CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027028	Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP027027	Shigella dysenteriae strain E670/74 chromosome, complete genome	7 crisprs	csa3,cas3,DEDDh,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	0	4	30	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11749 : 65092

Staphylococcus_phage(30.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001121440.1\|11749_12781_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000620627.1\|13133_13661_-	type III secretion apparatus protein OrgA/MxiK	NA	NA	NA	NA
WP_000621941.1\|13657_14383_-	SctJ family type III secretion inner membrane ring lipoprotein Mxi	NA	NA	NA	NA
WP_001106821.1\|14388_14682_-	type III secretion system inner rod protein MxiI	NA	NA	NA	NA
WP_032359554.1\|14694_14946_-	type III secretion system needle filament protein MxiH	NA	NA	NA	NA
WP_105242106.1\|14953_16069_-	type III secretion system protein MxiG	NA	NA	NA	NA
WP_000086110.1\|16077_16536_-	type III secretion system lytic transglycosylase IpgF	NA	NA	NA	NA
WP_000389733.1\|16535_16898_-	type III secretion system chaperone IpgE	NA	NA	NA	NA
WP_000548327.1\|16907_18524_-	type III secretion system effector inositol phosphate phosphatase	NA	NA	NA	NA
WP_000601047.1\|18837_20322_+	type III secretion system effector IcsB	NA	NA	NA	NA
WP_010921664.1\|20334_20724_+	type III secretion system chaperone IpgA	NA	NA	NA	NA
WP_001166528.1\|20739_21366_+	type III secretion effector IpgB1	NA	NA	NA	NA
WP_000055835.1\|21423_21891_+	SycD/LcrH family type III secretion system chaperone IpgC	NA	NA	NA	NA
WP_000552049.1\|21896_23639_+	type III secretion system translocon subunit IpaB	NA	NA	NA	NA
WP_000405476.1\|23658_24750_+	T3SS translocon subunit IpaC	NA	NA	NA	NA
WP_105242107.1\|24800_25799_+	type III secretion system needle tip complex protein IpaD	NA	NA	NA	NA
WP_000588811.1\|27711_27948_+	acyl carrier protein	NA	NA	NA	NA
WP_000227976.1\|28164_29094_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-51	42.6
WP_005059304.1\|30039_30819_-\|protease	type III secretion system effector cysteine protease IpaJ	NA	NA	NA	NA
WP_001102512.1\|31418_31556_-	hypothetical protein	NA	NA	NA	NA
WP_000255972.1\|32171_33176_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.3e-185	98.1
WP_005012122.1\|33366_34563_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001254932.1\|35749_36901_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_105242108.1\|37508_38963_-	T3SS effector OspC family protein	NA	NA	NA	NA
WP_001088287.1\|39330_40005_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_000631725.1\|40001_40349_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_032336446.1\|42179_42344_-	hypothetical protein	NA	NA	NA	NA
WP_011114751.1\|43245_43530_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_000501969.1\|43517_44003_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001254932.1\|44896_46048_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000850660.1\|49186_49927_-	PAP2 family phosphatase PhoN2	A0A1B1IUP6	uncultured_Mediterranean_phage	2.6e-11	28.9
WP_001046939.1\|50255_51122_-	type 3 secretion system effector OspB	A0A0P0ZCT1	Stx2-converting_phage	9.4e-29	32.7
WP_005000190.1\|52668_53616_-\|protease	omptin family outer membrane protease IcsP	NA	NA	NA	NA
WP_038341698.1\|55204_55861_+	type III secretion system effector cysteine methyltransferase OspZ	NA	NA	NA	NA
WP_000957853.1\|57319_57508_+	hypothetical protein	NA	NA	NA	NA
WP_105242110.1\|57517_58717_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001254932.1\|59940_61092_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000405248.1\|61429_61912_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_075330081.1\|61902_62205_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_000019158.1\|62476_62749_+	hypothetical protein	NA	NA	NA	NA
WP_088895425.1\|63863_65092_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP027027

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027027_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_1

1505206-1505352

Orphan

Consensus_repeat	Method
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_1

>merge|NZ_CP027027|1|1505206-1505352|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>NZ_CP027027|1|1|1505206-1505352|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTGTTGT
GTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_000397165.1\|1505388_1506900_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP027027.1\|WP_000648227.1\|1516480_1518574_+\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|224396
NZ_CP027027.1\|WP_171765178.1\|1496674_1497157_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027027.1\|WP_105241840.1\|1500484_1501681_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP027027.1\|WP_105241841.1\|1504591_1505035_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP027027.1\|WP_001059393.1\|1499788_1500292_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP027027.1\|WP_000132622.1\|1518620_1518962_-\|endoribonuclease-SymE	unknown	unknown	gnl\|CDD\|237442
NZ_CP027027.1\|WP_001295681.1\|1508266_1509349_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP027027.1\|WP_000002953.1\|1499326_1499743_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP027027.1\|WP_004996095.1\|1495859_1496312_+\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345
NZ_CP027027.1\|WP_005002606.1\|1511099_1512119_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP027027.1\|WP_000500712.1\|1494337_1495051_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_CP027027.1\|WP_000012942.1\|1498160_1499165_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP027027.1\|WP_005002622.1\|1495121_1495715_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP027027.1\|WP_000416407.1\|1501736_1504592_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP027027.1\|WP_000110085.1\|1519182_1520919_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341153
NZ_CP027027.1\|WP_005014094.1\|1515002_1516043_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP027027.1\|WP_000394268.1\|1516219_1516384_+\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP027027.1\|WP_004996108.1\|1509467_1510970_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP027027.1\|WP_000584114.1\|1507166_1508267_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_000397165.1\|1505388_1506900_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP027027.1\|WP_000648227.1\|1516480_1518574_+\|DUF262-domain-containing-protein	gnl\|CDD\|224396	COG1479, COG1479, Uncharacterized conserved protein [Function unknown].	2.11697e-73
NZ_CP027027.1\|WP_000110085.1\|1519182_1520919_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341153	cd17264, RMtype1_S_Eco3763I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Escherichia coli O69:H11 07-3763 S subunit (S.Eco3763I) TRD2-CR2. Escherichia coli O69:H11 07-3763 S subunit (S.Eco3763I) recognizes 5'... TACNNNNNNNRTRTC ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.26513e-96
NZ_CP027027.1\|WP_105241840.1\|1500484_1501681_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	1.21244e-148
NZ_CP027027.1\|WP_105241841.1\|1504591_1505035_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	1.82387e-65
NZ_CP027027.1\|WP_001059393.1\|1499788_1500292_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.6474e-18
NZ_CP027027.1\|WP_000132622.1\|1518620_1518962_-\|endoribonuclease-SymE	gnl\|CDD\|237442	PRK13605, PRK13605, endoribonuclease SymE; Provisional.	1.86224e-74
NZ_CP027027.1\|WP_001295681.1\|1508266_1509349_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP027027.1\|WP_000002953.1\|1499326_1499743_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69
NZ_CP027027.1\|WP_004996095.1\|1495859_1496312_+\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	5.0787e-70
NZ_CP027027.1\|WP_005002606.1\|1511099_1512119_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.25475e-168
NZ_CP027027.1\|WP_000584114.1\|1507166_1508267_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP027027.1\|WP_000012942.1\|1498160_1499165_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP027027.1\|WP_005002622.1\|1495121_1495715_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.04966e-10
NZ_CP027027.1\|WP_000416407.1\|1501736_1504592_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP027027.1\|WP_005014094.1\|1515002_1516043_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.5452e-109
NZ_CP027027.1\|WP_004996108.1\|1509467_1510970_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP027027.1\|WP_000394268.1\|1516219_1516384_+\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	8.17682e-11
NZ_CP027027.1\|WP_000500712.1\|1494337_1495051_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	2.19644e-150

>NZ_CP027027.1|WP_105241841.1|1504591_1505035_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLHTATWK
>NZ_CP027027.1|WP_000416407.1|1501736_1504592_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP027027.1|WP_105241840.1|1500484_1501681_+|DUF898-domain-containing-protein
MVQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIVSVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDTENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYLMCALVVRSGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL
>NZ_CP027027.1|WP_001059393.1|1499788_1500292_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGYTGHVDCEVRMLREL
>NZ_CP027027.1|WP_000002953.1|1499326_1499743_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NZ_CP027027.1|WP_000012942.1|1498160_1499165_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSSKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP027027.1|WP_171765178.1|1496674_1497157_+|hypothetical-protein
MMAHIKSSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIEITLSTFTTMGTRQGHTAIIFQQPDGSTNRYEGKSFERKDESSLHLITNKILACYQREANKEIALLLNVPQELNNPHDLNYSQVSCKNSVDSTITDLLEKPLNNALLAIRKEHLPYNALYV
>NZ_CP027027.1|WP_004996095.1|1495859_1496312_+|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP027027.1|WP_005002622.1|1495121_1495715_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAKCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILEE
>NZ_CP027027.1|WP_000500712.1|1494337_1495051_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NZ_CP027027.1|WP_000397165.1|1505388_1506900_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMESVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP027027.1|WP_000584114.1|1507166_1508267_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP027027.1|WP_001295681.1|1508266_1509349_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP027027.1|WP_004996108.1|1509467_1510970_-|DUF853-domain-containing-protein
MSEPRLIARTPDTELFLLPAMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAAEGTTSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLWSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGVQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_CP027027.1|WP_005002606.1|1511099_1512119_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAMPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARIKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
>NZ_CP027027.1|WP_005014094.1|1515002_1516043_-|PLP-dependent-aminotransferase-family-protein
MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEIIQWDQVLDMLVAHSDSSIVPLSKSTPDVETPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALEQWPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQHHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPERYHDKLLHMKYAISSFRLCPLII
>NZ_CP027027.1|WP_000394268.1|1516219_1516384_+|DUF1127-domain-containing-protein
MEFHENKAKTPFIRLVQFWQAVRRWRRQMQARRVLQQMSDERLRDIGLRREDVE
>NZ_CP027027.1|WP_000648227.1|1516480_1518574_+|DUF262-domain-containing-protein
MKATEARLLDFLKRSQQFVIPIYQRTYSWTEQQCRQLWDDIIRAGKRDDISAHFIGSVVYIEQGLYQVSGISPLLVIDGQQRLTTAMLLIEALSRHLGEDEVFDGFSAMKLRNYYLLNPYESGEKGFKLLLTETDKDSLLALIKQRPMPENYSHRIMENFTFFDEQIAKLGDDLIPLCRGLAKLLIVDVALNRGQDNPQLIFESMNSTGKALSQADLVRNFILMGLEPEHQTRLYEDHWRPMEVAFGQQGYSEYFDSFMRHYLTVKTGEIPRTDEVYEAFKLHARSQSVAEKGVDRLVEDIHIYAEYYCAMALGKESDKSLATAFQDLRELKVDVAYPFLLALYHDYKNDDLSHEDFLSIIRLIESYVFRRAVCAIPTNSLNKTFATFYKVINKEKYLESIQVHFMNLPSYRRFPNDDEFKRELKVRDLYNFRSRSYWLRRLENDKRRERVEEFTIEHIMPQNENLSAKWREELGSDWQRIHKELLHTLGNLTLTRYNSRYSDRPFAEKRDIEDGFKHSPLYLNIGLGQCEKWDEAAIHARADRLADVAVQVWQAPALPEEVLAVYRAQPENKTSYSLSDYPFLADGSHSRVLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGFSDLAQLPYIMGLIRQAFEKQMESALV
>NZ_CP027027.1|WP_000132622.1|1518620_1518962_-|endoribonuclease-SymE
MTDTHSIAQPFEAEVSPANNRQLTVSYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQSPAPEESELMQSLRQVCKLSARKQRQVQEFIGVIAGKQKVA
>NZ_CP027027.1|WP_000110085.1|1519182_1520919_-|restriction-endonuclease-subunit-S
MSVEKLIVDHMETWTSALQTRSTAGRGSSGKIDLYGIKKLRELILELAVRGKLVPQDPNDEPASELLKRIAAEKAELVKQGKIKKQKPLPEISEEEKPFELPEGWEWVRVADLMEVINGRAYKKHEMLQTGTPLLRVGNLFTSNEWYYSDLQLDENKYINNGDLIYAWSASFGPFIWTGEKVIYHYHIWKLNLFAEEYSNKYFIHDFLLSITDKIKSQGNGIAMLHMTKEKMEQQIIALPPINEQQQIVRKIRELTVLCDQLEQQSLTSLDAHQQLVETLLGTLTDSQNAKELAENWARISEHFDTLFTTEASVDALKQTILQLAVMGKLVPQDPNDEPASELLKRIAQEKAQLVKEGKIKKQKPLPPISDEEKPFELPEGWEWCKFGLTSEFINGDRGSNYPNKNEYVSQGIPWINTGHIEKNGTLTVTEMNFITEGKFNELRSGKIQKGDLVYCLRGATFGKTAFVTPYETGAIASSLMIIRPFITEMGGYIYNYLTSPFGRSQIYRFDNGSAQPNLSANSVMLYSFPCPPLTEQYRIFSQVGLLHELCDKLKTRIKTAQQTQLHLADALTNAAIN

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Crispr_ID: NZ_CP027027_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_2

1660069-1660184

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_2

>merge|NZ_CP027027|2|1660069-1660184|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>NZ_CP027027|2|2|1660069-1660184|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_001200573.1\|1652207_1653023_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP027027.1\|WP_000746157.1\|1649598_1651953_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP027027.1\|WP_105241847.1\|1653810_1656717_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP027027.1\|WP_001248770.1\|1670712_1670844_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP027027.1\|WP_000035653.1\|1656882_1659234_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP027027.1\|WP_000042383.1\|1673986_1675078_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_CP027027.1\|WP_001295536.1\|1667821_1668805_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP027027.1\|WP_000818228.1\|1671967_1672573_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP027027.1\|WP_000241259.1\|1647271_1648261_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP027027.1\|WP_000610901.1\|1646073_1646451_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP027027.1\|WP_000257196.1\|1645218_1646067_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP027027.1\|WP_004996763.1\|1668968_1670624_-\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP027027.1\|WP_000525191.1\|1653139_1653799_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP027027.1\|WP_001065381.1\|1646453_1647275_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP027027.1\|WP_000916302.1\|1665553_1666252_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP027027.1\|WP_000235710.1\|1666235_1667846_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NZ_CP027027.1\|WP_000951760.1\|1661773_1663417_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP027027.1\|WP_105241848.1\|1664719_1665484_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP027027.1\|WP_001140652.1\|1672583_1673984_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP027027.1\|WP_000888675.1\|1659308_1660004_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_001200573.1\|1652207_1653023_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
NZ_CP027027.1\|WP_000746157.1\|1649598_1651953_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP027027.1\|WP_105241847.1\|1653810_1656717_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP027027.1\|WP_001248770.1\|1670712_1670844_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
NZ_CP027027.1\|WP_000035653.1\|1656882_1659234_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP027027.1\|WP_000042383.1\|1673986_1675078_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_CP027027.1\|WP_001295536.1\|1667821_1668805_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP027027.1\|WP_000818228.1\|1671967_1672573_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	8.10007e-143
NZ_CP027027.1\|WP_000241259.1\|1647271_1648261_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP027027.1\|WP_000610901.1\|1646073_1646451_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP027027.1\|WP_000257196.1\|1645218_1646067_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP027027.1\|WP_004996763.1\|1668968_1670624_-\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP027027.1\|WP_000525191.1\|1653139_1653799_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.34446e-158
NZ_CP027027.1\|WP_001065381.1\|1646453_1647275_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
NZ_CP027027.1\|WP_000916302.1\|1665553_1666252_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	1.15157e-163
NZ_CP027027.1\|WP_000235710.1\|1666235_1667846_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NZ_CP027027.1\|WP_000951760.1\|1661773_1663417_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP027027.1\|WP_105241848.1\|1664719_1665484_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.8115e-48
NZ_CP027027.1\|WP_001140652.1\|1672583_1673984_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP027027.1\|WP_000888675.1\|1659308_1660004_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	1.52738e-177

>NZ_CP027027.1|WP_000888675.1|1659308_1660004_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTSTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWKTGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP027027.1|WP_000035653.1|1656882_1659234_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNSWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NZ_CP027027.1|WP_105241847.1|1653810_1656717_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAHSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NZ_CP027027.1|WP_000525191.1|1653139_1653799_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKRSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NZ_CP027027.1|WP_001200573.1|1652207_1653023_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NZ_CP027027.1|WP_000746157.1|1649598_1651953_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDNKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>NZ_CP027027.1|WP_000241259.1|1647271_1648261_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NZ_CP027027.1|WP_001065381.1|1646453_1647275_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NZ_CP027027.1|WP_000610901.1|1646073_1646451_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NZ_CP027027.1|WP_000257196.1|1645218_1646067_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDMGEGEAVAS
>NZ_CP027027.1|WP_000951760.1|1661773_1663417_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDALNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAE
>NZ_CP027027.1|WP_105241848.1|1664719_1665484_+|DedA-family-protein
MQALLEYFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILIGRFVGPTRPLVPMVAGMLDLPVAKFITPSIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>NZ_CP027027.1|WP_000916302.1|1665553_1666252_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMMFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARHMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHNVEDAARIATRSVVVADGRIAWQGKTEELLSGKASASALLGIKG
>NZ_CP027027.1|WP_000235710.1|1666235_1667846_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQVLSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIDLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NZ_CP027027.1|WP_001295536.1|1667821_1668805_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NZ_CP027027.1|WP_004996763.1|1668968_1670624_-|DNA-binding-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANKQVRDWVSYVLSPTNLVYFAEEQHQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NZ_CP027027.1|WP_001248770.1|1670712_1670844_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>NZ_CP027027.1|WP_000818228.1|1671967_1672573_-|3-isopropylmalate-dehydratase-small-subunit
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
>NZ_CP027027.1|WP_001140652.1|1672583_1673984_-|3-isopropylmalate-dehydratase-large-subunit
MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK
>NZ_CP027027.1|WP_000042383.1|1673986_1675078_-|3-isopropylmalate-dehydrogenase
MSKNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVAEGV

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Crispr_ID: NZ_CP027027_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_3

3251573-3251696

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_3

>merge|NZ_CP027027|3|3251573-3251696|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP027027|3|3|3251573-3251696|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_000493964.1\|3254895_3255537_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP027027.1\|WP_039071909.1\|3260847_3262023_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP027027.1\|WP_000190982.1\|3259268_3260294_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP027027.1\|WP_001297805.1\|3246432_3247071_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP027027.1\|WP_105241949.1\|3252010_3253267_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP027027.1\|WP_000212657.1\|3251132_3251438_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP027027.1\|WP_000528345.1\|3243005_3243215_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP027027.1\|WP_000648420.1\|3240489_3240726_-\|murein-lipoprotein-Lpp	unknown	unknown	gnl\|CDD\|185294
NZ_CP027027.1\|WP_000007272.1\|3262168_3262750_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP027027.1\|WP_004999490.1\|3241036_3242449_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP027027.1\|WP_000587548.1\|3248577_3249390_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP027027.1\|WP_000098904.1\|3255576_3256725_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP027027.1\|WP_000102278.1\|3260592_3260682_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP027027.1\|WP_001273528.1\|3244317_3246420_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP027027.1\|WP_001182360.1\|3257015_3258227_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP027027.1\|WP_000269501.1\|3258339_3259272_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP027027.1\|WP_048816394.1\|3247134_3247803_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP027027.1\|WP_001070230.1\|3243670_3244297_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP027027.1\|WP_001174942.1\|3253307_3254681_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP027027.1\|WP_000817092.1\|3239421_3240426_+\|L,D-transpeptidase-LdtE	unknown	unknown	gnl\|CDD\|182294

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_000493964.1\|3254895_3255537_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	1.58805e-121
NZ_CP027027.1\|WP_039071909.1\|3260847_3262023_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	2.65711e-96
NZ_CP027027.1\|WP_000190982.1\|3259268_3260294_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP027027.1\|WP_001297805.1\|3246432_3247071_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.93584e-120
NZ_CP027027.1\|WP_105241949.1\|3252010_3253267_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP027027.1\|WP_000212657.1\|3251132_3251438_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP027027.1\|WP_000528345.1\|3243005_3243215_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	1.19989e-33
NZ_CP027027.1\|WP_000648420.1\|3240489_3240726_-\|murein-lipoprotein-Lpp	gnl\|CDD\|185294	PRK15396, PRK15396, major outer membrane lipoprotein.	2.83509e-37
NZ_CP027027.1\|WP_004999490.1\|3241036_3242449_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP027027.1\|WP_000587548.1\|3248577_3249390_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.69112e-174
NZ_CP027027.1\|WP_000098904.1\|3255576_3256725_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP027027.1\|WP_000007272.1\|3262168_3262750_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	8.40877e-137
NZ_CP027027.1\|WP_001273528.1\|3244317_3246420_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP027027.1\|WP_001182360.1\|3257015_3258227_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP027027.1\|WP_000269501.1\|3258339_3259272_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP027027.1\|WP_048816394.1\|3247134_3247803_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	1.87013e-74
NZ_CP027027.1\|WP_001070230.1\|3243670_3244297_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP027027.1\|WP_001174942.1\|3253307_3254681_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP027027.1\|WP_000817092.1\|3239421_3240426_+\|L,D-transpeptidase-LdtE	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	1.81518e-85

>NZ_CP027027.1|WP_000212657.1|3251132_3251438_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP027027.1|WP_000587548.1|3248577_3249390_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLAPDPGEIPFCSQFARSDDHARIDCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC
>NZ_CP027027.1|WP_048816394.1|3247134_3247803_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGSVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP027027.1|WP_001297805.1|3246432_3247071_+|YdhW-family-putative-oxidoreductase-system-protein
MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP027027.1|WP_001273528.1|3244317_3246420_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_CP027027.1|WP_001070230.1|3243670_3244297_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP027027.1|WP_000528345.1|3243005_3243215_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTVLANKRIQRSELEKQAMETVINALVK
>NZ_CP027027.1|WP_004999490.1|3241036_3242449_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPSVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP027027.1|WP_000648420.1|3240489_3240726_-|murein-lipoprotein-Lpp
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
>NZ_CP027027.1|WP_000817092.1|3239421_3240426_+|L,D-transpeptidase-LdtE
MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTLVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
>NZ_CP027027.1|WP_105241949.1|3252010_3253267_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLIEGELIVEAGGRSENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTAKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP027027.1|WP_001174942.1|3253307_3254681_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>NZ_CP027027.1|WP_000493964.1|3254895_3255537_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDYMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYIMYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQTVVDTVERVLAARENAMNQPGTEA
>NZ_CP027027.1|WP_000098904.1|3255576_3256725_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFNRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFSYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP027027.1|WP_001182360.1|3257015_3258227_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNHGNAEVAHSESH
>NZ_CP027027.1|WP_000269501.1|3258339_3259272_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP027027.1|WP_000190982.1|3259268_3260294_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP027027.1|WP_000102278.1|3260592_3260682_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP027027.1|WP_039071909.1|3260847_3262023_+|MFS-transporter
MKINYPLLALALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATTFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPAVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVTGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP027027.1|WP_000007272.1|3262168_3262750_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEDKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNTGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP027027_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_4

3884625-3884758

Orphan

Consensus_repeat	Method
TGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_4

>merge|NZ_CP027027|4|3884625-3884758|CRISPRCasFinder
TGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACA

>NZ_CP027027|4|4|3884625-3884758|CRISPRCasFinder
TGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACA	AGACCCGAGCACAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTCAG
TGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_105242007.1\|3880661_3882056_-\|colanic-acid-biosynthesis-protein-WcaM	unknown	unknown	gnl\|CDD\|182253
NZ_CP027027.1\|WP_000183130.1\|3886319_3887714_-\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|182254
NZ_CP027027.1\|WP_105242006.1\|3876894_3878001_-\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
NZ_CP027027.1\|WP_000048190.1\|3893440_3894562_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_CP027027.1\|WP_000479826.1\|3891990_3892470_-\|GDP-mannose-mannosyl-hydrolase	unknown	unknown	gnl\|CDD\|237966
NZ_CP027027.1\|WP_000079285.1\|3889331_3890768_-\|mannose-1-phosphate-guanyltransferase	unknown	unknown	gnl\|CDD\|185357
NZ_CP027027.1\|WP_001296216.1\|3887768_3889139_-\|colanic-acid-biosynthesis-phosphomannomutase-CpsG	unknown	unknown	gnl\|CDD\|185312
NZ_CP027027.1\|WP_050517607.1\|3875965_3876898_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133028
NZ_CP027027.1\|WP_033560993.1\|3879593_3880487_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalF	unknown	unknown	gnl\|CDD\|182252
NZ_CP027027.1\|WP_105242008.1\|3883283_3884564_-\|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK	unknown	unknown	gnl\|CDD\|188521
NZ_CP027027.1\|WP_033560997.1\|3874003_3875176_-\|O170-family-O-antigen-polymerase	unknown	unknown	unknown
NZ_CP027027.1\|WP_071666124.1\|3882066_3883287_-\|colanic-acid-biosynthesis-glycosyltransferase-WcaL	unknown	unknown	gnl\|CDD\|188520
NZ_CP027027.1\|WP_001153581.1\|3894587_3895136_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|188523
NZ_CP027027.1\|WP_000699721.1\|3890770_3891994_-\|colanic-acid-biosynthesis-fucosyltransferase-WcaI	unknown	unknown	gnl\|CDD\|188522
NZ_CP027027.1\|WP_000927066.1\|3895151_3895898_-\|colanic-acid-biosynthesis-glycosyltransferase-WcaE	unknown	unknown	gnl\|CDD\|182218
NZ_CP027027.1\|WP_033560998.1\|3873165_3874002_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_CP027027.1\|WP_033560994.1\|3878012_3879260_-\|O170-family-O-antigen-flippase	unknown	unknown	gnl\|CDD\|240533
NZ_CP027027.1\|WP_071666127.1\|3892472_3893438_-\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_CP027027.1\|WP_071666121.1\|3875175_3875982_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP027027.1\|WP_032191945.1\|3884839_3886318_-\|colanic-acid-undecaprenyl-disphosphate-flippase-WzxC	unknown	unknown	gnl\|CDD\|236697

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_105242007.1\|3880661_3882056_-\|colanic-acid-biosynthesis-protein-WcaM	gnl\|CDD\|182253	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional.	0
NZ_CP027027.1\|WP_000183130.1\|3886319_3887714_-\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|182254	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional.	0
NZ_CP027027.1\|WP_000079285.1\|3889331_3890768_-\|mannose-1-phosphate-guanyltransferase	gnl\|CDD\|185357	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional.	0
NZ_CP027027.1\|WP_000479826.1\|3891990_3892470_-\|GDP-mannose-mannosyl-hydrolase	gnl\|CDD\|237966	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase.	2.91436e-117
NZ_CP027027.1\|WP_000048190.1\|3893440_3894562_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP027027.1\|WP_001296216.1\|3887768_3889139_-\|colanic-acid-biosynthesis-phosphomannomutase-CpsG	gnl\|CDD\|185312	PRK15414, PRK15414, phosphomannomutase.	0
NZ_CP027027.1\|WP_050517607.1\|3875965_3876898_-\|glycosyltransferase	gnl\|CDD\|133028	cd04185, GT_2_like_b, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.03601e-55
NZ_CP027027.1\|WP_033560993.1\|3879593_3880487_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0
NZ_CP027027.1\|WP_105242008.1\|3883283_3884564_-\|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK	gnl\|CDD\|188521	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK. This gene is the pyruvyl transferase involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP027027.1\|WP_105242006.1\|3876894_3878001_-\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	0
NZ_CP027027.1\|WP_071666124.1\|3882066_3883287_-\|colanic-acid-biosynthesis-glycosyltransferase-WcaL	gnl\|CDD\|188520	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP027027.1\|WP_001153581.1\|3894587_3895136_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|188523	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. This acetyltransferase is believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit).	1.0353e-131
NZ_CP027027.1\|WP_000699721.1\|3890770_3891994_-\|colanic-acid-biosynthesis-fucosyltransferase-WcaI	gnl\|CDD\|188522	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI. This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species.	0
NZ_CP027027.1\|WP_000927066.1\|3895151_3895898_-\|colanic-acid-biosynthesis-glycosyltransferase-WcaE	gnl\|CDD\|182218	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE.	0
NZ_CP027027.1\|WP_033560998.1\|3873165_3874002_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	9.21769e-19
NZ_CP027027.1\|WP_033560994.1\|3878012_3879260_-\|O170-family-O-antigen-flippase	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.37109e-66
NZ_CP027027.1\|WP_071666127.1\|3892472_3893438_-\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP027027.1\|WP_071666121.1\|3875175_3875982_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	6.65259e-09
NZ_CP027027.1\|WP_032191945.1\|3884839_3886318_-\|colanic-acid-undecaprenyl-disphosphate-flippase-WzxC	gnl\|CDD\|236697	PRK10459, PRK10459, MOP flippase family protein.	0

>NZ_CP027027.1|WP_105242008.1|3883283_3884564_-|colanic-acid-biosynthesis-pyruvyl-transferase-WcaK
MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMSIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK
>NZ_CP027027.1|WP_071666124.1|3882066_3883287_-|colanic-acid-biosynthesis-glycosyltransferase-WcaL
MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACCQLKEQGIAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQQVINRELASLLQAL
>NZ_CP027027.1|WP_105242007.1|3880661_3882056_-|colanic-acid-biosynthesis-protein-WcaM
MPSKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGYTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEEGGSMHNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTISHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNNIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAMNESGQSSVDIDRINHHIVNVEKINFRLPERRE
>NZ_CP027027.1|WP_033560993.1|3879593_3880487_-|UTP--glucose-1-phosphate-uridylyltransferase-GalF
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMMMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE
>NZ_CP027027.1|WP_033560994.1|3878012_3879260_-|O170-family-O-antigen-flippase
MKLNTTLNKNILYLAVVQGSSYILPLITFPYLVRVLGPELFGVLGFCQASMQYLVLLTDYGFNWTATQQVAKNKKDIEKLTRIFWSVFFAKIFLASLAFIFLAACCFLIEKYKELWVVLFSFSPLVLGNVIYPVWFFQGMEKMKWITICTITARCLVIPLTFIFVKNGQDVWVAALIQGAVNLLAGLMGLCLIRKKRWVDTIIVDYNDIKQCLKDGWHVFISTSAISLYTTSTTVILGFVSGPIAVGYFNVANTIRNAAQGLLNPITQAIYPRINAMYDSDYPQAILLIKKTLRYVGALALLGSIFLYMLAPTIINIGVGYDYEQAISILRWMSFLPFIIVLSNIFGVQTMLVHNFKKEFSRILVISGVTNLIIIYPLIRLFSGDGAAISLLITELMVSTLMYLFLRSKKIHLIY
>NZ_CP027027.1|WP_105242006.1|3876894_3878001_-|UDP-galactopyranose-mutase
MYDYLIVGAGLFGAVCAHELNKKGKKTLVIDRRDHIAGNAYTENNDGIQVHKYGAHIFHTNDKQIWEYVNSFVEFNRFTNSPLASYKNKLYNLPFNMNTFYQLWGVKTPTDAIDIINEQRKVLNGKVPSNLEEKAISLVGYDIYEKLIKGYTEKQWGRKATDLPAFIINRLPVRFTFDNNYFSDRYQGIPIGGYTNLVAKMLEGVEVNLGLDFLKDKEYYSKLAKKIIFTGPIDEFFDYCFGMLEYRSLRFETETLDIDNFQGNAVINYTESTVPYTRIIEHKHFDPVETLHTVITKEYPAEWCKGDEPYYPVNDVKNMSLFKKYKELADKSNVIFGGRLGEYKYYDMHQVIRAALNCSNALIESDAK
>NZ_CP027027.1|WP_050517607.1|3875965_3876898_-|glycosyltransferase
MIKKKVIAIIVTFNRKNYLLRTINSLYQQTYKVDEIICVDNCSTDGTQKYLLDNDIIGRKNFHYYNTGANLGGAGGFKYGIDCLKDFEYEHVWLMDDDVELESNCLEILISSDHSSKGIVQPTRYYEDGEFFSYDYKYFNFKNPLREFKLGRVTSEDIENNESIKIAAVPFEGPLIASDVINAIGNVNDEYFIIADDTDYSIRASRAGFYCFLIPEAKLKRLIKPCSGQDPSWKVFFFHRNVTLVDKYYAPKYVLYIRACVRVMRYVITVSKRKKTISNFVAMIHGVLAAMKNDITNNITDIQKKYADKK
>NZ_CP027027.1|WP_071666121.1|3875175_3875982_-|glycosyltransferase
MQIKNNINDLTIAISTYGERIVNAKKIALEFSRNGFRVDIIHQADNPDIIEEEIIDNKQIRYFYQNSKGVTKSRNYAIDVCTTKYIWFMDDDITFDYDNIHQLYGVLKKINCDNVSVCLTRIKDENGQPRKKYPQSGKIYNKRKIISVGTIEIIADATFLKRNDIKFDENFGAGAAYPVGDEALFLNDVLDSNGSIYHFDLYFLFHPKDSSGIYRSKLHFYSKGIVFRRLYGVIGLFYILYLILFRFNFFKEVSSLYLLKGYIVGGRR
>NZ_CP027027.1|WP_033560997.1|3874003_3875176_-|O170-family-O-antigen-polymerase
MRNILNSTIGIFIVFTIFFPLSPFVFSSGNAGALTTICSIIIIFLLLQQKINVTNNLYMLLFPVLLSFIISALYWQEIMLLNYPKYLIFSIIIVSLLQKNIVYIIGKYSTFVIVFALCCAVIGFIYAAIGGSAIYTITNPNGREFYFYLTTFTVTNYSGFIRPSAFFDEPGALSFYICFVVMLREILWPRKRALNFALLAFGIVTLSLAHIVFTILYIIYCLITKPTTKLIVGLVIILILSFVFLAVLPNKDVVFEYLISRSSSDTDGQGRSALLQAAIDTLQNAGVGLYIFGIDSNCLVNYDEACRYIYPRMGENILSPVVFGGLLTSWLFYFSYIYVGYKSLRKFIPNFIIFSFLLLYLQRPYIYLLSYSFMFMIALRLSIGFFDKEK
>NZ_CP027027.1|WP_033560998.1|3873165_3874002_-|glycosyltransferase-family-2-protein
MSSRPLIDVVITSYNRLNLLLLALESVLFQKAHVNTIIIVDDNSSFTKDDFFDKAKKIIENDNTEIIFHKNDKNYGACYCRNLGANLSKAELIAFLDDDDSWDPNHLNSLVDCFHEHVVLAYSGKNIINYQTGKIRRSLSKIQDDNQYEQMLRKNYPGSTSSILVKKSALMAVNGFDVSLPAIQDYDFYLRICRLGLLKSSGMYTLNYRNDTPLKITNQLQKARAAYNIIIQKYHGRERMILNRTIYKQNIIKCIRYFDFIYLFKFTRDFINFIVEWR
>NZ_CP027027.1|WP_032191945.1|3884839_3886318_-|colanic-acid-undecaprenyl-disphosphate-flippase-WzxC
MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCVAVFLLSDAIGDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTVVSAHFWPLAMTAIFGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLAVQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG
>NZ_CP027027.1|WP_000183130.1|3886319_3887714_-|undecaprenyl-phosphate-glucose-phosphotransferase
MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY
>NZ_CP027027.1|WP_001296216.1|3887768_3889139_-|colanic-acid-biosynthesis-phosphomannomutase-CpsG
MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE
>NZ_CP027027.1|WP_000079285.1|3889331_3890768_-|mannose-1-phosphate-guanyltransferase
MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV
>NZ_CP027027.1|WP_000699721.1|3890770_3891994_-|colanic-acid-biosynthesis-fucosyltransferase-WcaI
MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQRRWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVAQLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADVDALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTLDKENVLRQFINDIRG
>NZ_CP027027.1|WP_000479826.1|3891990_3892470_-|GDP-mannose-mannosyl-hydrolase
MFLRQEDFATVVRSTPLVSLDFIAENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVAEEDLILPDEQHDDYRWLTPDALLASNDVHANSRAYFLAEKRAGVPGL
>NZ_CP027027.1|WP_071666127.1|3892472_3893438_-|GDP-L-fucose-synthase
MSKQRIFIAGHRGMVGSAITRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENRDRFRG
>NZ_CP027027.1|WP_000048190.1|3893440_3894562_-|GDP-mannose-4,6-dehydratase
MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES
>NZ_CP027027.1|WP_001153581.1|3894587_3895136_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MQDLSGFSVPKGFRGGNAIKVQLWWAVQATLFAWSPQVLYRWRAFLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDEVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE
>NZ_CP027027.1|WP_000927066.1|3895151_3895898_-|colanic-acid-biosynthesis-glycosyltransferase-WcaE
MLLSIITVAFRNLEGIVKTHASLAHLAQAEDISFEWIVVDGGSNDGTREYLENLNGIFNLRFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQDAANFVRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSKTKALYNKS

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Crispr_ID: NZ_CP027027_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_5

4204527-4204653

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_5

>merge|NZ_CP027027|5|4204527-4204653|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP027027|5|5|4204527-4204653|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_001121440.1\|4207004_4208036_+\|IS630-like-element-IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP027027.1\|WP_001281263.1\|4195296_4197924_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP027027.1\|WP_000990758.1\|4198070_4198793_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	unknown	unknown	gnl\|CDD\|235350
NZ_CP027027.1\|WP_001075164.1\|4202190_4204476_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP027027.1\|WP_001225855.1\|4185908_4186685_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP027027.1\|WP_001209884.1\|4212745_4214005_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP027027.1\|WP_000772513.1\|4208415_4209492_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP027027.1\|WP_000786549.1\|4184650_4185835_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP027027.1\|WP_000301055.1\|4206147_4206798_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP027027.1\|WP_000857259.1\|4211127_4212756_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP027027.1\|WP_000135037.1\|4205839_4206094_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP027027.1\|WP_000948716.1\|4209496_4210855_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP027027.1\|WP_000339065.1\|4182650_4183301_+\|acetate-CoA-transferase-subunit-beta	unknown	unknown	gnl\|CDD\|188219
NZ_CP027027.1\|WP_001104574.1\|4186689_4188339_-\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP027027.1\|WP_000850539.1\|4181988_4182651_+\|acetate-CoA-transferase-subunit-alpha	unknown	unknown	gnl\|CDD\|182146
NZ_CP027027.1\|WP_000332036.1\|4204709_4205840_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP027027.1\|WP_105242035.1\|4214001_4215192_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP027027.1\|WP_105242036.1\|4215384_4216335_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP027027.1\|WP_000580284.1\|4183297_4184620_+\|TIGR00366-family-protein	unknown	unknown	gnl\|CDD\|280776
NZ_CP027027.1\|WP_000012339.1\|4193459_4195148_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_001121440.1\|4207004_4208036_+\|IS630-like-element-IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.6698e-16
NZ_CP027027.1\|WP_001281263.1\|4195296_4197924_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP027027.1\|WP_000990758.1\|4198070_4198793_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	2.96067e-171
NZ_CP027027.1\|WP_001075164.1\|4202190_4204476_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP027027.1\|WP_001225855.1\|4185908_4186685_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.30839e-153
NZ_CP027027.1\|WP_001209884.1\|4212745_4214005_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP027027.1\|WP_000772513.1\|4208415_4209492_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP027027.1\|WP_000786549.1\|4184650_4185835_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP027027.1\|WP_000301055.1\|4206147_4206798_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	3.35138e-158
NZ_CP027027.1\|WP_000857259.1\|4211127_4212756_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP027027.1\|WP_000135037.1\|4205839_4206094_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.9578e-52
NZ_CP027027.1\|WP_000948716.1\|4209496_4210855_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP027027.1\|WP_000339065.1\|4182650_4183301_+\|acetate-CoA-transferase-subunit-beta	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	8.86317e-113
NZ_CP027027.1\|WP_001104574.1\|4186689_4188339_-\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.11187e-125
NZ_CP027027.1\|WP_000850539.1\|4181988_4182651_+\|acetate-CoA-transferase-subunit-alpha	gnl\|CDD\|182146	PRK09920, PRK09920, acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Provisional.	1.28791e-150
NZ_CP027027.1\|WP_000332036.1\|4204709_4205840_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP027027.1\|WP_105242035.1\|4214001_4215192_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP027027.1\|WP_105242036.1\|4215384_4216335_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP027027.1\|WP_000580284.1\|4183297_4184620_+\|TIGR00366-family-protein	gnl\|CDD\|280776	pfam02667, SCFA_trans, Short chain fatty acid transporter. This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.	0
NZ_CP027027.1\|WP_000012339.1\|4193459_4195148_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0

>NZ_CP027027.1|WP_001075164.1|4202190_4204476_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP027027.1|WP_000990758.1|4198070_4198793_+|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG
MNAEKSPVIHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP027027.1|WP_001281263.1|4195296_4197924_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDGKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP027027.1|WP_000012339.1|4193459_4195148_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGLGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLSKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRWQASFGLEERTAEKTPVRLRIVASARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGVHESKAPEGVLPVSQTQQGEAQIWCREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGVAWQWLPITWQPL
>NZ_CP027027.1|WP_001104574.1|4186689_4188339_-|DUF2300-domain-containing-protein
MNWRRIVWLLVLVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKASTLPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDFIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP027027.1|WP_001225855.1|4185908_4186685_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP027027.1|WP_000786549.1|4184650_4185835_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP027027.1|WP_000580284.1|4183297_4184620_+|TIGR00366-family-protein
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVTLIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF
>NZ_CP027027.1|WP_000339065.1|4182650_4183301_+|acetate-CoA-transferase-subunit-beta
MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQSENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTAQHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL
>NZ_CP027027.1|WP_000850539.1|4181988_4182651_+|acetate-CoA-transferase-subunit-alpha
MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTLGAVIDHIIVSQESK
>NZ_CP027027.1|WP_000332036.1|4204709_4205840_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_CP027027.1|WP_000135037.1|4205839_4206094_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHHSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP027027.1|WP_000301055.1|4206147_4206798_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRNKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP027027.1|WP_001121440.1|4207004_4208036_+|IS630-like-element-IS630-family-transposase
MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEKMAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLKENPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV
>NZ_CP027027.1|WP_000772513.1|4208415_4209492_-|glycerophosphodiester-phosphodiesterase
MKLMLKNLSMAIMMSGMIMGSSAMATDSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDDIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP027027.1|WP_000948716.1|4209496_4210855_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMHDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHQELLQKRNGG
>NZ_CP027027.1|WP_000857259.1|4211127_4212756_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATNAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP027027.1|WP_001209884.1|4212745_4214005_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGNVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLREFGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDKTLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP027027.1|WP_105242035.1|4214001_4215192_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLTKVLNAMGTGVQLLSKEKCCGVPLLANGFTAKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTQELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP027027.1|WP_105242036.1|4215384_4216335_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLHAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKIEGWQEGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH

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Crispr_ID: NZ_CP027027_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_6

4913135-4913223

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027027_6

>merge|NZ_CP027027|6|4913135-4913223|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTATGACGCAATAAATGCAACTCCGACAACCGTGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_CP027027|6|6|4913135-4913223|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGTATGACGCAATAAATGCAACTCCGACAACC
GTGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_004967157.1\|4909092_4909767_+\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|366690
NZ_CP027027.1\|WP_105242078.1\|4918119_4918905_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP027027.1\|WP_004998488.1\|4913814_4914846_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP027027.1\|WP_001130266.1\|4923621_4924197_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP027027.1\|WP_000036723.1\|4906900_4908199_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP027027.1\|WP_001288227.1\|4911844_4911985_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027027.1\|WP_000631725.1\|4909763_4910111_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP027027.1\|WP_000109520.1\|4924213_4924474_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP027027.1\|WP_000039697.1\|4915018_4916497_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP027027.1\|WP_000254738.1\|4903750_4904086_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP027027.1\|WP_000210878.1\|4905175_4906813_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP027027.1\|WP_000147674.1\|4920450_4921860_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP027027.1\|WP_005010860.1\|4921837_4922617_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP027027.1\|WP_000226815.1\|4901190_4903425_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP027027.1\|WP_000059293.1\|4918974_4920429_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP027027.1\|WP_001071633.1\|4904156_4904948_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP027027.1\|WP_001164540.1\|4916523_4917801_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP027027.1\|WP_000581937.1\|4903502_4903751_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP027027.1\|WP_001199973.1\|4912123_4912795_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP027027.1\|WP_005000825.1\|4924464_4925736_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_004967157.1\|4909092_4909767_+\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	9.0752e-18
NZ_CP027027.1\|WP_105242078.1\|4918119_4918905_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.87397e-139
NZ_CP027027.1\|WP_004998488.1\|4913814_4914846_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.13929e-15
NZ_CP027027.1\|WP_001130266.1\|4923621_4924197_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP027027.1\|WP_000036723.1\|4906900_4908199_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP027027.1\|WP_000631725.1\|4909763_4910111_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.67353e-54
NZ_CP027027.1\|WP_000109520.1\|4924213_4924474_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.35112e-42
NZ_CP027027.1\|WP_000039697.1\|4915018_4916497_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.62177e-109
NZ_CP027027.1\|WP_000254738.1\|4903750_4904086_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP027027.1\|WP_000210878.1\|4905175_4906813_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP027027.1\|WP_000147674.1\|4920450_4921860_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.43219e-51
NZ_CP027027.1\|WP_005010860.1\|4921837_4922617_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.66917e-61
NZ_CP027027.1\|WP_000226815.1\|4901190_4903425_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP027027.1\|WP_000059293.1\|4918974_4920429_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	3.18569e-82
NZ_CP027027.1\|WP_001071633.1\|4904156_4904948_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.61702e-159
NZ_CP027027.1\|WP_001164540.1\|4916523_4917801_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	5.43011e-28
NZ_CP027027.1\|WP_000581937.1\|4903502_4903751_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP027027.1\|WP_001199973.1\|4912123_4912795_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP027027.1\|WP_005000825.1\|4924464_4925736_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	1.77313e-124

>NZ_CP027027.1|WP_001199973.1|4912123_4912795_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP027027.1|WP_001288227.1|4911844_4911985_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>NZ_CP027027.1|WP_000631725.1|4909763_4910111_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI
>NZ_CP027027.1|WP_004967157.1|4909092_4909767_+|IS66-family-insertion-sequence-hypothetical-protein
MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIREMKGGIR
>NZ_CP027027.1|WP_000036723.1|4906900_4908199_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP027027.1|WP_000210878.1|4905175_4906813_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP027027.1|WP_001071633.1|4904156_4904948_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHIFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP027027.1|WP_000254738.1|4903750_4904086_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP027027.1|WP_000581937.1|4903502_4903751_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP027027.1|WP_000226815.1|4901190_4903425_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP027027.1|WP_004998488.1|4913814_4914846_+|IS630-family-transposase
MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEKMAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLKENPKFRGIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV
>NZ_CP027027.1|WP_000039697.1|4915018_4916497_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHILFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP027027.1|WP_001164540.1|4916523_4917801_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLIMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDNSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSTNNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTLSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP027027.1|WP_105242078.1|4918119_4918905_+|SDR-family-oxidoreductase
MSIESLNAFSMGFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLEHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP027027.1|WP_000059293.1|4918974_4920429_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETRFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNAGTIYPIEK
>NZ_CP027027.1|WP_000147674.1|4920450_4921860_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASITGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMFNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAVGNVGGANEHSVSV
>NZ_CP027027.1|WP_005010860.1|4921837_4922617_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGMPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTEHGLRCCRIRLPAVIAVRQCGEVALPVPGMRQRMAAGIAAIIRKTVAVELPAMQCLQLARAEQRRGAMLIDGQTVAEKAQKLWQDYLRQRMQS
>NZ_CP027027.1|WP_001130266.1|4923621_4924197_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP027027.1|WP_000109520.1|4924213_4924474_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP027027.1|WP_005000825.1|4924464_4925736_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEDANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: NZ_CP027027_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027027_7

4940085-4940357

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder

4 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP027027_7

>merge|NZ_CP027027|7|4940085-4940357|PILER-CR,CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGCATCCGGCGTGAATCGAACGTTACGTGTCGTCGTGTTCCCCACGCCAGCGGGGATAAACCGTTATTAACGGAAAAATACTGGCTTGTCGTTATGTGTTCCCCGCGTCAGCGGGGATAAACCGGTCCAACGACATGAGGCGGTGGAACGATACGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCAACAATTATTTTCGTCGCATCGTCATAGTGTTCCCCGCATCAGCGGGGATAAACCG

>NZ_CP027027|7|1|4940085-4940296|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCCGGCGTGAATCGAACGTTACGTGTCGTC
GTGTTCCCCACGCCAGCGGGGATAAACCG	TTATTAACGGAAAAATACTGGCTTGTCGTTAT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTCCAACGACATGAGGCGGTGGAACGATACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP027027|7|7|4940085-4940357|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCCGGCGTGAATCGAACGTTACGTGTCGTC
GTGTTCCCCACGCCAGCGGGGATAAACCG	TTATTAACGGAAAAATACTGGCTTGTCGTTAT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTCCAACGACATGAGGCGGTGGAACGATACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCAACAATTATTTTCGTCGCATCGTCATA
GTGTTCCCCGCATCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027027.1\|WP_000281426.1\|4938127_4938778_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP027027.1\|WP_000029321.1\|4935782_4936322_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP027027.1\|WP_001090358.1\|4943556_4944984_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP027027.1\|WP_000142534.1\|4931468_4934126_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP027027.1\|WP_000490393.1\|4940439_4941477_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP027027.1\|WP_000956458.1\|4931078_4931231_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP027027.1\|WP_000517474.1\|4946155_4946467_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP027027.1\|WP_000063176.1\|4939694_4939988_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP027027.1\|WP_001246104.1\|4945638_4945962_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP027027.1\|WP_000568963.1\|4948894_4949944_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP027027.1\|WP_001173674.1\|4944983_4945589_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP027027.1\|WP_000206410.1\|4936333_4937389_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP027027.1\|WP_005000855.1\|4934223_4935786_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP027027.1\|WP_000085076.1\|4937399_4938146_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP027027.1\|WP_000144880.1\|4938774_4939695_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP027027.1\|WP_001254932.1\|4947730_4948882_+\|IS30-like-element-IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP027027.1\|WP_000246143.1\|4946485_4947196_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP027027.1\|WP_000039835.1\|4930079_4930814_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP027027.1\|WP_086021023.1\|4941612_4942457_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP027027.1\|WP_000372390.1\|4942646_4943555_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
NZ_CP027027.1\|WP_000281426.1\|4938127_4938778_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	9.67395e-91
NZ_CP027027.1\|WP_000029321.1\|4935782_4936322_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	6.79872e-28
NZ_CP027027.1\|WP_001090358.1\|4943556_4944984_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP027027.1\|WP_000142534.1\|4931468_4934126_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.99971e-178
NZ_CP027027.1\|WP_000490393.1\|4940439_4941477_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP027027.1\|WP_000956458.1\|4931078_4931231_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP027027.1\|WP_000517474.1\|4946155_4946467_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	9.09757e-63
NZ_CP027027.1\|WP_000063176.1\|4939694_4939988_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP027027.1\|WP_001246104.1\|4945638_4945962_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP027027.1\|WP_000568963.1\|4948894_4949944_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP027027.1\|WP_001173674.1\|4944983_4945589_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.31559e-147
NZ_CP027027.1\|WP_000206410.1\|4936333_4937389_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.49036e-154
NZ_CP027027.1\|WP_005000855.1\|4934223_4935786_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP027027.1\|WP_000085076.1\|4937399_4938146_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.3947e-46
NZ_CP027027.1\|WP_000144880.1\|4938774_4939695_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.2458e-155
NZ_CP027027.1\|WP_001254932.1\|4947730_4948882_+\|IS30-like-element-IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.10185e-137
NZ_CP027027.1\|WP_000246143.1\|4946485_4947196_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.03963e-120
NZ_CP027027.1\|WP_000039835.1\|4930079_4930814_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.7782e-137
NZ_CP027027.1\|WP_086021023.1\|4941612_4942457_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	9.89128e-33
NZ_CP027027.1\|WP_000372390.1\|4942646_4943555_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>NZ_CP027027.1|WP_000063176.1|4939694_4939988_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP027027.1|WP_000144880.1|4938774_4939695_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFRQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTSKLIPLIEQVLAAGEIEPPQPASDMLPPAIPEPETLGDSGHRGRG
>NZ_CP027027.1|WP_000281426.1|4938127_4938778_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLLPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFVPELRTRQQLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP027027.1|WP_000085076.1|4937399_4938146_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSNPELLSAIISRRDYYTDAWWMVAVATTADAPYILEQLQEGLRHPVFPFYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQNHFRKLKVSLPKLHDECWWEGVHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP027027.1|WP_000206410.1|4936333_4937389_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGAMRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRIAVDIAMFGHMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWAMAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTEYVSFDVMNKQGSMKDVLDFICA
>NZ_CP027027.1|WP_000029321.1|4935782_4936322_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKVIDERQPFAAQLAAVMSEGRFTRLSAVKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP027027.1|WP_005000855.1|4934223_4935786_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDYRRWDDIWEDGLESEKLREALRSLEHAFQFGPDSPSFMQDFEVLTGDKVPVASLLPEIPCAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLIFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTRNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPAMVVKLFNPSSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGTRGDFSFVDIDFWNKTQHRFLRLVRQIEDGQDADELLGKWQKEMWLFARQDFDERVFTSPYEPVDLKRVMTARKKYFTTSAEKQNAKAAREKKQEAVE
>NZ_CP027027.1|WP_000142534.1|4931468_4934126_+|CRISPR-associated-helicase/endonuclease-Cas3
MTFFDFWGKNRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLADYFRQLGFADTEQAAQFFAWLLCWHDTGKFARSFQQLYLHPQLKVPESSRKNYEKISHSTLGYWLWHHYLSECEELLPASSLSPRKLKRVIDMWMPITTGHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPLIEIPTFWDDDEGVELIKQLSWYISATVVLADWTGSSARFFPRVAQAMDIKGYWQKTLVQAQNALTVFPLKAKAAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLSFYSPESRPSLVLAHSARTLMDRFNESLWSGDLIGSEEPDEQAFNQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLFATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWLTHVTKTDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIQVYRQLLSRGVIPASSLSLFHSRFAFSDRQRIEMETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPVDLLIQRVGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGRAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRTMAKKFVLNFRPGYAASINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQDPEMANVILVTDDESCVYSAMEGLTGKVG
>NZ_CP027027.1|WP_000956458.1|4931078_4931231_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP027027.1|WP_000039835.1|4930079_4930814_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDLILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP027027.1|WP_000490393.1|4940439_4941477_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMAGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMTHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP027027.1|WP_086021023.1|4941612_4942457_-|IS5-family-transposase
MARYDLPDEAWTIIKPLLPPEPATPRAGRPWAEHRKIINGMFWVLCSGAPWRDLPERYGSWKTVYNRFNRWSKSGVINIIFNRLLSLLDANGFIDWSATALDGSNIRALKCAAGGSKKHPDIDGDNGPGRSRGGFGTKIHLATDGSGLPLNIVLSPGQAHESQFAQRLLDGIGVQRQNGSMKRRGHAVLADKAYSGRALRNELKNNGIKAVIPRKSNEKMASDGRAQLDRDAYCNRNVVERCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN
>NZ_CP027027.1|WP_000372390.1|4942646_4943555_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFIHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP027027.1|WP_001090358.1|4943556_4944984_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP027027.1|WP_001173674.1|4944983_4945589_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIISS
>NZ_CP027027.1|WP_001246104.1|4945638_4945962_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP027027.1|WP_000517474.1|4946155_4946467_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTKPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP027027.1|WP_000246143.1|4946485_4947196_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDVQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP027027.1|WP_001254932.1|4947730_4948882_+|IS30-like-element-IS30-family-transposase
MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD
>NZ_CP027027.1|WP_000568963.1|4948894_4949944_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREVLAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027027_2	2.1\|1660100\|54\|NZ_CP027027\|CRISPRCasFinder	1660100-1660153	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
NZ_CP027027_3	3.1\|3251616\|38\|NZ_CP027027\|CRISPRCasFinder	3251616-3251653	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP027027_4	4.1\|3884663\|58\|NZ_CP027027\|CRISPRCasFinder	3884663-3884720	58	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	104-161	5	0.914
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP027027_4	4.1\|3884663\|58\|NZ_CP027027\|CRISPRCasFinder	3884663-3884720	58	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7432-7489	11	0.81
NZ_CP027027_4	4.1\|3884663\|58\|NZ_CP027027\|CRISPRCasFinder	3884663-3884720	58	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84256-84313	11	0.81
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP027027_2	2.1\|1660100\|54\|NZ_CP027027\|CRISPRCasFinder	1660100-1660153	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP027027_5	5.1\|4204566\|49\|NZ_CP027027\|CRISPRCasFinder	4204566-4204614	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 2.1|1660100|54|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

gaatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	CRISPR spacer
caatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	Protospacer
 *****************************************************

2. spacer 3.1|3251616|38|NZ_CP027027|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 4.1|3884663|58|NZ_CP027027|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 5, identity: 0.914

agacccgagcacagaaccgtaggccggataaggcgttcacgccgcatccggcattcag	CRISPR spacer
agacccgagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgatcgt	Protospacer
*********************** ****************************. **.

4. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

5. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

6. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

7. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

8. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

9. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

10. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

11. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

12. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

13. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

14. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

15. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

16. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

17. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

18. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

19. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

20. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

21. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

22. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

23. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

24. spacer 4.1|3884663|58|NZ_CP027027|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 11, identity: 0.81

---agacccgagcacagaaccgtaggccggataaggcgttcacgccgcatccggcattca	CRISPR spacer
acaaaact---gcactcaaccgtaggccggataaggcgttcacgccgcatccggcaattg	Protospacer
   *.**.   ****  *************************************** *..

25. spacer 4.1|3884663|58|NZ_CP027027|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 11, identity: 0.81

---agacccgagcacagaaccgtaggccggataaggcgttcacgccgcatccggcattca	CRISPR spacer
acaaaact---gcactcaaccgtaggccggataaggcgttcacgccgcatccggcaattg	Protospacer
   *.**.   ****  *************************************** *..

26. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

27. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

28. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

29. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

30. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

31. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

32. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

33. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

34. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

35. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

36. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

37. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

38. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

39. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

40. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

41. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

42. spacer 2.1|1660100|54|NZ_CP027027|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

gaatgccggatgcgctttgcttatccggcctacaaaatcgc-----agcgtgtaggcca	CRISPR spacer
tactgccggatgcgctttgcttatccggcctacaataccgcgaattaatttgta-----	Protospacer
 * ******************************** *.***     *.. ****

43. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

44. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

45. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

46. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

47. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

48. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

49. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

50. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

51. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

52. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

53. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

54. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

55. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

56. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

57. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

58. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

59. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

60. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

61. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

62. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

63. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

64. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

65. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

66. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

67. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

68. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

69. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

70. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

71. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

72. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

73. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

74. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

75. spacer 5.1|4204566|49|NZ_CP027027|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4685 : 47785

Paenibacillus_phage(50.0%)

tRNA,protease,transposase,integrase

attL 9907:9923|attR 38459:38475

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171765174.1\|4685_6032_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001112301.1\|6456_7851_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|7927_8425_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|8519_9227_+	deoxyribonuclease I	NA	NA	NA	NA
WP_004972872.1\|9306_10038_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
9907:9923	attL	NA	NA	NA	NA
WP_000593273.1\|10050_11001_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|11109_11673_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017111.1\|11672_12089_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001055629.1\|12264_13245_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|13262_13967_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|13984_14551_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|14547_14838_+	YggU family protein	NA	NA	NA	NA
WP_001174743.1\|14845_15439_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239925.1\|15431_16568_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000577039.1\|17907_18411_+	TRAP transporter small permease	NA	NA	NA	NA
WP_105241767.1\|18410_19703_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_001121440.1\|19708_20740_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000745260.1\|20910_21918_-	DUF1202 family protein	NA	NA	NA	NA
WP_105241768.1\|22034_23081_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|23256_23976_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107564.1\|24159_24486_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|24485_25205_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_024258932.1\|25365_26418_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|26445_26721_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|26785_27865_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001360964.1\|28066_29323_+	nucleoside permease NupG	NA	NA	NA	NA
WP_005010928.1\|29370_31506_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234512.1\|31903_32611_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218864.1\|32989_34252_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	3.5e-77	38.1
WP_005001163.1\|35269_36769_-	amino acid permease	NA	NA	NA	NA
WP_000671171.1\|36843_39213_-	arginine decarboxylase	NA	NA	NA	NA
38459:38475	attR	NA	NA	NA	NA
WP_005010922.1\|39317_40787_-	amino acid permease	NA	NA	NA	NA
WP_094110432.1\|41791_42635_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1
WP_000477077.1\|43268_43616_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_000747051.1\|43685_44036_+\|transposase	transposase	Q716C1	Shigella_phage	1.8e-39	98.9
WP_005010759.1\|44076_45108_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_052991763.1\|45204_46161_-	hypothetical protein	NA	NA	NA	NA
WP_165850882.1\|46162_46534_-	molecular chaperone	NA	NA	NA	NA
WP_001344973.1\|46533_46911_-	molecular chaperone	NA	NA	NA	NA
WP_086021050.1\|46940_47785_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0

DBSCAN-SWA_2

108266 : 156629

Moraxella_phage(25.0%)

tRNA,transposase,head,integrase,capsid

attL 118188:118204|attR 168304:168320

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001121440.1\|108266_109298_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_001077147.1\|109381_110284_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_005001201.1\|112372_113515_+	hypothetical protein	NA	NA	NA	NA
WP_005036606.1\|113639_114419_-	transcriptional regulator GlcC	NA	NA	NA	NA
WP_000853256.1\|116695_117100_+	protein GlcG	NA	NA	NA	NA
118188:118204	attL	NA	NA	NA	NA
WP_005010759.1\|119526_120558_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000350095.1\|120735_120936_-	cell surface composition regulator GlgS	NA	NA	NA	NA
WP_001047862.1\|121204_121834_+	DUF1449 family protein	NA	NA	NA	NA
WP_000341055.1\|121860_123522_+	flotillin family protein	NA	NA	NA	NA
WP_001387081.1\|123760_123820_+	type I toxin-antitoxin system Ibs family toxin	NA	NA	NA	NA
WP_001387082.1\|124136_124196_+	type I toxin-antitoxin system Ibs family toxin	NA	NA	NA	NA
WP_000869197.1\|124315_125749_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A1B1IUK5	uncultured_Mediterranean_phage	1.4e-40	29.3
WP_005010914.1\|125796_128637_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_000046257.1\|128659_129961_-	inorganic triphosphatase	NA	NA	NA	NA
WP_001125337.1\|130202_130823_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_000708515.1\|130886_132125_+\|tRNA	fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca	A0A0F6YPT7	Sinorhizobium_phage	5.0e-92	51.3
WP_001305111.1\|132287_133109_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_001295541.1\|133199_133568_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_001272796.1\|133672_134290_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_000935226.1\|134302_135235_-	DNA-binding transcriptional activator TtdR	NA	NA	NA	NA
WP_000986806.1\|135441_136353_+	L(+)-tartrate dehydratase subunit alpha	NA	NA	NA	NA
WP_000722957.1\|136349_136955_+	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA
WP_039071980.1\|137003_138467_+	L-tartrate/succinate antiporter	NA	NA	NA	NA
WP_001264365.1\|138509_139523_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.8e-109	59.2
WP_001144069.1\|139760_139976_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_000918808.1\|140086_141832_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.4e-77	38.4
WP_000437371.1\|142026_143868_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
WP_171765175.1\|144005_145352_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000228937.1\|145385_145892_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_089636741.1\|146413_146698_-	hypothetical protein	NA	NA	NA	NA
WP_089565840.1\|146980_147421_-	hypothetical protein	NA	NA	NA	NA
WP_097727718.1\|147631_148057_-	hypothetical protein	NA	NA	NA	NA
WP_105241774.1\|148071_148401_-\|head	head decoration protein	NA	NA	NA	NA
WP_105241775.1\|148411_149467_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.6e-73	45.4
WP_089565838.1\|149466_149673_-	hypothetical protein	NA	NA	NA	NA
WP_105241776.1\|149930_150353_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_105241777.1\|150349_150601_-	hypothetical protein	NA	NA	NA	NA
WP_105241779.1\|150802_152218_-	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.5e-113	57.9
WP_105241780.1\|152214_152514_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_165487781.1\|152519_152729_-	hypothetical protein	NA	NA	NA	NA
WP_077630326.1\|154241_154415_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_105241781.1\|154587_155208_-	hypothetical protein	NA	NA	NA	NA
WP_105241782.1\|155204_156629_-\|integrase	integrase family protein	A0A0R6PGY7	Moraxella_phage	6.4e-43	30.5
168304:168320	attR	NA	NA	NA	NA

DBSCAN-SWA_3

187728 : 232790

Paenibacillus_phage(60.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171765176.1\|187728_188957_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.2e-176	98.7
WP_105241784.1\|189032_190127_-	pilus assembly protein CblD	NA	NA	NA	NA
WP_094110432.1\|192015_192860_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1
WP_000755097.1\|193817_194318_-	fimbrial protein	NA	NA	NA	NA
WP_000225868.1\|194347_195064_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000406488.1\|195359_196136_+	transcriptional regulator ExuR	NA	NA	NA	NA
WP_000422149.1\|196480_197143_+	DedA family protein	NA	NA	NA	NA
WP_001297156.1\|197675_198044_+	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_000031415.1\|198081_198387_+	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000785722.1\|198389_198794_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_000096086.1\|198783_199083_+	YqjK-like family protein	NA	NA	NA	NA
WP_000603618.1\|199178_199661_+	DoxX family protein	NA	NA	NA	NA
WP_000531219.1\|199730_200717_+	glutathionyl-hydroquinone reductase YqjG	NA	NA	NA	NA
WP_001314179.1\|201009_201378_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000633568.1\|202585_203287_+	pirin family protein	NA	NA	NA	NA
WP_001345966.1\|203309_203474_+	hypothetical protein	NA	NA	NA	NA
WP_000460502.1\|203607_204918_-	serine dehydratase subunit alpha family protein	NA	NA	NA	NA
WP_094110432.1\|204982_205826_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1
WP_000107723.1\|206673_208005_-	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_000548347.1\|208026_209016_-	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_000104191.1\|209114_210053_-	transcriptional regulator TdcA	NA	NA	NA	NA
WP_000145832.1\|210241_210586_+	DNA-binding transcriptional activator TdcR	NA	NA	NA	NA
WP_000675746.1\|210841_211381_+	hypothetical protein	NA	NA	NA	NA
WP_005012792.1\|211527_212559_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_004971349.1\|213739_214885_-	glycerate 2-kinase	W6LM47	Streptococcus_phage	3.7e-49	41.3
WP_005089576.1\|214981_215872_-	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA
WP_105241785.1\|215901_216672_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_000599636.1\|216687_218022_-	galactarate/glucarate/glycerate transporter GarP	NA	NA	NA	NA
WP_105241786.1\|218396_219968_+	galactarate dehydratase	NA	NA	NA	NA
WP_001307405.1\|220116_220452_+	type II toxin-antitoxin system antitoxin PrlF	NA	NA	NA	NA
WP_000347255.1\|220451_220916_+	type II toxin-antitoxin system ribonuclease toxin YhaV	NA	NA	NA	NA
WP_000072187.1\|220970_221780_-	aga operon transcriptional regulator AgaR	NA	NA	NA	NA
WP_000681932.1\|222028_223309_+	tagatose-bisphosphate aldolase subunit KbaZ	NA	NA	NA	NA
WP_001295547.1\|223331_223805_+	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA
WP_000406227.1\|223815_224595_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_001295548.1\|224584_225463_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_000948814.1\|225480_225915_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_001114849.1\|227395_228550_+	AgaS family sugar isomerase	NA	NA	NA	NA
WP_000022766.1\|228562_229423_+	tagatose-bisphosphate aldolase subunit KbaY	NA	NA	NA	NA
WP_000098008.1\|229588_230065_+	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA
WP_000544484.1\|230103_230907_+	PTS N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_000534351.1\|230896_231688_+	PTS N-acetylgalactosamine transporter subunit IID	NA	NA	NA	NA
WP_000439448.1\|231688_231901_+	hypothetical protein	NA	NA	NA	NA
WP_094110432.1\|231946_232790_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1

DBSCAN-SWA_4

565465 : 621898

uncultured_Caudovirales_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004998488.1\|565465_566497_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000384048.1\|566477_566774_+	membrane protein	NA	NA	NA	NA
WP_001168544.1\|566868_567780_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_001291766.1\|567789_569859_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_094192380.1\|570158_571527_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5
WP_001135738.1\|571629_571782_+	type I toxin-antitoxin system toxin HokA	NA	NA	NA	NA
WP_000014594.1\|571969_572182_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	2.7e-22	72.9
WP_000455798.1\|572462_572753_-	HTH-type transcriptional regulator	NA	NA	NA	NA
WP_000190518.1\|573186_573897_+	DUF3053 domain-containing protein	NA	NA	NA	NA
WP_000805019.1\|573946_574921_-	glyoxylate/hydroxypyruvate reductase GhrB	NA	NA	NA	NA
WP_000747641.1\|575024_575684_-	OmpA family lipoprotein	NA	NA	NA	NA
WP_000959820.1\|577199_579479_+	biotin sulfoxide reductase	A0A077SK27	Escherichia_phage	3.6e-72	29.6
WP_000617472.1\|579447_579888_-	N-acetyltransferase	NA	NA	NA	NA
WP_000438967.1\|579884_580448_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_000584472.1\|580605_581304_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_000189037.1\|581532_582741_+	MFS transporter	NA	NA	NA	NA
WP_001269234.1\|583064_584756_+	kdo(2)-lipid A phosphoethanolamine 7''-transferase	NA	NA	NA	NA
WP_000938855.1\|587615_588635_+	dipeptide ABC transporter permease DppB	NA	NA	NA	NA
WP_000084677.1\|588644_589547_+	dipeptide ABC transporter permease DppC	NA	NA	NA	NA
WP_001196482.1\|589557_590541_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-14	28.4
WP_000107031.1\|590537_591542_+	dipeptide ABC transporter ATP binding subunit DppF	G9BWD6	Planktothrix_phage	1.1e-20	33.7
WP_001295225.1\|591571_592843_-	transporter	NA	NA	NA	NA
WP_001295224.1\|593318_593426_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001295224.1\|593801_593909_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001295224.1\|594284_594392_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001295224.1\|594767_594875_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_005010277.1\|596306_597653_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_005010191.1\|597851_598883_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_086021050.1\|599006_599850_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000439190.1\|600653_601856_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000902786.1\|602087_603587_+	inorganic phosphate transporter PitA	NA	NA	NA	NA
WP_000626187.1\|603657_603993_-	universal stress protein UspB	NA	NA	NA	NA
WP_000323571.1\|604383_604818_+	universal stress protein UspA	NA	NA	NA	NA
WP_001098647.1\|605134_606604_+	dipeptide/tripeptide permease DtpB	NA	NA	NA	NA
WP_000686620.1\|606652_607405_-	16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ	NA	NA	NA	NA
WP_024261626.1\|607412_609455_-	oligopeptidase A	A0A1V0SD92	Indivirus	1.7e-44	22.9
WP_000954225.1\|609657_610500_+	23S rRNA (adenine(2030)-N(6))-methyltransferase	NA	NA	NA	NA
WP_000160824.1\|610574_611927_+	glutathione-disulfide reductase	NA	NA	NA	NA
WP_001295215.1\|611980_612064_-	hypothetical protein	NA	NA	NA	NA
WP_000008955.1\|612806_613160_+	arsenical resistance operon transcriptional regulator ArsR	A0A2H4J145	uncultured_Caudovirales_phage	5.7e-25	50.9
WP_005010403.1\|613214_614504_+	arsenite/antimonite:H(+) antiporter ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.0e-172	73.3
WP_000065764.1\|614516_614942_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.0
WP_001057453.1\|617039_617606_+	outer membrane lipoprotein Slp	NA	NA	NA	NA
WP_000478623.1\|617761_618292_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001296814.1\|618333_618981_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	6.1e-17	38.5
WP_001298717.1\|619044_619371_-	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_000756550.1\|619486_619819_-	acid-activated periplasmic chaperone HdeA	NA	NA	NA	NA
WP_000965672.1\|620073_620646_+	acid-resistance protein HdeD	NA	NA	NA	NA
WP_004998488.1\|620866_621898_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

635549 : 724135

Stx2-converting_phage(27.78%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005010290.1\|635549_636896_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001167676.1\|636964_637567_-	response regulator transcription factor	NA	NA	NA	NA
WP_171765177.1\|638014_638986_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000191266.1\|639034_640048_+	inner membrane protein YhjD	NA	NA	NA	NA
WP_001149009.1\|640458_641781_+	MHS family MFS transporter	NA	NA	NA	NA
WP_024258924.1\|644143_644911_-	cyclic-guanylate-specific phosphodiesterase	NA	NA	NA	NA
WP_000476973.1\|644923_646072_+	2-dehydro-3-deoxygluconokinase	NA	NA	NA	NA
WP_001163137.1\|646167_647664_-	insulinase family protein	NA	NA	NA	NA
WP_000858214.1\|647884_649171_-	C4-dicarboxylate transporter DctC	NA	NA	NA	NA
WP_001266306.1\|649353_651342_-	biofilm formation regulator HmsP	NA	NA	NA	NA
WP_004967149.1\|653524_655126_-\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-148	61.5
WP_000631725.1\|655145_655493_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_004998909.1\|655489_656164_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.5e-10	30.8
WP_000923158.1\|659251_659590_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.1e-29	56.1
WP_000187617.1\|659656_660025_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	4.2e-63	98.4
WP_000612593.1\|660021_660369_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	8.2e-61	99.1
WP_001254932.1\|661049_662201_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001254932.1\|666622_667774_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_088895429.1\|669474_670257_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.7e-138	99.2
WP_001254932.1\|674450_675602_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_088895413.1\|677567_678795_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	8.5e-177	99.0
WP_072038484.1\|679033_679243_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_086021050.1\|679587_680431_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_004971737.1\|682142_682262_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000555342.1\|682788_683046_-	hypothetical protein	NA	NA	NA	NA
WP_000991372.1\|684877_685492_+	acid-sensing system DNA-binding response regulator EvgA	NA	NA	NA	NA
WP_001254932.1\|688411_689563_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001034079.1\|690561_694449_-\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	2.2e-226	38.9
WP_005038950.1\|694699_694843_+	hypothetical protein	NA	NA	NA	NA
WP_105241806.1\|696072_697300_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001254932.1\|698386_699538_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001387241.1\|700156_702352_-	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_000750132.1\|702357_703695_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001015713.1\|703691_705434_-	aerobactin synthase IucC	NA	NA	NA	NA
WP_001287501.1\|705433_706381_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_005011344.1\|706381_708106_-	aerobactin synthase IucA	NA	NA	NA	NA
WP_000074473.1\|708241_709435_+	MFS transporter	NA	NA	NA	NA
WP_158250164.1\|710514_711033_-	hypothetical protein	NA	NA	NA	NA
WP_088895413.1\|711822_713051_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	8.5e-177	99.0
WP_001173343.1\|713902_714076_-	type V toxin-antitoxin system toxin GhoT	NA	NA	NA	NA
WP_000398619.1\|714102_714399_-	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_000371704.1\|714909_715140_-	(4Fe-4S)-binding protein	NA	NA	NA	NA
WP_001216476.1\|715320_716952_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_000611297.1\|716948_717668_+	two-component system response regulator DcuR	NA	NA	NA	NA
WP_000899522.1\|718238_719579_+	anaerobic C4-dicarboxylate transporter DcuB	NA	NA	NA	NA
WP_000066686.1\|719656_721303_+	class I fumarate hydratase	NA	NA	NA	NA
WP_000198748.1\|721425_722055_+	DUF2238 domain-containing protein	NA	NA	NA	NA
WP_105242100.1\|722906_724135_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3

DBSCAN-SWA_6

952828 : 1019368

Paenibacillus_phage(20.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000420783.1\|952828_953965_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_000644419.1\|954688_954925_-	hypothetical protein	NA	NA	NA	NA
WP_001143967.1\|955558_956752_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	5.8e-138	62.0
WP_105241820.1\|956773_960421_-	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.8e-12	28.6
WP_000710769.1\|960580_960793_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_005002270.1\|960995_963194_+	primosomal protein N'	NA	NA	NA	NA
WP_000644892.1\|963349_964375_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_000068834.1\|964466_965426_+	cell division protein FtsN	NA	NA	NA	NA
WP_000208242.1\|965518_966049_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001293341.1\|966058_967390_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
WP_000139496.1\|967456_968383_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000872908.1\|968475_968961_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_001296623.1\|969045_969291_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000084278.1\|969716_970562_+	glycerol uptake facilitator protein GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	3.4e-15	28.0
WP_105241821.1\|970584_972093_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_001250613.1\|972227_973238_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000796337.1\|973334_974081_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_000323555.1\|974085_974514_-	universal stress protein UspD	NA	NA	NA	NA
WP_000655986.1\|974540_974840_-	DUF406 domain-containing protein	NA	NA	NA	NA
WP_000155257.1\|975050_975491_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000802226.1\|975591_976191_+	YiiQ family protein	NA	NA	NA	NA
WP_001216325.1\|976298_977066_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_000708998.1\|977120_977876_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_001045689.1\|977982_978972_-	sulfate/thiosulfate ABC transporter substrate-binding protein Sbp	NA	NA	NA	NA
WP_000591795.1\|979290_980253_-	6-phosphofructokinase	NA	NA	NA	NA
WP_001076737.1\|980433_981336_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
WP_005002255.1\|981483_981984_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
WP_001033722.1\|982133_982832_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580413.1\|982828_984202_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.8e-16	25.9
WP_001270260.1\|984307_984982_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_001297064.1\|986372_986993_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	4.9e-64	59.8
WP_000063486.1\|987277_988312_+	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA
WP_001297062.1\|988308_989247_-	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
WP_000217155.1\|989230_990067_-	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
WP_000144083.1\|990354_991824_+	rhamnulokinase	NA	NA	NA	NA
WP_000211492.1\|991820_993080_+	L-rhamnose isomerase	NA	NA	NA	NA
WP_001179780.1\|993321_994146_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
WP_000619515.1\|994155_994470_+	L-rhamnose mutarotase	NA	NA	NA	NA
WP_000729598.1\|994770_995217_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA
WP_000446001.1\|995227_996679_+	PTS fructose-like transporter subunit IIBC	NA	NA	NA	NA
WP_001019509.1\|996668_997577_+	peptidase	NA	NA	NA	NA
WP_000931321.1\|997576_999319_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_001121440.1\|999613_1000645_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_005002230.1\|1000728_1001637_-	DUF3829 domain-containing protein	NA	NA	NA	NA
WP_000753580.1\|1001789_1002623_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_094192385.1\|1002816_1005867_+	formate dehydrogenase-N subunit alpha	A0A077SK27	Escherichia_phage	7.2e-07	23.6
WP_000331371.1\|1005879_1006782_+	formate dehydrogenase O subunit beta	NA	NA	NA	NA
WP_000829013.1\|1006778_1007414_+	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_000027708.1\|1007410_1008340_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_001086388.1\|1008669_1008912_-	hypothetical protein	NA	NA	NA	NA
WP_001295676.1\|1009130_1009349_-	CopG family transcriptional regulator	NA	NA	NA	NA
WP_000226342.1\|1010024_1011839_-	hypothetical protein	NA	NA	NA	NA
WP_086021050.1\|1012213_1013058_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005012255.1\|1013167_1014106_-	fatty acid biosynthesis protein FabY	NA	NA	NA	NA
WP_000560983.1\|1014150_1014588_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_000920762.1\|1014584_1015457_-	virulence factor BrkB family protein	NA	NA	NA	NA
WP_004968947.1\|1015450_1016050_-	glucose-1-phosphatase	NA	NA	NA	NA
WP_001127584.1\|1016190_1016694_-	aldose 1-epimerase	NA	NA	NA	NA
WP_105241823.1\|1016733_1018416_-	MFS transporter	NA	NA	NA	NA
WP_094110432.1\|1018523_1019368_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1

DBSCAN-SWA_7

1040765 : 1046979

Shigella_phage(42.86%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000514034.1\|1040765_1041461_-	hypothetical protein	A0A0C4UQZ7	Shigella_phage	2.4e-128	95.2
WP_032157564.1\|1041411_1041597_-	Com family DNA-binding transcriptional regulator	A0A0C4UQS3	Shigella_phage	1.1e-19	71.0
WP_024259023.1\|1041721_1042348_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.2e-72	72.3
WP_077901256.1\|1043687_1044218_-\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	6.9e-67	67.6
WP_000500228.1\|1044232_1045330_-	hypothetical protein	A0A0C4UQS2	Shigella_phage	2.1e-62	42.7
WP_000951401.1\|1045333_1045918_-	DUF2313 domain-containing protein	M4M9M8	Vibrio_phage	2.8e-45	45.1
WP_001146187.1\|1045902_1046979_-\|plate	baseplate J/gp47 family protein	A0A2I7S9E5	Vibrio_phage	6.9e-90	49.9

DBSCAN-SWA_8

1152379 : 1196269

Paramecium_bursaria_Chlorella_virus(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000140459.1\|1152379_1153576_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001131164.1\|1153708_1154401_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_001280869.1\|1154423_1155689_+	MFS transporter	NA	NA	NA	NA
WP_000224470.1\|1155654_1156647_-	ribose operon transcriptional repressor RbsR	NA	NA	NA	NA
WP_005010171.1\|1156650_1157580_-	ribokinase	NA	NA	NA	NA
WP_000957853.1\|1159409_1159598_+	hypothetical protein	NA	NA	NA	NA
WP_000947186.1\|1159607_1160807_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_005010277.1\|1161354_1162701_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_105241826.1\|1162803_1164633_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	4.3e-132	43.2
WP_000933736.1\|1164794_1166165_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	3.1e-34	36.7
WP_000957853.1\|1166555_1166744_+	hypothetical protein	NA	NA	NA	NA
WP_000947186.1\|1166753_1167953_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001251965.1\|1168204_1168624_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_000190506.1\|1168644_1170027_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_000896498.1\|1170053_1170917_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_001176745.1\|1170967_1172509_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_001288587.1\|1172521_1173055_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_001052219.1\|1173069_1173540_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_000429386.1\|1173601_1173841_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_000135625.1\|1173887_1174703_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_000116695.1\|1174711_1175092_-	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_000932844.1\|1175708_1176332_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_000499759.1\|1176395_1178285_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000763742.1\|1178663_1179107_-	FMN-binding protein MioC	NA	NA	NA	NA
WP_000432970.1\|1179196_1179655_-	transcriptional regulator AsnC	NA	NA	NA	NA
WP_105241827.1\|1179806_1180799_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	2.9e-50	37.7
WP_000947186.1\|1181289_1182489_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957853.1\|1182498_1182687_-	hypothetical protein	NA	NA	NA	NA
WP_001225165.1\|1183138_1183285_-	hypothetical protein	NA	NA	NA	NA
WP_001295222.1\|1183266_1184373_-	cellulase	NA	NA	NA	NA
WP_024259202.1\|1184379_1186719_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_000025902.1\|1186729_1189348_-	UDP-forming cellulose synthase catalytic subunit	NA	NA	NA	NA
WP_024258914.1\|1189344_1190094_-	cellulose biosynthesis protein BcsQ	NA	NA	NA	NA
WP_001149588.1\|1192287_1193610_-	xylose isomerase	NA	NA	NA	NA
WP_001300957.1\|1193975_1194968_+	D-xylose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001143981.1\|1195075_1196269_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	9.9e-138	62.2

DBSCAN-SWA_9

1408159 : 1468810

Vibrio_phage(12.5%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001294218.1\|1408159_1409299_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_005002499.1\|1409297_1410845_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_000981977.1\|1410816_1411278_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
WP_000990264.1\|1411296_1412631_+	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	6.7e-18	31.9
WP_001122456.1\|1412640_1414488_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.8e-60	41.3
WP_001280345.1\|1414480_1415431_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001051883.1\|1415516_1415825_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_044067435.1\|1415901_1417182_+	GTPase HflX	NA	NA	NA	NA
WP_000312488.1\|1417267_1418527_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5
WP_001232412.1\|1418529_1419534_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_001089295.1\|1419615_1419813_+	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_000527955.1\|1419916_1421215_+	adenylosuccinate synthase	W5S5V7	Pithovirus	2.2e-66	35.9
WP_001177639.1\|1421419_1421845_+	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA
WP_000076316.1\|1421883_1424325_+	ribonuclease R	Q0GXV6	Lactococcus_phage	6.4e-67	33.1
WP_001293282.1\|1424504_1425236_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000220139.1\|1425362_1425764_+	DUF2170 family protein	NA	NA	NA	NA
WP_000511952.1\|1425782_1426442_+	PspA/IM30 family protein	NA	NA	NA	NA
WP_001254932.1\|1427254_1428406_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000547748.1\|1429684_1430083_+	DUF350 domain-containing protein	NA	NA	NA	NA
WP_000101686.1\|1430092_1430731_+	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_000943983.1\|1430733_1431897_+	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	8.3e-81	43.5
WP_005002546.1\|1431980_1433606_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_000811566.1\|1433722_1433998_-\|protease	protease activator YjfN	NA	NA	NA	NA
WP_000254636.1\|1434146_1434476_-	biofilm peroxide resistance protein BsmA	NA	NA	NA	NA
WP_000569701.1\|1434657_1435407_+	esterase	NA	NA	NA	NA
WP_000133631.1\|1435403_1436159_-	HTH-type transcriptional regulator UlaR	NA	NA	NA	NA
WP_001295191.1\|1436266_1437331_-	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
WP_005013554.1\|1437685_1439083_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000218362.1\|1439098_1439404_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA
WP_000776523.1\|1439413_1439878_+	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
WP_000056760.1\|1439891_1440542_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_000949539.1\|1440551_1441406_+	L-ribulose-5-phosphate 3-epimerase UlaE	NA	NA	NA	NA
WP_001170803.1\|1441405_1442092_+	L-ribulose-5-phosphate 4-epimerase UlaF	NA	NA	NA	NA
WP_000492921.1\|1442812_1443088_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001216676.1\|1443414_1443810_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_024258241.1\|1443816_1444131_+	primosomal replication protein N	NA	NA	NA	NA
WP_000135199.1\|1444135_1444363_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_001196062.1\|1444404_1444854_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_005002567.1\|1444924_1445719_-	DUF2686 family protein	NA	NA	NA	NA
WP_005002568.1\|1446376_1447015_-	cell division protein YtfB	NA	NA	NA	NA
WP_000211237.1\|1447233_1447854_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_000228346.1\|1448161_1449574_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
WP_000331445.1\|1449618_1450281_-	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA
WP_105241839.1\|1450388_1451354_-	DMT family transporter	NA	NA	NA	NA
WP_000560550.1\|1451462_1452323_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_005002580.1\|1452411_1452792_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000589464.1\|1452909_1454853_-	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	NA	NA	NA
WP_000886892.1\|1455042_1455783_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_086021050.1\|1455842_1456686_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000937640.1\|1456912_1457824_+	hypothetical protein	NA	NA	NA	NA
WP_000175287.1\|1457913_1458468_-	YtfJ family protein	NA	NA	NA	NA
WP_005002644.1\|1458792_1458999_+	DUF1107 domain-containing protein	NA	NA	NA	NA
WP_000935042.1\|1459060_1460404_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001295196.1\|1460726_1461365_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_001269339.1\|1461570_1463304_+	autotransporter assembly complex protein TamA	NA	NA	NA	NA
WP_000060954.1\|1463300_1467080_+	autotransporter assembly complex protein TamB	NA	NA	NA	NA
WP_001219160.1\|1467082_1467424_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004994989.1\|1467463_1468810_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1677794 : 1754385

Paenibacillus_phage(36.36%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001121440.1\|1677794_1678826_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000425668.1\|1679892_1681617_+	acetolactate synthase 3 large subunit	E5ERI2	Ostreococcus_lucimarinus_virus	1.9e-36	26.9
WP_001252744.1\|1681619_1682111_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_032333899.1\|1682122_1682209_+	hypothetical protein	NA	NA	NA	NA
WP_000762401.1\|1682290_1683295_+	catabolite repressor/activator	NA	NA	NA	NA
WP_001295770.1\|1683896_1684355_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_000970485.1\|1684356_1685298_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_000625658.1\|1685294_1685660_+	cell division protein FtsL	NA	NA	NA	NA
WP_000642196.1\|1685675_1687442_+	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
WP_000775106.1\|1687428_1688916_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
WP_000626687.1\|1688912_1690271_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_000964124.1\|1690264_1691347_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_000796466.1\|1691349_1692666_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_005013454.1\|1692665_1693910_+	cell division protein FtsW	NA	NA	NA	NA
WP_000016548.1\|1693906_1694974_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_001096048.1\|1695027_1696503_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_000130073.1\|1696495_1697416_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_000075744.1\|1697417_1698248_+	cell division protein FtsQ	NA	NA	NA	NA
WP_000588471.1\|1698244_1699507_+	cell division protein FtsA	NA	NA	NA	NA
WP_000462776.1\|1699567_1700719_+	cell division protein FtsZ	NA	NA	NA	NA
WP_000595482.1\|1700819_1701737_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_000014320.1\|1701966_1702479_+	secA regulator SecM	NA	NA	NA	NA
WP_000905809.1\|1702540_1705246_+	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_000736004.1\|1705305_1705695_+	8-oxo-dGTP diphosphatase MutT	NA	NA	NA	NA
WP_000005036.1\|1705793_1705991_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_001194721.1\|1706000_1706744_-	cell division protein ZapD	NA	NA	NA	NA
WP_001269528.1\|1706743_1707364_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_001217337.1\|1707588_1708632_+	GMP reductase	A0A0N9Q9A5	Chrysochromulina_ericina_virus	6.3e-104	56.3
WP_086021050.1\|1708892_1709737_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_105241849.1\|1710776_1712162_-	type II secretion system protein GspE	NA	NA	NA	NA
WP_000360900.1\|1712171_1712612_-	prepilin peptidase-dependent pilin	NA	NA	NA	NA
WP_001135185.1\|1712814_1713708_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_000923721.1\|1713795_1714347_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	A0A1W6DX33	Sphingobium_phage	3.0e-12	32.3
WP_000172022.1\|1714343_1715213_+	beta-lactamase regulator AmpE	NA	NA	NA	NA
WP_000969916.1\|1715255_1716629_-	aromatic amino acid transporter AroP	NA	NA	NA	NA
WP_000331776.1\|1717169_1717934_+	pyruvate dehydrogenase complex transcriptional repressor PdhR	NA	NA	NA	NA
WP_000003820.1\|1718094_1720758_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_000963529.1\|1720772_1722665_+	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
WP_000102485.1\|1722989_1724414_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	4.2e-42	27.8
WP_086021050.1\|1724849_1725693_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_032335988.1\|1727607_1730205_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_000384306.1\|1730379_1730742_+	YacL family protein	NA	NA	NA	NA
WP_000734287.1\|1730779_1731574_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_000818429.1\|1731589_1732456_-	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_001295568.1\|1732561_1732909_-	YacC family pilotin-like protein	NA	NA	NA	NA
WP_001189617.1\|1733074_1734625_+	multicopper oxidase CueO	A0A0C6DWA2	Mamastrovirus	2.7e-18	55.4
WP_004989580.1\|1734826_1737217_-	quinoprotein glucose dehydrogenase	NA	NA	NA	NA
WP_000683335.1\|1737422_1737959_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	5.1e-17	33.1
WP_000651593.1\|1737999_1738662_-	carbonate dehydratase	NA	NA	NA	NA
WP_000150637.1\|1738770_1739697_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-21	34.0
WP_000972197.1\|1739693_1740464_+	ABC transporter permease	NA	NA	NA	NA
WP_000901989.1\|1740568_1741009_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000277902.1\|1741072_1742302_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_000621515.1\|1742305_1742686_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_000905383.1\|1745372_1746224_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_000805451.1\|1746235_1747030_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
WP_000713138.1\|1747142_1748417_-	fimbrial-like adhesin	NA	NA	NA	NA
WP_105241851.1\|1749611_1750455_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.8e-22	49.1
WP_004996846.1\|1750970_1752002_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_086021050.1\|1753540_1754385_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0

DBSCAN-SWA_11

1759654 : 1900016

115

Stx2-converting_phage(20.69%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000937420.1\|1759654_1760581_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_001155227.1\|1760617_1761073_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_000396056.1\|1761250_1761955_-	DNA/RNA nuclease SfsA	NA	NA	NA	NA
WP_001294700.1\|1761969_1762500_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_024259111.1\|1762573_1765003_+	ATP-dependent helicase HrpB	A0A0G2Y9F4	Acanthamoeba_polyphaga_mimivirus	2.7e-41	29.3
WP_000918137.1\|1765135_1767670_+	bifunctional glycosyl transferase/transpeptidase	NA	NA	NA	NA
WP_005033089.1\|1770128_1770926_+	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	G9BWD6	Planktothrix_phage	6.0e-14	27.4
WP_004975547.1\|1770925_1771816_+	Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA	NA	NA	NA
WP_000044045.1\|1771812_1773795_+	Fe(3+)-hydroxamate ABC transporter permease FhuB	NA	NA	NA	NA
WP_000045299.1\|1773829_1775110_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_000845403.1\|1775334_1776756_+	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA
WP_120795373.1\|1776779_1776845_+	protein YadW	NA	NA	NA	NA
WP_001295564.1\|1776837_1777182_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	4.5e-27	51.4
WP_000964221.1\|1777228_1777852_-	TRIC cation channel family protein	NA	NA	NA	NA
WP_005012419.1\|1777889_1778690_-	vitamin B12 ABC transporter substrate-binding protein BtuF	NA	NA	NA	NA
WP_000689844.1\|1778682_1779381_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_000057094.1\|1779464_1780982_+	dGTPase	NA	NA	NA	NA
WP_000753946.1\|1781111_1782536_+\|protease	serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-26	28.8
WP_001254932.1\|1783623_1784775_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000046052.1\|1785203_1786334_+	DNA-binding transcriptional regulator CdaR	NA	NA	NA	NA
WP_000272188.1\|1786422_1786809_-	DUF3461 family protein	NA	NA	NA	NA
WP_105241854.1\|1786970_1787783_-	phosphodiesterase YaeI	NA	NA	NA	NA
WP_001186650.1\|1787837_1788662_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_001094579.1\|1788692_1791365_-	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
WP_001018194.1\|1791426_1792221_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_000246882.1\|1792588_1793314_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_000818114.1\|1793571_1794423_+	elongation factor Ts	NA	NA	NA	NA
WP_000224573.1\|1794569_1795295_+	UMP kinase	NA	NA	NA	NA
WP_000622418.1\|1795586_1796144_+	ribosome recycling factor	NA	NA	NA	NA
WP_000811936.1\|1796235_1797432_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_001088287.1\|1799019_1799694_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_000631709.1\|1799690_1800038_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
WP_105241855.1\|1801657_1801858_+\|transposase	transposase	NA	NA	NA	NA
WP_105241856.1\|1801861_1803394_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.7e-44	35.7
WP_000775238.1\|1803846_1804008_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_000622995.1\|1805488_1805836_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-46	75.7
WP_171765179.1\|1806279_1807290_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_004996908.1\|1807480_1808239_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	7.7e-27	44.4
WP_000922455.1\|1808251_1809109_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_004973152.1\|1809120_1810473_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240881.1\|1810502_1812935_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|1813056_1813542_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139296.1\|1813545_1814571_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|1814675_1815131_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565968.1\|1815134_1815923_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000139679.1\|1815922_1817071_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569419.1\|1817067_1817664_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.9e-26	40.0
WP_001294806.1\|1817700_1821183_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.1e-208	36.8
WP_000055741.1\|1821195_1822155_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_001020968.1\|1822253_1824395_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|1824451_1824841_+	VOC family protein	NA	NA	NA	NA
WP_000176558.1\|1824905_1826204_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062307.1\|1826252_1826513_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|1826499_1826700_-	YaeP family protein	NA	NA	NA	NA
WP_000635545.1\|1827406_1827829_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239197.1\|1827842_1828553_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_105241859.1\|1828707_1829532_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260708.1\|1829585_1831304_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094011.1\|1831414_1832122_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202329.1\|1832118_1832523_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874226.1\|1832640_1833456_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294597.1\|1833495_1834149_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593994.1\|1834141_1835173_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140181.1\|1835360_1835921_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997036.1\|1841693_1842497_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	7.1e-39	36.2
WP_000648555.1\|1842493_1843408_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230981.1\|1843648_1844449_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000211706.1\|1844526_1845297_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644685.1\|1845344_1846703_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052720.1\|1846774_1847530_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001307587.1\|1847563_1848286_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|1848282_1848750_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001297205.1\|1848814_1849546_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
WP_001053629.1\|1850084_1850870_+	hypothetical protein	NA	NA	NA	NA
WP_001236634.1\|1851006_1851486_-	hypothetical protein	NA	NA	NA	NA
WP_072038402.1\|1851495_1852332_-	hypothetical protein	NA	NA	NA	NA
WP_001121440.1\|1852417_1853449_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_001059850.1\|1853501_1853951_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_171765180.1\|1853947_1855000_-	DNA polymerase IV	NA	NA	NA	NA
WP_105241860.1\|1855061_1855919_+	recombinase family protein	NA	NA	NA	NA
WP_001088287.1\|1855972_1856647_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_000631709.1\|1856643_1856991_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
WP_105241861.1\|1857010_1858612_+\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-148	52.9
WP_075330163.1\|1859380_1859938_-	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	4.6e-13	35.5
WP_088895413.1\|1861124_1862353_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	8.5e-177	99.0
WP_001121440.1\|1862390_1863422_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_001118004.1\|1864498_1865269_-	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_000532694.1\|1865422_1865896_+	C-lysozyme inhibitor	NA	NA	NA	NA
WP_000973104.1\|1865938_1868383_-	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000284050.1\|1868622_1869201_+	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_001225684.1\|1870143_1870884_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000615975.1\|1871039_1871318_-	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
WP_000729704.1\|1871320_1871581_-	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
WP_000543886.1\|1871766_1872540_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.2e-19	37.7
WP_000207556.1\|1874277_1875063_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_000640586.1\|1875214_1875985_-	hypothetical protein	A0A0F6TIY9	Escherichia_coli_O157_typing_phage	1.3e-85	74.0
WP_000881576.1\|1876142_1876805_-	hypothetical protein	NA	NA	NA	NA
WP_086021050.1\|1876878_1877723_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_004996944.1\|1877768_1877963_-	hypothetical protein	NA	NA	NA	NA
WP_005011356.1\|1877943_1878975_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_004975014.1\|1879254_1879464_+	hypothetical protein	NA	NA	NA	NA
WP_001344294.1\|1879578_1879890_+	hypothetical protein	NA	NA	NA	NA
WP_105241862.1\|1879993_1881130_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_105241864.1\|1883624_1886597_+	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_001224611.1\|1886597_1887488_+	DUF4434 family protein	NA	NA	NA	NA
WP_001177464.1\|1887670_1888432_+	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
WP_000805428.1\|1888796_1889429_+	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
WP_167551154.1\|1889798_1891026_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.5e-173	98.6
WP_000691066.1\|1891291_1892299_-	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_105241865.1\|1892311_1894921_-	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_000988388.1\|1894951_1895644_-	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_000729161.1\|1896885_1897752_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000190288.1\|1897753_1897966_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_001143536.1\|1898073_1898595_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_000912345.1\|1898630_1900016_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8

DBSCAN-SWA_12

2038228 : 2157592

104

Bacillus_phage(13.51%)

tRNA,transposase,integrase

attL 2091860:2091919|attR 2155563:2156721

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000667319.1\|2038228_2039356_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.1e-89	46.1
WP_001266491.1\|2039410_2040481_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001009879.1\|2040573_2041155_+	ACP phosphodiesterase	NA	NA	NA	NA
WP_005011693.1\|2041159_2042977_-	maltodextrin glucosidase	NA	NA	NA	NA
WP_001295329.1\|2043132_2044506_-	proline-specific permease ProY	NA	NA	NA	NA
WP_000149643.1\|2044581_2045901_-	branched-chain amino acid transporter carrier protein BrnQ	NA	NA	NA	NA
WP_000893603.1\|2046306_2047602_-	phosphate regulon sensor histidine kinase PhoR	W8CYF6	Bacillus_phage	1.3e-26	30.8
WP_000113933.1\|2047659_2048349_-	phosphate response regulator transcription factor PhoB	W8CYM9	Bacillus_phage	4.4e-37	38.0
WP_001221343.1\|2048538_2049741_+	exonuclease subunit SbcD	R4JGS2	Bacillus_phage	2.4e-06	32.4
WP_000698845.1\|2049737_2052881_+	exonuclease subunit SbcC	G3MAB6	Bacillus_virus	5.8e-12	26.9
WP_001306939.1\|2053006_2054191_+	MFS transporter AraJ	NA	NA	NA	NA
WP_001219296.1\|2054338_2055241_-	fructokinase	NA	NA	NA	NA
WP_001298537.1\|2055365_2056277_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.7e-103	63.6
WP_000194199.1\|2056354_2056810_-	hypothetical protein	NA	NA	NA	NA
WP_000941942.1\|2057295_2057580_-	pyrimidine/purine nucleoside phosphorylase	NA	NA	NA	NA
WP_001276420.1\|2057651_2058329_-	AroM family protein	NA	NA	NA	NA
WP_001142439.1\|2058586_2058778_-	protein YaiA	NA	NA	NA	NA
WP_000193393.1\|2058827_2059352_-	shikimate kinase AroL	NA	NA	NA	NA
WP_000158111.1\|2059534_2059993_-	YaiI/YqxD family protein	NA	NA	NA	NA
WP_005011778.1\|2060112_2060922_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_000484048.1\|2060938_2062054_-	diguanylate cyclase AdrA	A0A127AWB9	Bacillus_phage	1.1e-18	34.5
WP_005011795.1\|2062594_2064010_-	alkaline phosphatase	NA	NA	NA	NA
WP_000792970.1\|2064110_2064371_-	anti-adapter protein IraP	NA	NA	NA	NA
WP_039072083.1\|2064832_2065927_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_001295334.1\|2065950_2066163_-	DUF2754 domain-containing protein	NA	NA	NA	NA
WP_000763148.1\|2066422_2066731_+	DUF2755 family protein	NA	NA	NA	NA
WP_000092043.1\|2066789_2067884_-	surface-exposed outer membrane lipoprotein YaiW	NA	NA	NA	NA
WP_001297134.1\|2067896_2069117_-	peptide antibiotic transporter SbmA	NA	NA	NA	NA
WP_000830756.1\|2069468_2070626_+	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	A0A2H4JAN9	uncultured_Caudovirales_phage	1.0e-06	22.5
WP_088895425.1\|2072616_2073844_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_086021050.1\|2074525_2075369_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005011749.1\|2075358_2076102_-	hypothetical protein	NA	NA	NA	NA
WP_001295337.1\|2076624_2077599_+	porphobilinogen synthase	NA	NA	NA	NA
WP_004997068.1\|2077655_2078549_-	taurine dioxygenase	NA	NA	NA	NA
WP_000114617.1\|2078545_2079373_-	taurine ABC transporter permease TauC	NA	NA	NA	NA
WP_000939361.1\|2079369_2080137_-	taurine ABC transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	5.0e-26	40.3
WP_001317652.1\|2080149_2081112_-	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000362029.1\|2081727_2082399_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_005011738.1\|2082408_2083605_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_024183734.1\|2083582_2084164_+	acetyltransferase	NA	NA	NA	NA
WP_000596097.1\|2084165_2084306_+	hypothetical protein	NA	NA	NA	NA
WP_086021050.1\|2084302_2085147_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005038971.1\|2086134_2087331_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001141271.1\|2087492_2087768_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000842090.1\|2087802_2088912_+	S-(hydroxymethyl)glutathione dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	5.2e-32	28.6
WP_105241875.1\|2089003_2089837_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_072971588.1\|2089962_2090502_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_086021023.1\|2090955_2091800_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
2091860:2091919	attL	NA	NA	NA	NA
WP_001121440.1\|2091963_2092995_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_158250166.1\|2092975_2093116_+	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|2094918_2096070_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000747051.1\|2095989_2096340_-\|transposase	transposase	Q716C1	Shigella_phage	1.8e-39	98.9
WP_000662258.1\|2097439_2097541_+	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|2098383_2099535_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001350215.1\|2101357_2101717_+	hypothetical protein	NA	NA	NA	NA
WP_000284450.1\|2101709_2102252_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_000617443.1\|2102855_2103137_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000378127.1\|2103558_2103885_+	hypothetical protein	NA	NA	NA	NA
WP_001236873.1\|2103811_2103997_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000560496.1\|2104991_2105381_+	hypothetical protein	NA	NA	NA	NA
WP_105241876.1\|2105399_2107481_-	injection protein	A0A2I7QQN9	Vibrio_phage	2.1e-90	37.0
WP_086021023.1\|2107560_2108404_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_001121440.1\|2109526_2110558_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000909175.1\|2110998_2111676_-	hypothetical protein	Q2A0B2	Sodalis_phage	9.2e-56	71.6
WP_000420674.1\|2111669_2112131_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-61	72.2
WP_001018524.1\|2112147_2112309_-	hypothetical protein	NA	NA	NA	NA
WP_001585368.1\|2112893_2115650_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.8e-299	57.3
WP_001208878.1\|2115636_2116008_-	hypothetical protein	NA	NA	NA	NA
WP_000628967.1\|2116000_2116342_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.5e-33	61.5
WP_001058748.1\|2116352_2116955_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.6e-25	36.3
WP_000181940.1\|2116947_2117169_-	hypothetical protein	NA	NA	NA	NA
WP_001024675.1\|2117165_2117429_-	hypothetical protein	NA	NA	NA	NA
WP_001065741.1\|2117425_2117620_-	hypothetical protein	NA	NA	NA	NA
WP_000958750.1\|2117612_2118680_-	ash family protein	NA	NA	NA	NA
WP_000476150.1\|2118673_2118856_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001019376.1\|2118848_2119682_-	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
WP_001035842.1\|2119694_2120126_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	5.1e-28	49.0
WP_000083330.1\|2120125_2120323_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	1.7e-07	48.1
WP_000251023.1\|2120520_2121402_-	hypothetical protein	NA	NA	NA	NA
WP_000772642.1\|2121544_2122759_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	7.5e-133	56.5
WP_000893316.1\|2123114_2124368_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.2
WP_001285288.1\|2124379_2125483_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749871.1\|2125770_2126826_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.9e-117	60.6
WP_000174677.1\|2126864_2127266_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000189556.1\|2127323_2128568_-	esterase FrsA	NA	NA	NA	NA
WP_001291990.1\|2128659_2129118_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_001293009.1\|2129378_2130836_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_000602104.1\|2130892_2131507_-	peptide chain release factor H	NA	NA	NA	NA
WP_000528865.1\|2131503_2132643_-	RNA ligase RtcB family protein	A0A222ZKP1	Mycobacterium_phage	4.5e-31	31.1
WP_105241877.1\|2133996_2138736_-	PAAR domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	4.4e-19	32.5
WP_001160804.1\|2138755_2139217_-	DcrB-related protein	NA	NA	NA	NA
WP_000253844.1\|2140771_2142229_-	Cu(+)/Ag(+) sensor histidine kinase CusS	A0A1V0SGX0	Hokovirus	3.9e-11	26.1
WP_000770953.1\|2142218_2142902_-	copper response regulator transcription factor CusR	W8CYM9	Bacillus_phage	1.0e-30	35.1
WP_000074197.1\|2143058_2144441_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC	NA	NA	NA	NA
WP_000709882.1\|2144464_2144797_+	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF	NA	NA	NA	NA
WP_000717143.1\|2144812_2146036_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA
WP_105241878.1\|2146047_2149191_+	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	S5VTK5	Leptospira_phage	3.7e-59	22.1
WP_000786320.1\|2149292_2150669_+	phenylalanine transporter	NA	NA	NA	NA
WP_001153148.1\|2150736_2151984_-	mechanosensitive ion channel YbdG	NA	NA	NA	NA
WP_000351480.1\|2152091_2152745_-	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
WP_000360937.1\|2152838_2153207_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_000682523.1\|2153271_2153520_-	DUF1158 domain-containing protein	NA	NA	NA	NA
WP_001121440.1\|2154486_2155518_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_087522250.1\|2156222_2157592_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5
2155563:2156721	attR	NA	NA	NA	NA

DBSCAN-SWA_13

2209697 : 2277673

Paenibacillus_phage(13.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157901.1\|2209697_2212280_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	7.5e-183	42.1
WP_001044880.1\|2212514_2212997_+	zinc ribbon-containing protein	NA	NA	NA	NA
WP_000367027.1\|2214208_2214916_+	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_086021050.1\|2216127_2216971_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_105241882.1\|2217005_2218037_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001035673.1\|2218422_2218977_-	sel1 repeat family protein	NA	NA	NA	NA
WP_001030920.1\|2219078_2219786_+	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_005013481.1\|2219782_2221234_+	co-chaperone DjlC	NA	NA	NA	NA
WP_000367883.1\|2221293_2222964_-	molecular chaperone HscC	E5ESM6	Bathycoccus_sp._RCC1105_virus	3.0e-76	32.6
WP_001207527.1\|2223047_2223983_-	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA
WP_000631384.1\|2224100_2224826_-	glutamate/aspartate ABC transporter ATP binding protein GltL	G9BWD6	Planktothrix_phage	7.6e-32	38.6
WP_000272818.1\|2224825_2225500_-	glutamate/aspartate ABC transporter permease GltK	NA	NA	NA	NA
WP_000853064.1\|2229674_2231213_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_001278607.1\|2231237_2232116_-	CNNM family magnesium/cobalt transport protein CorC	NA	NA	NA	NA
WP_000084472.1\|2232205_2232673_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_001018040.1\|2232669_2233710_-	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	4.1e-47	46.6
WP_000162740.1\|2233862_2235287_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_000184562.1\|2235432_2236608_+	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	NA	NA	NA	NA
WP_000337061.1\|2237909_2239574_-	asparagine synthase B	A9YVS6	Ostreococcus_tauri_virus	6.7e-84	38.8
WP_000187601.1\|2240769_2241990_-	DNA-binding transcriptional regulator NagC	NA	NA	NA	NA
WP_000271195.1\|2241998_2243147_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_001237072.1\|2243206_2244007_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_001023135.1\|2244338_2246285_+	PTS N-acetyl glucosamine transporter subunit IIABC	A0A2I7SAJ6	Vibrio_phage	9.2e-08	47.3
WP_001287165.1\|2246543_2248208_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	0.0e+00	98.6
WP_000649027.1\|2248370_2248538_-	hypothetical protein	NA	NA	NA	NA
WP_089590740.1\|2248795_2250202_+	chitoporin	NA	NA	NA	NA
WP_000733592.1\|2250251_2250578_+	hypothetical protein	NA	NA	NA	NA
WP_000131702.1\|2250661_2251108_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA
WP_001406816.1\|2251100_2251187_-	fur leader peptide	NA	NA	NA	NA
WP_001018618.1\|2251396_2251927_-	flavodoxin FldA	NA	NA	NA	NA
WP_001300829.1\|2252066_2252360_-	LexA regulated protein	NA	NA	NA	NA
WP_000773301.1\|2252499_2253264_-	esterase	A0A1J0GVH7	Mycobacterium_phage	4.4e-06	35.4
WP_001424151.1\|2253448_2253994_+	replication initiation negative regulator SeqA	NA	NA	NA	NA
WP_001297249.1\|2254019_2255660_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_005012122.1\|2256797_2257994_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000040198.1\|2258481_2260680_-	ornithine decarboxylase SpeF	NA	NA	NA	NA
WP_001171592.1\|2260802_2261060_+	hypothetical protein	NA	NA	NA	NA
WP_000186087.1\|2261275_2261953_-	two-component system response regulator KdpE	W8CYM9	Bacillus_phage	2.0e-26	30.6
WP_004997582.1\|2261949_2264634_-	two-component system sensor histidine kinase KdbD	A0A1V0SGX0	Hokovirus	5.0e-12	26.8
WP_004997579.1\|2264626_2265199_-	K(+)-transporting ATPase subunit C	NA	NA	NA	NA
WP_105241884.1\|2265207_2267256_-	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	8.4e-28	23.1
WP_000730080.1\|2267278_2268952_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_032336058.1\|2268951_2269041_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_000424925.1\|2269353_2269560_+	YbfA family protein	NA	NA	NA	NA
WP_105241885.1\|2269800_2273448_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	2.2e-10	41.2
WP_001143980.1\|2273526_2274720_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	1.2e-138	62.5
WP_094110437.1\|2275091_2275936_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.6e-23	50.0
WP_138974787.1\|2276015_2276180_+	hypothetical protein	NA	NA	NA	NA
WP_105241886.1\|2276176_2276626_+	hypothetical protein	NA	NA	NA	NA
WP_105241887.1\|2276641_2277673_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

2335724 : 2364851

Escherichia_phage(34.48%)

transposase,integrase,lysis,terminase,capsid,holin

attL 2337003:2337017|attR 2345194:2345208

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000891698.1\|2335724_2336783_+	molybdenum ABC transporter ATP-binding protein ModC	G9BWD6	Planktothrix_phage	2.6e-20	35.9
WP_000213425.1\|2336783_2337602_-	bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase	NA	NA	NA	NA
2337003:2337017	attL	NA	NA	NA	NA
WP_005033876.1\|2337837_2338884_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	K7PHK0	Enterobacteria_phage	9.4e-76	44.5
WP_000276807.1\|2339177_2339366_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	8.8e-17	93.5
WP_001173292.1\|2339416_2340514_-	AAA family ATPase	I6PCV5	Cronobacter_phage	2.9e-184	84.7
WP_001277359.1\|2340519_2340816_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-41	83.5
WP_001068999.1\|2343199_2343481_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	2.0e-09	55.8
WP_000935589.1\|2343497_2344346_-	Rha family phage regulatory protein	A0A0P0ZE80	Stx2-converting_phage	6.7e-56	57.5
WP_001121440.1\|2344863_2345895_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
2345194:2345208	attR	NA	NA	NA	NA
WP_001005969.1\|2346181_2346385_-	hypothetical protein	I6PDF6	Cronobacter_phage	6.6e-10	80.0
WP_001091983.1\|2346386_2346542_-	DUF1391 family protein	M4QQ57	Salicola_phage	1.8e-07	53.2
WP_000787424.1\|2346744_2347152_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.7e-28	49.6
WP_000912291.1\|2347228_2347456_+	transcriptional regulator	NA	NA	NA	NA
WP_000702036.1\|2347439_2347862_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	3.8e-68	93.6
WP_105241894.1\|2347939_2348722_+	hypothetical protein	G9L6A8	Escherichia_phage	3.2e-44	66.0
WP_000789009.1\|2348728_2349475_+	ATP-binding protein	V5UQI5	Shigella_phage	2.0e-112	81.7
WP_001118167.1\|2349489_2349912_+	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	5.9e-53	76.6
WP_024259128.1\|2349969_2350326_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	2.5e-57	96.6
WP_012421537.1\|2350494_2351160_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000882657.1\|2351330_2351543_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	4.0e-26	90.0
WP_000687440.1\|2351792_2352080_+	hypothetical protein	NA	NA	NA	NA
WP_000940326.1\|2352118_2352718_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	6.5e-106	92.0
WP_000228005.1\|2352717_2353008_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	9.6e-47	88.5
WP_000640122.1\|2353004_2353559_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.5e-68	69.1
WP_000284485.1\|2354738_2354954_+\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	4.2e-31	91.5
WP_000075178.1\|2354953_2355451_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	2.9e-91	98.2
WP_000092288.1\|2355447_2355918_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	1.4e-71	93.5
WP_011069285.1\|2356006_2356519_-	VTT domain-containing protein	NA	NA	NA	NA
WP_001118113.1\|2356713_2357478_+	hypothetical protein	G8C7P2	Escherichia_phage	5.9e-11	53.8
WP_001300443.1\|2357428_2358832_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.2e-187	69.0
WP_000113499.1\|2358831_2360298_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.3e-260	91.2
WP_000184977.1\|2360188_2360932_+\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	5.3e-89	84.4
WP_105241895.1\|2360935_2362156_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	4.2e-208	91.0
WP_001066726.1\|2362159_2362492_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	6.9e-49	89.2
WP_001121440.1\|2362507_2363539_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_105241896.1\|2364719_2364851_+	DNA invertase	A0A0C4UR34	Shigella_phage	2.0e-07	81.2

DBSCAN-SWA_15

2498457 : 2560704

uncultured_Mediterranean_phage(10.53%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000520781.1\|2498457_2498778_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_105241902.1\|2498808_2501085_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	3.7e-165	42.2
WP_001040187.1\|2501770_2501989_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241678.1\|2502273_2502978_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202162.1\|2503019_2504741_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	4.9e-21	25.2
WP_001043612.1\|2504741_2506508_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	5.4e-23	24.3
WP_000537416.1\|2506630_2507596_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.5e-63	44.6
WP_000228473.1\|2508139_2508634_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000077004.1\|2508768_2513040_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.3e-86	48.7
WP_005035852.1\|2513198_2513810_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067767.1\|2513820_2515164_+	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_000886681.1\|2515254_2516547_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.1e-94	48.2
WP_105241903.1\|2519241_2519859_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	60.1
WP_000534690.1\|2519860_2520724_+	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_004967157.1\|2521090_2521765_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_000631725.1\|2521761_2522109_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_005010168.1\|2523810_2525157_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072038244.1\|2525233_2526547_+	amino acid permease	NA	NA	NA	NA
WP_001242665.1\|2527708_2528617_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001190384.1\|2528716_2529307_+	NAD(P)H oxidoreductase	NA	NA	NA	NA
WP_000111043.1\|2529388_2530129_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
WP_001292794.1\|2530320_2532603_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	4.9e-162	41.2
WP_000642553.1\|2532657_2533515_-	formate transporter FocA	NA	NA	NA	NA
WP_105242096.1\|2533920_2535681_-	YcaO-like family protein	NA	NA	NA	NA
WP_000642852.1\|2535810_2536503_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057149.1\|2536701_2537790_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.5e-81	46.8
WP_000445231.1\|2537860_2539144_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_000483770.1\|2539269_2540616_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000926028.1\|2540823_2542671_+	L,D-transpeptidase	NA	NA	NA	NA
WP_001605195.1\|2542851_2543400_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
WP_001109488.1\|2543426_2544074_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA
WP_000462666.1\|2544295_2545486_-	aspartate transaminase	NA	NA	NA	NA
WP_000483769.1\|2545702_2547049_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000977920.1\|2547106_2548195_-	porin OmpF	Q1MVN1	Enterobacteria_phage	1.8e-98	54.3
WP_000117880.1\|2548796_2550197_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	6.9e-82	36.1
WP_005013395.1\|2550365_2551568_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000193831.1\|2551833_2554446_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	5.3e-19	22.8
WP_001090522.1\|2554652_2555420_-	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.7e-30	38.0
WP_000235203.1\|2555416_2556208_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_000055968.1\|2556219_2557110_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_001244331.1\|2557106_2558066_-	aliphatic sulfonate ABC transporter substrate-binding protein SsuA	NA	NA	NA	NA
WP_001263932.1\|2558058_2558634_-	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_000750284.1\|2558989_2559532_+	fimbrial protein	NA	NA	NA	NA
WP_005010759.1\|2559672_2560704_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2578816 : 2701895

105

Escherichia_phage(26.83%)

protease,transposase,integrase

attL 2624040:2624099|attR 2659142:2660362

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156472.1\|2578816_2580577_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877161.1\|2580762_2581215_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_004991512.1\|2581290_2582346_-	porin OmpA	NA	NA	NA	NA
WP_000288718.1\|2582702_2583212_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_000839153.1\|2583430_2584060_+	CRP-S regulon transcriptional coactivator Sxy	NA	NA	NA	NA
WP_000875029.1\|2584022_2586185_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261233.1\|2586194_2586641_-	YccF domain-containing protein	NA	NA	NA	NA
WP_005011496.1\|2586763_2588818_+	DNA helicase IV	A7KV33	Bacillus_phage	6.5e-20	27.3
WP_000424181.1\|2588849_2589308_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847784.1\|2589403_2590066_-	DUF2057 family protein	NA	NA	NA	NA
WP_000665217.1\|2590238_2590652_+	CoA-binding protein	NA	NA	NA	NA
WP_001295356.1\|2590696_2591014_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000116305.1\|2591071_2592262_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000048239.1\|2592356_2592635_+	acylphosphatase	NA	NA	NA	NA
WP_000904442.1\|2592631_2592961_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000375136.1\|2593051_2593711_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	4.0e-48	55.3
WP_004999783.1\|2594431_2595550_+	hydrogenase 1 small subunit	NA	NA	NA	NA
WP_000107371.1\|2595546_2597340_+	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_001186413.1\|2597358_2598066_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000003674.1\|2598062_2598650_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
WP_000069878.1\|2598646_2599045_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
WP_000263585.1\|2600031_2601576_+	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
WP_000460803.1\|2601587_2602724_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_000270305.1\|2602736_2602829_+	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
WP_024258952.1\|2602904_2604203_+	bifunctional acid phosphatase/4-phytase	NA	NA	NA	NA
WP_000208624.1\|2604322_2606503_-	tyrosine-protein kinase	NA	NA	NA	NA
WP_000057871.1\|2606522_2606969_-	protein-tyrosine-phosphatase Etp	NA	NA	NA	NA
WP_004991465.1\|2606956_2608096_-	polysaccharide export protein	NA	NA	NA	NA
WP_060634440.1\|2608141_2610238_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_001038078.1\|2610237_2610984_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_001247610.1\|2610980_2611625_-	lipoprotein GfcB	NA	NA	NA	NA
WP_004999748.1\|2611731_2612037_-	hypothetical protein	NA	NA	NA	NA
WP_000087763.1\|2612478_2612691_-	cold shock-like protein CspH	NA	NA	NA	NA
WP_000066490.1\|2612976_2613189_+	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	7.8e-22	71.4
WP_072038325.1\|2613199_2613388_+	cold-shock protein	NA	NA	NA	NA
WP_032336090.1\|2613362_2613593_+	protein YmcE	NA	NA	NA	NA
WP_001019197.1\|2613582_2613756_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_072038322.1\|2614947_2617692_-	TMAO reductase system sensor histidine kinase/response regulator TorS	A0A1V0SGX0	Hokovirus	7.0e-38	32.2
WP_001121440.1\|2617764_2618796_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000420625.1\|2619119_2620040_+	curved DNA-binding protein	A0A1V0SIM1	Klosneuvirus	4.2e-11	43.0
WP_000024560.1\|2620039_2620345_+	chaperone modulator CbpM	NA	NA	NA	NA
WP_000209856.1\|2620437_2621037_-	molecular chaperone TorD	NA	NA	NA	NA
WP_105241904.1\|2621033_2623580_-	trimethylamine-N-oxide reductase TorA	A0A077SK27	Escherichia_phage	1.5e-71	31.0
2624040:2624099	attL	NA	NA	NA	NA
WP_001254932.1\|2624101_2625253_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001120112.1\|2627345_2628038_+	two-component system response regulator TorR	W8CYM9	Bacillus_phage	4.5e-18	28.0
WP_005010277.1\|2628305_2629652_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001121440.1\|2630611_2631643_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_105241905.1\|2631702_2632953_+	YccE family protein	NA	NA	NA	NA
WP_001143120.1\|2634523_2634751_-	hypothetical protein	NA	NA	NA	NA
WP_000111568.1\|2634771_2635377_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_105241906.1\|2635430_2636789_+	recombinase family protein	NA	NA	NA	NA
WP_000631709.1\|2637840_2638188_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
WP_005002356.1\|2638207_2639809_+\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-147	61.2
WP_004967157.1\|2639952_2640627_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_000631725.1\|2640623_2640971_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001254932.1\|2642581_2643733_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000930140.1\|2646009_2646633_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	8.4e-80	75.9
WP_001039888.1\|2646632_2646812_+	hypothetical protein	NA	NA	NA	NA
WP_105241907.1\|2646812_2648576_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_000533659.1\|2649138_2650212_-\|integrase	tyrosine-type recombinase/integrase	K7PHK0	Enterobacteria_phage	1.0e-194	96.4
WP_001303849.1\|2650189_2650408_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_105242100.1\|2650506_2651734_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000235316.1\|2651828_2652485_-	ORF6N domain-containing protein	A0A088CD42	Shigella_phage	1.6e-76	70.3
WP_001095964.1\|2652810_2653593_-	ORF6N domain-containing protein	A0A2R2Z302	Escherichia_phage	2.4e-44	67.6
WP_000457738.1\|2653735_2653978_-	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	3.4e-29	80.0
WP_105241908.1\|2654062_2654458_-	hypothetical protein	A0A193GYM6	Enterobacter_phage	1.2e-36	60.5
WP_032336156.1\|2657087_2657663_-	DUF551 domain-containing protein	A0A088CPS0	Enterobacteria_phage	2.9e-58	68.4
WP_000747051.1\|2657717_2658068_+\|transposase	transposase	Q716C1	Shigella_phage	1.8e-39	98.9
WP_001254932.1\|2657987_2659139_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000459725.1\|2661406_2661757_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	1.0e-58	99.1
2659142:2660362	attR	NA	NA	NA	NA
WP_000995347.1\|2661774_2662056_-	host nuclease inhibitor GamL	A0A2R2Z319	Escherichia_phage	6.5e-48	98.9
WP_000934194.1\|2662076_2662358_-	hypothetical protein	A0A0P0ZGC3	Escherichia_phage	3.1e-42	94.6
WP_000917251.1\|2662369_2662582_-	hypothetical protein	A0A0P0ZGD1	Escherichia_phage	2.2e-32	98.6
WP_075329961.1\|2662652_2663543_-	Rha family phage regulatory protein	A0A0H4IQ68	Shigella_phage	4.7e-92	71.1
WP_000513533.1\|2664198_2664447_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_001016018.1\|2664443_2664788_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_164834428.1\|2664902_2665073_-	hypothetical protein	NA	NA	NA	NA
WP_000162429.1\|2665194_2665914_-	LexA family transcriptional regulator	A0A2R2X2B0	Escherichia_phage	1.3e-87	69.9
WP_000171144.1\|2666019_2666259_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005011604.1\|2666421_2666607_+	hypothetical protein	NA	NA	NA	NA
WP_000470023.1\|2666784_2667171_+	hypothetical protein	A0A286S263	Klebsiella_phage	2.6e-23	44.8
WP_000912605.1\|2667164_2668670_+	DEAD/DEAH box helicase	A0A2R2Z335	Escherichia_phage	2.6e-292	98.8
WP_001254932.1\|2669569_2670721_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000187062.1\|2671712_2672402_+	YqaJ viral recombinase family protein	A0A2R2Z325	Escherichia_phage	1.3e-134	99.1
WP_001254932.1\|2674016_2675168_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001121440.1\|2676379_2677411_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000268371.1\|2678260_2678809_-	recombinase family protein	G8I4U3	Mycobacterium_phage	2.7e-21	36.1
WP_001273658.1\|2679755_2679929_+	general stress protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
WP_004999727.1\|2680186_2681515_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	5.3e-233	98.4
WP_001028095.1\|2681535_2682030_-	pyrimidine utilization flavin reductase protein F	Q9KX93	Enterobacteria_phage	5.0e-51	97.9
WP_001001110.1\|2682040_2682631_-	malonic semialdehyde reductase	NA	NA	NA	NA
WP_001400595.1\|2682640_2683441_-	pyrimidine utilization protein D	NA	NA	NA	NA
WP_001126789.1\|2683448_2683835_-	pyrimidine utilization protein C	NA	NA	NA	NA
WP_024258950.1\|2683846_2684539_-	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	NA	NA	NA	NA
WP_004999719.1\|2684538_2685630_-	pyrimidine utilization protein A	NA	NA	NA	NA
WP_000191700.1\|2685917_2686556_+	HTH-type transcriptional regulator RutR	NA	NA	NA	NA
WP_005011657.1\|2686595_2690558_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000979516.1\|2690612_2690822_+	hypothetical protein	NA	NA	NA	NA
WP_001018490.1\|2690980_2692489_+	sodium/proline symporter PutP	NA	NA	NA	NA
WP_000154398.1\|2693986_2695114_+	iron uptake system protein EfeO	NA	NA	NA	NA
WP_105241910.1\|2695119_2696352_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_171765191.1\|2696972_2697761_+	phosphate starvation-inducible protein PhoH	R4II13	Cronobacter_phage	6.0e-91	76.7
WP_000225124.1\|2698569_2699025_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_000140459.1\|2699155_2700352_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001143980.1\|2700701_2701895_-\|transposase	IS4 family transposase	S5FM71	Shigella_phage	1.2e-138	62.5

DBSCAN-SWA_17

2802535 : 2888879

Escherichia_phage(28.89%)

tRNA,transposase,head,terminase,portal,lysis,capsid,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004976564.1\|2802535_2803642_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|2803695_2804157_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248691.1\|2804166_2804820_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|2804991_2806242_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_024258980.1\|2806344_2806668_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	2.6e-40	64.5
WP_000140459.1\|2806976_2808173_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_032143442.1\|2808655_2808766_-	hypothetical protein	NA	NA	NA	NA
WP_001121440.1\|2809041_2810073_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000813256.1\|2810787_2810943_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	5.0e-18	98.0
WP_001429486.1\|2811400_2811679_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.3e-12	48.4
WP_001265033.1\|2811680_2812730_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.2e-109	54.6
WP_000904114.1\|2812742_2813117_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.1e-34	62.7
WP_000762890.1\|2813113_2813935_+	antitermination protein	K7P7B9	Enterobacteria_phage	6.1e-78	58.6
WP_000562553.1\|2814789_2814921_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_000506936.1\|2815287_2815716_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_001348108.1\|2815887_2816262_+	hypothetical protein	NA	NA	NA	NA
WP_000839561.1\|2816513_2816729_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	5.9e-33	95.8
WP_000192455.1\|2816733_2817048_+	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	4.5e-50	96.2
WP_001274718.1\|2817103_2817637_+	lysozyme	K7PLY1	Enterobacteria_phage	9.6e-101	98.3
WP_000091905.1\|2817633_2818098_+\|lysis	lysis protein	A0A1B5FPA1	Escherichia_phage	3.1e-63	85.8
WP_105241914.1\|2818140_2818491_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.4e-63	97.4
WP_024258328.1\|2818637_2819120_+\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	1.1e-84	98.1
WP_000811487.1\|2820873_2821035_+	hypothetical protein	NA	NA	NA	NA
WP_059242548.1\|2821024_2822251_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	5.3e-203	82.8
WP_000999828.1\|2822243_2822843_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.9e-89	81.0
WP_000766109.1\|2822857_2824075_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	5.9e-162	71.6
WP_000719066.1\|2824151_2824469_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	6.2e-23	50.5
WP_105241915.1\|2824477_2824816_+\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	1.2e-51	93.8
WP_032333424.1\|2824812_2825262_+	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	6.1e-64	81.9
WP_001206304.1\|2825258_2825603_+	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	4.6e-56	98.2
WP_000097532.1\|2825662_2826367_+	immunoglobulin domain-containing protein	A0A1B5FP82	Escherichia_phage	1.8e-118	96.6
WP_000164661.1\|2826381_2826753_+\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.5e-64	100.0
WP_171765184.1\|2826776_2827055_+	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.1e-42	96.7
WP_001254932.1\|2830796_2831948_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_105241917.1\|2833136_2833835_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	9.9e-130	97.0
WP_141095323.1\|2834519_2835128_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.7e-101	95.5
WP_001230479.1\|2840109_2840709_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	5.2e-111	98.5
WP_105241919.1\|2840767_2841466_+\|tail	prophage tail fiber N-terminal domain-containing protein	K7PGT9	Enterobacteria_phage	1.4e-59	96.7
WP_088895413.1\|2841507_2842735_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	8.5e-177	99.0
WP_164837515.1\|2845123_2845543_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.0e-70	94.9
WP_000358619.1\|2846026_2846740_+	cytolethal distending toxin type I subunit CdtA	A5LH52	Enterobacteria_phage	2.9e-137	100.0
WP_000734593.1\|2846736_2847558_+	cytolethal distending toxin type I nuclease subunit CdtB	A5LH53	Enterobacteria_phage	1.5e-153	100.0
WP_000859545.1\|2847554_2848127_+	cytolethal distending toxin type I subunit CdtC	A5LH54	Enterobacteria_phage	5.3e-105	98.9
WP_048816332.1\|2849096_2849627_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.2e-55	99.1
WP_001254932.1\|2850513_2851665_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001007788.1\|2852459_2853110_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_000384037.1\|2854146_2854287_-	hypothetical protein	NA	NA	NA	NA
WP_001121440.1\|2854267_2855299_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_005012432.1\|2855382_2856453_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-37	35.7
WP_001240091.1\|2857011_2857647_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_000740078.1\|2857647_2858652_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_000920127.1\|2858760_2859174_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001339045.1\|2859306_2859978_+	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000826730.1\|2859977_2861336_+	two-component system sensor histidine kinase HprS	Q8QKV7	Ectocarpus_siliculosus_virus	3.9e-05	19.8
WP_000218200.1\|2861443_2862295_-	protein deglycase HchA	NA	NA	NA	NA
WP_094110432.1\|2862855_2863700_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1
WP_000824397.1\|2863803_2864991_-	porin OmpC	Q1MVN1	Enterobacteria_phage	2.9e-105	52.7
WP_001313057.1\|2865557_2865923_+	hypothetical protein	NA	NA	NA	NA
WP_000365562.1\|2865962_2866658_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	28.0
WP_001157213.1\|2866724_2868143_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.0e-101	54.8
WP_000786004.1\|2868123_2868594_+	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	1.5e-33	47.6
WP_001212238.1\|2868582_2869503_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000922690.1\|2869675_2870593_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_000009307.1\|2870671_2870854_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_077901286.1\|2871024_2872719_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000844800.1\|2873827_2874055_-	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000867217.1\|2874217_2874406_+	protein DsrB	NA	NA	NA	NA
WP_000384045.1\|2874449_2875073_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_005010759.1\|2875053_2876085_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000983980.1\|2876512_2877298_-	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000187358.1\|2877306_2877576_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_001253456.1\|2877585_2878323_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_004966878.1\|2878322_2878688_-	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001282098.1\|2878690_2879104_-	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_005013919.1\|2879100_2880105_-	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_000133117.1\|2880109_2880574_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_000620067.1\|2880678_2881806_-	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000807593.1\|2881802_2882246_-	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_039072038.1\|2882264_2883638_-	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_001282702.1\|2883637_2884324_-	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000067950.1\|2884316_2885312_-	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001274300.1\|2887170_2887485_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_005010759.1\|2887847_2888879_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2912700 : 3075304

155

Enterobacteria_phage(31.82%)

tRNA,transposase,lysis,terminase,portal,holin,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000140459.1\|2912700_2913897_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001295647.1\|2914162_2914513_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_001291596.1\|2914515_2915130_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_000906336.1\|2915220_2916108_+	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_000795637.1\|2916104_2917031_+	flagellar motor protein MotB	NA	NA	NA	NA
WP_078126482.1\|2917035_2918868_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_171765185.1\|2918864_2920211_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000147302.1\|2920459_2920963_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_000610396.1\|2921106_2921571_+	Tar ligand binding domain-containing protein	NA	NA	NA	NA
WP_000204312.1\|2924433_2925294_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_105241923.1\|2925296_2926346_+	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	4.6e-06	33.6
WP_000763867.1\|2926360_2926750_+	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000983609.1\|2926760_2927405_+	protein phosphatase CheZ	NA	NA	NA	NA
WP_001278928.1\|2927606_2928755_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_105241924.1\|2928747_2930826_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_004998488.1\|2930884_2931916_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001383257.1\|2932040_2932373_+	flagellar protein FlhE	NA	NA	NA	NA
WP_001307852.1\|2932494_2932983_-	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001025322.1\|2933159_2934893_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	3.4e-86	33.5
WP_001326063.1\|2935108_2935675_+	VOC family protein	NA	NA	NA	NA
WP_001185743.1\|2935688_2936435_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001214305.1\|2936822_2937923_+	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_105241925.1\|2937947_2940377_+	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_000564725.1\|2940541_2941513_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000019588.1\|2941509_2942253_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000252979.1\|2942293_2942689_-	MAPEG family protein	NA	NA	NA	NA
WP_105241926.1\|2942741_2943089_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_105241927.1\|2943159_2944191_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001254932.1\|2945354_2946506_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000148625.1\|2946892_2947234_-	hypothetical protein	A0A1B5FPB3	Escherichia_phage	8.2e-37	74.0
WP_000141096.1\|2947429_2947636_-	hypothetical protein	Q8W651	Enterobacteria_phage	6.4e-29	92.6
WP_000492404.1\|2947775_2948036_+	hypothetical protein	NA	NA	NA	NA
WP_000608407.1\|2948064_2948427_-	helix-turn-helix transcriptional regulator	Q8W649	Enterobacteria_phage	2.6e-57	96.7
WP_000838348.1\|2948523_2949180_-	helix-turn-helix domain-containing protein	Q8W648	Enterobacteria_phage	6.9e-125	98.2
WP_000867913.1\|2950488_2950782_-	hypothetical protein	NA	NA	NA	NA
WP_004998217.1\|2950901_2951609_+	Rha family transcriptional regulator	Q8W645	Enterobacteria_phage	4.2e-96	77.8
WP_001197745.1\|2951628_2951805_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.5e-23	85.7
WP_001300492.1\|2951826_2952186_-	transcriptional regulator	NA	NA	NA	NA
WP_001141116.1\|2952187_2952475_-	hypothetical protein	NA	NA	NA	NA
WP_105241928.1\|2952439_2953378_+	Rha family phage regulatory protein	S5MQL6	Escherichia_phage	2.5e-112	75.7
WP_000618009.1\|2953374_2953608_+	hypothetical protein	A0A1C9II64	Salmonella_phage	1.1e-13	50.0
WP_001247837.1\|2953594_2954503_+	hypothetical protein	Q8W642	Enterobacteria_phage	2.0e-61	97.4
WP_039072146.1\|2954513_2955392_+	ATP-binding protein	Q8W641	Enterobacteria_phage	7.0e-141	96.8
WP_001064800.1\|2956776_2957034_+	hypothetical protein	Q8W639	Enterobacteria_phage	4.9e-34	95.0
WP_001215511.1\|2957033_2957408_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.9e-35	61.3
WP_000762890.1\|2957404_2958226_+	antitermination protein	K7P7B9	Enterobacteria_phage	6.1e-78	58.6
WP_001441762.1\|2958820_2959156_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.0e-44	75.7
WP_000874243.1\|2959416_2959605_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_001323614.1\|2959601_2959763_+	hypothetical protein	Q08JA2	Stx2-converting_phage	5.4e-15	91.3
WP_005014140.1\|2959912_2960128_+\|holin	class II holin family protein	A0A2R2Z340	Escherichia_phage	7.7e-33	97.2
WP_000193253.1\|2960132_2960663_+	YdfR family protein	Q08JA0	Stx2-converting_phage	3.7e-36	52.6
WP_105241929.1\|2960984_2961518_+	lysozyme	Q08J98	Stx2-converting_phage	1.7e-97	93.2
WP_024259025.1\|2961852_2962290_+\|lysis	lysis protein	A0A088CBQ1	Shigella_phage	4.2e-62	89.0
WP_001028468.1\|2962492_2963014_+	KilA-N domain-containing protein	H6WRZ8	Salmonella_phage	7.2e-101	99.4
WP_001205133.1\|2963153_2963330_-	hypothetical protein	NA	NA	NA	NA
WP_000373425.1\|2963687_2964182_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_000934088.1\|2964181_2966284_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	93.9
WP_001072972.1\|2966280_2966493_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-26	87.1
WP_105241930.1\|2966492_2967998_+\|portal	phage portal protein	Q8VNN6	Enterobacteria_phage	1.2e-257	88.0
WP_077901312.1\|2967942_2970003_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	93.8
WP_001097044.1\|2970089_2970413_+	DUF2190 family protein	K7PLV6	Enterobacteria_phage	2.7e-50	97.2
WP_001283159.1\|2970405_2970681_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	4.0e-42	94.5
WP_000677085.1\|2970692_2971277_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	9.9e-91	89.2
WP_004999318.1\|2971273_2971675_+\|tail	tail protein	A5LH34	Enterobacteria_phage	7.8e-71	96.2
WP_000211092.1\|2971685_2972369_+\|tail	tail protein	K7PGT7	Enterobacteria_phage	4.8e-113	87.8
WP_000478927.1\|2972427_2972814_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	1.4e-61	92.2
WP_001161004.1\|2972822_2973152_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-55	99.1
WP_105241931.1\|2973123_2976165_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	86.5
WP_000447264.1\|2976164_2976494_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.4e-57	97.2
WP_001152490.1\|2976493_2977192_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.4e-121	89.7
WP_000194737.1\|2977196_2977940_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.8e-145	94.7
WP_000090877.1\|2977876_2978479_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-88	85.6
WP_105241932.1\|2978539_2982019_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	87.3
WP_001233100.1\|2982086_2982644_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	1.7e-92	85.9
WP_105241933.1\|2982707_2984144_+\|tail	prophage tail fiber N-terminal domain-containing protein	Q8W611	Enterobacteria_phage	1.2e-44	45.6
WP_000551128.1\|2984094_2984718_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	1.2e-78	75.9
WP_001039888.1\|2984717_2984897_+	hypothetical protein	NA	NA	NA	NA
WP_001217553.1\|2987247_2987496_-	DinI-like family protein	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
WP_000140459.1\|2988224_2989421_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000891604.1\|2989612_2989867_-	isochorismatase family protein	NA	NA	NA	NA
WP_001258662.1\|2990176_2991949_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_001308712.1\|2992066_2992519_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_000907250.1\|2992547_2993288_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004999301.1\|2993322_2993844_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	4.5e-10	35.1
WP_001024918.1\|2993845_2994448_-	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001386853.1\|2994518_2994584_+	hypothetical protein	NA	NA	NA	NA
WP_000580331.1\|2994722_2995334_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_000568519.1\|2995342_2996353_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000571460.1\|2996402_2997188_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_000202994.1\|2997184_2997940_-	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	3.8e-18	28.3
WP_001300644.1\|2998018_2998951_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_001184048.1\|2998966_3000289_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_000448381.1\|3000408_3001380_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_000091152.1\|3001510_3002953_-	pyruvate kinase	NA	NA	NA	NA
WP_001056686.1\|3003080_3003938_-	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
WP_000301720.1\|3004275_3005751_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
WP_078166953.1\|3005985_3007797_+	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000800522.1\|3007833_3008475_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_000173505.1\|3008530_3009709_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000257738.1\|3009842_3010133_+	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_001295500.1\|3010199_3010556_+	protein YebF	NA	NA	NA	NA
WP_001254932.1\|3011327_3012479_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001144025.1\|3013409_3014033_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000936942.1\|3014241_3016302_+	oligopeptidase B	NA	NA	NA	NA
WP_000944257.1\|3016298_3016961_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
WP_000011658.1\|3016984_3017641_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_000916767.1\|3017742_3017973_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.8e-14	60.3
WP_000168741.1\|3018111_3018486_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000976480.1\|3019374_3019716_+	YebY family protein	NA	NA	NA	NA
WP_004998488.1\|3021099_3022131_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_077901267.1\|3022305_3022587_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.3e-11	42.4
WP_000276806.1\|3022693_3022882_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	1.5e-16	72.6
WP_001254932.1\|3023601_3024753_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001277359.1\|3026460_3026757_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-41	83.5
WP_077788306.1\|3026734_3028675_-	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	8.1e-190	57.3
WP_000022246.1\|3028698_3028995_-	hypothetical protein	NA	NA	NA	NA
WP_001069000.1\|3029069_3029351_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	2.0e-09	55.8
WP_000935587.1\|3029367_3030210_-	Rha family phage regulatory protein	A0A0P0ZE80	Stx2-converting_phage	2.7e-57	58.5
WP_001005969.1\|3030878_3031082_-	hypothetical protein	I6PDF6	Cronobacter_phage	6.6e-10	80.0
WP_001091983.1\|3031083_3031239_-	DUF1391 family protein	M4QQ57	Salicola_phage	1.8e-07	53.2
WP_000787424.1\|3031441_3031849_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.7e-28	49.6
WP_000912291.1\|3031925_3032153_+	transcriptional regulator	NA	NA	NA	NA
WP_000702036.1\|3032136_3032559_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	3.8e-68	93.6
WP_105241894.1\|3032636_3033419_+	hypothetical protein	G9L6A8	Escherichia_phage	3.2e-44	66.0
WP_000789009.1\|3033425_3034172_+	ATP-binding protein	V5UQI5	Shigella_phage	2.0e-112	81.7
WP_001254932.1\|3035430_3036582_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000403775.1\|3037156_3037513_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
WP_105241936.1\|3037677_3038871_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	5.8e-138	62.0
WP_001224662.1\|3038917_3039100_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_000753060.1\|3039092_3039269_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	6.7e-27	94.8
WP_005032998.1\|3039731_3040763_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_105241937.1\|3040743_3040938_+	hypothetical protein	Q9G078	Enterobacteria_phage	2.1e-13	82.6
WP_000090004.1\|3041047_3041335_-	hypothetical protein	Q3LZN5	Bacteriophage	3.3e-15	49.5
WP_001254932.1\|3042414_3043566_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000218022.1\|3044149_3044707_+	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	1.1e-49	75.0
WP_000284485.1\|3045904_3046120_+\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	4.2e-31	91.5
WP_105241938.1\|3046119_3046617_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	1.4e-90	97.6
WP_004977454.1\|3046613_3047078_+\|lysis	lysis protein	A0A0K2FJD0	Enterobacteria_phage	5.3e-63	85.5
WP_004999231.1\|3047215_3048673_+	potassium transporter TrkG	NA	NA	NA	NA
WP_000089441.1\|3048955_3050047_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	9.6e-148	92.2
WP_000021153.1\|3050036_3051365_+	hypothetical protein	A0A0U2JTW9	Escherichia_phage	9.3e-262	98.4
WP_105241939.1\|3051382_3052819_+	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	1.1e-273	99.6
WP_001254932.1\|3053642_3054794_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000930140.1\|3056867_3057491_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	8.4e-80	75.9
WP_001039888.1\|3057490_3057670_+	hypothetical protein	NA	NA	NA	NA
WP_128622413.1\|3057670_3059386_-	T3SS effector E3 ubiquitin-protein ligase IpaH3	NA	NA	NA	NA
WP_001254932.1\|3060656_3061808_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_005035090.1\|3064710_3064902_-	YebW family protein	NA	NA	NA	NA
WP_004999202.1\|3065336_3066776_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_105241940.1\|3066855_3069489_-	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_005013522.1\|3069457_3070741_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001043882.1\|3070870_3071368_+	L-methionine (R)-S-oxide reductase	NA	NA	NA	NA
WP_000431370.1\|3071464_3072163_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_001055791.1\|3072182_3074231_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
WP_000984521.1\|3074422_3075304_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_19

3280918 : 3410579

Shigella_phage(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001367866.1\|3280918_3282193_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	6.7e-84	41.4
WP_001302086.1\|3282254_3283115_+	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_004994989.1\|3283722_3285069_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001292341.1\|3285434_3286202_+	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
WP_000969783.1\|3286201_3286990_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
WP_000018416.1\|3288409_3288832_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA
WP_000632294.1\|3290050_3291229_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_000039878.1\|3291329_3292280_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
WP_105241952.1\|3292455_3293487_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000097819.1\|3294238_3295099_+	pyridoxine 4-dehydrogenase	NA	NA	NA	NA
WP_005032998.1\|3295195_3296227_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_171765186.1\|3297815_3299043_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	5.0e-177	99.0
WP_000627350.1\|3301784_3303101_+	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_000048948.1\|3303151_3303757_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_000139600.1\|3303957_3307860_+	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	1.9e-52	29.5
WP_001254932.1\|3309533_3310685_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001098549.1\|3313321_3314962_+	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_000414565.1\|3314999_3315923_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000013817.1\|3316139_3317483_+	VOC family protein	NA	NA	NA	NA
WP_000375956.1\|3317707_3319363_+	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_001296778.1\|3319502_3319727_+	YdcH family protein	NA	NA	NA	NA
WP_001491065.1\|3319789_3320329_+	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_004998587.1\|3321419_3322412_+	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_000586711.1\|3322408_3323002_+	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_001261013.1\|3323304_3323973_+	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_075329958.1\|3324007_3325219_-	BenE family transporter YdcO	NA	NA	NA	NA
WP_000429147.1\|3325271_3325808_+	DNA-binding transcriptional regulator SutR	NA	NA	NA	NA
WP_004998589.1\|3325880_3327842_+	23S rRNA 5-hydroxycytidine C2501 synthase	Q6DW11	Phage_TP	2.7e-23	28.3
WP_000494244.1\|3327933_3328164_-	YncJ family protein	NA	NA	NA	NA
WP_000813794.1\|3328385_3328562_+	type II toxin-antitoxin system mRNA interferase toxin HicA	A0A0M3LQ86	Mannheimia_phage	3.6e-12	57.9
WP_001270286.1\|3328607_3329024_+	type II toxin-antitoxin system antitoxin HicB	F1C593	Cronobacter_phage	6.3e-31	57.8
WP_000760608.1\|3329102_3330509_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_000047415.1\|3330753_3331899_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_105241955.1\|3331916_3332930_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	4.6e-27	37.4
WP_000555447.1\|3333837_3334632_+	ABC transporter permease	NA	NA	NA	NA
WP_001254932.1\|3336490_3337642_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_005010759.1\|3338763_3339795_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_105241956.1\|3339932_3340742_+	CatB-related O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.5e-17	41.0
WP_001303494.1\|3341143_3341239_-	stress response membrane protein YncL	NA	NA	NA	NA
WP_000061178.1\|3341433_3341607_+	orphan toxin OrtT	NA	NA	NA	NA
WP_000018633.1\|3341692_3341926_+	YdcY family protein	NA	NA	NA	NA
WP_001076548.1\|3341926_3342376_-	DMT family transporter	NA	NA	NA	NA
WP_000027563.1\|3342372_3342891_-	L-methionine sulfoximine/L-methionine sulfone acetyltransferase	NA	NA	NA	NA
WP_039072206.1\|3343071_3344109_+	NADPH-dependent curcumin/dihydrocurcumin reductase	NA	NA	NA	NA
WP_004998616.1\|3344306_3344972_+	colanic acid/biofilm transcriptional regulator McbR	NA	NA	NA	NA
WP_005011063.1\|3345007_3347026_-	TonB-dependent receptor	A0A1B0VCF0	Salmonella_phage	1.5e-133	65.3
WP_000550677.1\|3347350_3348412_+	YncE family protein	NA	NA	NA	NA
WP_005011057.1\|3348524_3350024_-	L-asparagine permease	NA	NA	NA	NA
WP_001121440.1\|3350360_3351392_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_004998646.1\|3351951_3352620_-	hypothetical protein	NA	NA	NA	NA
WP_001121440.1\|3353128_3354160_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000768398.1\|3354535_3355636_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.8e-138	66.2
WP_011310214.1\|3357006_3360054_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_001240596.1\|3360066_3360951_+	formate dehydrogenase N subunit beta	NA	NA	NA	NA
WP_000045652.1\|3360943_3361597_+	formate dehydrogenase-N subunit gamma	NA	NA	NA	NA
WP_004975840.1\|3361824_3362109_-	HigA family addiction module antidote protein	A0A2L1IV52	Escherichia_phage	1.5e-20	51.1
WP_000642411.1\|3362254_3363265_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	2.1e-24	24.8
WP_000433464.1\|3363398_3365096_-	malate dehydrogenase	NA	NA	NA	NA
WP_000841554.1\|3365251_3365389_-	stationary-phase-induced ribosome-associated protein	NA	NA	NA	NA
WP_000495773.1\|3365490_3365706_-	biofilm-dependent modulation protein	NA	NA	NA	NA
WP_001285535.1\|3366529_3367456_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.1e-14	29.6
WP_005011069.1\|3368196_3368712_-	ABC transporter permease	NA	NA	NA	NA
WP_000830559.1\|3369732_3371283_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001285851.1\|3371356_3371878_-	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA
WP_128868448.1\|3372135_3374532_-	oxygen-sensing cyclic-di-GMP phosphodiesterase	A0A1V0SL97	Klosneuvirus	1.6e-09	22.0
WP_001121440.1\|3376346_3377378_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000350380.1\|3377470_3378790_-	glycoside hydrolase family 10 protein	NA	NA	NA	NA
WP_000246033.1\|3378920_3380456_-	acid resistance gamma-aminobutyrate antiporter GadC	NA	NA	NA	NA
WP_000358940.1\|3380611_3382012_-	glutamate decarboxylase	NA	NA	NA	NA
WP_005011710.1\|3383600_3384632_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000958175.1\|3384728_3385109_-	hypothetical protein	NA	NA	NA	NA
WP_001244994.1\|3385151_3386312_-	insulinase family protein	A0A167R9K4	Powai_lake_megavirus	2.4e-19	24.1
WP_105241958.1\|3386368_3388741_-	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA
WP_075329953.1\|3388778_3389522_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	1.8e-12	26.6
WP_001121440.1\|3389607_3390639_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_032336133.1\|3390644_3391619_-	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_120795387.1\|3391824_3391947_+	protein YneP	NA	NA	NA	NA
WP_001254932.1\|3395358_3396510_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000631725.1\|3398001_3398349_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_004967157.1\|3398345_3399020_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_105241959.1\|3399636_3400830_-\|transposase	IS4 family transposase	S5FM71	Shigella_phage	1.2e-138	62.5
WP_000060459.1\|3401721_3402483_-	acid stress response transcriptional regulator YdeO	NA	NA	NA	NA
WP_000543393.1\|3402557_3402755_-	two-component system connector SafA	NA	NA	NA	NA
WP_000726669.1\|3403002_3405282_-	acid resistance putative oxidoreductase YdeP	NA	NA	NA	NA
WP_000520692.1\|3405615_3406530_-	fimbrial protein	NA	NA	NA	NA
WP_088895425.1\|3407589_3408818_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_086021050.1\|3409735_3410579_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0

DBSCAN-SWA_20

3421873 : 3487721

Bacillus_phage(18.18%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086021050.1\|3421873_3422717_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_105241965.1\|3424470_3424653_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_000257415.1\|3425846_3426773_+	glutaminase B	NA	NA	NA	NA
WP_001182685.1\|3426772_3427132_+	DUF4186 domain-containing protein	NA	NA	NA	NA
WP_000971286.1\|3427187_3428312_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.1e-18	36.1
WP_000854619.1\|3428538_3429990_+	tagaturonate reductase	NA	NA	NA	NA
WP_005011143.1\|3430196_3431111_+	hypothetical protein	NA	NA	NA	NA
WP_024258939.1\|3431114_3431873_-	trans-aconitate 2-methyltransferase	NA	NA	NA	NA
WP_005010168.1\|3431882_3433229_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000558527.1\|3433367_3433658_-	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA
WP_000774177.1\|3433681_3434557_-	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_105241967.1\|3434583_3435606_-	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA
WP_000911174.1\|3436616_3437645_-	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
WP_001194853.1\|3437638_3439174_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	A0A2H4PQG7	Staphylococcus_phage	7.5e-21	30.4
WP_000154339.1\|3439422_3440376_+	transcriptional regulator LsrR	NA	NA	NA	NA
WP_105242100.1\|3443713_3444942_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001254932.1\|3447441_3448593_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001054189.1\|3449756_3450944_+	efflux MFS transporter YdeE	NA	NA	NA	NA
WP_000901367.1\|3451070_3451166_+	protein MgtS	NA	NA	NA	NA
WP_000592826.1\|3451384_3452275_-	diguanylate cyclase DgcZ	A0A127AWB9	Bacillus_phage	1.1e-19	37.7
WP_000671986.1\|3452529_3452922_-	YdeI family stress tolerance OB fold protein	NA	NA	NA	NA
WP_001024563.1\|3453197_3453716_+	2-oxo-tetronate isomerase	NA	NA	NA	NA
WP_004998897.1\|3453760_3455806_-	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
WP_000636574.1\|3455942_3456689_+	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_000215549.1\|3456777_3457464_+	DNA-binding transcriptional regulator YdfH	NA	NA	NA	NA
WP_000214712.1\|3457640_3457844_+	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
WP_000527808.1\|3457879_3459340_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.5e-42	29.6
WP_000598292.1\|3460126_3460453_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_000705197.1\|3460587_3460929_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138577.1\|3460963_3461524_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_075329984.1\|3461526_3462237_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001295396.1\|3462344_3462650_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_000041529.1\|3462848_3463079_+	dimethylsulfoxide reductase	NA	NA	NA	NA
WP_105241968.1\|3463079_3465275_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	6.1e-202	50.1
WP_000526463.1\|3468387_3469242_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000148710.1\|3469284_3469899_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_072038334.1\|3470056_3471349_+	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
WP_000919231.1\|3471301_3471997_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_000225276.1\|3472121_3473342_-	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_001019535.1\|3473476_3474367_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000091854.1\|3474473_3475727_+	MFS transporter	NA	NA	NA	NA
WP_000743943.1\|3476123_3476459_+	acid shock protein	NA	NA	NA	NA
WP_000233090.1\|3476551_3476635_+	hypothetical protein	NA	NA	NA	NA
WP_001260857.1\|3476734_3477556_+\|protease	serine protease	NA	NA	NA	NA
WP_000046661.1\|3477594_3477924_-	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_000276153.1\|3477910_3478276_-	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_001118229.1\|3478687_3479722_+	AI-2 transporter TqsA	NA	NA	NA	NA
WP_000014036.1\|3479746_3481135_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_004992068.1\|3481145_3482678_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_000769313.1\|3483201_3484146_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000412388.1\|3484331_3485714_+	amino acid permease	NA	NA	NA	NA
WP_000520803.1\|3485750_3486473_+	dihydromonapterin reductase	NA	NA	NA	NA
WP_001121440.1\|3486689_3487721_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

3514480 : 3629171

Edwardsiella_phage(12.82%)

tRNA,transposase,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000483770.1\|3514480_3515827_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000206363.1\|3515890_3516619_-	phenylacetic acid degradation protein PaaE	NA	NA	NA	NA
WP_001189195.1\|3516626_3517112_-	phenylacetate degradation protein PaaD	NA	NA	NA	NA
WP_086021050.1\|3517797_3518641_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000073393.1\|3518799_3519087_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_001070956.1\|3519098_3520028_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_001186461.1\|3520312_3522358_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_105241972.1\|3522724_3524848_+	primary-amine oxidase	NA	NA	NA	NA
WP_105241973.1\|3524906_3526406_-	phenylacetaldehyde dehydrogenase	NA	NA	NA	NA
WP_001067519.1\|3526641_3527547_+	transcriptional regulator FeaR	NA	NA	NA	NA
WP_024258484.1\|3527718_3528048_-	DUF1318 domain-containing protein	NA	NA	NA	NA
WP_000698145.1\|3528052_3528238_-	YnbE family lipoprotein	NA	NA	NA	NA
WP_000900950.1\|3528234_3530874_-	YdbH family protein	NA	NA	NA	NA
WP_000762229.1\|3531081_3532071_+	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
WP_001298828.1\|3532181_3532604_+	heat shock protein HslJ	NA	NA	NA	NA
WP_004992098.1\|3532600_3532867_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_000628204.1\|3533140_3536665_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_000837903.1\|3537030_3538164_+	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
WP_005011161.1\|3538304_3538739_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	5.2e-28	52.1
WP_000555620.1\|3539314_3540229_+	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_105241974.1\|3540228_3541056_+	iron/manganese ABC transporter ATP-binding protein SitB	G9BWD6	Planktothrix_phage	4.9e-11	28.5
WP_001101728.1\|3541052_3541910_+	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000968134.1\|3541906_3542764_+	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_105241975.1\|3542964_3543588_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	1.6e-83	79.1
WP_105241976.1\|3543538_3544807_-\|tail	prophage tail fiber N-terminal domain-containing protein	Q8W611	Enterobacteria_phage	1.6e-77	43.1
WP_000902876.1\|3544830_3545376_-\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	2.5e-72	73.1
WP_164834444.1\|3545378_3545903_-\|tail	phage tail protein	Q7Y4D4	Escherichia_virus	9.6e-45	54.5
WP_000140459.1\|3546844_3548041_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001181759.1\|3548216_3548822_-	DUF2612 domain-containing protein	H9C0Y0	Aeromonas_phage	6.5e-29	43.2
WP_005011144.1\|3548823_3549606_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	6.4e-53	43.6
WP_105241977.1\|3549608_3550061_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.2e-35	63.8
WP_001191864.1\|3550057_3550414_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	9.5e-20	49.1
WP_000068498.1\|3550426_3551104_-	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.6e-29	34.6
WP_000122177.1\|3551084_3551954_-	hypothetical protein	NA	NA	NA	NA
WP_105241978.1\|3553500_3554568_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.0e-37	35.5
WP_086021050.1\|3554564_3555409_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_001139094.1\|3557808_3558354_-	hypothetical protein	NA	NA	NA	NA
WP_001009073.1\|3558338_3558704_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	3.0e-21	39.7
WP_000247611.1\|3558700_3559285_-	hypothetical protein	A0A2I7QJD5	Vibrio_phage	2.3e-15	32.0
WP_105241979.1\|3559274_3559733_-	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	1.3e-16	43.5
WP_105241980.1\|3559738_3560086_-	hypothetical protein	H9C0V9	Aeromonas_phage	3.9e-10	41.2
WP_105241981.1\|3560089_3561118_-	DUF2184 domain-containing protein	Q8HAP7	Burkholderia_phage	8.1e-80	49.8
WP_001091400.1\|3561117_3561600_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	2.7e-25	42.3
WP_105241982.1\|3562958_3563648_-\|capsid	minor capsid protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
WP_105241983.1\|3563688_3565230_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	3.2e-104	44.2
WP_088895425.1\|3567047_3568275_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001254932.1\|3568800_3569952_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_105242100.1\|3570716_3571945_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_105241984.1\|3571982_3573014_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_171764795.1\|3573414_3574053_+	hypothetical protein	I6PDJ3	Cronobacter_phage	1.4e-13	47.6
WP_000788996.1\|3574059_3574806_+	ATP-binding protein	V5UQI5	Shigella_phage	2.1e-122	89.2
WP_001254932.1\|3575845_3576997_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001254932.1\|3578249_3579401_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_141095324.1\|3579722_3579812_-\|transposase	transposase	Q716C1	Shigella_phage	2.5e-06	93.1
WP_005010759.1\|3580034_3581066_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001157399.1\|3581937_3582873_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	7.7e-146	98.4
WP_000123752.1\|3583001_3584375_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.7e-53	34.7
WP_000387388.1\|3584852_3585836_-	zinc transporter ZntB	NA	NA	NA	NA
WP_000628062.1\|3586090_3587323_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	2.0e-16	38.8
WP_001046829.1\|3587343_3587907_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_005032737.1\|3588309_3589149_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005010759.1\|3589596_3590628_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000945005.1\|3591959_3592475_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.4e-24	42.8
WP_000611911.1\|3592669_3593422_+	fumarate/nitrate reduction transcriptional regulator Fnr	NA	NA	NA	NA
WP_001262123.1\|3593573_3594524_+	universal stress protein UspE	NA	NA	NA	NA
WP_000605090.1\|3594573_3594831_-	DUF2534 family protein	NA	NA	NA	NA
WP_004998830.1\|3594992_3596339_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000559900.1\|3596512_3597544_+	low conductance mechanosensitive channel YnaI	NA	NA	NA	NA
WP_000683014.1\|3597594_3599208_-	murein tripeptide ABC transporter substrate-binding protein MppA	NA	NA	NA	NA
WP_000817686.1\|3599544_3600444_-	DNA-binding transcriptional regulator PgrR	NA	NA	NA	NA
WP_004998407.1\|3600581_3601502_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001344821.1\|3602470_3603109_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_105241988.1\|3604119_3605085_-	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA
WP_000084387.1\|3605203_3605710_+	thiol peroxidase	NA	NA	NA	NA
WP_005012845.1\|3605753_3607295_-	transcriptional regulator TyrR	NA	NA	NA	NA
WP_000138717.1\|3607442_3608504_-	TIGR01620 family protein	NA	NA	NA	NA
WP_000825796.1\|3608500_3609898_-	YcjX family protein	NA	NA	NA	NA
WP_000075371.1\|3610052_3611051_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000735247.1\|3611161_3612067_-	monomeric porin OmpG	NA	NA	NA	NA
WP_000057978.1\|3612111_3613194_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.6e-23	34.7
WP_000775797.1\|3613207_3613867_-	beta-phosphoglucomutase	NA	NA	NA	NA
WP_105241989.1\|3613863_3616131_-	kojibiose phosphorylase	NA	NA	NA	NA
WP_005012860.1\|3616127_3617183_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000690251.1\|3617192_3617981_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_000737346.1\|3617990_3619043_-	zinc-binding alcohol dehydrogenase	NA	NA	NA	NA
WP_000224673.1\|3619073_3619916_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_001080790.1\|3619902_3620784_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_000810483.1\|3620804_3623273_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_000473109.1\|3623484_3623799_-	thiosulfate sulfurtransferase PspE	NA	NA	NA	NA
WP_001295585.1\|3623873_3624095_-	phage shock protein PspD	NA	NA	NA	NA
WP_000907387.1\|3624103_3624463_-	envelope stress response membrane protein PspC	NA	NA	NA	NA
WP_001274956.1\|3624462_3624687_-	envelope stress response membrane protein PspB	NA	NA	NA	NA
WP_000511025.1\|3624740_3625409_-	phage shock protein PspA	NA	NA	NA	NA
WP_000852835.1\|3625575_3626553_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA
WP_000336104.1\|3626670_3627876_-	4-aminobutyrate transaminase	A0A1V0SKB7	Klosneuvirus	6.7e-25	26.5
WP_001143985.1\|3627977_3629171_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	7.6e-138	62.0

DBSCAN-SWA_22

3732550 : 3828352

Stx2-converting_phage(22.73%)

tRNA,transposase,integrase

attL 3811659:3811718|attR 3820970:3821076

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002432222.1\|3732550_3733807_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_001130704.1\|3734020_3734644_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_001260305.1\|3734643_3735495_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_001298109.1\|3735645_3736593_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	3.9e-44	37.8
WP_001033340.1\|3736717_3738397_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	3.9e-23	23.6
WP_000823885.1\|3738451_3738730_-	stress-induced protein YchH	NA	NA	NA	NA
WP_000152955.1\|3739007_3739592_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000505866.1\|3739708_3740800_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_004998308.1\|3741644_3744530_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_000733749.1\|3746776_3747847_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_000059411.1\|3747857_3748490_+	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_004970697.1\|3748500_3749919_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_005010759.1\|3750186_3751218_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000841711.1\|3751393_3753091_+	alpha,alpha-trehalase	NA	NA	NA	NA
WP_000615059.1\|3753169_3753610_-	hypothetical protein	NA	NA	NA	NA
WP_000511315.1\|3753788_3754043_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_000020158.1\|3754243_3754978_+	flagellar brake protein	NA	NA	NA	NA
WP_001295616.1\|3754979_3755591_-	membrane-bound lytic murein transglycosylase EmtA	NA	NA	NA	NA
WP_105241994.1\|3755690_3756605_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
WP_000340206.1\|3756699_3758436_+	potassium/proton antiporter	NA	NA	NA	NA
WP_000197840.1\|3758820_3759891_-	catabolic alanine racemase DadX	NA	NA	NA	NA
WP_005013845.1\|3759900_3761205_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_000190855.1\|3761573_3763106_+	SpoVR family protein	NA	NA	NA	NA
WP_000234823.1\|3763157_3763877_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA
WP_000943459.1\|3765784_3766315_+	disulfide bond formation protein DsbB	NA	NA	NA	NA
WP_000457622.1\|3766360_3767629_-	DNA polymerase V catalytic protein	I6RSM4	Salmonella_phage	1.0e-209	83.4
WP_000897378.1\|3767628_3768048_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.9e-38	62.1
WP_088895425.1\|3768488_3769716_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001121440.1\|3769886_3770918_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000807626.1\|3772029_3772491_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_000284277.1\|3772567_3773227_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_004970758.1\|3773298_3773592_-	YcgL domain-containing protein	NA	NA	NA	NA
WP_000695221.1\|3773832_3774225_+	pre-peptidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_086021050.1\|3774262_3775106_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_001056840.1\|3775254_3775623_-	YcgJ family protein	NA	NA	NA	NA
WP_001295613.1\|3776142_3776838_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_000101055.1\|3776861_3777674_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_001185665.1\|3777677_3777944_+	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_001131446.1\|3781675_3781795_-	hypothetical protein	NA	NA	NA	NA
WP_001325743.1\|3781755_3781941_-	hypothetical protein	NA	NA	NA	NA
WP_000122462.1\|3782041_3782215_+	hypothetical protein	NA	NA	NA	NA
WP_005033203.1\|3782276_3782561_+	hypothetical protein	NA	NA	NA	NA
WP_000979975.1\|3782564_3782900_+	YmgD family protein	NA	NA	NA	NA
WP_001299921.1\|3786028_3786247_-	hypothetical protein	NA	NA	NA	NA
WP_001246475.1\|3786378_3787902_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_001065751.1\|3788234_3788483_-	hypothetical protein	NA	NA	NA	NA
WP_000888776.1\|3788595_3788862_-	biofilm/acid-resistance regulator AriR	NA	NA	NA	NA
WP_000858000.1\|3788890_3789163_-	hypothetical protein	NA	NA	NA	NA
WP_000554146.1\|3789205_3789442_-	two-component-system connector protein YcgZ	NA	NA	NA	NA
WP_001254932.1\|3790459_3791611_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_005013746.1\|3793290_3794637_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000332300.1\|3795104_3795836_+	DNA-binding transcriptional repressor BluR	Q9EYF2	Enterobacteria_phage	3.5e-53	50.5
WP_105241997.1\|3796361_3797393_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_105241998.1\|3797476_3797803_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001072337.1\|3797799_3798054_-	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
WP_000233320.1\|3798133_3798553_+	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
WP_001088287.1\|3799768_3800443_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_000631709.1\|3800439_3800787_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
WP_005002356.1\|3800806_3802408_+\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-147	61.2
WP_000631725.1\|3803167_3803515_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_004967157.1\|3803511_3804186_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_000379578.1\|3804330_3804486_+	DUF1391 family protein	M4QQ57	Salicola_phage	2.3e-07	53.2
WP_001171942.1\|3804645_3804864_+	hypothetical protein	NA	NA	NA	NA
WP_000854564.1\|3805432_3805621_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001070255.1\|3805617_3805809_+	DUF1482 family protein	NA	NA	NA	NA
WP_105241999.1\|3805902_3808344_+	exonuclease	V5UQJ3	Shigella_phage	2.5e-111	46.5
WP_086021050.1\|3808449_3809294_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_105242000.1\|3809335_3809524_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533619.1\|3809523_3810549_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
WP_005014722.1\|3810784_3811582_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
3811659:3811718	attL	NA	NA	NA	NA
WP_000055682.1\|3811919_3813182_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	7.9e-69	38.1
WP_000957853.1\|3813689_3813878_+	hypothetical protein	NA	NA	NA	NA
WP_000947192.1\|3813887_3815087_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000532914.1\|3815592_3816309_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_141095325.1\|3816939_3818580_-	toxic metabolite efflux MATE transporter YeeO	NA	NA	NA	NA
WP_094319814.1\|3818697_3819648_-	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_001011483.1\|3819749_3820667_-	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_000986347.1\|3821125_3822061_-	L,D-transpeptidase	NA	NA	NA	NA
3820970:3821076	attR	NA	NA	NA	NA
WP_001166155.1\|3822122_3823202_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_105242102.1\|3823213_3823957_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_105242002.1\|3823989_3824499_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_153643809.1\|3825538_3826766_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_001373172.1\|3827200_3828352_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	36.4

DBSCAN-SWA_23

3909689 : 4035000

Escherichia_phage(30.0%)

tRNA,transposase,plate,lysis,portal,capsid,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_170317395.1\|3909689_3911630_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005010663.1\|3911765_3912530_+	metallopeptidase YcaL	NA	NA	NA	NA
WP_000125016.1\|3912702_3913386_+	(d)CMP kinase	NA	NA	NA	NA
WP_000140327.1\|3913496_3915170_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_000167336.1\|3915329_3915614_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_004967157.1\|3917529_3918204_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_000631725.1\|3918200_3918548_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_000551266.1\|3920553_3922302_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	3.3e-57	29.8
WP_000570569.1\|3922298_3923285_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000056524.1\|3923321_3924554_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000350058.1\|3924605_3924788_+	protein YcaR	NA	NA	NA	NA
WP_000011602.1\|3924784_3925531_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000436921.1\|3925684_3926578_+	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000899610.1\|3926554_3927334_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_005010831.1\|3927469_3928255_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288854.1\|3928251_3929574_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_001295931.1\|3929554_3930259_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572675.1\|3930258_3934719_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_171765188.1\|3934863_3936210_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000288361.1\|3939346_3940204_-	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA
WP_000469692.1\|3940337_3941690_+	molecular chaperone	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.6e-06	20.9
WP_105242010.1\|3941702_3943649_-	protein kinase YegI	NA	NA	NA	NA
WP_000722348.1\|3943846_3944308_+	YegJ family protein	NA	NA	NA	NA
WP_000119108.1\|3944372_3945134_-	protein-serine/threonine phosphatase PphC	NA	NA	NA	NA
WP_105242011.1\|3945403_3946603_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957853.1\|3946612_3946801_-	hypothetical protein	NA	NA	NA	NA
WP_000678952.1\|3948056_3949304_+	multidrug efflux RND transporter subunit MdtA	NA	NA	NA	NA
WP_001197872.1\|3949303_3952426_+	multidrug efflux RND transporter permease subunit MdtB	NA	NA	NA	NA
WP_105242012.1\|3952426_3955504_+	multidrug efflux RND transporter permease subunit MdtC	NA	NA	NA	NA
WP_000130875.1\|3955504_3956920_+	MFS transporter	NA	NA	NA	NA
WP_000675144.1\|3956916_3958320_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.2e-33	29.4
WP_000137873.1\|3958316_3959039_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.9e-30	33.2
WP_005000001.1\|3959184_3959517_+	YegP family protein	NA	NA	NA	NA
WP_000476014.1\|3959664_3961026_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.9e-217	99.7
WP_000468308.1\|3961298_3961517_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000882962.1\|3961598_3962762_-	phage late control D family protein	Q7Y4C6	Escherichia_virus	1.7e-203	97.4
WP_000978904.1\|3962761_3963241_-\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	2.1e-83	98.1
WP_105242013.1\|3963255_3965637_-\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	0.0e+00	95.5
WP_000785970.1\|3965694_3965814_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031303.1\|3965846_3966122_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_001286721.1\|3966708_3967899_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.4e-224	99.5
WP_001121440.1\|3968296_3969328_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000747051.1\|3970068_3970419_+\|transposase	transposase	Q716C1	Shigella_phage	1.8e-39	98.9
WP_001254932.1\|3970338_3971490_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_004999989.1\|3972808_3973594_-	hypothetical protein	NA	NA	NA	NA
WP_001143970.1\|3973946_3975140_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	2.6e-138	62.2
WP_088895413.1\|3976027_3977256_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	8.5e-177	99.0
WP_001164153.1\|3977837_3978365_-\|tail	tail fiber assembly protein	U5N0T1	Enterobacteria_phage	3.2e-88	92.6
WP_105242014.1\|3978368_3980474_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	5.8e-141	57.5
WP_001285331.1\|3980484_3981015_-\|tail	phage tail protein I	U5N0U8	Enterobacteria_phage	1.5e-101	99.4
WP_001121457.1\|3981007_3981916_-\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	1.7e-161	99.3
WP_000127163.1\|3981920_3982268_-	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_105242103.1\|3982264_3982894_-\|plate	phage baseplate assembly protein V	A0A0F7LDY9	Escherichia_phage	9.6e-108	96.1
WP_105242015.1\|3984155_3984608_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	4.5e-75	98.0
WP_000917156.1\|3984600_3985068_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
WP_072133976.1\|3985030_3985204_-\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	1.2e-23	93.0
WP_004999963.1\|3985175_3985601_-\|lysis	LysB family phage lysis regulatory protein	A0A0F7L9Y0	Escherichia_phage	4.4e-64	94.3
WP_000736561.1\|3985588_3986014_-	hypothetical protein	U5N096	Enterobacteria_phage	3.6e-58	96.4
WP_001144091.1\|3986028_3986526_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	1.5e-92	99.4
WP_000123123.1\|3986525_3986807_-\|holin	holin	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_094192352.1\|3987107_3988145_-\|capsid	phage major capsid protein, P2 family	Q94MI3	Enterobacteria_phage	1.1e-193	99.1
WP_105242016.1\|3988192_3989521_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_105242017.1\|3989677_3990532_-\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	2.2e-139	89.8
WP_105242019.1\|3992476_3993511_+\|portal	phage portal protein	Q858W8	Yersinia_virus	2.3e-199	98.5
WP_001121440.1\|3994109_3995141_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_001295425.1\|3995655_3995973_-	hypothetical protein	NA	NA	NA	NA
WP_000807346.1\|3996378_3997278_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	9.8e-13	29.0
WP_000178554.1\|3997359_3998139_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000490687.1\|3999326_4000682_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_000823272.1\|4000685_4000970_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000182904.1\|4001000_4001453_-	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000289790.1\|4002752_4003607_-	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_000129581.1\|4003837_4004890_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_000858527.1\|4005146_4006424_+	MFS transporter	NA	NA	NA	NA
WP_000846239.1\|4006420_4007425_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	1.9e-12	29.0
WP_000011966.1\|4007421_4008387_+	sugar kinase	NA	NA	NA	NA
WP_000434038.1\|4008360_4009107_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_004979327.1\|4009158_4009977_-	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	7.2e-23	36.7
WP_000822298.1\|4010041_4010842_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_001195643.1\|4010838_4011627_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000019942.1\|4011849_4012122_-	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_105242020.1\|4012241_4013120_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000153067.1\|4013341_4013680_+	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_105242021.1\|4013761_4014796_-	putative fimbrial-like adhesin protein	NA	NA	NA	NA
WP_105242022.1\|4014811_4017292_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000677390.1\|4017307_4017982_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000830468.1\|4018062_4018605_-	fimbrial protein	NA	NA	NA	NA
WP_001324851.1\|4018897_4019179_-	YehE family protein	NA	NA	NA	NA
WP_001005448.1\|4019440_4020550_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_004999891.1\|4020681_4022715_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.8
WP_000483770.1\|4028049_4029396_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_001254932.1\|4031081_4032233_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000957853.1\|4033602_4033791_+	hypothetical protein	NA	NA	NA	NA
WP_105242011.1\|4033800_4035000_+\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

4039951 : 4088348

Escherichia_phage(42.86%)

tRNA,transposase,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000937487.1\|4039951_4040221_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.6e-19	81.7
WP_000239881.1\|4040277_4040946_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_105242024.1\|4041261_4042905_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_001039888.1\|4042905_4043085_-	hypothetical protein	NA	NA	NA	NA
WP_000551128.1\|4043084_4043708_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	1.2e-78	75.9
WP_105242025.1\|4045633_4047760_-\|tail	prophage tail fiber N-terminal domain-containing protein	Q7Y4D4	Escherichia_virus	1.1e-171	64.9
WP_001233125.1\|4047824_4048424_-	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	2.0e-107	96.0
WP_004994989.1\|4049395_4050742_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_105242026.1\|4050805_4051390_-	host specificity protein	K7PKJ2	Enterobacteria_phage	4.1e-97	91.2
WP_000140459.1\|4051625_4052822_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000957853.1\|4055652_4055841_+	hypothetical protein	NA	NA	NA	NA
WP_000947192.1\|4055850_4057050_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000701814.1\|4058230_4058455_+	hypothetical protein	A0A1B5FPG2	Escherichia_phage	7.5e-31	95.9
WP_000034869.1\|4058555_4059185_+	hypothetical protein	A0A1B5FPC7	Escherichia_phage	9.6e-108	92.8
WP_000457742.1\|4059272_4059515_+	DUF4222 domain-containing protein	H6WZF9	Escherichia_phage	1.1e-35	95.0
WP_001030142.1\|4059518_4059665_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.7e-21	89.6
WP_001193441.1\|4059672_4059927_+	excisionase family protein	Q859D3	Escherichia_coli_phage	3.6e-37	86.9
WP_000072658.1\|4059960_4061247_+	DUF3596 domain-containing protein	H6WZF6	Escherichia_phage	2.8e-247	96.3
WP_032336184.1\|4061267_4061894_+	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.1e-82	85.2
WP_001216963.1\|4061953_4062061_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|4062041_4062773_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569361.1\|4062777_4063704_-	glycine betaine ABC transporter ATP binding protein YehX	G9BWD6	Planktothrix_phage	9.7e-24	34.6
WP_105242027.1\|4063696_4064854_-	glycine betaine ABC transporter permease YehY	NA	NA	NA	NA
WP_001131280.1\|4064860_4065778_-	glycine betaine ABC transporter substrate-binding protein OsmF	NA	NA	NA	NA
WP_000871456.1\|4066029_4068327_-	beta-glucosidase BglX	NA	NA	NA	NA
WP_001121440.1\|4068505_4069537_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_000097369.1\|4069677_4071393_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_001295432.1\|4071431_4072364_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_001295454.1\|4072537_4073125_-	YIP1 family protein	NA	NA	NA	NA
WP_000365433.1\|4073294_4073873_+	DedA family protein	NA	NA	NA	NA
WP_000079558.1\|4074002_4074764_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000691708.1\|4076475_4076559_+	protein YohP	NA	NA	NA	NA
WP_004977840.1\|4076946_4077894_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_001295452.1\|4078132_4078531_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_105242028.1\|4078527_4079223_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_000553557.1\|4079352_4080237_+	cytidine deaminase	NA	NA	NA	NA
WP_000920061.1\|4080386_4081106_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000354465.1\|4081108_4081348_+	DUF2542 family protein	NA	NA	NA	NA
WP_001136334.1\|4081666_4082905_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreT	NA	NA	NA	NA
WP_000956069.1\|4082898_4084134_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA
WP_001275099.1\|4084204_4085215_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_001254932.1\|4087196_4088348_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6

DBSCAN-SWA_25

4241929 : 4307666

Enterobacteria_phage(45.0%)

tRNA,transposase,integrase

attL 4232364:4232379|attR 4301035:4301050

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4232364:4232379	attL	NA	NA	NA	NA
WP_001121440.1\|4241929_4242961_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_005012347.1\|4242941_4243415_+	peptidase	NA	NA	NA	NA
WP_001244804.1\|4243485_4245213_-	VWA domain-containing protein	NA	NA	NA	NA
WP_105242040.1\|4245350_4246322_+	M28 family peptidase	NA	NA	NA	NA
WP_001121440.1\|4246501_4247533_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_048816310.1\|4247618_4248083_+	YfbM family protein	NA	NA	NA	NA
WP_000156701.1\|4248149_4249607_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_000926449.1\|4249613_4251143_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_001056777.1\|4251306_4253148_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_000612644.1\|4253144_4253447_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_000393511.1\|4253443_4253998_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_000172749.1\|4254009_4254552_-	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_000118507.1\|4254566_4255544_-	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_004977613.1\|4255540_4258267_-	NADH-quinone oxidoreductase subunit NuoG	NA	NA	NA	NA
WP_000789496.1\|4258319_4259657_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_000545042.1\|4259653_4260154_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_000247878.1\|4260156_4261959_-	NADH-quinone oxidoreductase subunit C/D	NA	NA	NA	NA
WP_000386733.1\|4262052_4262715_-	NADH-quinone oxidoreductase subunit NuoB	NA	NA	NA	NA
WP_000062997.1\|4262730_4263174_-	NADH-quinone oxidoreductase subunit NuoA	NA	NA	NA	NA
WP_000622286.1\|4263802_4264741_-	transcriptional regulator LrhA	NA	NA	NA	NA
WP_000074527.1\|4265655_4266873_+	alanine transaminase AlaA	NA	NA	NA	NA
WP_000813850.1\|4266956_4267556_+	5'-deoxynucleotidase	A0A2L0V156	Salmonella_phage	1.5e-06	38.6
WP_001012899.1\|4267614_4269447_-	SLC13 family permease	NA	NA	NA	NA
WP_000426124.1\|4270194_4270689_-	YfbU family protein	NA	NA	NA	NA
WP_000106627.1\|4270771_4271227_-	DUF412 domain-containing protein	NA	NA	NA	NA
WP_000095710.1\|4271564_4272767_+	acetate kinase	NA	NA	NA	NA
WP_001254932.1\|4273354_4274506_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001274492.1\|4276398_4277919_+	putative basic amino acid antiporter YfcC	NA	NA	NA	NA
WP_000437935.1\|4277951_4278494_-	NUDIX hydrolase YfcD	NA	NA	NA	NA
WP_000772452.1\|4278551_4279103_-	phosphodiesterase	NA	NA	NA	NA
WP_000566471.1\|4279938_4280586_+	GSH-dependent disulfide bond oxidoreductase	NA	NA	NA	NA
WP_000068457.1\|4280642_4281005_+	dihydroneopterin triphosphate 2'-epimerase	NA	NA	NA	NA
WP_001028336.1\|4281025_4281919_+	TIGR01777 family protein	NA	NA	NA	NA
WP_005010759.1\|4282282_4283314_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001293612.1\|4284208_4284982_-	histidine ABC transporter ATP-binding protein HisP	G9BWD6	Planktothrix_phage	2.4e-23	38.1
WP_000569959.1\|4284989_4285706_-	ABC transporter permease	NA	NA	NA	NA
WP_000965518.1\|4285702_4286389_-	histidine ABC transporter permease HisQ	NA	NA	NA	NA
WP_000737621.1\|4286478_4287261_-	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA
WP_000748271.1\|4287481_4288264_-	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA
WP_000825707.1\|4288529_4289099_-	flavin prenyltransferase UbiX	NA	NA	NA	NA
WP_000334221.1\|4289193_4290711_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.5e-87	44.0
WP_000262113.1\|4290747_4291236_-	colicin V production protein	NA	NA	NA	NA
WP_000157010.1\|4291494_4292157_-	cell division protein DedD	NA	NA	NA	NA
WP_000584572.1\|4292146_4293415_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_000118404.1\|4293484_4294399_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_000364335.1\|4294554_4295214_-	DedA family protein	NA	NA	NA	NA
WP_001283581.1\|4295296_4296109_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289171.1\|4296108_4297122_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_105242041.1\|4297187_4298345_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	2.1e-23	29.4
WP_105242042.1\|4298503_4299508_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	5.8e-99	55.7
WP_001088287.1\|4299627_4300302_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_000631725.1\|4300298_4300646_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_024258962.1\|4302304_4302643_-	helix-turn-helix transcriptional regulator	Q1JS37	Enterobacteria_phage	1.5e-14	43.2
4301035:4301050	attR	NA	NA	NA	NA
WP_105242043.1\|4302764_4303043_+	hypothetical protein	A0A0M4RCW1	Salmonella_phage	3.3e-20	53.1
WP_105242044.1\|4303049_4303256_+	hypothetical protein	NA	NA	NA	NA
WP_171765183.1\|4303361_4304589_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.5e-176	99.0
WP_000813369.1\|4304844_4305186_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	5.6e-54	90.5
WP_000158973.1\|4305196_4305484_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	2.3e-32	75.8
WP_000514277.1\|4305495_4305738_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000021652.1\|4305734_4305848_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	3.3e-11	97.3
WP_000985161.1\|4305934_4306138_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.9e-26	86.6
WP_000153676.1\|4306134_4306380_+	winged helix-turn-helix domain-containing protein	A0A0A7NV47	Enterobacteria_phage	6.7e-41	100.0
WP_001274220.1\|4306376_4306676_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.8e-41	90.8
WP_158250168.1\|4306713_4307304_+	ash family protein	S5MQL6	Escherichia_phage	4.4e-06	57.7
WP_000599382.1\|4307300_4307666_+	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5

DBSCAN-SWA_26

4311569 : 4346868

Enterobacteria_phage(84.85%)

tRNA,head,plate,terminase,portal,capsid,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000631725.1\|4311569_4311917_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_004967157.1\|4311913_4312588_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_105242045.1\|4312731_4313064_+	stbA family protein	A0A0A7NPX4	Enterobacteria_phage	5.9e-48	100.0
WP_105242046.1\|4313042_4313714_+	stability/partitioning protein	A0A0A7NPX4	Enterobacteria_phage	1.8e-120	98.7
WP_000211256.1\|4313718_4314030_+	plasmid partitioning/stability family protein	A0A0A7NPT5	Enterobacteria_phage	5.0e-49	97.1
WP_001163785.1\|4314093_4314426_+	carboxylate--amine ligase	A0A0A7NV51	Enterobacteria_phage	2.5e-54	97.2
WP_001080499.1\|4314422_4314737_+	hypothetical protein	A0A0A7NRY2	Enterobacteria_phage	1.3e-49	94.2
WP_001167297.1\|4314739_4315231_+	hypothetical protein	G9L661	Escherichia_phage	7.5e-84	92.6
WP_000224225.1\|4315232_4315496_+	hypothetical protein	A0A2P0P958	Salmonella_phage	3.3e-30	71.3
WP_000206724.1\|4315506_4315767_+	hypothetical protein	A5LH60	Enterobacteria_phage	7.6e-35	82.1
WP_000087805.1\|4316257_4317301_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.4e-204	99.7
WP_000613792.1\|4317300_4319052_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	0.0e+00	95.9
WP_001262688.1\|4319206_4320043_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.5e-119	80.6
WP_001055108.1\|4320066_4321119_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.4e-191	96.9
WP_000632315.1\|4321164_4321965_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.6e-131	92.5
WP_000063107.1\|4322066_4322561_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.7e-88	97.6
WP_000864901.1\|4322560_4322761_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_005011921.1\|4322763_4323087_+\|holin	phage holin family protein	A0A0A7NRY9	Enterobacteria_phage	4.7e-50	98.1
WP_000072327.1\|4323083_4323476_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000780548.1\|4323472_4323880_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	5.5e-64	95.6
WP_000920589.1\|4324017_4324485_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	4.5e-86	99.4
WP_000356362.1\|4324477_4325113_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	6.9e-114	99.1
WP_077826354.1\|4325124_4325691_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.3e-100	97.9
WP_001067548.1\|4325708_4326038_+	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	2.2e-55	100.0
WP_000071739.1\|4326853_4327384_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
WP_105242047.1\|4327386_4329534_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	1.7e-111	97.7
WP_000631341.1\|4329530_4330433_+	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	1.9e-96	67.7
WP_000954202.1\|4331062_4331635_-	serine acetyltransferase	NA	NA	NA	NA
WP_000979955.1\|4331791_4332280_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.0e-85	100.0
WP_000853430.1\|4332292_4335100_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.6
WP_000333503.1\|4335086_4335242_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000651574.1\|4335250_4335625_-	hypothetical protein	A0A0A7NPZ0	Enterobacteria_phage	2.0e-36	72.4
WP_105242048.1\|4336191_4337376_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.8e-224	98.5
WP_000488107.1\|4338685_4338946_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078920.1\|4339137_4339278_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
WP_001173930.1\|4339539_4339872_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_000789402.1\|4339876_4340770_+	type VI secretion protein	NA	NA	NA	NA
WP_000615813.1\|4341037_4342033_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127739.1\|4342029_4343208_-	arabinose transporter	NA	NA	NA	NA
WP_000817183.1\|4343482_4344703_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683813.1\|4344861_4346868_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA

DBSCAN-SWA_27

4365810 : 4434318

Paenibacillus_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_105242051.1\|4365810_4366655_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005032998.1\|4367737_4368769_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_005000367.1\|4369203_4369416_+	hypothetical protein	NA	NA	NA	NA
WP_000776759.1\|4369597_4370353_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_105242052.1\|4370646_4371579_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	2.0e-165	99.0
WP_005011998.1\|4371823_4372759_-	DNA-binding transcriptional regulator DsdC	NA	NA	NA	NA
WP_000556037.1\|4372976_4374314_+	D-serine transporter DsdX	NA	NA	NA	NA
WP_000426404.1\|4374331_4375660_+	D-serine ammonia-lyase	NA	NA	NA	NA
WP_001018709.1\|4375767_4377306_-	multidrug efflux MFS transporter permease subunit EmrY	NA	NA	NA	NA
WP_000435189.1\|4377305_4378469_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrK	NA	NA	NA	NA
WP_000991370.1\|4378884_4379499_+	acid-sensing system DNA-binding response regulator EvgA	NA	NA	NA	NA
WP_032333824.1\|4379503_4383097_+	acid-sensing system histidine kinase EvgS	A0A1V0SGX0	Hokovirus	3.9e-36	31.8
WP_005010759.1\|4383610_4384642_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000955028.1\|4385526_4386471_-	transporter YfdV	NA	NA	NA	NA
WP_105242053.1\|4386540_4388235_-	oxalyl-CoA decarboxylase	E5ERI2	Ostreococcus_lucimarinus_virus	4.7e-24	23.8
WP_000106757.1\|4388288_4389539_-	formyl-CoA transferase	NA	NA	NA	NA
WP_000825604.1\|4390051_4390684_-	YfdX family protein	NA	NA	NA	NA
WP_000867630.1\|4390979_4391255_+	colanic acid biosynthesis lipoprotein YpdI	NA	NA	NA	NA
WP_000639883.1\|4391331_4391574_-	YfdY family protein	NA	NA	NA	NA
WP_000484405.1\|4391926_4392847_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	6.4e-76	54.8
WP_010723117.1\|4393202_4393274_+	membrane protein YpdK	NA	NA	NA	NA
WP_000785944.1\|4393337_4394576_-	alanine transaminase	NA	NA	NA	NA
WP_105242054.1\|4394952_4396650_+	two-component system sensor histidine kinase YpdA	NA	NA	NA	NA
WP_086021050.1\|4396732_4397577_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005011915.1\|4397585_4398317_+	two-component system response regulator YpdB	A0A2R2ZGH8	Clostridioides_phage	7.4e-11	26.0
WP_000646827.1\|4398329_4399187_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_005011995.1\|4401283_4401460_-	aminopeptidase Y	NA	NA	NA	NA
WP_001143970.1\|4401555_4402749_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	2.6e-138	62.2
WP_000985364.1\|4404739_4405987_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_000038456.1\|4406008_4406335_-	fructose-like phosphotransferase enzyme IIB component 1	NA	NA	NA	NA
WP_000170342.1\|4406553_4407519_-	glucokinase	NA	NA	NA	NA
WP_000903160.1\|4407722_4408979_+	ion channel protein	NA	NA	NA	NA
WP_000490072.1\|4409093_4409420_+	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_004998488.1\|4409761_4410793_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000376337.1\|4413112_4414315_+	nucleoside permease NupC	NA	NA	NA	NA
WP_001121440.1\|4417163_4418195_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_086021023.1\|4418309_4419154_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_004993487.1\|4419260_4419605_+	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_164837509.1\|4419627_4419999_+	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000695653.1\|4420048_4421464_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_000201414.1\|4422117_4422459_+	FlxA-like family protein	NA	NA	NA	NA
WP_005000452.1\|4422487_4423384_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000765606.1\|4423473_4424472_+	bile acid:sodium symporter	NA	NA	NA	NA
WP_000410199.1\|4424468_4424687_-	DUF3820 family protein	NA	NA	NA	NA
WP_000443713.1\|4424688_4426704_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	3.8e-150	43.4
WP_001297862.1\|4426774_4427761_-	cell division protein ZipA	NA	NA	NA	NA
WP_000254840.1\|4427990_4428752_+	sulfate transporter CysZ	NA	NA	NA	NA
WP_000034402.1\|4428936_4429908_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	2.8e-74	51.0
WP_000487600.1\|4430291_4430549_+	phosphocarrier protein Hpr	NA	NA	NA	NA
WP_000623133.1\|4430593_4432321_+	phosphoenolpyruvate-protein phosphotransferase PtsI	A0A1V0SGR7	Hokovirus	6.2e-16	30.7
WP_105242055.1\|4432361_4432871_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_005036052.1\|4432971_4434318_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

4665316 : 4726621

Mycobacterium_phage(13.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004998488.1\|4665316_4666348_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_004998488.1\|4666840_4667872_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_005012014.1\|4668469_4669447_+	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_000069444.1\|4672244_4673525_+	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	1.1e-33	30.1
WP_001295173.1\|4673835_4675236_+	GABA permease	NA	NA	NA	NA
WP_000156807.1\|4675256_4675919_+	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA
WP_000522415.1\|4675919_4676369_-	potassium binding protein Kbp	A0A090DBR9	Clostridium_phage	2.0e-06	39.5
WP_005000967.1\|4676454_4677651_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001703586.1\|4677890_4678049_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_000137280.1\|4678231_4678531_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001229460.1\|4678540_4679065_+	thiosulfate sulfurtransferase YgaP	NA	NA	NA	NA
WP_000115373.1\|4679111_4679516_-	DNA-binding protein StpA	NA	NA	NA	NA
WP_000492656.1\|4680151_4680601_+	L-alanine exporter AlaE	NA	NA	NA	NA
WP_094110432.1\|4680836_4681680_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.7e-22	49.1
WP_005000959.1\|4682051_4682381_+	DUF883 domain-containing protein	NA	NA	NA	NA
WP_001223237.1\|4682628_4682874_+	glutaredoxin-like protein NrdH	NA	NA	NA	NA
WP_105242066.1\|4682870_4683281_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	6.0e-18	44.4
WP_000246538.1\|4683253_4685398_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.4e-195	48.3
WP_000777987.1\|4685407_4686367_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	4.5e-133	71.8
WP_105242067.1\|4686722_4687913_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	4.9e-28	39.4
WP_000774974.1\|4687916_4688981_+	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_001216536.1\|4689037_4690030_+	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_000165710.1\|4690221_4691406_+	MFS transporter	NA	NA	NA	NA
WP_000445654.1\|4691529_4692267_+	L-valine exporter subunit YgaZ	NA	NA	NA	NA
WP_000119748.1\|4692256_4692592_+	L-valine transporter subunit YgaH	NA	NA	NA	NA
WP_160536923.1\|4692610_4692712_-	hypothetical protein	NA	NA	NA	NA
WP_000378442.1\|4692682_4693213_+	multidrug efflux transporter EmrAB transcriptional repressor EmrR	NA	NA	NA	NA
WP_024258198.1\|4693337_4694510_+	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
WP_005000947.1\|4694526_4696065_+	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_001130211.1\|4696128_4696644_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000611799.1\|4696793_4698350_-	glutamate--cysteine ligase	NA	NA	NA	NA
WP_001287454.1\|4698422_4698851_-	DedA family protein	NA	NA	NA	NA
WP_000273292.1\|4698847_4699414_-	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_000906486.1\|4700463_4700649_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_000047198.1\|4700883_4703514_-\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	5.5e-80	38.6
WP_000140502.1\|4703641_4704142_-	recombination regulator RecX	NA	NA	NA	NA
WP_000963143.1\|4704369_4705431_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	1.2e-113	63.4
WP_005000932.1\|4705510_4706008_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	7.5e-31	49.7
WP_000476837.1\|4706152_4707238_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_000573321.1\|4707492_4708056_+	PTS glucitol/sorbitol transporter subunit IIC	NA	NA	NA	NA
WP_000148863.1\|4708052_4709012_+	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA
WP_000216215.1\|4709022_4709394_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_001077351.1\|4709397_4710177_+	sorbitol-6-phosphate dehydrogenase	NA	NA	NA	NA
WP_000252904.1\|4710282_4710642_+	transcriptional regulator GutM	NA	NA	NA	NA
WP_000804550.1\|4710708_4711482_+	glucitol operon DNA-binding transcriptional repressor SrlR	NA	NA	NA	NA
WP_001287438.1\|4711474_4712440_+	arabinose-5-phosphate isomerase GutQ	A0A2P0VNK5	Tetraselmis_virus	6.1e-37	33.9
WP_000010745.1\|4712436_4713951_-	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA
WP_088895425.1\|4715404_4716632_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000064737.1\|4718220_4719354_+	NADH:flavorubredoxin reductase NorW	NA	NA	NA	NA
WP_024258199.1\|4719481_4721734_-	carbamoyltransferase HypF	NA	NA	NA	NA
WP_001078773.1\|4721886_4722414_-	electron transport protein HydN	NA	NA	NA	NA
WP_005012051.1\|4722562_4723573_-	DNA-binding transcriptional regulator AscG	C6ZCU4	Enterobacteria_phage	1.2e-27	28.4
WP_001254932.1\|4725469_4726621_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6

DBSCAN-SWA_29

4747044 : 4871243

Vibrio_phage(23.68%)

tRNA,tail,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086021023.1\|4747044_4747889_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_004993790.1\|4748103_4749474_-	adenylosuccinate lyase family protein	NA	NA	NA	NA
WP_005010759.1\|4750823_4751855_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000847991.1\|4751938_4752475_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	4.4e-53	68.5
WP_005000866.1\|4752670_4753438_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.8e-69	56.3
WP_001139309.1\|4753488_4754145_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	1.8e-48	46.7
WP_001272912.1\|4754250_4756812_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.9e-29	20.4
WP_024258410.1\|4757055_4757838_-	hypothetical protein	NA	NA	NA	NA
WP_001121440.1\|4758055_4759087_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_105242070.1\|4759286_4760057_+	putative selenium-dependent hydroxylase accessory protein YqeC	NA	NA	NA	NA
WP_001020377.1\|4760104_4761730_+	EF2563 family selenium-dependent molybdenum hydroxylase system protein	NA	NA	NA	NA
WP_000037992.1\|4761770_4762703_-	carbamate kinase	NA	NA	NA	NA
WP_001264452.1\|4762750_4764136_-	dihydropyrimidinase	NA	NA	NA	NA
WP_001107117.1\|4764188_4765400_-	YgeY family selenium metabolism-linked hydrolase	NA	NA	NA	NA
WP_000110493.1\|4765457_4766654_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000978544.1\|4766711_4767902_-	knotted carbamoyltransferase YgeW	NA	NA	NA	NA
WP_000417817.1\|4768377_4770156_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA
WP_001016602.1\|4770195_4770675_-	xanthine dehydrogenase iron sulfur-binding subunit XdhC	NA	NA	NA	NA
WP_000459171.1\|4770671_4771550_-	xanthine dehydrogenase FAD-binding subunit XdhB	NA	NA	NA	NA
WP_000388142.1\|4771560_4773858_-	xanthine dehydrogenase molybdenum-binding subunit XdhA	NA	NA	NA	NA
WP_001272558.1\|4774272_4775028_+	peptidoglycan DD-metalloendopeptidase family protein	I2E8W3	Clostridium_phage	1.1e-12	36.8
WP_105242071.1\|4775978_4777141_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
WP_001389254.1\|4777187_4777757_-	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|4780030_4781182_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000656006.1\|4782190_4783372_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_000383234.1\|4783657_4784494_+	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA
WP_000603506.1\|4784523_4785285_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	Q06VL0	Trichoplusia_ni_ascovirus	4.5e-19	31.7
WP_000256438.1\|4785569_4786988_+	arabinose-proton symporter AraE	O13311	Aichi_virus	1.8e-24	26.9
WP_000848640.1\|4787116_4787809_+	amino acid racemase	NA	NA	NA	NA
WP_000741828.1\|4787795_4788731_-	DNA-binding transcriptional regulator LysR	NA	NA	NA	NA
WP_001120738.1\|4788852_4790115_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_000201037.1\|4790121_4791153_-	HTH-type transcriptional regulator GalR	NA	NA	NA	NA
WP_000899069.1\|4791738_4793898_+	bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase	NA	NA	NA	NA
WP_000004632.1\|4793890_4795084_+	lysophospholipid transporter LplT	NA	NA	NA	NA
WP_001199296.1\|4795115_4796156_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
WP_000758655.1\|4796263_4796482_-	lipoprotein YgdR	NA	NA	NA	NA
WP_000895624.1\|4796619_4797333_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.6e-45	47.3
WP_000082185.1\|4797401_4798091_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA
WP_000564489.1\|4798775_4799306_+	RNA pyrophosphohydrolase	NA	NA	NA	NA
WP_000957911.1\|4799318_4801565_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	2.7e-11	26.2
WP_000204658.1\|4801715_4802591_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_000816232.1\|4802597_4803392_+	thymidylate synthase	A6M9A2	Geobacillus_virus	7.6e-118	70.8
WP_069934407.1\|4803576_4804047_+	prepilin peptidase-dependent protein	NA	NA	NA	NA
WP_001144322.1\|4804037_4804601_+	prepilin peptidase-dependent protein	NA	NA	NA	NA
WP_001078393.1\|4804597_4805005_+	DUF2509 family protein	NA	NA	NA	NA
WP_001276460.1\|4804989_4805313_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_000946879.1\|4805325_4808694_+	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
WP_001138155.1\|4808869_4811758_+	pitrilysin	A0A1V0SJA4	Klosneuvirus	4.0e-68	25.7
WP_005013367.1\|4811750_4815293_+	exodeoxyribonuclease V subunit beta	S5MMD7	Bacillus_phage	1.5e-11	22.6
WP_000775959.1\|4815292_4817119_+	exodeoxyribonuclease V subunit alpha	A0A1P8DII4	Virus_Rctr197k	7.8e-25	26.7
WP_000237957.1\|4817180_4818512_-	amino-acid N-acetyltransferase	NA	NA	NA	NA
WP_000016907.1\|4818743_4819997_+	N-acetylmuramoyl-L-alanine amidase AmiC	Q5YA51	Bacillus_phage	2.2e-15	28.6
WP_000106969.1\|4821557_4821986_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000484011.1\|4821989_4822526_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000342480.1\|4823548_4825309_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000217701.1\|4825548_4826016_-	hypothetical protein	NA	NA	NA	NA
WP_000177780.1\|4827223_4828147_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_005013338.1\|4828298_4831373_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_001202356.1\|4831429_4832047_-	hypothetical protein	NA	NA	NA	NA
WP_005010277.1\|4832150_4833497_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000514034.1\|4833600_4834296_-	hypothetical protein	A0A0C4UQZ7	Shigella_phage	2.4e-128	95.2
WP_038348398.1\|4834246_4834432_-	Com family DNA-binding transcriptional regulator	A0A0C4UQS3	Shigella_phage	2.9e-20	71.0
WP_001135846.1\|4835132_4836539_-\|tail	prophage tail fiber N-terminal domain-containing protein	Q8W611	Enterobacteria_phage	9.5e-39	44.2
WP_000423347.1\|4836525_4837056_-\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	8.4e-65	68.2
WP_004996298.1\|4837070_4837988_-	hypothetical protein	Q71TP5	Escherichia_phage	3.7e-44	44.9
WP_004996284.1\|4839253_4839376_-	hypothetical protein	NA	NA	NA	NA
WP_105242074.1\|4839477_4840452_-\|plate	baseplate J/gp47 family protein	A0A2I7S9E5	Vibrio_phage	3.8e-79	50.6
WP_000206060.1\|4840441_4840894_-	phage GP46 family protein	A0A2I7S9F0	Vibrio_phage	1.7e-21	42.1
WP_000523894.1\|4840890_4841427_-\|plate	phage baseplate assembly protein	M4MCP6	Vibrio_phage	1.6e-26	40.7
WP_000213600.1\|4842486_4843761_-	DNA circularization N-terminal domain-containing protein	A0A2I7S9E8	Vibrio_phage	1.3e-79	39.9
WP_000190544.1\|4843760_4845605_-	hypothetical protein	M4MHE6	Vibrio_phage	4.5e-89	43.1
WP_000729653.1\|4845691_4846087_-\|tail	phage tail assembly protein	A0A0C4UR03	Shigella_phage	1.2e-12	44.5
WP_001062747.1\|4846088_4846445_-\|tail	phage tail tube protein	A0A2P1A4D6	Alteromonadaceae_phage	2.3e-13	35.5
WP_000052047.1\|4846454_4847930_-\|tail	phage tail sheath subtilisin-like domain-containing protein	M1Q565	Vibrio_phage	6.0e-153	55.3
WP_000435846.1\|4847929_4848115_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_000139650.1\|4848095_4848707_-	hypothetical protein	M1PJ94	Vibrio_phage	5.6e-36	44.9
WP_000513059.1\|4848703_4849246_-	phage virion morphogenesis protein	A0A2I7S9D7	Vibrio_phage	8.7e-57	62.0
WP_000540585.1\|4849245_4849683_-	DUF1320 domain-containing protein	A0A2I7S9E9	Vibrio_phage	2.4e-33	49.0
WP_000763187.1\|4849682_4849907_-	hypothetical protein	NA	NA	NA	NA
WP_000631725.1\|4851598_4851946_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_004967157.1\|4851942_4852617_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_086021050.1\|4852913_4853758_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_005000753.1\|4853821_4854163_-	hypothetical protein	NA	NA	NA	NA
WP_001145238.1\|4854181_4854439_-	hypothetical protein	NA	NA	NA	NA
WP_105242075.1\|4854693_4855608_-	hypothetical protein	NA	NA	NA	NA
WP_000063937.1\|4855692_4856406_-	hypothetical protein	NA	NA	NA	NA
WP_000147335.1\|4858919_4861565_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.7e-97	30.8
WP_000997071.1\|4861755_4862247_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_039072487.1\|4862304_4863957_-	OmpA family protein	NA	NA	NA	NA
WP_000712309.1\|4863969_4864635_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_105242076.1\|4865975_4867514_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004968663.1\|4867572_4868073_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_000678644.1\|4869100_4870198_+	murein transglycosylase A	NA	NA	NA	NA
WP_000117739.1\|4870436_4871243_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	7.6e-17	33.9

DBSCAN-SWA_30

4913814 : 4981479

uncultured_Mediterranean_phage(15.38%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004998488.1\|4913814_4914846_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000039697.1\|4915018_4916497_-	sugar kinase	NA	NA	NA	NA
WP_001164540.1\|4916523_4917801_-	MFS transporter	NA	NA	NA	NA
WP_105242078.1\|4918119_4918905_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-20	32.1
WP_000059293.1\|4918974_4920429_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_000147674.1\|4920450_4921860_+	MFS transporter	NA	NA	NA	NA
WP_005010860.1\|4921837_4922617_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_001130266.1\|4923621_4924197_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_000109520.1\|4924213_4924474_-	ferredoxin family protein	NA	NA	NA	NA
WP_005000825.1\|4924464_4925736_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000108297.1\|4925813_4926176_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_000211953.1\|4926494_4928294_+	NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA	NA	NA	NA
WP_001290727.1\|4928293_4930006_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_000039835.1\|4930079_4930814_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA
WP_000956458.1\|4931078_4931231_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_000142534.1\|4931468_4934126_+	CRISPR-associated helicase/endonuclease Cas3	A0A2R2ZGW0	Clostridioides_phage	4.0e-06	24.1
WP_005000855.1\|4934223_4935786_+	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA
WP_000029321.1\|4935782_4936322_+	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA
WP_000206410.1\|4936333_4937389_+	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA
WP_000085076.1\|4937399_4938146_+	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA
WP_000281426.1\|4938127_4938778_+	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
WP_000144880.1\|4938774_4939695_+	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_000063176.1\|4939694_4939988_+	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA
WP_000490393.1\|4940439_4941477_-	alkaline phosphatase isozyme conversion aminopeptidase	NA	NA	NA	NA
WP_086021023.1\|4941612_4942457_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0
WP_000372390.1\|4942646_4943555_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_001090358.1\|4943556_4944984_+	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	9.7e-31	31.4
WP_001173674.1\|4944983_4945589_+	adenylyl-sulfate kinase	A0A2K9L4R9	Tupanvirus	7.2e-28	38.1
WP_001246104.1\|4945638_4945962_+	DUF3561 family protein	NA	NA	NA	NA
WP_000517474.1\|4946155_4946467_+	cell division protein FtsB	NA	NA	NA	NA
WP_000246143.1\|4946485_4947196_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_001254932.1\|4947730_4948882_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_000568963.1\|4948894_4949944_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_001295182.1\|4949924_4950686_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254709.1\|4950679_4951306_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	7.5e-36	49.7
WP_001272570.1\|4951445_4952585_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_001208073.1\|4953759_4954167_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000767718.1\|4954313_4954907_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_000863192.1\|4954906_4956334_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_000562982.1\|4956344_4956581_+	hypothetical protein	NA	NA	NA	NA
WP_000104422.1\|4956619_4957984_-	GntP family transporter	NA	NA	NA	NA
WP_001136925.1\|4958072_4958849_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|4958853_4959492_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590383.1\|4959488_4960751_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.3e-135	61.4
WP_001121440.1\|4961159_4962191_-\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA
WP_105242100.1\|4962383_4963611_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_005000674.1\|4964650_4966570_+	formate-dependent uric acid utilization protein YgfT	NA	NA	NA	NA
WP_000838431.1\|4966569_4967058_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_000012163.1\|4967093_4968461_-	guanine/hypoxanthine transporter GhxQ	A0A0R6PHV4	Moraxella_phage	2.1e-160	73.1
WP_001299798.1\|4968496_4969813_-	guanine deaminase	NA	NA	NA	NA
WP_105242079.1\|4969830_4971231_-	xanthine/proton symporter XanQ	NA	NA	NA	NA
WP_105242080.1\|4971395_4974266_-	molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit	NA	NA	NA	NA
WP_000572475.1\|4974262_4975042_-	molybdopterin-dependent oxidoreductase FAD-binding subunit	NA	NA	NA	NA
WP_105242081.1\|4975116_4976421_-	putative aminohydrolase SsnA	NA	NA	NA	NA
WP_105242082.1\|4976423_4979522_-	putative selenate reductase subunit YgfK	NA	NA	NA	NA
WP_042769825.1\|4979842_4980331_-	NTP transferase domain-containing protein	NA	NA	NA	NA
WP_001121440.1\|4980447_4981479_+\|transposase	IS630-like element IS630 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP027027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection