDDLETVVVGGEACPPDLVARWAPGRRFHNGYGPTETTIMTSISGPLAPGAPVTIGRPVRGVAARILDTRLRPVPAGTAGELYLTGSGLARGYHERPGLTATRFVAAPGGARRYRTGDLVRSPRSAREGITYLGRNDFQVKVRGFRIELGEIDAAFAAHPTVDFAATVGYRGATGDTRLVTYVHAAAGSAIDVAVLTAFVAERLPAHMIPSSVIALETIPLTPVGKLDRAALPEPEIASAPYRAPASAAEVAVAEAFGDVLGVQRVSVHDDFFDLGGNSLLATRVIGRIRAALGVTVSAADLFDATTVEALAARVAAAPTAARGLLPRRPRPDRIPLSPAQQRMWFLNRLDPDSAVFNIPLAVRLSGRLDVDAMRAAVRDVVARHETLRTVYPEVDGVGEQRILDVGDVPLDLGPEDATDSDAPARLAAFAGGRFDVTGEVPVRVRLFRLADHEHVLAVVLHHIAGDGSSLGPLVRDLVTAYTARSTGREPAWEPLPVQYADYTLWQLDALGDEDDPRSGTARQLAYWRRALDGIPEHLELATDRPRPPVVGHAGDRVSAHVDETTYDAISALARERGVTPFMVLHAVLAVLLARVSNTHDVVVGTPVAGRTAPELDGLIGMFVNMLALRTDVDAADSFATLLEQVRDTDLHAFAHADVPFERLVEVLDPVRSTARHPIFQVGFSYQNFAREALELPGLRITPVESDSYAARFDLHVTVVDHAVGGGPGGFDIEFGYATDLFDAPSVRRLLARYLRILRAVVDDPAAVVGDIDLHDSAELAEMMRAWEAEQADLSAGRTLVDLFDEQVAATPDAPALVFRGGTLTYRDFDARVNRLARHLVTQGVGPESTVALCIRRSVDLVVAMYAVAKAGGAYLPLDPDHPAARNRYVLDAAAPQCVLSTTADRVDALAGRRVLDVDRLDLGDLDPAPLADTDRRAPLRAANTAYVIYTSGSTGRPKGVAVPHEAIVNQIAWKRAHYDLGPDDAVLLKTAATFDLSVWEFWSALTCGARLVIAAHDGHRDPSYLNDLIRREKVTILHVVPSMLEALLEDSAGTLPGTLRRVLAIGEVLPAPTARRTLGASKADLVNLYGPTEAAVSVTAHAVTAPTHTSVPIGDPVPNTQTFVLDERMHPVPPGVAGELYLAGVQLARGYLGRPGLTAERFVANPFGAPGTRLYRTGDVVRWRIDGDDPGRGTLEYLERADFQVKVHGFRIELGEIEAALRAQPSVRDAAVAVHGGDRLVAFVVPAAGRIDVARLRAALAETLPSYMVPAGVVTLDALPLNPHGKLDRAALPEPVIAPRHHRPPRTPLETEVAAAYREVLGPAGDAGGFRVGLDDDFFDLGGTSLSAVRVIARLRERTNLPVSLQWMFLTPTVAALAARIEGSAGDPGDHTAGFDAVLTLRPGGAAEPVFCIHPVIGLSWSFAGLARHLDPERPLYGLQSPALSDDEPLPESIDAWAAGYVERIRRIQPAGPYHLVGWSLGGIIAHAAAVRLRADGHEVATLALLDAHPPGAPTETVPSAVTVADLLGAIGTDVGAGLDPAQFTPEQALELVADLPAPFDALTLPRLERIFEGVRRSYRLLAEHRPARFDGDLLFFAAGEDGTSAARAPQWRTHVAGTLAVESVQATHWKMTSQEALARIGPVLDRWIGGAR
>NZ_CP024890.1|WP_145961971.1|3153064_3165160_-|amino-acid-adenylation-domain-containing-protein
MEQRGDHPAVVCAAGGGSLSYRELDETSSRWARWLIGRGVGPGDAVAVAIPRSLESVLALWAVAKSGATFVPVDPRYPFERVEFMLADSGAALCLTVNDFSAAVPAGVEQVRLDDAATAGQVRQLPGHPISYADRTRALEGLDIAWMIYTSGSTGRPKGVAVTHAGIAGVISAERGHYEVDADARVLHVCSPSFDVSLLELLTGFSAGATVVVAPASVGGGADLADVLAAAAVTHVFITPAALSSVDPAGLTDLRVVVAAGEAFGPELVNRWSAPGRRFFNAYGPTEATILATSSAPLVTGEPITIGTPIPGVGAYVLDGRLRPVPPGVVGELYLAGAQVARGYHRRPGLTAERFVADPFGSDPGTRMYRTGDLVRRAADGPIEYLGRSDFQVKIRGFRVELGEIDAALTARPDIEFAATLGKVLPSGEAALVSYVLPAAGTRLEVPAVLAGLAETLPAHMVPALVTVLDAVPLTPVGKLDRAALPEPVFAQREYRAPRTPVEETVASVFAEVLGRERVGLDDSFLELGGNSLLATRLVARLGAALETRVPVPVVFAAPTVAALAAHLESGSLAAQSVPLTPRERPDHVPLSFAQQRMWFLNRFDPTSAADNIPVAIRLTGRLDVGALRESVYDIATRHEVLRTRYPERDGLPYQAIVPVAGYTPDWVSESVRPTDLADRIADAVATGFDVTAEVPFRVRLFRVADDEHVLVFVAHHISADGWSMAPLTRDLMTAYAARAAGGEPGWEPLPLQYADFALWQREALGSEGDAGSPLAAQARYWQRVLADLPEELHLPTDRARPPVQSFAGGRIAFAIDAPTHRRAAELARQNGSTLFMVLHTALAVFLARMSSSHDIAVGTAVAGRGDAALDEMVGMFVNTLVLRTRIDPGSGFADHLARVRDSDLEAFAHAEIPFERVVELLAPERSTARHPLFQVALALENLPPAGLELPGLSLAAVPFEVTTAKFDLSLTLREHTDLDGEPAGMSAELVFARDLFDDETVAGFARRFVRLLAGAVAEPAVPVGDLALLTGDEAARLTRVPDAAPGGARTLAEILTAAVSRNPEAPAVRYRDRTITYRELDESSSRLARELAARGIGPDDVVALAFPRSYEMVLGVWAVAKAGAAHLPVDPSYPVDRVRYMLADSGAAVCLTSTEYASALPGSAVRLELDDPEFARAVAARSAAGVPERVRPLSAQHAAYVIYTSGSTGQPKGVVVTHAGLDPLLETAVTLYGVTSRARFLHVCSPSFDPSVLEWMVAFSQGATLVVVPSTIVGGPELAELIRAERVSHTIITPAVLGTVDPSGLESLEAVSVGGDVTSPHLLARWAPGRKYFNGYGPTETTIISSFARLQPGRPVTVGRPVPGVSALVLDSRLRPVPTGVVGELYLAGTALARGYHRRSGLSAARFVANPFGTPGTRMYRTGDLVRWRGTGAVAELEYLGRGDSQVKLRGFRVELGEIDAALERHPSVAQAATVLHPDPHGGDRLVGYVVGAAGAVPDPAHLREFLAGKLPHHMVPGRVVVLDALPLTGGGKLDKRALPVPQPESTEYCAPATDDEQAVADVYGAVLGLERVGRADDFFALGGNSLLAMQVVARLDAALGVRVPVRTLFEAPTVSALAARMGDPIAVPSRTPLRRRQRPERIPLSLAQRRMWFFNRFDPDSAAFNIPLVLRLTGELDVPALQAALRDLLARHEALRTVFPDSDAGPFQVIVPVEDVPVDPAPQDVTEDELPSRIAALVSRGFDVTAAVPVRAALLRLTDRDHVLVVVVHHIAGDGGSRAPMARDLATAYLARRAGDEPAWEPLPVQYADYALWQQDVLGSEDDPDSLLSRQMHYWTTALAGLPDLLELPTDRPRPAVQTGRGASVDFTLDESSAARLDRLSRDHGVTFFMLVHAALAVLLARLSGTDDIPVGAQVAGRGEEALDDLVGMFGNTLVLRTRIDPDATFAEILAAVREVDLAAFGNPDVPLERLVEVLDPVRSTAHSALFQVLLVVHNFARSEIALPDLQIAPVGTPPGGAKLDLELHLTEMRDEQGRREGIAGSVVYACDLFDEGTVRTFAARLVSILEVAAADPGVAVGGIDLCTAEERARLDELNRTAAPLGDRSVLDAFTRQARRTPDATAVVFEDTALTYAQFASRVDRLARRLVACGVGPERLVGVHMSRSVEMMVGIYAVLRAGGGYVPLDPEHPAERTAYVLDTAEPVLVLTTTHDRGTLPGSAPVLVVDESDVAPTPVTEFADHERLAPPHEAHIAYVLYTSGSTGRPKGVAVTHGAVVNQMTWMRERYDFGVGDTALQKTPVTFDASVWELFFPLQVGARLVIAAPGGHRDPDYLARLSRQWAVGILEFVPTMLALFLADPDLELPATLRYLSVGGEALPAELAARFAERSDALLDNTYGPTEATVTATVLRCDGRRGDAGTVPIGHPIRNTTAYVLDGRLNPVPIGVPGELYLGGVQLARGYHGRPDLSAERFVAHPGGARMYRTGDRVRWLPDGTLEFLGRNDFQVKVRGLRIELGEIEAALLAQPEIAQAAVTVHDGTHGAQLTAYVVPADGAAVDGATVRAAVGRVLPRYMVPDVVTVLGTLPLTTSGKVDRRALPEPVPAVREFRPPATAVERTVASVIGEVLGAERLGLDDDFFALGGNSLIATRVVARLGAALHASVPVRVIFEASTIESLAAAVERRIGSGGSPALAARPRPERIPLSPAQQRMWFLSRFEATAAAYNIPMAVRLTGRLDRAALQSAIADVVARHEVLRTFYPEVDGVPVQQILPAGAGAPALDPTDVDEPALRAAVRSAAATRFDVTRSVPVLVRLFRLSPAEHVLLVVVHHIAADGYSVAPLVRDLAHAYSARQAGREPAWQPLPVQYADYTLWQRDLLGSETDPASRVSRQLAFWADELAGLPDQLPVPTTRPRPPVQSYRGDRVPVTIDADLHGRVAALAAATRTTPFTVVHAAFAVLLARLSGTEDVAVGTPVAGRGEAALDDLIGMFVNTLVFRTRVDPAASFTSLLAQAREKNLQALAHADVPFEQLVEALAPARSMARHPLFQVGLSFQNLGAVDFELPGLTAARVDVTGEIAQFDLHLIVGDSYAADGTPAGIGGHLSYATDLFDGHAAASVADRFVRILGELVSAPDRAVGDADLLVDGERQALLEAANDTRVDSPGGDRAGGDCAVGDCLPDLLRRQVRERPDEVALVGDGVQLTYGELGDRVARLARALVAVGVGPEVRVGLLIPGSVELVVAMYAVSAAGGAYVPLDPSLPAARLVRMVAAARPATVLVSAASAGVASEVVPEPVRVLDVSRVDLSQHSAAPVTDADRTAPLHPANLAYILFTSGSTGVPKGVAVDHGAVVNQLRWLHAEFEFGPGEVTVQRTVATFDLSVWEFWGATTCGGRLVVADPESRRDPDRLLALVEREAVTTLYLVPSLLSALISGAGGELPTSVRRVLSIGETLPGAVAGACRRSSRAELVNLYGPTEAAVSVTAHRVTAADADQVPIGVPEWNTRVYVLDRRLRPVPTGVTGELYLAGRQLARGYSGSPGVTADRFVADPFGAGGRLYRTGDLARWTAEGVLEHVGRGDSQVKLRGFRIELGDIEAALLRLPIVSAAVATVHQDAATGARIVAYVVAAQNESDFDATSLRSELADELPNYMVPASIVRLDRLPVGATGKVDRGALPVPMPARASYRAAATPVERAVAQVFADVLAADRVGSDDDFFVLGGSSLVAVRVTRELTRRLDRPIPLEWVFAHPAVADLAARIERSADEEPAASGGSDSALAVLLPLREGDEGRDPVFFVHPVIGLAWSFASLARYVEPGRPVYGLQSPALSGESDLPDSIASWAGRYVSEVRRVHPDGPFHLVGWSLGGVIAHEMAVQLQRAGLEVGSLVLLDSSLPDAVRSSVDPVSVAAVALNASHGGGPGGVEDGLEVLADDIDPDLSASVLTSIERSFDALEGHVPGRYEGRMLFVGAASQAGPDADSGRDWAPYVADEVHRHDLSVSHWEMTGPRACTRLGPLLAGWTSDGSCPECGCAAR
>NZ_CP024890.1|WP_102031323.1|3165376_3172777_-|non-ribosomal-peptide-synthetase
MGTYMRSSRHDGSPGESDPAIAPEPSAGRHRERPARSRRPAPARPQRGARARTQVALLPQLLASTVEERGDHPAVVTPGGTGLTYRELDARSSQLARVLIARGIGPGDVVAVAVPRSVESVLSVWAVAKSGATFLPVDPKYPAERVQHMVSDSGAAVGLTLAAFAGALPGSTQWTALDDPAVAADIASRPSHPVSYADRLRPLSELHPAWMIYTSGSTGLPKGVSVPHSGIGSLITAEREHYRVTADARVLHICSPSFDVSMLELLATFGAGATLVVSPPTIVGGADLSELLAAERVTHTFITPAALGSVDPRGLDDLRVVVVAGESFGPDLVERWAAPHRDFFNGYGPTEATILAVSSAALHPGEPIRIGTPIPGVGAYVLDTHLRPVPAGVTGELYLAGAQLALGYHARPGLTADRFVANPFADGGARMYRTGDLVRRDEGGAIEYLGRSDFQVKIRGYRIELTEIDAVLVRHPDVEFATTVGRPLPSGETALVSYVVPAGAAADLDTGALVEFAAGFLPDYMLPAAVVPIPEVPLNPVGKLDRAALPDPVFAVREYRAPQTPTEQAVADVFADVLGVERVGLDDSFLDLGGNSLVATRLVARLGAVLDTRVPVPLVFEAPTVQALADRLEAQAGSGALPLVARDRPEQVPLSLAQQRMWFLNRFAPESAVDNIPVAIRLAGHLDVDALQGAVADLVARHESLRTVYPEIDGDGYQVVLPAAEAVPDLTPVDVEIEDVPARVLELVGTGFDVTAAVPWRVALLRISAEEHVLVFVVHHISGDGFSMTPLTRDIVASYRARTRNEPNPLPPLSVQYADYALWQREVLGDEDDPESVLSRQLAYWRAQLADLPEELGLPADRPRPAAASNHGAALRFPIDEEVHAALAELARTHNASVFMVVHTALAVLLARLSGTDDIAVGTPVAGRGEAALDDVIGMFVNTLVLRTAVVPGESFADLLARVRGTDLEAFANADVPFERLVEVLDPPRSQARHPLFQVMLTFQNLPQSALELPDLRISGVEFDTAIAKFDLQVTVAEQVSDRGAPGGMTVELTYATDLFDAPTMRSFADRFTRILRGVATSAATPIGTLPFLGDAEAERILTEWSSLGPGARVPAEATLVDRFESVVRRSPDAPAVTFAGRTLTFAELDARANRLARRLVAAGAGPDELVAVALPRSADLIVALLAVLKSGAAYLPIDTTYPAERLRYMLEDSRPRCLLTDAGGVLPDLGLPRVHVEDDDPHAPSGPVTDAERIAPLRADNRAYVIYTSGSTGRPKGVAVTHRNVLTLFANAEPLFGFGSDDVWTLFHSYAFDFTVWELWGPLLYGGRLVVVDYLTSRSPEQFLELLRAERVTVLNQTPSAFLQLDEADRVASVERPDAGPLALRYVVFGGEALDLGRLEGWYGRRPVAPTLVNMYGITETTVHVSFRALDRGDARAGAASRIGRSLPGLRLRVLDRLLQPVPVGVPGEVYVSGDQLSRGYLGRPGLTAARFVADPFGSGRLYRTGDVARWNADGELEYAGRSDAQVQLRGFRIELGEVEAALVRADGVAQAVAVVRDDGLGDRLVAYVVPRAGEDLDVARVREQLGAFLTGYMVPDVVVVLDELPLTVNGKLDRRALPVPRATTTAGTRREPVTDAEHVVAQVFADVLGVEGAGADDSFFDLGGNSLIATRVIARVNESLGTALAIRELFEAPTVAELAARADAHAESVARPALTAGSRPDRVPLSLAQQRMWVLNQLDPASASYNIPLAIRLRGRLDTAALTAAVRDVIDRHESLRTLYPQDETGPYQRILDADAVVPAVVPVEAASEQEALAEVVALAAEGFDVSSQVPVRGRIVSVGADDHVLALVVHHISADGASLAPLARDLMTAYAARLSGDAPAWAPLEVQYADYALWQRRVLGDADDAQSPAGAQLAYWRSRLTGVPELLDLPTDRPRPPQPSLRGGTVAVQVDEQIRQRLDALALAHRASLFMVVHAALAVLLARLSGTHDIVVGTPVAGRGDRRLDDLVGMFVNTLALRTDVDPAASFAELLDRARAVDLEAFGHADVPFERVVDDVVAARSPARHPVFQTVLSFQNTEAARLELPDLTVEALDGGELAAKFDLQVTVDPREHPGGTAAGMHVGFTYAVDLFDAGTVATFAERFLTVLRAVAESPRAVVGDIDIRTETERSAPADIEPEPVAAPDRVERTVPQEWQVAVESDPEAPAFVADGAEVTYLELERRSSQWARYLIAQGVGPGDGVAVAAPAGPELVIALWAITKAGAAIVPAVSGSTAAQTPGLGLATHGADVRPSAAARWLYLDEPATVATVAALSARPVDYSERVRVLQPQHPALWVAGRVVDHGELVALARGGGAAGKLDYESRLLVCDGTAEQWRVFAILAAGIAGAVVVVPEPDADLAAVVADEWVTHAFVPSSQVEALNDAPAEDLRVVVVTDRDEVPAGSAAAGDEWATVAAVDPWSMRN
>NZ_CP024890.1|WP_102031324.1|3172983_3202530_-|non-ribosomal-peptide-synthetase
MAEGTSGKQALTIADLPRLLAGVVDREPDRVALAHGDTQLTYSRLQQEIATLDAAMGGVLGIEALVPVVLSNLAPGLLADGGLPAVLDGLLADAAAVLGDAAVAPAGPDLGTLVGRFDAQVAATPDAVALEFDGETLTYAEFDARVNRLARHLIGLGVGPDTRVGLSMRRSFDLLVGMYAVLEAGGAYVPLDPDHPADRIAYVLDIAEPVAVVTTARDRVDLPASVPVVLVDTLDLAAVSADPVRDDERLGSLTADDLAYVIFTSGSTGRPKGVAVEHRAIVANIAWRQAEYGLRGDDVVLQKTPFTFDVSVWEFFWPLQVGARLSIALPDGHRDPAYLAQTMIERRVTVAHFVPSMLAVYLAEPTAAAVTSLRYVFASGEALPAQTVARFHAISTAGLHNLYGPTEAAVDVTYYETHGDDTVVPIGAAVADTDLYVLDEGLRPVPQGVEGELYLAGIQLARGYLRRPDLTADRFVADPFGAPGDRMYRTGDLVKWNTDGLIEYVGRTDFQVKLRGLRIELGEIESALLDHPGVRQAVVVVHSDETLGDHLVGYLVTDGEPVDRTELAAAVRRRLPDYMVPSLFVELTEFPLNASGKLDRGALPEPDFSVLATEYRAPSTPTEETVVAAFESVLGVERLGVDDDFFALGGNSLSATRVVARINADHKVRIDVREFFDAPTAAQLATLVDAAMAAGDSHRPPLVPQVRPERVPLSLAQRRMWFLNRLDPGSAVNNITVVLRLSGALDVDALGAAVADVVTRHEVLRTVYPETEGVGYQQVLPTSDVNPALTPSAVSESEIVPTVAEIVSAGFDVTTEVPVRVRLLRVSDTEHVLVLVVHHIAADGFSMGPLTRDVMVAYDARTRHEAPAWEPLTVQYADYAIWQRQALGSEDDPQSVVTQQIEYWTRRLDGVPERLDLPTDRPRPAVAGNRAAVHAFTVGESVHRGLVRLAHETRTTPFMVVHAALAAVLSRLSGSADVTIGTPIAGRGEQELDDLIGMFVNTLVLRTEVEPGEPFTRLLARVRESDLAAFGHADVPFERLVEVLDPVRSQSHHPLFQVMLAFQNLEQTSLELGELAISPVTANREQSQYDLSFIFADTVDENGEPGGLACDLLYATDLFDEPTVATLVRRLLRVLETVATDPARAVGDMALLSAPERQALTSVHGAAAEAGGTLAEILALAARRDPAAVALRFDGRSVSYGDLDATSSRLARMLISRGVGPEDRVAVAVPRSIESVTALWAVVKAGAAFVPVDPTYPTERIAYMLSDSGAVLGIATAGTFATLPDSVPWLVLEEAIEAGAGLPAGPVADAERVRSLLPAHPAYVIYTSGTTGTPKGVVVAHAGVVNFCAEQVERYAVTADSRTLHFASPSFDASVLELLLAFGAGATMVVAPTSVYGGAELAGLLAGEAVTHAFVTPAALGSVDPEGLDCVRVVITGGEACSPGLVARWATILPDGSRRAFFNAYGPTESTVASNISDALLPGEPVVMGGPVRGMRVLVLDDRLQPVPVGVPGELYLAGIQVARGYLGRAGLTAERFVADPYATDGSRMYRTGDVVRWSGSPGDETTGVVEYVGRADDQVKIRGFRIELGEIEAALARCAGVAQAVATVRRDGQRGEQLVGYVVPEPGTELDGAAVKDSVAQFLTSYMVPHAVVVLNSIPLTPGGKLDRRALPEPEQEARVFRAPTTPVEEIVARVFADVLGVERVGLDDDFFELGGNSLVATQVISRLAAALGTAVPVRTLFEASAVASLAARLEQADSAGSRVPLVARPRPERVPLSLAQRRMWFLNRFEPDSAVNNIPLAIRLSGLLDRHALQVAVADVLARHESLRTVYPDADGVAYQQVLPTSRVIPDLSPIPASENELIAEVLTMASAGFDVSTQVPFRARLFEVSATEHVLVLVVHHIAADGFSMGPLTRDVVVAYSARATGGEPEWEPLPVQYADYALWQREILGSEDDPDSVVASQEAYWSGALAGLPDQLDLPSDRPRPASASNAGAVHEFSLGPELHAAIGRVARERNATPFMVVHAALSVLLARLSGTDDIAVGTPVAGRGEQELDDLVGMFVNTLVLRTRVEGGESFEDLLAQVRGTDLDAFAHADVPFERLVEVLDPARSTARHPLFQVMLSFQNQATGALELPGLTVSGLDFDAATARFDLQFSLAETTSETADSVGYAVGITYATDLFDASTVAEFAARFVRVLEEVVADPSVAVGDLEILEPGERSRVLEVWNDTGHAVPAVTLVGLFEEQVRRSPQAPAVTFDGVSLTYGEFAGRVRRLARHLVSVGVGPESLVGLAMRRSIDLLVGMYAVVEAGGGYVPLDPDQPAERNGYILEVASPVVVLTTTRDGFVVPGESSVRTLVLDELDVSGYSGAPVSDAERRAPLRGSNTAYVIFTSGSTGRPKGVAVSHAAIVNRLVWMQGRYGLTGADVVLQKTPFTFDVSVWEFFWPLQVGARLVVAAPDGHRDPAYLAALMAEQSVSVVHFVPSMLAVFVAEPTVADLPSLRYVFASGEALPGAVAARLRTLVPGAAVHNLYGPTEAAVDVTFHEVTDADVVSVPIGAPVWNTGVFVLDGRLHPVPVGVPGELYLAGVQLARGYVGRSDLTADRFVANPFGAAGERLYRTGDLVTWTAGGELEYLGRTDFQVKLRGLRIELGEIEAALVEHTEAAQAVALVRAEQLVAYVVPAAGAFDDAFARRTLEAHLPSYMVPSAFVVLAELPLNASGKLDRKALPEPVFEVKAFRAATTPVEEIVASVFAEVLGLERVGLDDDFFALGGNSLIATQVVSRIGAALDASVPLRVLFETSTVEAFAAEVGRQIGTGARRPLEAAPRPERVPLSLAQQRYWFLNQFDTSSAVDNIPFAVRLQGELDLAAMQAAVRDVIGRHEMLRTYYPDPDGGPHQIVLPVDDALPDLTPYDVTEDNLTEEIVAFMSTTFDVTRQVPVASRIFRITDTDYVLAFVVHHVSADGASMAPLARDVTIAYEARSRGETPGWEPLPVQYADYALWQRDVIGSEDDPDSVAAQQIEYWKRTLAGLPDQIDLPADRPRPPRQSFRGDSLHFTVDAELHRGLQDLARRHNATLFMVVHAALATLMGRLSGTEDVAIGTPIAGRGERVLDDLIGMFVNTLVFRTRVQSDVAFDEFLAQVRETDLGAFAHADVPFERLVEVLNPVRSTARNPLFQVGLSFQNLAQTKLELPGLTVSPTNFELELAKTDLQLTVFDRYDEDGTPARIDATFTCATDLFDKGTVAGFAERFVRVLEAVVADPSVALGDIEILDGAERVRVLEAWNETGHEVDASATLVDLFDEQVRRAPQAPALVFEGQALSYGEFDARVNRLARHLISVGVGPESTVALAMRRSVELLVGMYAVAKAGGAYVPLDPDQPAERTGYVLEVAAPVVVLTTGRDGFEVPGEGSVRTLAIDTADLSALSGAPVTDAERRAPLRASNTAYVIFTSGSTGRPKGVAVPHGAVVNQLVWKRAEYALGADDAVLLKTAATFDLSVWEFWSALVCGGRVVIAAPDGHRDPRYLAGLMAEQSVTTLHVVPSMLEALLVETGGSLANSLRQVLAIGEALPAATAGRFLAHNAARLDNLYGPTEAAVSVTFHEVDDAAGVSVPIGVPEWNSRVFVLDGRLRPVPVGVPGELYLAGAQLARGYHGRADLTAERFVASPFGAGERLYRTGDLVRWDAAGRLEYVGRTDFQVKVRGFRIELGEIEAALRGLGSIRDVAVIARDDDRGGAQLVAYVVPAGSAEIDAAQLKSSLAQQLPSYMVPAAFVVLEALPLNVNGKLDRKALPAPVFEAREFRAPTTVTEEAVARVFAEVLGLEQVGLDDDFFALGGNSLLATQVASRLGAALDVRVPIRALFESPTVEALAVSVQHQSADARRPLEARPRPERIPLSLAQQRMWFLNRFDTDTAAYNVPMAIRLTGTLDVAALQAAVGDLVARHEILRTYYPETADGPIQVVVPAAQAEQDLTPVPVAENEILAAVHELGSTTFDVTTEVPLRLRMFRLADNDHVLALVVHHISADGSSAGPLTRDLMQAYIARSQGEFPAWAPLPVQYADYALWQREVLGSEDDPESIAAKQVAYWKKALAGLPDQLDLPTDRPRPAVQSFAGARTGFAVDPELHARLIELARRSNTTLFMVMHTALAVFLARMSDTDDIAIGTPIAGRDERALDDLIGMFVNTLVFRTQVRPDAAFEELLAQAREADLGAFANADVPFERLVEVLNPVRSTARHPLFQVGLSFQNVAQSRLELPGLTIANVDADMEISQFDLHLIVTDRHAEDGAAAGVTGFFTYATDLFDESTVAGFARRFLWLLESVVADPALPVGDVPLLDDTERLRVLEGWNDTGHAVDTSATLADLFDAQVHRTPDAPALFFAGETLTYGEFDARVNRLARHLISTGVGPESTVALAMRRSTELLVGMYAVTKAGGVYVPLDPDQPAERTGYILDAAAPVVVLTTERDAFELPGDSSVPHLAIDTADLAHYTGDPVTDAERRAPLRASNTAYVIFTSGSTGRPKGVAVPHAAIVNQLLWKREHFGLGSQDAALLKTAATFDLSVWEFWSALVSGGRLVIATPDGHRDPGYLNTLMAEQAVTTLHVVPSMLEALLVDSDGVLPRSLRRVLAIGEALPAATAQRFLQHNTAQLVNLYGPTEAAVSITAGEVADVSGASVSIGVPEWNSRVYVLDGRLHPVPVGVSGELYLAGAQLARGYHGRADLTAERFVASPFGDGERLYRTGDLVRWDSAGRLEYLGRSDFQVKVRGFRIELGEIEAALRGADDVRDVAVIAREDDRTGTQLVAYLVPEAGAVLDLAHVKSGLAGALPSYMVPAAFVVLEALPLNVNGKLDRRALPEPVFEAREFRAPSTPVEEIVAGVFADVLGLTRVGVDDDFFELGGNSLLATQVVSRIGAALDAKIPVRAVFEATTAGALAVAVEQHAGGGGRPPLVPQPRPDRVPLSLAQQRMWFLNRFDTESAANNIPVAVRLTGTLDVDAMRAAVRDVVARHEVLRTVYPESDGHAYQVVLPVAEAAPDLTPEPVSEADLVARVTEVVSAGFDVTDEIPLRARLFRVADDDHVLVFVAHHISADGWSMAPLTRDVMIAYVARAAGHEPNRAPLPVQYADFALWQRQVLGAEDDPDSLVSAQADYWKRTLAGLPDELNLPADRPRPSVQAFEGGKIEFRIDAGTHRQAADLARRSGTTLFMVMHTALAVFLARMSAADDIAIGTPIAGRGEAELDEMVGMFVNTLVLRSHIDADAGFAEHLGRIRESDLEAFAHADLPFERLVEILNPERSTARHPLFQVAMSFENLPETGLELPDLSVSTVPFDVDSAKFDLALTLREHTAADGGPDGISAEFTYARSLFDADTVEGFAARFAHLLDAAVADPALPVGDLPLLEPHELERLTHVRGTDVVSGGTLADLLTAGASLDPDATAVRYEGRSITYRELDEDSSRLARLLVERGVGPENIVAVAFPRSYDMVRAVWAVAKAGAAHVPVDPSYPPERVRYMLSDSRAALGITGTAHRPGLPDDAEWLVVDEPGLASDVATRSAAPVTDADRVRPLRPQHPAYLIYTSGSTGRPKGVVVTHTGLGGLLDTIIDLYGLTSRSRFLHIMSPSFDPSVMEWIAAFSQGATLVVVPSTIIGGPDLADLFRTERPTHTIITPAVIGTVDPDGLDSLEVVVVGGEALPPELVNRWAPGRTLLNGYGPTEATVISTYAHVLPGDPITIGGPVRGTTALVLDSRLRPVPVGVAGELYLSGAALARGYHRRSVLTSERFVADPFAADGARMYRTGDMVRWRVMDDDRLELEFVGRSDFQVKVRGFRIELGEIDSALTSHESVEFAATLGRTTPSGGTVLVSYVLPKAGATVDTAALTEFVGRSLPAHMVPSAIVVLDKIPLTPVGKLDRDALPEPELEEREFRSASTDLEEIIAEVFAEVLRLDRVGVDESFFALGGDSIVSIQLVSRAKARGVVFTPRDVFERRSVAGLAEVATRTTAGEGPGGLKELPGGGVGEVPLTPIMREVLGWGGGFDRFSQSVAVTLPKDIDRDVLVRTVGAVVDHHDALRSILEHDADGAPALRVRAAGTVDADELVTRVEVPADIDAAALTAVASRELDAALDRLAPTEGRVLRFVWFDFGPGDRPGVLLVVAHHLVVDGVSWRILLPDLAVAWGQTAAGQDVALPAVGTSLRRWAHGLADAARAPERRAELELWRSVLDGPDPLLGARAFDPAVDVASTVQRLEVTVPAADTESLLTSVPALFHGSVNDGLIAALGLALTRWRRDRGIDATSALLKFEGHGREETVVPGADLSRTVGWLTSAHPVRVDLTGIDVDDAFAGGTAMGSAVKAVKEQLLAIPDRGMGYGLLRHLDPVGSQVLSGYTTQPQVSFNYLGRVSAADVPEELAAIGWVPTDALGGVDAALDADMPANAVVDINAIVSDGADGPQLAAGFAYPTGLLGPDDVESLAAYWVDALAALARYASEPGAGGLTPSDVPLVSVTQQDLEAWEARFPSATDVWPLSPLQSGLLFHALMDESSVDVYTIQAVLDLDGVVDPQRLRGAAQALLDRYPNLRTVFVNDAAGAAVQVVLSDVRVPWREADLSQLVADEGVRATVPFWREEQARRFAMDEAPLIRFVLASLGGGRYQLGVTVHHILVDGWSMPLLMQDMMMLYATRGDESPLPRARSYRSFLAWVAERDLDASRATWARVLDGFEEPTLLAPATDRRPGAEGADRVRLLLDDDRTAEIASAAARLGVTVNTLVQAAWGVLLGRSTGRDDVVFGATVSGRPADLPGVESMVGLFINTLPVRVTFDPQEPIERFLHRLQREQAELLEHHHLGLTEIQRVAGPAVAFDTLTVFESYPLDEKGLAEQAASIDGMSVTGVGTNDATHYPLSLFVHVGSGMELDLRYQRRLFDARQVETLLSRFVRVLETIAGQPALPVGDVELLDPAELEQILHGWNASDHALDDTELLLSRFGAQVRRTPDAVALAYEGAELTYAEFGARVNRLARHLISQGVGPESLVGLAIRRSFDLLVGMYAIVEAGGAWVPIDPDHPVDRVRHILDTADPVCIVTTARDEFTVPDGLTVDAVLVDELDLSAISDAPVTDRDRRAPLRPDNTAYAIFTSGSTGRPKGVAVTHRAIVNQTAWMLDEFEMTARDVYLQKTATTFDVSLWGFFMPLSVGAKLVVATPDGHRDPVYVADVIAREKVTITDFVPSMLTVFAAHVDRESCTTLRHIFVIGEALPPETIEGVRRISTAAIDNLYGPTEAAVSATFWQAPADGPVDVVPIGVPEWNVRVLVLDGRLRPVPVGVPGELYLAGVQLARGYVRRPDLTSDRFVANPFGAPGERMYRTGDLVTWNEVGELEYIGRTDFQVKFRGQRIELGEIETALLAHESVNQAAVLVVPTPTGDQLAGYVVPAPGREVDAGEVIEFVSRTLPSYMVPAAIVVLTEFPLNTSGKLDRRALPAPTFAAREFRAPTTPIEEIVAGIFAEVLGVERVGLDDDFFALGGNSLIATQLVARLGAALDSRVPVRVLFDASTVEALAAHVEQHAGSGGSVPLVAGPRPDRVPLSLAQQRMWFLNRFDPESAAYNLPVALRLSGRLNVAALQDAIRDVFTRHEVLRTAYPETEDGAVQVVLPVTAVVPDLTPVATSWDEVADRIRELAYTGFDVTSEAPIRVRLFTVGEDETIVAFVVHHISADGSSMGPLTRDLVTAYVARSTGNAPDWMPLPVQFADYALWQRRVLGDENDPASVAAKQVTYWKQALADLPDQLDLPTDRPRPAVQSFAGGKIDFTIDADLHRKLVELARGRGATLFMAVHAAFAVLLARLSGTEDIAIGTPIAGRGQRELDDLIGMFVNTLVFRTRVESGASFADLLDQARERDLQAFAHADVPFERLVEVLNPERSTARHPLFQVGLSFQNLATTSLELPGLTVSGVDADLQTSQFDLHLVVTDRYADDGAPEGITSVLTYATDLFDEPTVVVFAERFVRVLEAVVADPSVALGDIEILEAAERVRVLEAWNETGHEVDASATLVDLFDEQVRRAPQAPALVFEGATLSYGEFDARVNRLARHLISVGVGPESTVALAMRRSVELLVGMYAVAKAGGAYVPLDPDQPAERTGYVLEVAAPVVVLTTGRDGFEVPGQTIPMLSLDTLDLGELSGAPVADAERRAPLRASNTAYVIFTSGSTGRPKGVAVPHGAVVNQLVWKRAEYALGADDAVLLKTAATFDLSVWEFWSALVCGGRVVIAAPDGHRDPGYLNTLMAEQSVTTLHVVPSMLETLLVDGEDRLPASVRRVLAIGEALPAATAGRFLAHNAARLDNLYGPTEAAVSVTFHEVDDAAGVSVPIGVPEWNSRVFVLDGRLRPVPVGVSGELYLAGAQLARGYHGRADLTAERFVASPFGAGERLYRTGDLVRWDAAGRLEYVGRTDFQVKVRGFRIELGEIEAALRGLDDVRDVAVVVRDDDRVGPQVIAYVVPQPGVVLDVADVSTRLGRDLPSYMVPAAFVVLEALPLNVNGKLDRKALPAPVFEAREFRAPTTVTEEAVARVFAEVLGLEQVGLDDDFFALGGDSIVSIQLVSRAKARGVVFTPRDVFERKTVAGLAEIATLTGGAERTLTELPGGGIGDVPLTPVMRAALEASGDVDRLAVSTAVTLPAGVDADALAGAVGAVVDHHDALRAIVERDADGAVTLRVRATGTVDPETLLAQGEPAPGVPDDLQTRAERALAAAVERLDPAAGRMVQFVRIDDGRGETLLVVAHRFVADDTSRRILIADLAAAYDALAAGQPVVLPPVGTSLRRWAHGLVEAAGRTERRTELDRWRSILDTPDFPIGDRPLDPAVDVGATVEHVHTTVPAADAEALLVAVPERFHGTVRDGLVTALGLALVRWRRDRGIDETATLLELDGDGRDSTVVPGADLSRTVGCLTISFPFRAGFGGIDVDDAFSGGPAMGAAVKAVKEQLRALPDDGAGFGLLRYLDPDSAGDLSAPRPQVALHFGEPVASVEGGAWSLTAAPGDRTVRPAGTPVTTTVDVTATVSYGPDGRRLEAHFGFPAGVVERSEIEELAQHWHEALSALACHVRGPGAGGLTPSDVPLVPVAQHDLDVWQSRYPSVTDVWPLSPLQAGLHFHALMTEASVDVYTMQAVLELGGAVDPQRLRAAAQALLDRYPNLRTVFVTDSGDPVQLVLGDVEVQWRHEHLGDLAEDARDAELARVLRDEQVRRFDLGQAPLIRFLFVDVAEGRSLLAVTVHHILLDGWSMPVLMQDLMALYVTRGDVTALPAAHSYREFLEWLTEQDREASLEVWAKALAGVEEPTVLAPSVRRPDADAISSVHVVFDEERAAAVSALASSLGITVNTLVQAAWAVLLGRIVGRSDVTFGATVSGRPAELPGVESMVGLFINTLPVRVDTDDDETIAQLLRRVQAQQADLLGHHYLGLTEIQQRAGGRIGFDTLLVFESYPIDRAALSAAATDLDGMTVRDVRLDDATHYPLTLLTLAQSEIVFTFKYLERYFDESEVNVLSQRFVRVLEAFVADPQAVVGDIDLMDAAERAHLVAEAEPAAAPVTSTGRTLAAVLANVVEEDPEAPAVAVDGTEVPYRELDARSSRLARVLVARGVGAGDVVAVAVPRSVRSVVAQWAVAKTGAALLMVDPADPAATMPDPARVTLGLTVTGVTGLPAVPWLQLDDEELRAEQAAQAAHPVSYADRLRPVEPESPALVTATRTLTQAEVIDRIGELRERYGLTYESRSAAVGSPAAEGGVLEPLLVTATGATVVVVPEGADSGEALDAALYDEWVTHAHLTADALDTLEPGGLEDLAVVVVVDRAPDELLERWRAAHRVVVV
>NZ_CP024890.1|WP_102031325.1|3202673_3223490_-|non-ribosomal-peptide-synthetase
MDSLGVGGSGATNTNAANVPDGAFPLSPAQLGMWFAQHVDPSVPANIAQYVELVGDLDRGLLLDASARAALEMGSGFLRFLEVDAQPYQLVDPTLDASIGYVDLRDADDPREAAMEWMRADRSTPVDVLKDRLISATVLQIGERRYFWYNRVHHLALDGFGAATFMTRIAELYTAAVEGAEPSPNKASDVRTVYEAEIAYRNSPRFDTDREYWSTIVDGIDEPTSLAGRPAPPAPVSRIDSAALGARVEELVDHFTERENTSLATAVIAAFAAYMAQMTGRTDVVLSLPVAARTTAVLRRSGSMVSNVVPLRLEVAAGTTVRQLVASATAAVSGALRHQRYRHEDIVRDAGSAAGGRSTFFGPWVNIMLFDNEVRLGDMVGRINILSTGLIEDLGVNVYKSGGTRTHIDFESNPNLYGVQESRAHHARFVEFFDRFVAADPERRVWDLPLGTGAETARVLTEWNRTEHPVDHRTLLAEFEEQVARTPDATALVYEGESLTYAEFDARVNALARLLVARGVGPESLVGLSVRRSLELLVGMYAILEAGGAWVPIDPDHPADRTAYILDTARPVCVVTTARDRVDLPAGLDVVEIDRIDLTGLDTRPLTDADRLGPVRLDSTAYVIFTSGSTGRPKGVAVTHRAIDNQIRWMNDQYALSASDVYLQKTATTFDVSLWGFFMPLRVGATLVIATPDGHRDPMYVADRIAEHGVTVTDFVPSMLTVFVANARPGSCDTLRHVFVIGEALPAETAAAFAQLCPAQLHNLYGPTEAAVSITYHRATAEDVTTVPIGVPQWNSRVYVLDHRLRPVPPGRPGELYLAGVQLARGYLRRPDLTADRFLADPFGAPGDRMYRTGDLVLWCLGADGAGYLDYIGRTDFQVKFRGQRIELGEIEAVLLAAPEVSQAVVLVVPTATGDQLVGYLVAAPGHAIDTEALTEALGRALPSYMVPASLMVLDAFPLNTSGKLDRKALPEPVFNSARMFRAPRTAAERVVAETFSEVLGVAEVGLDDDFFELGGNSLVATQLVSRIGSAMDTQVPVRVLFESSTVVGLAARVARQSGSGARRPLVAGPRPDVLPLSTAQQRIWFLNRFDAGTAAYNLPFTVRLTGPLDPAALDAAFGDVVSRHETLRTVYPAVDGEPQQVILPVEHVDSRVPVLDITASELHDRVVALSQRGFDVAVDVPFRIALYRLADDEFVLAMVLHHIAADGSSFEPLVRDIVAAYAARAAGSEPGWSALPVQYADYALWQRDVLGLESDPNSISAQQIAYWTRELDGIPDQLDLPADRPRPAVATYRGDKRRFVISAETHRGLVEVARSHHASLFMVMHSAYAVLLSRLSGSDDIAVGSVVAGRGDRLLDDLIGMFVNTLVLRTRVDPGARFEELLDRVRDSDLSAFSNADVPFERLVEVLKPPRSTARHPLFQAALAVESPGTRDISFSGVRATAAEFDVPIAKFDLQLWLVERTDDEGRPAGVNAVFEYATDLFDADTVDVFGQRFVRILEAIVADAATPVGDIDLLAPEEEARLVSVRGPELHRAERPLVELLTAGVDLAPDTIAVRCGESALTYRELDEWSNRLARVLVDSGVGPETIVALAFPRSAEMVHCVWAVAKTGAAYVPIDPAHPVERIRHIVRDSGAVLGLTTAAHLPELPADFDWNALDADETRAAIERTSAAPLGDADRLAPLRLDHVAYMIYTSGSTGLPKGVAVTHHGLAALVQESVELYGVTERSRVLHVCAPSFDPSVLEWLMAGSSGAELVVTPANVLGGTELHDLIETYGVTHAVITPAVLGSVDPRDLDTLRVLNVGGDVSTADLVARWSPGRRYFNAYGPTETTIVTTRGELHPGEPITIGTPVAGVGALVLDARLHPVPVGVSGELYLTGDALARGYHRRPALTADRFVASPFGAPGERMYRTGDVVRWDDEGRLVYAGRTDFQVKVRGYRIELGEIDAAYLSHPAVDFATTIGHEMPSGQTTLVTYVHGEAGLDSEELTGYVAGFLPSYMVPSVCVVLDAVPLTPNGKVDRKALPEPVFEARAFRAPTTPIEEIVAGTFESVLGIDRVGLDDDFFELGGNSLVATQLVSRLGAALDTQVPVRLLFEASTVVALAARVEHRAGAGRRIPLVAQPRPDRIPLSLAQQRMWFLNRFEPESATYNLPFALRLSGELDITALQVAIMDVIDRHESLRTVYPEGPDGPMQVVTDAATAVPNLTPTSITEENLQQEISALASTGFDVTREVPVRAHLFEIDPTEHVLAIVMHHISADGWSMGPVARDVMAAYAARIEWERPAWPPLPVQYADYTLWQHELLGSESDPESLIADQLAYWRTTLAGLPDQLDLPSDRPRPARQSFRGGTERFVVSAEVHSALDDVARRHGTTLFMVVHAALSVLLARLSGTDDIAVGTPVAGRGEQELDNVVGMFVNTLVLRTQVDPDQPFTEQLARAREAALGAFAHADVPFERLVEVLNPARSTARHPLFQVMLAFQNLGSTHVELPRLVLETQAIDTSVAKFDLQLTLSESTDDDGGADGLVAEITYATDLFDASTVAGFAARFVRVLEEVVADPSVAVGDLEILEPGERSRVLEVWNDTGHAVPAVTLVGLFEEQVRRSPQAPAVTFDGVSLTYGEFAGRVRRLARHLVSVGVGPESLVGLAMRRSIDLLVGMYAVVEAGGGYVPLDPDQPAERNGYILEVAAPVVVLTTTRDGFVVPGESSVRTLVLDELDVSGYSGAPVSDAERRAPLRGSNTAYVIFTSGSTGRPKGVAVSHAAIVNRLVWMQGRYGLTGADVVLQKTPFTFDVSVWEFFWPLQVGARLVVAAPDGHRDPGYLAAVMRAESVTVAHFVPSMLAVFVAESAVGGISSLRYVFASGEALAAAVAARVRSVLPAVVVHNLYGPTEAAVDVTFHEVTDADVVSVPIGAPVWNTGVFVLDGRLHPVPVGVPGELYLAGVQLARGYVGRSDLTADRFVANPFGAAGERLYRTGDLVTWTAGGELEYLGRTDFQVKLRGLRIELGEIEAALLEVPAVAQAVVLVRAEQLVAYVVTTAGAVFDEDEARSAVGHVLPSYMVPSAFVVLAELPLNASGKLDRKALPEPVFEVKAFRAATTPVEEIVASVFAEVLGLERVGLDDDFFALGGNSLIATQVVSRIGAALDASVPLRVLFENSTVEALAARIDGHDGPARRAPLVPQPRPERVPLSLAQQRMWFLNRFDPDSTANNIPVAVRMSGRLDVPALEEAVCDVLARHESLRTVYPDLDGYGYQKVLAPSEARVPLEAVRIDPAQLPDELRTLAATHFDVSTDVPIVVRLLCLSPEEHVLVAVMHHIAGDGFSMGPLTRDIMVAYAARSLGNEPAWEPLEIQYADYTLWQRDVLGSEDDPDSLVTRQLEYWKQTLDGLPDGLDLPTDRPRPAVATNRGATHRLTLDESLHAALGRLAGEQRATVFMVVHAALALLLARLGTSRDIAVGTPVAGRGERSLDNLIGMFVNTLVLRTEVDTADTFAELLARVREVDLGAFAHAEVPFERLVDVLAPERTQARTPLFQVMLAFQNIGDVALELPGLSVAQLPLDGGVAKFDLMVTILEGQAAGTDAGALAVEISYATDLFDASTIAAVGDRFVRLLRLVTERPDVPVGDLPMLPGAELGAVEQLSHGPRRALDSDATLVDLLARQAACTPDAVAVESAESTWTYRGFGSRVNALARYLVAHGAGPDTVVAVAASRSTEMLVAIHAVLAAGAAYVPLDPDQPADRIAYVLESASPVMVLARTGSDRLPGAGTVPIVALDEADTAPYGDAPLTDADRLAPLRPDHLAYVLYTSGSTGRPKGVAVPHAAVVNQLLWMQDQFGPGAGDVLLLKTPATFDASVWEIFLPPLVGARIVVGAPDLHRDPAAMAAAIARHAVTLAQFVPAVLDAVLEHLDRATAASLTQVFCGGESLPADTVARLHALSDAPVHNLYGPTETTIQTVHRTAGPGDTATVPIGTPVWNTGALVLDERLHPVPLGVAGELYLTGPQLARGYHGRPDLTAERFVADPWSSGERMYRTGDLVRWTAAGELDYLGRTDLQVKLRGLRIELGEVESQLTALDEVRQAVAVVREDPRFGSQLVGYVVPEPGVAFDPARAKDALATTLPSYMVPSAFVALEAFPLNASGKIDRRALPAPTFEARTFTAPRTPVEEIVAGVFAQVLGVPRVGRDDDFFDLGGNSLVATQVAARLSDALDASIPVRALFDAPTVEALAVRAEQEAGAGRRTPLAPYERPERIPLSPAQQRMWFLNRFDPGSAVNNVPIGVRFTGALDVPALRGAIRDLTERHEVLRTIYPDVDGTGYQQILPESPVRLEVEQIDAQALPDRARELVTRGFDVTTEVPFRAVVFELSRTEHVLLFVAHHIATDGFSLRPLARDVMVAYAARTRGELPGWAPLEIQYADYALWQRDVLGSEDEPGSVAAEQVQFWKRTLAGLPDQLDLPSDRARPERASGHGRTSRFHVDEALHDRLQNLAHEKNTSLFMVVHAALAVLLARLSATEDIAIGTPVAGRGEAALDDLVGMFVNTLVLRTDVQGGQSFAELLSAVRESDLDAFAHADVPFERLVEILDPERSQARHPLFQVVLTFQNIGQAEFELDGLALEALDYDPPTAKFDLQFTFSEQVAEDGSAAGIAAAVTYATDLFDELRVAAFAEQLLRILRAVAADPSVAVGDIEIVDEFERELVVSRWNSLGDDVAPADVTLVDMFEARVAAAPGDTAVRFGDEALTYAEFASRARRLARHLISVGVGPESLVAVALPRSPDLVVALVAVLEAGGGYLPVDPNYPADRIEFMLTDAAPAAVLTASGTGIEVPTAVPVVELDTVDLSGTDDAPIRDEERTAPLGAANLAYVIYTSGSTGRPKGVLIPHRNVVRLMVNTESVYGFGPSDVWTMFHSYAFDFSVWELWGPLLYGGTLVVVDWFTSRSPEAFRELLVRERVTVLNQTPSAFYQLAEADRTAGGTEGDLALRYVIFGGEALEPRRLAGWFTRHGDTSPRLVNMYGITETTVHVSYREIGAELAEAGSASIVGVPIAGLRVYVLDTRLNPVPVGVAGEMYVGGGQLARGYLGRPDLSAARFVADPFSADGGLLYRTGDVARWAVSGDLEYLGRADDQVKIRGFRIELGEVESAVLAQPTVGQAAVIVREDAPGAARIVAYVVPADGATVDVEELRAGAGALVPEYMVPSAFVVIDAIPLTVNGKLDRRALPEPVFETRVFRAPSTPVEEIVAGTFAEVLGVERVGADDDFFELGGNSLIATQVVSRLGAALDTQVPVRTLFEASTVAALAARVEQDATGGARVPLTARTRPERIPLSPAQQRMWFLNRFDPESTAYNIPMALRLTGDLDVDALRAAVADLVARHETLRTVYPETNSGPVQDIRPATAVPVDLDPIDVPAAELEPRLRELASTGFDVTREIPLRIALLRLAPTEYVLVTVVHHIAADGSSMVPMVRDVMTAYAARSAGTEPAWAPLELQYADYALWQRELLGSEDDPESLAARQLDHWRTALADLPDQLDLPTDRPRPVQQSFRGDRVEFVVDADVHAALRDLARARNATVFMAMHAAFAALLARLSGSDDIAVGTPIAGRGEAAVENLIGMFVNTLVFRLSVDGNRSFDELLGAARETDLQAFAHADVPFERLVEVLNPARSTARHPLFQVGFSFQNQQRTELELAGLTVAPIDLEGGTSQFDLHLIVSDRYDEQGAPAGMDAILTFATDLFDECTARAVAERFRQLLRALVQAPDVPVGEHPVLLAREEHDVLAAWNDTAHETGAAATLVDLFDEQVRRDPGAVALVYEGAAVTYGEFDARVNRLARHLIAQGVGPEDRVALIVRRSPELVVGMYAIAKAGGAYVPLDPDQPAERNAYILDTAAPTCVVTVAADRIDVPGVPVVELDRVDLSGLPDAPVTAAERRAPLRAANTAYVIFTSGSTGRPKGVAVPHAAVVNQMVWKRDAFDLGPDDAVLLKTVATFDLSVWEFWSALTSGSRLVIATADGHRDPDYLLRLLRDERVTTLHVVPSMLSMLTTAAGGEVASSLRRVLAIGEALPAATARQFRADNAAALFNLYGPTEAAVSVTVHETSDADTTVVPIGVPEWNSRVYVLDARLRPVPIGVAGELYLAGAQLARGYHGRPDLTADRFVADPFGGGRMYRTGDIVHWNRDGELVYRDRADFQVKVRGYRIELGEIESVLRARDGVRDVAVLVRTDPHVGDRLVAYVVPAVGADAAGADAAGFDAAETKTALAQALPSYMVPSAFVVLEALPLNTNGKLDRRALPEPEFETGQFRAPTTPVEEIVARILAEVLGIERAGLDDDFFELGGNSLLATQLASRLGVALDTRVSVRTVFEASTVAALAGRIQPSVGRGARPPLVPQPRPDRIPLSLAQQRMWTLNQVDPGSGVYNIPVAVRLRGSLDTEALRSAVADVIARHEVLRTVYPDTEDGPVQVVLPTAQALPDLAPVPVSENEIVDRLTDVLGAGFDVTAPTPPVRARLFRVADDEHVLALVAHHISADGYSMRPLVRDVMVAYAARAEAQMPGWAELPVQYADYTLWQQRVLGSPDDPDSELSRQLGYWTDELTGSPELLALPTDRPRPARQSTEGDSVTFTIGEALAQRIEKTAREHNATVFMVVHAALAVLLSRLASAEDVAVGTPTAGRAEEVLDDLVGMFVNTLVLRTRVAGGDTFADLLAQAKEKDLAAFGNADVPFERLVDAVGRRRSSSYTPLFQVMLTFQNIETGTLELPGMAVTPLEAGTHQAKFDLQCTFVEQFAPGGGLGGLEVIFTYATALFDRETVELFAERFTRILEAVTSDPQIRLRAIDILTEAERARLAAPRKPRTVADLPDLVAAAAEAAPDAVALSHEGRDVTFGEFAQKLAATATATGGALTAEALVPVVLNTLIPGVLPALGADGFAELVRSVLAAADEITGGGL
>NZ_CP024890.1|WP_017682323.1|3223778_3224126_-|hypothetical-protein
MTLAIDIFLILHFIGLAGIIGSWLAVIKEPRVVAGMLHGAILQVVTGLALVGLNEADGADLNHMKIGVKLVVAVVILVLAIVGLKKERQNPGSTAALAHAAGALGVLNVVIAVLW
>NZ_CP024890.1|WP_102031326.1|3224203_3226165_-|acetoacetate--CoA-ligase
MTDTQIPPQWTPTEQDVASARLTAFARWVERRHGVSLPDYHALWRWSVDNLGPFWQDVWDWFDVRSRTDPGPALDDATMPGAVWFPGARLNYAEHALRHARDDRPAIVHVGEDGERAELSWAELARQTAALAATLREHGVGVGDRVVGYLPNIPEAVVALLATASIGAVWAACGQDYSAPAALDRLGQLDPTALITADGYRFAGRTHPRAEAVARLREQLPSLALTVVVPRLADPHQDLEGALTWEAATVGEHPLSPEPVPFDHPLWVVFSSGTTGLPKGIVHGHGGVLLEHLKAVSLHTDLGSDDTFFWYTSPSWMMWNFQAAGLLVGATIVCYDGSPSHPRVDRLWEIAAQERVTVLGTSPGYVLACIKAGVVPRRDHDLSALRAIGVTGSTLPASSSRWLADNVGEHVPVMSITGGTDVVSAFVGAVRTVPVWPGELSVPYLGVALDAFDEQGRPVRGDVGELVVTAPMPSMPVRFWNDPDGHRYREAYFSVYPGVWRHGDWITITGRGTVVMHGRSDSTLNRHGVRMGSADIYQAVEKLPEVLEALVIGAEQPDGGYWMPLFVVLADGVTLDDALREKIRTVIREQASPRHVPDDIVAAPGVPHTRTGKKLEVPIKRLFQGADAARTVDRSAVDTPELLDWYAQQRQAR
>NZ_CP024890.1|WP_102031327.1|3226161_3227004_-|CoA-ester-lyase
MYGVGGPAWLFCPADRPERFGKAAATADVVILDLEDGVAPGDKDYARKCLQDTALDPARTVVRVNPAGTDEHDADLKALAVTNYTRVMLAKCESAQQVTSLAPREVVALIESPLGALKVDEIALAAGTVGLMWGAEDLVVGLGGQSSRRADGTYRDVARHVRSQALLAAKAYGRFALDSVFLDIRDHDGLRAEALDAVAVGFDAKVAIHPGQVGVIRSAYAPSEQDVAWARRVLAAVPEERGVFQFEGRMVDAPVLRHAEQILHRAVEARSGDHRGSATA
>NZ_CP024890.1|WP_010591909.1|3227163_3228000_-|CoA-ester-lyase
MRSVPAVGGTAWLFCPADRPERFGKAAATADVVILDLEDGVAPGDKDYARKCLQDTALDPARTVVRLNPAGTSDHLADLAALDRTPYTRVMLAKCESAQQVTSLAPREVVALIESPLGALKVDEIALAAGTVGLMWGAEDLVVGLGGQSSRRADGTYRDVARHVRSQALLAAKAYGRFALDSVFLDIRDHDGLRAEALDAVAVGFDAKVAIHPGQVGVIRSAYAPSEQDVAWARRVLAAVPEERGVFQFEGRMVDAPVLRHAEQILHRAEESAAAADR
>NZ_CP024890.1|WP_010591910.1|3227996_3228482_-|MaoC-family-dehydratase
MSARVTQRGLWFEEFEVGTVYEHRPGRTVTEADNVAFTTMTMNTQALHLDAAYSEGTEFGERLVNSMFTLSTLVGLSVAQLTQGTIVANLGFSEIKFPAPVRHGDTLYAETLVTDKRASKSRPGQGIVTLEHTARNQRGDVVAVAVRQTLVQCRPAGEEQA

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Crispr_ID: NZ_CP024890_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024890_6

4652130-4652226

Orphan

Consensus_repeat	Method
GCGCGGTTCAGCCGGCGCGCACAGCGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024890_6

>merge|NZ_CP024890|6|4652130-4652226|CRISPRCasFinder
GCGCGGTTCAGCCGGCGCGCAGCGCGGTTCAGCCGGCGCGCACAGCGCGGTTCAGACGGCGCGCACGGCGCGGTTCAGACGGCGCGCACGGCGCGGT

>NZ_CP024890|6|6|4652130-4652226|CRISPRCasFinder
GCGCGGTTCAGCCGGCGCGCAGCGCGGTTC	AGCCGGCGCGCACAGCGCGGTTCAGACGGCGCGCACG
GCGCGGTTCAGACGGCGCGCACGGCGCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024890.1\|WP_010594131.1\|4647703_4648405_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP024890.1\|WP_029540006.1\|4657151_4657733_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379324
NZ_CP024890.1\|WP_010594145.1\|4658584_4659325_+\|GAP-family-protein	unknown	unknown	gnl\|CDD\|378566
NZ_CP024890.1\|WP_010594147.1\|4660610_4661795_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP024890.1\|WP_102031734.1\|4659423_4660605_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379062
NZ_CP024890.1\|WP_010594134.1\|4650556_4651018_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP024890.1\|WP_010594130.1\|4647074_4647695_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP024890.1\|WP_003938723.1\|4649573_4650050_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|153099
NZ_CP024890.1\|WP_017680135.1\|4651349_4652129_+\|putative-protein-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|274733
NZ_CP024890.1\|WP_010594138.1\|4652976_4653498_+\|DUF1992-domain-containing-protein	unknown	unknown	gnl\|CDD\|378159
NZ_CP024890.1\|WP_017680134.1\|4651035_4651326_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_CP024890.1\|WP_059174558.1\|4653731_4654640_+\|polyphosphate-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143622
NZ_CP024890.1\|WP_010594140.1\|4654682_4655360_+\|DUF4956-domain-containing-protein	unknown	unknown	gnl\|CDD\|379819
NZ_CP024890.1\|WP_010594129.1\|4646252_4646993_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP024890.1\|WP_040269971.1\|4661963_4663427_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP024890.1\|WP_102031996.1\|4655455_4656901_+\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|227642
NZ_CP024890.1\|WP_102031733.1\|4657960_4658377_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236607
NZ_CP024890.1\|WP_010594132.1\|4648401_4649157_+\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP024890.1\|WP_010594133.1\|4650046_4650511_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP024890.1\|WP_006944063.1\|4649330_4649528_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|377304

Protein	Function_ID	Function_description	E-value
NZ_CP024890.1\|WP_010594131.1\|4647703_4648405_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	2.81426e-31
NZ_CP024890.1\|WP_029540006.1\|4657151_4657733_+\|AAA-family-ATPase	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	2.03235e-07
NZ_CP024890.1\|WP_010594145.1\|4658584_4659325_+\|GAP-family-protein	gnl\|CDD\|378566	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein. SAP is a transmembrane transport protein with six predicted transmembrane helices, with a hydrophilic domain between helices 3 and 4. This hyrodphobic region is highly variable among identified Gap-like (GPL, peptidoglycolipid, addressing protein) proteins and may be involved in substrate recognition. SAP also belongs to the LysE protein superfamily (pfam01810), whose members have been implicated in small molecule transport in bacteria. Other Gap proteins export metabolites across the cell membrane so it is possible that Sap specifically may be involved in transport of sulfolipid-1 across the membrane.	6.19819e-28
NZ_CP024890.1\|WP_010594147.1\|4660610_4661795_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	9.55087e-52
NZ_CP024890.1\|WP_102031734.1\|4659423_4660605_+\|ATP-binding-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	6.98561e-10
NZ_CP024890.1\|WP_010594134.1\|4650556_4651018_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.6229e-14
NZ_CP024890.1\|WP_010594130.1\|4647074_4647695_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	1.02453e-32
NZ_CP024890.1\|WP_003938723.1\|4649573_4650050_+\|bacterioferritin	gnl\|CDD\|153099	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain. Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) bestowing ferroxidase activity.	6.87203e-73
NZ_CP024890.1\|WP_017680135.1\|4651349_4652129_+\|putative-protein-N(5)-glutamine-methyltransferase	gnl\|CDD\|274733	TIGR03704, PrmC_rel_meth, putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific. This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. [Protein synthesis, Ribosomal proteins: synthesis and modification].	3.05053e-111
NZ_CP024890.1\|WP_010594138.1\|4652976_4653498_+\|DUF1992-domain-containing-protein	gnl\|CDD\|378159	pfam09350, DUF1992, Domain of unknown function (DUF1992). This family of proteins are functionally uncharacterized.	2.16492e-22
NZ_CP024890.1\|WP_017680134.1\|4651035_4651326_+\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	6.42479e-32
NZ_CP024890.1\|WP_059174558.1\|4653731_4654640_+\|polyphosphate-polymerase-domain-containing-protein	gnl\|CDD\|143622	cd07750, PolyPPase_VTC_like, Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, -3 and- 4, and similar proteins. Saccharomyces cerevisiae VTC-1, -2, -3, and -4 comprise the membrane-integral VTC complex. VTC-2, -3, and -4 contain polyP polymerase domains. For S. cerevisiae VTC4 it has been shown that this domain generates polyP from ATP by a phosphotransfer reaction releasing ADP. This activity is metal ion-dependent. The ATP gamma phosphate may be cleaved and then transferred to an acceptor phosphate to form polyP. PolyP is ubiquitous. In prokaryotes, it is a store of phosphate and energy. In eukaryotes, polyPs have roles in bone calcification, and osmoregulation, and in phosphate transport in the symbiosis of mycorrhizal fungi and plants. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.79739e-61
NZ_CP024890.1\|WP_010594140.1\|4654682_4655360_+\|DUF4956-domain-containing-protein	gnl\|CDD\|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	1.6739e-25
NZ_CP024890.1\|WP_010594129.1\|4646252_4646993_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	6.09873e-53
NZ_CP024890.1\|WP_040269971.1\|4661963_4663427_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP024890.1\|WP_102031996.1\|4655455_4656901_+\|CotH-kinase-family-protein	gnl\|CDD\|227642	COG5337, CotH, Spore coat assembly protein [Cell envelope biogenesis, outer membrane].	3.27891e-115
NZ_CP024890.1\|WP_102031733.1\|4657960_4658377_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236607	PRK09648, PRK09648, RNA polymerase sigma factor ShbA.	3.4273e-22
NZ_CP024890.1\|WP_010594132.1\|4648401_4649157_+\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	7.91033e-15
NZ_CP024890.1\|WP_010594133.1\|4650046_4650511_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.6065e-22
NZ_CP024890.1\|WP_006944063.1\|4649330_4649528_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|377304	pfam04324, Fer2_BFD, BFD-like [2Fe-2S] binding domain. The two Fe ions are each coordinated by two conserved cysteine residues. This domain occurs alone in small proteins such as Bacterioferritin-associated ferredoxin (BFD). The function of BFD is not known, but it may may be a general redox and/or regulatory component involved in the iron storage or mobilisation functions of bacterioferritin in bacteria. This domain is also found in nitrate reductase proteins in association with Nitrite and sulphite reductase 4Fe-4S domain (pfam01077), Nitrite/Sulfite reductase ferredoxin-like half domain (pfam03460) and Pyridine nucleotide-disulphide oxidoreductase (pfam00070). It is also found in NifU nitrogen fixation proteins, in association with NifU-like N terminal domain (pfam01592) and NifU-like domain (pfam01106).	5.90478e-07

>NZ_CP024890.1|WP_017680135.1|4651349_4652129_+|putative-protein-N(5)-glutamine-methyltransferase
MPPPPDVTAVAATLRRAGCVFAEDEARLLIDAARTPGDLADSVRRRAAGEPLEHVLGWTEFRGLRIHVTPGVFVPRRRSEFLVECAVALAAPGVVVDLCCGSGALGAAVAAAVADVELHATDLDPAAVECAGRNLAAFGGHVYEGDLYDPLPAGLRGRVHLLLANVPYVPTADLALLPADAREHEARIALDGGADGLDVLRRVAAAAGRWLAPGGHLLVESSTQQADGIAACFDRNGLTPQVAHSDDDFATVVVGTAPR
>NZ_CP024890.1|WP_017680134.1|4651035_4651326_+|N-acetyltransferase
MSDPSVVAVHNPQRQRYELRDGDTVVGYTQYHPDGDVQLVFDHTEVDNAYSGRGLSSTLVRFALDDVRARGKRVVAICPFVDGFIDKHPEYKDLAD
>NZ_CP024890.1|WP_010594134.1|4650556_4651018_+|MarR-family-transcriptional-regulator
MTETRWLSDDEQRTWRAYLDSTRLLMNALDRQLTRDSGMSLTDYELLVALSEAPGRRLRMRALADAVVTTRSGVTRAISRLVDAGWVRRVECDEDKRGMLAELTDAGAAKLAQASPGHVEAVRSYVFDLLGPRDVTRFGDTYTAMRTHLLENT
>NZ_CP024890.1|WP_010594133.1|4650046_4650511_+|carboxymuconolactone-decarboxylase-family-protein
MSDKRVPIDKQTRPVYRAQIAVAQAIRQATADAGLGRRLVELVNIRVSQINGCAYCLDVHVRDALREGETTQRLAVLRAWRDTDLFTEQEQAALTLAESITELPDSRAQDRDYAFARARLTEDQLSAIAWVAVAMNTFNRVSIVSRHPVRPPQE
>NZ_CP024890.1|WP_003938723.1|4649573_4650050_+|bacterioferritin
MKGDKKVIEYLNEQLTAELTAINQYFLHSKMQDNNGWTKLAAHTRAESFEEMRHAETLTDRILFLEGLPNYQRLGTLRLGETVKEMFEADLQVEIEARDRLRKGAEYMRSVHDITSARIFEEILANEEEHIDYLETQLGLLEQLGEPLYISVHVSPPE
>NZ_CP024890.1|WP_006944063.1|4649330_4649528_+|(2Fe-2S)-binding-protein
MIVCSCHALSHRHIEAHIAAGARCTREIGAACRAGTDCGRCVRNISAIVRASRERDERIELETAV
>NZ_CP024890.1|WP_010594132.1|4648401_4649157_+|AIM24-family-protein
MSVVLNPSHLVGSDNLPGNHYAFCIDLQSPWFLSKGAMIAYYGQVQFTSLTHGLQGQLLQMVAHQFSAPLYMGDYVVAEGYGKLILGDRGYDINSYDLDDGNLTIRAANLLAFEPGLSLNQSIVPGFLTLIGTGKFLASSNGPVMFAEPPLRVDPEALVGWADCPSPSHHYDEAWVNGFVAAGARMFGVQSGEERQFDFTGAGTVLVQSSEKVIDDSAVVRTIEGQLPGLTPGGLQRINQVVASQLQSQQH
>NZ_CP024890.1|WP_010594131.1|4647703_4648405_+|AIM24-family-protein
MFSKINGKVVKVDLNQSGPVVARRGAMLFYTGMVQFAPHQVPGAGGMPGMGGIAGMAGRMMQGEHERTMLAQGNGVVHYGFRGLEVHVVDLSAGGDLRVEASRLLGYTASLQSSVVSMAAPPAGGGGGGGGFLGALRNAATGMVTGTGMFTTQLSGRGTAVLLGHGGFLELQVGGPAPVVVDPQSFIAASGPVRTELKSSMSWRNAGRSGGEGLQLECTGQGIVYVQASEEKL
>NZ_CP024890.1|WP_010594130.1|4647074_4647695_+|AIM24-family-protein
MRLVEKSKRVIEAHLNNTSVRALSGSMVAYEGQVQFKSAGFGGGEGVLAGLRQRATGEGLSLMECTGNGVVYLAHQGQDVTVLELNNETLQVESEQLLALNGNLGTNVTFAGVRGNMSGQGLFTTTVTGSGQVALLSAGGPLIHLEVSPQYPLVVDPDAFVCAKGQLSQSFVTDVSWRTFVGQGSGEAFSLRWDGMGVVSIQPAER
>NZ_CP024890.1|WP_010594129.1|4646252_4646993_-|IclR-family-transcriptional-regulator
MPDAPDRSLLGRAFAVLGAFTAERPRLTQSELSRRTGLPLPTVFRLCGQLVDAGALERRADGSYQIGVRVWELGALAPRAHGLRQVAMPYLEDLFDATRENVQLVVREGLEALYVERLSARGAVPVVGRAGGRLPLHASSGGLVLLAHGGTELLQEVLDAGLERFTPATIVDESRLRRVLDDIRRTGVVIAREYLNVGTMAMAAPIRERSGRVVAAVSVVVSIEADPAPLIPAMRAAASGISRRLT
>NZ_CP024890.1|WP_010594138.1|4652976_4653498_+|DUF1992-domain-containing-protein
MTERKRPDITFESWIERQIRVAQERGDFDNLRGAGKPIPHRSDDELWWVKDYLRREGLSTEALLPPPLQLRKEVERLRDTVRDVPSEPAVRQIVRELNRRIVDCLRAPSGPLVPIHRVDPEEVVRQWATDRAELRSQRAERAAAAAAALREYTAEPPRRRWWHRVLGIRPAGT
>NZ_CP024890.1|WP_059174558.1|4653731_4654640_+|polyphosphate-polymerase-domain-containing-protein
MGVFDRFRTSTPQDMPPTDAVPTAPTGYRQTAGSLHAFNRYEIKYFVDELKVPELRRELAARMDTDPYSPHGGYPVTSLYYDTPDLRFYWEKIEGLRFRRKLRMRLYGNPSECTDDTPVHIEVKQRVNRVTQKRRIAMPYGTAQRWLDGRQEVGCDPPQRPFVHEVTTLIGNLDLRPIVTTGYLREAFVGREADLGLRVTIDHKVHGRDGDFGFASGAQNRFVVPPKLAIVELKANERVPYWATDLTARMDMSVVRVSKYCQSVEAFGLAPRSRFGAPGLVLPQGFDGRVPTGLLETTTTVP
>NZ_CP024890.1|WP_010594140.1|4654682_4655360_+|DUF4956-domain-containing-protein
MNFDLQDLSGTFTTFDIIVSLSLSFVLASIIGWVYRHTHKNVSYSQSYVQTLVLVGMVIALIMLVVGSNIARAFALVGALSVVRFRNAIKETRDVGFIFLVMAVGMTTGTRFYLLAIAATIAICLVLLIMSKFNWFELDVRRQVVKVQVPPEQQYSAMVEDVLVRYCTEFELVSTESVRSGALTELYYTAQLKKDAKPNELISALSAVNTGQRVTVLTGYDQTDI
>NZ_CP024890.1|WP_102031996.1|4655455_4656901_+|CotH-kinase-family-protein
MFVAFVTILATVFGATRIRPYLTGDPTIIASEITDNITGTVDLFDASVPHELSVEITDAEYDEMITAFQSTGEKKWVTADVTLDGTLITDVSVRLKGNSTLMGLRGTDTRVGGQGVAPPAGLELPEGFEPPATGGMSQATADDPTSLPLLVSFDENADGRAYQGMTEISVRPGSPVLNEAMALSLTAETEQPTQRYAYTVYSVNGSATTTRLLLEHPDDTYANSLFDSEGYLYKADASSRFEYVGDDQSDYADQFEQINAVGTGNLQPIVRFLEWLDSAGDEEFDAHLSEWVDVDSFARYVATQNLLVNGDDMSGPGQNYYLWYDLGTARLSVVSWDLNLAMQGDATTGPHDTVSMGPGARGGAGQDGRGTPPAGVGAVAQPRAMPSDAAAPPGDGRMQSGNALKTRFLGSDAFTGVYEDAYRELYDQMYGSGRALEILDTLVATVPVSDGLPADSLRSSADSMRSWIEQRTAALAELRDS
>NZ_CP024890.1|WP_029540006.1|4657151_4657733_+|AAA-family-ATPase
MVGGIPGAGKSTLLRRIEHDIPGLTVLDPERRAEGLAAALPPDLPYRRYRPLVHLMHTLDVVRTLLAGPHRSEGPVAVHDTATRSRRRDWTARLARRRGWTPVLVFLDVPRDVAQAGQHARGRVVNESSFARHWHRWTVLRSHLTDEDDATAGSPWDQVVVTTRDNAKSRVCDVLTQDETVPCELGGGSPVPQ
>NZ_CP024890.1|WP_102031733.1|4657960_4658377_+|sigma-70-family-RNA-polymerase-sigma-factor
MRPWIKQRTAALDPENPDAVRSDPRNAAPVGDVPDVPWGPEAPETHARRRYERRRIDALLDVLTDRQRDILHLRVVHSMSTAETAAVLHITPGAVRLGQHRALSRLRVALTRPAGEPITCRDTVVPLDARRRDATRPA
>NZ_CP024890.1|WP_010594145.1|4658584_4659325_+|GAP-family-protein
MSVSTGRGCDYSSSEIDDRRSEGWLMAGAIGQSLPIAVGLLLAAMPIVMLSVLLVTKRPLRVSYAFVGGWFAGLLVVGAVVIAVADVIMLSDEPTWWAAAAKLVLGVVLVLLAVRKWYSRPQPGEESTVPGWMAAAQTMTARRALALGFLFAAANPKNLALVAAGAVVIADATARVPEQIVALIVFAVVASLGVAAPPAVRGVFADRADRALAAADEWMTRQHTVIMAAVLLILGLILIGNGIAGL
>NZ_CP024890.1|WP_102031734.1|4659423_4660605_+|ATP-binding-protein
MDLELNPFKPGSGLRPPALEGRDEQIGAFELLVARSKRQNYDRGLILSGLRGVGKTTLLNALVEHADRQGWLTIALEARPNEAGTSAVRAKLSQELTVGLRRYSRKHRIQHAIDPLIDLARGFSLGLGLGLGPATASFSLDQPPAASGDIDLDLEELVEAITAELRPRSSAFGLFVDEMQDLDSDLLSALLAVQHRASQREWPFFLIGAGLPNLPAVLAGNRSYAERQFLYSTIGPLSPTAAADALRIPVRRQGGDFTDDALAVLVQASGGYPYFLQEFGKAIWNIAPHSPFQLEDAELAVEVGCRHLDEGFFPSRWNRATDRERRYLAALAAAGEEAPRSGKVAQLMGSTATGVSDVRNSAIRKGLIWAPEHGRIAFTVPGMADFIRRQPAE
>NZ_CP024890.1|WP_010594147.1|4660610_4661795_-|ROK-family-protein
MSRSSSAPATAGEVFALVRAGAATTRSEIGHHTGLSRTAVAARVAALQDLGLVVETEEGPSTGGRPPLTLTFGAGAGIVLVVAIGRSRTQLAVCDLAGDLLRTEDLEQEIGASPGELMPKVAAHLADLRAALGPGAPRTVGIGVSLPGTVDTARGCSLDSPMMAGWDGVELQPFLADLGGAPVFVDNDANVMVLAERLGERRKFDDMLLIKASTGLGAGIVSGGVLQRGAVGAAGEIGHTKTAAAQGVLCRCGDVGCVEAIAGGWALVRDLQEQGRDVTHIRDVVALAVGGDAEARRMIRDSGRRIGEVIAGAVNLLDPAVLVVGGDMAEAYDVFVAGLRETLYRDAVSVATRALQILPWSHGDRSGMIGCASMALDQVLSVRAVDRMVAERGR
>NZ_CP024890.1|WP_040269971.1|4661963_4663427_+|glucose-6-phosphate-dehydrogenase
MSPAAPCTVVVFGGTGDLAVRKLLPALYLRDRDGQLPPGSRIVGAARAGLDTDGYRDKVRGELARFVPAPLLDAGTLTRFLDRLDYVSLDFAGGDDWSALHDVLPPDSVRVFYLACAPSLFGPISHHLARHGLVEPTSRVVLEKPIGRDLASAHAINDAVGEVFDESQIFRIDHYLGKESVQNLLVTRFANTLLEPLWNSTWIDHVQITVSESLGVGTRGGYYDTSGALRDMLQNHLLQVLCLVAMEPPTVVDRETVRDEKLKVLQALRPMTAEDVERFTVTGQYGPGLVDGGAVPGYRDEVENPDSRTETFVAVRAEVRNWRWAGVPFYLRTGKRLEKRSSEIVVQFKDVPHPMFPRAEGATEPNRLVIRLQPDEGICLHMTAKEPGPGGIRLRPVSLDLNYVDAFDRPSPDAYERLLMDVVRGDPTLFMRRDEVETAWAWVEPILQTWDRTGRMPRRYPAGTSGPTDATTLIERDGRAWYEGTSV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024890_1	1.1\|1592800\|17\|NZ_CP024890\|CRISPRCasFinder	1592800-1592816	17	NZ_CP024890.1	3280347-3280363	1	0.941
NZ_CP024890_1	1.1\|1592800\|17\|NZ_CP024890\|CRISPRCasFinder	1592800-1592816	17	NZ_CP024890.1	4747183-4747199	1	0.941
NZ_CP024890_1	1.1\|1592800\|17\|NZ_CP024890\|CRISPRCasFinder	1592800-1592816	17	NZ_CP024892.1	186031-186047	2	0.882

