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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP024308 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP024310 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence 0 crisprs DEDDh,csa3 0 0 0 0
NZ_CP024307 Sinorhizobium fredii strain NXT3 chromosome, complete genome 2 crisprs WYL,cas3,csa3 0 0 3 0
NZ_CP024309 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP024307
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024307_1 1480772-1480936 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP024307_2 3212679-3212879 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1662583 : 1676824 14 uncultured_Mediterranean_phage(81.82%) tRNA NA
DBSCAN-SWA_2 1881023 : 1905775 27 Sinorhizobium_phage(57.14%) terminase,tail,head NA
DBSCAN-SWA_3 2295727 : 2309161 13 Sulfitobacter_phage(58.33%) tail,portal NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage