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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP025703 Escherichia coli strain BH100N substr. MG2017 chromosome, complete genome 6 crisprs cas14j,DinG,cas3,DEDDh,csa3,RT,PD-DExK,WYL 1 6 8 1

Results visualization

1. NZ_CP025703
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_1 153607-153693 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_2 1036755-1036902 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_3 2479008-2479121 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_4 4369517-4369718 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_5 4430053-4430179 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP025703_6 4850590-4850729 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP025703.1 155130-155164 2 0.943

1. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to position: 155130-155164, mismatch: 2, identity: 0.943

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
cgccgcatccggcatgaacaaatcgcacgttgtca	Protospacer
**************.******* ************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198894-198928 2 0.943
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91403-91437 2 0.943
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 271-327 5 0.912
NZ_CP025703_2 2.2|1036843|32|NZ_CP025703|CRISPRCasFinder 1036843-1036874 32 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 83332-83363 8 0.75
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 215407-215441 9 0.743
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 225901-225935 9 0.743
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 216735-216769 9 0.743
NZ_CP025703_1 1.1|153633|35|NZ_CP025703|CRISPRCasFinder 153633-153667 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 197690-197724 9 0.743
NZ_CP025703_4 4.2|4369652|56|NZ_CP025703|PILER-CR 4369652-4369707 56 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14043 9 0.839
NZ_CP025703_4 4.2|4369652|56|NZ_CP025703|PILER-CR 4369652-4369707 56 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87116-87171 11 0.804
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12113-12164 11 0.788
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 272-323 11 0.788
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31252-31303 11 0.788
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30155-30211 12 0.789
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-99 13 0.772
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-98 13 0.772
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18328-18384 13 0.772
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-98 13 0.772
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-98 13 0.772
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208982-209033 13 0.75
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219476-219527 13 0.75
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210310-210361 13 0.75
NZ_CP025703_6 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder 4850634-4850685 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191265-191316 13 0.75
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87171 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229227-229283 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229328-229384 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229429-229485 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4170 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239721-239777 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239822-239878 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239923-239979 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4169 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230633-230689 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230734-230790 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230835-230891 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4169 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211603-211659 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211704-211760 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211805-211861 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4169 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7448 14 0.754
NZ_CP025703_5 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder 4430088-4430144 57 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84272 14 0.754
NZ_CP025703_4 4.1|4369553|63|NZ_CP025703|PILER-CR 4369553-4369615 63 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87177 15 0.762

1. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 2, identity: 0.943

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
cgccgcatccggcatgaacaacgcgcacgttgtca	Protospacer
**************.****** *************

2. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 2, identity: 0.943

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
cgccgcatccggcatgaacaacgcgcacgttgtca	Protospacer
**************.****** *************

3. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 5, identity: 0.912

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac-aactattgccgacct	CRISPR spacer
atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaaccgttaccgact-	Protospacer
****************************************** ***..**.*****. 

4. spacer 2.2|1036843|32|NZ_CP025703|CRISPRCasFinder matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 8, identity: 0.75

ttgccgcggatcctgtctgccaataatgacaa	CRISPR spacer
ctggacggcatcctgtctgccaattttgacaa	Protospacer
.**    * ***************  ******

5. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.743

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
agccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
 *************.************ *     .

6. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.743

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
agccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
 *************.************ *     .

7. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.743

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
agccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
 *************.************ *     .

8. spacer 1.1|153633|35|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.743

cgccgcatccggcacgaacaaagcgcacgttgtca	CRISPR spacer
agccgcatccggcatgaacaaagcgcaggaacaag	Protospacer
 *************.************ *     .

9. spacer 4.2|4369652|56|NZ_CP025703|PILER-CR matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.839

tacag-tgcccgatgcgacgctgccgcgtcttatcgggcctacaaa-agttctgaacc	CRISPR spacer
-acggatgcccgatgcgacgctggcgcgtcttatcgggcctacaaacggccccgaat-	Protospacer
 **.* ***************** ********************** .*..*.***. 

10. spacer 4.2|4369652|56|NZ_CP025703|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.804

tacagtgcccgatgcgacgctgccgcgtcttatcgggcctacaaaagttctgaacc----	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaa----tcaatcgctt	Protospacer
.**..****.************************.***********    * **.*    

11. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** *******.***************.   .*.

12. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************.***********.*. .*. *.* 

13. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************.***********..  .*. ***  

14. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.789

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa-ctattgccgacct	CRISPR spacer
tctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcacccgaac-	Protospacer
 ...****************** ************ ******** **..  **** * 

15. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

16. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

17. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

18. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

19. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***   

20. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

21. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

22. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

23. spacer 6.1|4850634|52|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.    

24. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaatcaatcgcttt	Protospacer
  *.******************.*********************   . ..** ..*

25. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

26. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

27. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

28. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

29. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

30. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

31. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

32. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

33. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

34. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

35. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

36. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

37. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

38. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

39. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

40. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**   

41. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**  

42. spacer 5.1|4430088|57|NZ_CP025703|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**  

43. spacer 4.1|4369553|63|NZ_CP025703|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.762

ttggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattggtgccgga	CRISPR spacer
tcggtgcacgatgcctgatgcgacgctgccgcgtcttatcaggcctaca--------aaa	Protospacer
*.************************** ********************        ..*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 134853 : 198761 56 Erysipelothrix_phage(10.0%) bacteriocin,tRNA,protease,transposase NA
DBSCAN-SWA_2 211980 : 273007 50 Emiliania_huxleyi_virus(11.11%) tRNA,protease,plate,transposase NA
DBSCAN-SWA_3 291527 : 327642 33 Streptococcus_phage(20.0%) protease,transposase NA
DBSCAN-SWA_4 1020517 : 1028240 10 uncultured_Caudovirales_phage(50.0%) integrase attL 1014504:1014518|attR 1026844:1026858
DBSCAN-SWA_5 1282273 : 1327376 60 Enterobacteria_phage(55.77%) tail,terminase,integrase,capsid,portal,head,tRNA,lysis attL 1274908:1274923|attR 1334553:1334568
DBSCAN-SWA_6 2769308 : 2845463 77 Salmonella_phage(44.23%) tail,holin,terminase,integrase,capsid,transposase,tRNA NA
DBSCAN-SWA_7 4149186 : 4160748 13 Enterobacteria_phage(88.89%) integrase attL 4149004:4149026|attR 4159638:4159660
DBSCAN-SWA_8 5022652 : 5089232 71 Enterobacteria_phage(45.83%) holin,tail,terminase,integrase,portal,protease,transposase,lysis attL 5010675:5010709|attR 5098083:5098117
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP025703.1|WP_000085117.1|136002_136191_+|hypothetical-protein 136002_136191_+ 62 aa aa NA NA NA 134853-198761 yes