1. spacer 1.1|1592800|17|NZ_CP024890|CRISPRCasFinder matches to position: 3280347-3280363, mismatch: 1, identity: 0.941

cgaccacgcgatccggc	CRISPR spacer
cgaccacgcgatcctgc	Protospacer
************** **

2. spacer 1.1|1592800|17|NZ_CP024890|CRISPRCasFinder matches to position: 4747183-4747199, mismatch: 1, identity: 0.941

cgaccacgcgatccggc	CRISPR spacer
cggccacgcgatccggc	Protospacer
**.**************

3. spacer 1.1|1592800|17|NZ_CP024890|CRISPRCasFinder matches to position: 186031-186047, mismatch: 2, identity: 0.882

cgaccacgcgatccggc	CRISPR spacer
cgaactcgcgatccggc	Protospacer
*** * ***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024890_2	2.3\|1685515\|34\|NZ_CP024890\|CRISPRCasFinder	1685515-1685548	34	NZ_CP049160	Caballeronia sp. SBC1 plasmid pSBC1_4, complete sequence	261975-262008	8	0.765
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	41927-41957	8	0.742
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	MT522001	Microbacterium phage Karate, complete genome	41572-41602	8	0.742
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	54330-54360	8	0.742
NZ_CP024890_2	2.3\|1685515\|34\|NZ_CP024890\|CRISPRCasFinder	1685515-1685548	34	MH673672	Thermus phage phiFa, complete genome	22813-22846	9	0.735
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	NC_019917	Burkholderia phage BcepMigl, complete genome	53620-53650	9	0.71
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	FJ937737	Burkholderia cenocepacia phage BcepIL02, complete genome	53288-53318	9	0.71
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	NC_012743	Burkholderia phage BcepIL02, complete genome	53288-53318	9	0.71
NZ_CP024890_4	4.1\|2549323\|31\|NZ_CP024890\|CRISPRCasFinder	2549323-2549353	31	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	210364-210394	9	0.71

1. spacer 2.3|1685515|34|NZ_CP024890|CRISPRCasFinder matches to NZ_CP049160 (Caballeronia sp. SBC1 plasmid pSBC1_4, complete sequence) position: , mismatch: 8, identity: 0.765

tcttcggcgggatgtcgagtttgaagggggtggc	CRISPR spacer
tggtcggtgggatgtcgtgtttgaaggttggcgc	Protospacer
*  ****.********* *********  *  **

2. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
ggcgcgcgccacgtcgtccaggcgcaccgac	Protospacer
****************** ***.   *.  *

3. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 8, identity: 0.742

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
gacgcgcgccacgtcgtcaatggcgttcttg	Protospacer
*.****************** * ***....

4. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 8, identity: 0.742

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
gaggcgcgccacgtcgtcgaggtcgagcacg	Protospacer
*. ***************.******  . *

5. spacer 2.3|1685515|34|NZ_CP024890|CRISPRCasFinder matches to MH673672 (Thermus phage phiFa, complete genome) position: , mismatch: 9, identity: 0.735

tcttcggcgggatgtcgagtttgaagggggtggc	CRISPR spacer
cgtactccccgatgacgagtttgaaggtggtggc	Protospacer
. * *  *  **** ************ ******

6. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to NC_019917 (Burkholderia phage BcepMigl, complete genome) position: , mismatch: 9, identity: 0.71

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
caggcgcgccacgtcgtcgaggtcgagcacg	Protospacer
 . ***************.******  . *

7. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to FJ937737 (Burkholderia cenocepacia phage BcepIL02, complete genome) position: , mismatch: 9, identity: 0.71

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
caggcgcgccacgtcgtcgaggtcgagcacg	Protospacer
 . ***************.******  . *

8. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to NC_012743 (Burkholderia phage BcepIL02, complete genome) position: , mismatch: 9, identity: 0.71

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
caggcgcgccacgtcgtcgaggtcgagcacg	Protospacer
 . ***************.******  . *

9. spacer 4.1|2549323|31|NZ_CP024890|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ggcgcgcgccacgtcgtcaaggtcgtctccc	CRISPR spacer
atggcgcgccaagtggtcaaggtcgtggtca	Protospacer
.  ******** ** ***********  .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

209917 : 218101

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010595071.1\|209917_211546_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	2.5e-38	27.5
WP_010595072.1\|211652_212459_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	2.9e-08	33.9
WP_102030714.1\|212462_213587_+	lycopene cyclase family protein	NA	NA	NA	NA
WP_010595074.1\|213639_214614_+	Ku protein	A0A249XRB2	Mycobacterium_phage	2.3e-52	43.2
WP_190242398.1\|214658_215138_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010595076.1\|215167_215548_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_010595077.1\|215547_216036_-	SUF system NifU family Fe-S cluster assembly protein	A0A0K1LSF9	Mycobacterium_phage	2.4e-21	44.4
WP_010595078.1\|216035_217289_-	cysteine desulfurase	Q2XUY6	environmental_halophage	4.3e-99	45.4
WP_010595079.1\|217303_218101_-	Fe-S cluster assembly ATPase SufC	W8CYL7	Bacillus_phage	3.2e-07	27.7

DBSCAN-SWA_2

1698013 : 1709800

Mycobacterium_phage(55.56%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102030963.1\|1698013_1699054_-	hypothetical protein	A0A2R3ZZ20	Mycobacterium_phage	1.6e-59	43.5
WP_102030964.1\|1699050_1699353_-	hypothetical protein	NA	NA	NA	NA
WP_102030965.1\|1699361_1700105_-	hypothetical protein	A0A2P1JQC4	Mycobacterium_phage	1.5e-14	36.5
WP_102030966.1\|1700191_1701925_-\|capsid	major capsid protein	Q1A0A4	Mycobacterium_phage	1.3e-66	36.8
WP_161800540.1\|1702219_1702366_-	hypothetical protein	NA	NA	NA	NA
WP_102030967.1\|1702536_1702806_-	NrdH-redoxin	A0A2H4PFR8	Mycobacterium_phage	8.5e-13	41.0
WP_190242404.1\|1702805_1703015_-	hypothetical protein	A0A1B3AYE7	Gordonia_phage	3.5e-14	53.7
WP_145961925.1\|1703050_1705711_-	hypothetical protein	D4P7Y7	Rhodococcus_phage	4.5e-98	38.4
WP_102030970.1\|1705843_1707559_-	hypothetical protein	A0A0S2MU76	Streptomyces_phage	8.5e-58	34.1
WP_145961926.1\|1707562_1707877_-	hypothetical protein	A0A1B1PCJ5	Mycobacterium_phage	2.1e-07	32.8
WP_145961927.1\|1708030_1709800_-	hypothetical protein	D4P7X6	Rhodococcus_phage	1.5e-126	44.6

DBSCAN-SWA_3

1713296 : 1724090

Mycobacterium_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102030975.1\|1713296_1714522_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	8.2e-87	56.1
WP_190242375.1\|1714687_1714825_-	hypothetical protein	NA	NA	NA	NA
WP_102030976.1\|1714839_1715352_-	hypothetical protein	G8I4L2	Mycobacterium_phage	2.3e-11	45.0
WP_102030977.1\|1715826_1716222_-	DUF4326 domain-containing protein	A0A160DCT3	Gordonia_phage	8.9e-27	55.3
WP_102030978.1\|1716218_1716602_-	hypothetical protein	E0YQ53	Mycobacterium_phage	5.4e-21	46.2
WP_190242376.1\|1716598_1717900_-	AAA family ATPase	A0A2H4J7B1	uncultured_Caudovirales_phage	2.6e-51	33.4
WP_190242377.1\|1717896_1718130_-	hypothetical protein	NA	NA	NA	NA
WP_190242378.1\|1718126_1718942_-	hypothetical protein	M4W6Y7	Mycobacterium_phage	5.7e-52	65.6
WP_102030980.1\|1718938_1719169_-	sigma-70 family RNA polymerase sigma factor	A0A2H4JBI3	uncultured_Caudovirales_phage	8.5e-06	45.7
WP_102030981.1\|1719165_1719408_-	hypothetical protein	NA	NA	NA	NA
WP_145961930.1\|1719575_1720262_-	hypothetical protein	M9MUE6	Rhodococcus_phage	4.1e-19	37.4
WP_102030983.1\|1720303_1720486_-	hypothetical protein	A0A1B3B1U0	Gordonia_phage	6.7e-06	47.3
WP_145961931.1\|1720478_1721069_-	hypothetical protein	NA	NA	NA	NA
WP_102030985.1\|1721065_1721293_-	hypothetical protein	NA	NA	NA	NA
WP_102030986.1\|1721285_1721624_-	hypothetical protein	NA	NA	NA	NA
WP_102030987.1\|1721620_1721830_-	hypothetical protein	NA	NA	NA	NA
WP_190242379.1\|1721829_1721988_-	hypothetical protein	NA	NA	NA	NA
WP_145961932.1\|1721984_1722233_-	hypothetical protein	NA	NA	NA	NA
WP_145961933.1\|1722229_1722685_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_102030990.1\|1722681_1722960_-	hypothetical protein	NA	NA	NA	NA
WP_190242380.1\|1723041_1723194_-	hypothetical protein	NA	NA	NA	NA
WP_102030991.1\|1723190_1724090_-	AAA family ATPase	A0A088FSQ7	Mycobacterium_phage	8.6e-118	73.2

DBSCAN-SWA_4

2185646 : 2259980

Mycobacterium_phage(18.75%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102031134.1\|2185646_2187998_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	5.0e-109	47.0
WP_102031135.1\|2188225_2190466_+	protein kinase	T2AWK4	Cannes_8_virus	1.9e-12	29.8
WP_003938265.1\|2190453_2191008_-	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	5.3e-09	28.0
WP_102031136.1\|2191028_2192027_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_010594621.1\|2192029_2193070_-\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_010594622.1\|2193060_2194467_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_003938269.1\|2194637_2195129_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	2.8e-30	46.2
WP_010594623.1\|2195183_2196287_-	SRPBCC family protein	NA	NA	NA	NA
WP_010594624.1\|2196298_2197129_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_017681663.1\|2197276_2197798_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
WP_026137982.1\|2197862_2198336_+	YbaK/EbsC family protein	NA	NA	NA	NA
WP_102031137.1\|2198391_2199711_-	aminotransferase class V-fold PLP-dependent enzyme	A0A2K9L2Y3	Tupanvirus	1.8e-31	25.2
WP_172603617.1\|2200139_2204054_+	non-ribosomal peptide synthetase	NA	NA	NA	NA
WP_017681667.1\|2204050_2205412_+	M1 family metallopeptidase	A0A2K9L1R3	Tupanvirus	6.0e-22	23.7
WP_010594630.1\|2205416_2206610_-	MFS transporter	NA	NA	NA	NA
WP_102031138.1\|2206681_2207323_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_017681670.1\|2207518_2207899_+	hypothetical protein	NA	NA	NA	NA
WP_010595388.1\|2213643_2214921_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	5.4e-65	38.2
WP_102031139.1\|2214928_2215546_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_010595386.1\|2215548_2215782_-	Trm112 family protein	NA	NA	NA	NA
WP_010595385.1\|2215825_2218789_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_102031140.1\|2218916_2220338_-	argininosuccinate lyase	NA	NA	NA	NA
WP_010595383.1\|2220340_2221540_-	argininosuccinate synthase	NA	NA	NA	NA
WP_190242389.1\|2221599_2222145_-	arginine repressor	NA	NA	NA	NA
WP_017681571.1\|2222117_2223047_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_010595380.1\|2223051_2224239_-	acetylornithine transaminase	B5LJF5	Mycobacterium_phage	3.8e-12	32.3
WP_010595379.1\|2224235_2225180_-	acetylglutamate kinase	NA	NA	NA	NA
WP_017681573.1\|2225176_2226433_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_017681574.1\|2226429_2227503_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_010595375.1\|2227564_2227951_-	hypothetical protein	NA	NA	NA	NA
WP_010595374.1\|2227979_2230466_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_010595373.1\|2230520_2231591_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	2.9e-24	34.1
WP_010595372.1\|2231699_2232512_-	RNA methyltransferase	NA	NA	NA	NA
WP_003937964.1\|2232561_2232948_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_010595371.1\|2233012_2233207_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_017681575.1\|2233296_2233956_-	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	7.1e-13	33.1
WP_102031141.1\|2234313_2234667_+	recombinase RecA	NA	NA	NA	NA
WP_102031142.1\|2234679_2236491_-	pyruvate kinase	NA	NA	NA	NA
WP_017681577.1\|2236609_2237311_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_102031143.1\|2237320_2238460_-	lipase	NA	NA	NA	NA
WP_102031144.1\|2238511_2241445_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.3e-283	52.2
WP_102031145.1\|2241619_2242309_+	MBL fold metallo-hydrolase	A0A221J762	Mycobacterium_phage	1.7e-12	75.6
WP_102031146.1\|2242345_2242666_+	hypothetical protein	NA	NA	NA	NA
WP_102031946.1\|2242713_2242899_+	hydrolase	A0A221J762	Mycobacterium_phage	2.0e-13	69.8
WP_145961937.1\|2242967_2243342_-	hypothetical protein	NA	NA	NA	NA
WP_145961938.1\|2243643_2244639_+	light-mediated development protein DET1	NA	NA	NA	NA
WP_102031148.1\|2245870_2246422_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.8e-16	37.6
WP_029547282.1\|2247839_2249411_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_102031149.1\|2249462_2250785_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.3e-05	24.8
WP_145961939.1\|2251501_2252839_-	hypothetical protein	NA	NA	NA	NA
WP_145961940.1\|2253080_2254475_-	hypothetical protein	NA	NA	NA	NA
WP_102030975.1\|2256411_2257636_+\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	8.2e-87	56.1
WP_145961941.1\|2258893_2259127_-	hypothetical protein	NA	NA	NA	NA
WP_174824807.1\|2259162_2259980_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2790149 : 2809744

Skermania_phage(30.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_190242396.1\|2790149_2790833_+	helix-turn-helix domain-containing protein	G9FGX8	Rhodococcus_phage	2.0e-18	38.2
WP_102031236.1\|2791007_2791208_+	type II toxin-antitoxin system HicA family toxin	G8I6R4	Mycobacterium_virus	1.9e-09	54.0
WP_059174475.1\|2791279_2791660_+	hypothetical protein	A0A142KC36	Gordonia_phage	9.8e-23	45.4
WP_102031237.1\|2791735_2792071_-	hypothetical protein	NA	NA	NA	NA
WP_102031238.1\|2792067_2793045_-	glycoside hydrolase family 25 protein	G9FHQ8	Rhodococcus_virus	4.5e-64	54.0
WP_102031239.1\|2793041_2793503_-	M23 family metallopeptidase	A0A1P8D5Q3	Corynebacterium_phage	2.7e-43	66.7
WP_190242397.1\|2793629_2793767_-	hypothetical protein	NA	NA	NA	NA
WP_102031240.1\|2793853_2794255_-	hypothetical protein	A0A2P1JRG4	Mycobacterium_phage	7.7e-10	36.4
WP_059174470.1\|2794316_2794958_-	hypothetical protein	A0A0N7C8S3	Skermania_phage	3.2e-18	37.6
WP_059174469.1\|2794924_2795518_-	hypothetical protein	A0A0N6WG45	Skermania_phage	4.4e-46	45.7
WP_102031241.1\|2795514_2796132_-	hypothetical protein	A0A0N7CC98	Skermania_phage	3.7e-56	49.5
WP_059174467.1\|2796138_2796792_-	hypothetical protein	A0A0N7CD65	Skermania_phage	9.8e-31	37.8
WP_102031242.1\|2796793_2798467_-	hypothetical protein	A0A0N7CDI2	Skermania_phage	1.0e-95	53.6
WP_102031243.1\|2798499_2798886_-	hypothetical protein	A0A286MQD2	Mycobacterium_phage	2.5e-26	53.9
WP_059174464.1\|2798986_2800228_-	hypothetical protein	A0A0N7CBN2	Skermania_phage	1.9e-136	53.8
WP_102031244.1\|2800256_2806061_-	hypothetical protein	D4P802	Rhodococcus_phage	3.0e-155	46.1
WP_059174462.1\|2806091_2806301_-	hypothetical protein	NA	NA	NA	NA
WP_102031246.1\|2806297_2806762_-	hypothetical protein	F1B2Q3	Tsukamurella_phage	2.8e-19	50.6
WP_102031958.1\|2806827_2807175_-	hypothetical protein	D4P800	Rhodococcus_phage	4.6e-35	68.2
WP_102031247.1\|2807233_2807566_-	hypothetical protein	A0A1J0MDP6	Mycobacterium_phage	7.0e-09	38.2
WP_102031248.1\|2807567_2808095_-	hypothetical protein	F1B2Q0	Tsukamurella_phage	1.9e-48	55.2
WP_190242308.1\|2808091_2808808_-	hypothetical protein	D4P7Z7	Rhodococcus_phage	4.8e-71	54.7
WP_102031249.1\|2808916_2809744_+	acyltransferase	A0A160DCT9	Gordonia_phage	2.0e-28	41.5

DBSCAN-SWA_6

2814052 : 2842357

Mycobacterium_phage(34.78%)

capsid,integrase

attL 2806599:2806614|attR 2844020:2844035

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2806599:2806614	attL	NA	NA	NA	NA
WP_003938844.1\|2814052_2814868_-	hypothetical protein	A0A0N7CDA1	Skermania_phage	1.1e-108	70.4
WP_102031251.1\|2814942_2815317_-	hypothetical protein	G9FI12	Nocardia_phage	1.6e-06	32.7
WP_003938846.1\|2815504_2815780_-	hypothetical protein	NA	NA	NA	NA
WP_102031252.1\|2815795_2816164_-	hypothetical protein	D4P7Z1	Rhodococcus_phage	1.2e-09	51.4
WP_102031253.1\|2816175_2816952_-	hypothetical protein	G8I7Y1	Mycobacterium_phage	3.1e-47	43.9
WP_102031254.1\|2817071_2818814_-\|capsid	major capsid protein	F1B2P2	Tsukamurella_phage	3.2e-177	73.8
WP_059174448.1\|2818976_2819168_-	hypothetical protein	NA	NA	NA	NA
WP_102031255.1\|2819169_2821548_-	hypothetical protein	D4P7Y7	Rhodococcus_phage	1.0e-218	52.4
WP_102031256.1\|2821547_2823335_-	hypothetical protein	G8I7X7	Mycobacterium_phage	3.4e-134	49.8
WP_102031257.1\|2823506_2823728_-	hypothetical protein	NA	NA	NA	NA
WP_102031258.1\|2823732_2824059_-	hypothetical protein	W8ECD8	Mycobacterium_phage	9.3e-14	38.6
WP_102031259.1\|2824092_2825730_-	hypothetical protein	G8IBP3	Mycobacterium_phage	3.0e-161	55.9
WP_102031960.1\|2825732_2825975_-	hypothetical protein	A0A222ZH98	Arthrobacter_phage	3.3e-08	40.6
WP_102031260.1\|2826147_2826447_-	hypothetical protein	G8I4L2	Mycobacterium_phage	8.5e-06	43.3
WP_102031261.1\|2826652_2827024_-	hypothetical protein	NA	NA	NA	NA
WP_102031263.1\|2827202_2827730_-	hypothetical protein	A0A0R8V9Z3	Thermobifida_phage	3.2e-08	36.6
WP_102031264.1\|2827722_2828571_-	hypothetical protein	E0YQ62	Mycobacterium_phage	1.6e-17	35.6
WP_102031265.1\|2828946_2829318_-	hypothetical protein	G8I4J6	Mycobacterium_phage	3.2e-42	71.4
WP_102031266.1\|2829317_2829797_-	hypothetical protein	NA	NA	NA	NA
WP_145961951.1\|2829793_2830600_-	hypothetical protein	A0A2H4PF95	Gordonia_phage	8.4e-32	39.1
WP_102031267.1\|2831125_2831530_-	hypothetical protein	NA	NA	NA	NA
WP_102031268.1\|2831526_2831856_-	hypothetical protein	NA	NA	NA	NA
WP_102031269.1\|2831852_2832431_-	hypothetical protein	NA	NA	NA	NA
WP_102031270.1\|2832427_2832718_-	hypothetical protein	A0A2P1JY99	Gordonia_phage	1.8e-08	34.4
WP_102031271.1\|2832714_2833101_-	hypothetical protein	NA	NA	NA	NA
WP_102031272.1\|2833210_2833519_-	hypothetical protein	NA	NA	NA	NA
WP_059174425.1\|2833515_2833752_-	hypothetical protein	NA	NA	NA	NA
WP_059174424.1\|2833748_2834096_-	hypothetical protein	NA	NA	NA	NA
WP_059174423.1\|2834092_2834323_-	hypothetical protein	NA	NA	NA	NA
WP_190242309.1\|2834319_2834457_-	hypothetical protein	NA	NA	NA	NA
WP_102031274.1\|2834525_2835173_-	DNA polymerase III subunit epsilon	A0A0R8VDA1	Thermobifida_phage	1.7e-43	45.4
WP_102031275.1\|2835187_2836093_-	hypothetical protein	A0A1B3B1U8	Gordonia_phage	5.3e-91	66.8
WP_102031276.1\|2836089_2837235_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A2H4PEU5	Gordonia_phage	1.3e-49	40.5
WP_102031277.1\|2837357_2837648_-	hypothetical protein	NA	NA	NA	NA
WP_102031278.1\|2837716_2837983_-	helix-turn-helix transcriptional regulator	A0A0U4AZ39	Gordonia_phage	3.6e-24	66.7
WP_145961952.1\|2838198_2838819_+	hypothetical protein	A0A166XZM5	Gordonia_phage	2.2e-24	40.9
WP_102031279.1\|2838819_2839332_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_145961953.1\|2839328_2840471_+	hypothetical protein	NA	NA	NA	NA
WP_059174416.1\|2840598_2841036_+	hypothetical protein	A0A088FBM4	Mycobacterium_phage	5.0e-23	45.1
WP_102031281.1\|2841061_2842357_+\|integrase	site-specific integrase	G9FH48	Rhodococcus_phage	1.4e-153	67.1
2844020:2844035	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3843776 : 3902498

Gordonia_phage(27.59%)

transposase,capsid,portal,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102031478.1\|3843776_3844940_-\|transposase	transposase	A0A1D8ETH9	Propionibacterium_phage	4.6e-132	64.2
WP_026137579.1\|3845065_3845896_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_017679937.1\|3845975_3847046_+	OsmC family protein	NA	NA	NA	NA
WP_017679936.1\|3847066_3848056_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-17	35.7
WP_102031479.1\|3848052_3849039_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-18	29.8
WP_017679934.1\|3849035_3849941_-	ABC transporter permease	NA	NA	NA	NA
WP_026137578.1\|3849937_3850885_-	ABC transporter permease	NA	NA	NA	NA
WP_102031480.1\|3850938_3852474_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_102031481.1\|3852512_3854036_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_064065714.1\|3854086_3855631_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_102031482.1\|3855778_3856654_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_010596821.1\|3856675_3857107_-	PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_102031483.1\|3857111_3858143_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_017679926.1\|3858502_3858757_+	hypothetical protein	NA	NA	NA	NA
WP_003934612.1\|3858787_3859378_-	dCTP deaminase	I4AZP2	Saccharomonospora_phage	3.9e-79	75.5
WP_174824807.1\|3859469_3860287_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_040270216.1\|3860341_3861505_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_064065712.1\|3861545_3861923_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_102031484.1\|3862127_3863669_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.4e-120	54.0
WP_010596815.1\|3863695_3864313_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010596814.1\|3864403_3865225_+	DUF2236 domain-containing protein	NA	NA	NA	NA
WP_010596813.1\|3865175_3866453_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_102031485.1\|3867384_3868029_+	helix-turn-helix domain-containing protein	A0A1D8EW93	Mycobacterium_phage	7.2e-10	41.9
WP_102031486.1\|3868155_3868650_-	hypothetical protein	NA	NA	NA	NA
WP_190242426.1\|3868651_3869899_-	hypothetical protein	Q5ZGD1	Flavobacterium_phage	3.0e-20	43.0
WP_102031487.1\|3869903_3870278_-	hypothetical protein	NA	NA	NA	NA
WP_102031488.1\|3870351_3870618_-	hypothetical protein	A0A2H4J779	uncultured_Caudovirales_phage	1.6e-16	60.0
WP_102031489.1\|3870742_3871971_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	1.8e-86	55.8
WP_102031977.1\|3872008_3872959_-	glycoside hydrolase family 25 protein	A0A1S5VYA1	Rhodococcus_phage	2.3e-60	50.4
WP_102031490.1\|3873372_3873627_-	hypothetical protein	NA	NA	NA	NA
WP_102031491.1\|3873636_3874692_-	hypothetical protein	A0A222ZNG3	Mycobacterium_phage	7.2e-15	28.6
WP_174824807.1\|3874738_3875555_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_102031492.1\|3875579_3876629_-	hypothetical protein	A0A222ZM91	Mycobacterium_phage	5.8e-09	26.6
WP_190242328.1\|3876625_3876802_-	hypothetical protein	NA	NA	NA	NA
WP_102031493.1\|3876813_3878145_-	hypothetical protein	A0A0E3T897	Gordonia_phage	1.3e-66	36.2
WP_102031494.1\|3878138_3878963_-	hypothetical protein	NA	NA	NA	NA
WP_102031495.1\|3878981_3884018_-\|tail	phage tail tape measure protein	A0A1B3B020	Gordonia_phage	6.6e-58	41.6
WP_145961954.1\|3884064_3884481_-	hypothetical protein	NA	NA	NA	NA
WP_102031497.1\|3884487_3885159_-	hypothetical protein	A0A159B6I6	Gordonia_phage	2.2e-09	42.0
WP_102031498.1\|3885291_3885630_-	hypothetical protein	Q855G6	Mycobacterium_virus	2.5e-09	50.0
WP_102031499.1\|3885921_3886218_-	hypothetical protein	A0A1D8EX57	Mycobacterium_phage	4.0e-16	47.5
WP_145961955.1\|3886280_3887813_-	hypothetical protein	NA	NA	NA	NA
WP_102031500.1\|3888064_3888565_-	hypothetical protein	NA	NA	NA	NA
WP_145961956.1\|3888585_3888915_-	hypothetical protein	NA	NA	NA	NA
WP_102031501.1\|3888911_3889364_-	hypothetical protein	G9FH92	Rhodococcus_phage	6.0e-19	38.8
WP_102031502.1\|3889360_3889693_-	hypothetical protein	K4HYD6	Streptomyces_phage	9.8e-11	39.4
WP_145961958.1\|3889705_3890038_-	hypothetical protein	A0A142KB39	Gordonia_phage	3.8e-07	34.0
WP_102031504.1\|3890037_3890457_-	hypothetical protein	NA	NA	NA	NA
WP_102031505.1\|3890535_3891429_-	hypothetical protein	E5DV53	Deep-sea_thermophilic_phage	1.3e-46	38.1
WP_102031506.1\|3891469_3892231_-	hypothetical protein	NA	NA	NA	NA
WP_102031507.1\|3892323_3893436_-\|capsid	minor capsid protein	A0A159B6H5	Gordonia_phage	1.6e-52	38.8
WP_190242329.1\|3893459_3893624_-	hypothetical protein	NA	NA	NA	NA
WP_190242330.1\|3893643_3895227_-\|portal	phage portal protein	A0A162E1F1	Gordonia_phage	6.8e-86	37.3
WP_190242331.1\|3895238_3896525_-\|terminase	PBSX family phage terminase large subunit	G9FH82	Rhodococcus_phage	3.7e-82	40.7
WP_102031510.1\|3896521_3896947_-	helix-turn-helix domain-containing protein	A0A0R8V9Z3	Thermobifida_phage	5.4e-06	35.2
WP_145961959.1\|3897132_3897357_+	hypothetical protein	NA	NA	NA	NA
WP_102031511.1\|3898655_3899246_-	hypothetical protein	NA	NA	NA	NA
WP_102031512.1\|3899242_3899434_-	hypothetical protein	NA	NA	NA	NA
WP_102031978.1\|3899430_3899820_-	DUF3310 domain-containing protein	A0A088FRG2	Mycobacterium_phage	8.2e-25	67.4
WP_102031513.1\|3899930_3900299_-	hypothetical protein	NA	NA	NA	NA
WP_102031514.1\|3900295_3900820_-	3'-5' exoribonuclease	A0A097EVM2	Mycobacterium_phage	7.6e-34	47.3
WP_102031515.1\|3900816_3901128_-	thioredoxin family protein	NA	NA	NA	NA
WP_190242332.1\|3901124_3901679_-	hypothetical protein	A0A2D1GBB0	Mycobacterium_phage	2.5e-27	54.4
WP_190242333.1\|3901675_3901891_-	hypothetical protein	NA	NA	NA	NA
WP_190242334.1\|3901887_3902115_-	hypothetical protein	NA	NA	NA	NA
WP_102031517.1\|3902111_3902498_-	hypothetical protein	A0A0U3TFK9	Gordonia_phage	6.2e-25	47.4

DBSCAN-SWA_8

3911378 : 3918515

Gordonia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102031533.1\|3911378_3911807_-	hypothetical protein	A0A1B3AZJ2	Gordonia_phage	6.5e-15	39.1
WP_102031534.1\|3911883_3912330_-	single-stranded DNA-binding protein	A0A0E3XA19	Gordonia_phage	8.7e-39	62.1
WP_102031535.1\|3912466_3912682_-	hypothetical protein	NA	NA	NA	NA
WP_102031536.1\|3912678_3912993_-	glutaredoxin family protein	G9FGZ9	Rhodococcus_phage	1.1e-24	55.8
WP_190242337.1\|3912989_3913634_-	polymer-forming cytoskeletal protein	A0A0A7NP48	Lactobacillus_phage	2.3e-08	55.4
WP_145961962.1\|3913630_3913783_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_190242338.1\|3913779_3913998_-	hypothetical protein	NA	NA	NA	NA
WP_102031539.1\|3914302_3915748_-	DNA cytosine methyltransferase	A0A1B3AYU4	Gordonia_phage	3.3e-143	51.5
WP_190242339.1\|3915872_3916031_-	hypothetical protein	NA	NA	NA	NA
WP_102031540.1\|3916027_3916210_-	hypothetical protein	NA	NA	NA	NA
WP_102031541.1\|3916326_3916614_-	hypothetical protein	NA	NA	NA	NA
WP_190242340.1\|3916667_3916832_-	hypothetical protein	NA	NA	NA	NA
WP_102031542.1\|3917109_3917655_-	hypothetical protein	NA	NA	NA	NA
WP_145961963.1\|3917651_3918515_-	hypothetical protein	A0A142KAB1	Gordonia_phage	5.3e-24	32.8

DBSCAN-SWA_9

4975780 : 5029363

Tupanvirus(12.5%)

integrase,transposase,tRNA

attL 4997630:4997647|attR 5032823:5032840

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029547282.1\|4975780_4977352_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_010595489.1\|4977542_4978004_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_040273141.1\|4978190_4979105_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_010595491.1\|4979167_4979461_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_017681104.1\|4979483_4980041_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010595493.1\|4980107_4980464_+	hypothetical protein	NA	NA	NA	NA
WP_003936594.1\|4980466_4980622_-	hypothetical protein	NA	NA	NA	NA
WP_010595494.1\|4980769_4981114_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_102031798.1\|4981296_4981896_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_102031799.1\|4981965_4985265_-\|tRNA	bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	A0A2K9KZX5	Tupanvirus	9.6e-66	35.6
WP_010595497.1\|4985413_4986094_-	response regulator	NA	NA	NA	NA
WP_102031800.1\|4986090_4988625_-	sensor histidine kinase KdpD	NA	NA	NA	NA
WP_010595499.1\|4988632_4989292_-	potassium-transporting ATPase subunit C	NA	NA	NA	NA
WP_040273148.1\|4989297_4991388_-	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.9e-27	25.5
WP_017681112.1\|4991384_4993085_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_017681113.1\|4993092_4993191_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_010595502.1\|4993534_4994833_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_010595503.1\|4994902_4995256_-	HPF/RaiA family ribosome-associated protein	NA	NA	NA	NA
WP_017681115.1\|4995383_4997456_-	MMPL family transporter	NA	NA	NA	NA
WP_102031801.1\|4997530_4997950_+	winged helix DNA-binding protein	NA	NA	NA	NA
4997630:4997647	attL	NA	NA	NA	NA
WP_010595506.1\|4997987_4998731_-	anti-sigma factor	NA	NA	NA	NA
WP_102031802.1\|4998720_4999296_-	ECF RNA polymerase sigma factor SigK	NA	NA	NA	NA
WP_010595508.1\|4999464_5000094_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_040273155.1\|5000241_5000919_+	fasciclin domain-containing protein	NA	NA	NA	NA
WP_010595511.1\|5000942_5001524_+	lipocalin family protein	A0A1E1EXN3	Acanthamoeba_castellanii_mimivirus	2.2e-10	31.0
WP_190242353.1\|5001745_5003611_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.8e-21	25.8
WP_017681122.1\|5003668_5005210_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_102031803.1\|5005206_5006571_-	TIGR01777 family protein	NA	NA	NA	NA
WP_040273159.1\|5006809_5008174_-	deoxyribodipyrimidine photo-lyase	A0A2H4UV63	Bodo_saltans_virus	1.7e-56	29.2
WP_010595516.1\|5008244_5008469_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_010595517.1\|5008533_5008740_-	hypothetical protein	NA	NA	NA	NA
WP_017681126.1\|5008871_5009291_-	hypothetical protein	NA	NA	NA	NA
WP_040273161.1\|5009388_5009913_-	thioesterase family protein	NA	NA	NA	NA
WP_010595520.1\|5009925_5010420_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_026137856.1\|5010566_5011319_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010595522.1\|5011426_5011804_-	DUF5313 family protein	NA	NA	NA	NA
WP_102031804.1\|5011823_5013662_-	AMP-binding protein	A0A1V0SBX8	Catovirus	6.2e-38	22.2
WP_049904243.1\|5014224_5014980_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_049904242.1\|5014969_5016217_+\|transposase	transposase	NA	NA	NA	NA
WP_006946735.1\|5016244_5018308_-	recombinase family protein	NA	NA	NA	NA
WP_006946734.1\|5018322_5018556_-	hypothetical protein	NA	NA	NA	NA
WP_006946733.1\|5018719_5019196_-	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_044476541.1\|5019370_5019655_-	Y4bD/Y4pK family protein	NA	NA	NA	NA
WP_161800560.1\|5019732_5020581_+\|transposase	Mu transposase C-terminal domain-containing protein	NA	NA	NA	NA
WP_006946730.1\|5020571_5021600_+	ATP-binding protein	NA	NA	NA	NA
WP_006946728.1\|5021608_5022487_+	TniQ family protein	NA	NA	NA	NA
WP_006946726.1\|5022770_5023937_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_102031805.1\|5023938_5024955_+	hypothetical protein	NA	NA	NA	NA
WP_006946722.1\|5025100_5025562_+	cytochrome P450	V5UQK0	Mycobacterium_phage	1.8e-26	43.9
WP_006946719.1\|5025715_5027143_-	DUF4038 domain-containing protein	NA	NA	NA	NA
WP_096824248.1\|5028138_5029363_+\|transposase	IS3 family transposase	A0A160DCU2	Gordonia_phage	2.4e-86	54.7
5032823:5032840	attR	NA	NA	NA	NA

DBSCAN-SWA_10

5085457 : 5148752

Enterobacteria_phage(33.33%)

transposase,integrase

attL 5076015:5076074|attR 5136627:5139609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5076015:5076074	attL	NA	NA	NA	NA
WP_003939267.1\|5085457_5086843_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003939268.1\|5086842_5087652_+	AAA family ATPase	NA	NA	NA	NA
WP_006554627.1\|5087794_5088889_+	recombinase family protein	E5FFF9	Burkholderia_phage	5.7e-15	34.0
WP_006554626.1\|5089097_5089571_+	ATP-binding protein	NA	NA	NA	NA
WP_048774330.1\|5089978_5090902_-	HAD-IC family P-type ATPase	E4ZFI9	Streptococcus_phage	2.4e-59	44.5
WP_172603592.1\|5091400_5092201_+	peptidoglycan DD-metalloendopeptidase family protein	G9FHQ8	Rhodococcus_virus	4.6e-22	49.2
WP_081636958.1\|5092448_5093141_+	DUF3105 domain-containing protein	NA	NA	NA	NA
WP_006934828.1\|5093137_5093872_+	DUF305 domain-containing protein	NA	NA	NA	NA
WP_082061308.1\|5093980_5094220_+	DUF4229 domain-containing protein	NA	NA	NA	NA
WP_102031810.1\|5094241_5095480_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_006934831.1\|5095570_5096494_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_006934832.1\|5096539_5097100_-	copper resistance protein CopC	NA	NA	NA	NA
WP_006934833.1\|5097285_5097945_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_040273214.1\|5097986_5098589_+	vitamin K epoxide reductase family protein	NA	NA	NA	NA
WP_006934837.1\|5098658_5099279_-	hypothetical protein	NA	NA	NA	NA
WP_006934838.1\|5099370_5099904_-	hypothetical protein	NA	NA	NA	NA
WP_006934840.1\|5099932_5101699_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_006934841.1\|5101810_5102758_-	M56 family metallopeptidase	NA	NA	NA	NA
WP_040273202.1\|5102754_5103117_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
WP_006934843.1\|5103154_5103820_-	M23 family metallopeptidase	G3MBX9	Mycobacterium_phage	7.7e-23	50.0
WP_006934844.1\|5104188_5106180_-	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_006934845.1\|5106391_5107315_+	cation transporter	NA	NA	NA	NA
WP_006934846.1\|5107672_5107867_+	hypothetical protein	NA	NA	NA	NA
WP_044475839.1\|5107982_5109212_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_102031811.1\|5109493_5111191_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_081636985.1\|5111943_5112141_-	hypothetical protein	NA	NA	NA	NA
WP_006939070.1\|5112265_5112448_-	hypothetical protein	NA	NA	NA	NA
WP_040273253.1\|5112584_5112875_+	hypothetical protein	NA	NA	NA	NA
WP_006939069.1\|5113148_5113901_+	Abi family protein	NA	NA	NA	NA
WP_102031812.1\|5114498_5115746_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	4.8e-111	51.9
WP_006935277.1\|5117101_5117947_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.6e-41	39.6
WP_145961968.1\|5117954_5118671_-	hypothetical protein	NA	NA	NA	NA
WP_102031814.1\|5118667_5119291_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.4e-47	55.9
WP_003939268.1\|5119356_5120166_-	AAA family ATPase	NA	NA	NA	NA
WP_003939267.1\|5120165_5121551_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003939266.1\|5121552_5122155_-	recombinase family protein	A0A219YB42	Aeromonas_phage	2.1e-35	47.3
WP_185113669.1\|5122382_5122712_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_003939264.1\|5122708_5123305_+	cadmium resistance transporter	NA	NA	NA	NA
WP_102031815.1\|5123537_5124905_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_006554629.1\|5124983_5125976_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_006554630.1\|5125972_5126518_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_006554631.1\|5126514_5126841_-	hypothetical protein	NA	NA	NA	NA
WP_039958748.1\|5126863_5127247_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006554633.1\|5127368_5128805_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.5e-50	30.3
WP_006934806.1\|5128826_5129249_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_006554635.1\|5129319_5129961_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_006554636.1\|5130025_5130541_+	hypothetical protein	NA	NA	NA	NA
WP_040273213.1\|5130568_5133709_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.8e-186	38.6
WP_048774334.1\|5133861_5134794_+	cation-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.0e-20	30.1
WP_040269861.1\|5135663_5136623_-	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA
WP_006942279.1\|5136627_5138259_-	cytochrome c biogenesis protein ResB	NA	NA	NA	NA
WP_006942282.1\|5138255_5139062_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_180987068.1\|5139058_5139625_-	redoxin domain-containing protein	NA	NA	NA	NA
5136627:5139609	attR	NA	NA	NA	NA
WP_040273236.1\|5139672_5140302_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_081637022.1\|5140553_5141192_+	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_190242354.1\|5141532_5141952_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_102031462.1\|5141975_5143213_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_048773861.1\|5143724_5145371_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_102031817.1\|5146399_5147164_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-25	29.8
WP_102031818.1\|5147210_5148752_-\|transposase	IS21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024891

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024892

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

3. NZ_CP024890

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection