Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP025951 Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome 2 crisprs DEDDh,RT,DinG,cas3,WYL,csa3 0 0 12 0
NZ_CP025952 Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence 0 crisprs RT 0 0 2 0

Results visualization

1. NZ_CP025951
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025951_1 362915-363067 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025951_2 3081523-3081617 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 186 : 5457 6 Salmonella_phage(50.0%) holin NA
DBSCAN-SWA_2 335575 : 342481 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_3 383014 : 398760 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_4 1375342 : 1386230 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_5 1614503 : 1652969 56 uncultured_Caudovirales_phage(34.04%) integrase,terminase attL 1644082:1644096|attR 1650091:1650105
DBSCAN-SWA_6 1685902 : 1716946 41 Enterobacteria_phage(35.48%) transposase,holin,integrase attL 1685684:1685699|attR 1714252:1714267
DBSCAN-SWA_7 2079286 : 2164692 80 Salmonella_phage(47.92%) transposase,lysis,capsid,protease,tRNA,integrase,tail,head,portal,plate,terminase attL 2134812:2134830|attR 2164767:2164785
DBSCAN-SWA_8 2818236 : 2829889 13 Enterobacteria_phage(70.0%) integrase attL 2818686:2818700|attR 2841742:2841756
DBSCAN-SWA_9 3297893 : 3306010 8 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_10 4377199 : 4410457 33 uncultured_Caudovirales_phage(73.33%) capsid,protease,tRNA,integrase,tail,head,portal,terminase attL 4394807:4394824|attR 4410802:4410819
DBSCAN-SWA_11 5169722 : 5218866 61 Salmonella_phage(79.55%) transposase,lysis,capsid,tRNA,integrase,tail,portal,head,coat,plate,terminase attL 5169137:5169183|attR 5207492:5207538
DBSCAN-SWA_12 5323582 : 5361683 46 Salmonella_phage(36.59%) integrase,tail,terminase attL 5316917:5316931|attR 5347022:5347036
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP025952
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3143 : 52294 52 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_2 59739 : 160607 116 Escherichia_phage(37.84%) transposase,protease,integrase attL 114902:114961|attR 166601:167407
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage