CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP014119	Staphylococcus epidermidis strain FDAARGOS_153 chromosome, complete genome	8 crisprs	csa3,WYL,cas6,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1,cas3,DEDDh,DinG	2	16	201
NZ_CP014117	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0	0
NZ_CP014120	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0
NZ_CP014118	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP014116	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014119_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_1

436426-436508

Orphan

Consensus_repeat	Method
ATCATAGATAGTTTTGCTTCTGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014119_1

>merge|NZ_CP014119|1|436426-436508|CRISPRCasFinder
ATCATAGATAGTTTTGCTTCTGTTTACATTTTTCAAAAATGCATAAGAGCCACTAACAATCATAGATTGTTTTGCTTCTGTTT

>NZ_CP014119|1|1|436426-436508|CRISPRCasFinder
ATCATAGATAGTTTTGCTTCTGTTT	ACATTTTTCAAAAATGCATAAGAGCCACTAACA
ATCATAGATTGTTTTGCTTCTGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_001831482.1\|438032_438398_-\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_CP014119.1\|WP_002438326.1\|441887_442544_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP014119.1\|WP_002456060.1\|436587_437868_-\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|183075
NZ_CP014119.1\|WP_001831592.1\|443616_444069_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|379056
NZ_CP014119.1\|WP_002456062.1\|435341_435764_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|226389
NZ_CP014119.1\|WP_002438333.1\|438521_439151_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_CP014119.1\|WP_002456059.1\|442572_443607_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP014119.1\|WP_002438321.1\|444088_444766_-\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_CP014119.1\|WP_002438356.1\|425430_425832_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP014119.1\|WP_002438338.1\|435954_436305_+\|DUF4889-domain-containing-protein	unknown	unknown	gnl\|CDD\|374445
NZ_CP014119.1\|WP_002438342.1\|433163_435269_+\|AraC-family-transcriptional-regulator-Rsp	unknown	unknown	gnl\|CDD\|197666
NZ_CP014119.1\|WP_002438330.1\|439314_439761_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP014119.1\|WP_002456063.1\|430024_431470_-\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_CP014119.1\|WP_002438328.1\|440467_441631_-\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP014119.1\|WP_002438357.1\|424374_425367_+\|acryloyl-CoA-reductase	unknown	unknown	gnl\|CDD\|176249
NZ_CP014119.1\|WP_001831504.1\|425900_426317_-\|DUF2871-domain-containing-protein	unknown	unknown	gnl\|CDD\|378551
NZ_CP014119.1\|WP_107508710.1\|426530_426830_-\|transporter	unknown	unknown	gnl\|CDD\|260082
NZ_CP014119.1\|WP_173020228.1\|444758_445349_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_CP014119.1\|WP_002438349.1\|428987_429935_+\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_CP014119.1\|WP_001831516.1\|431623_432001_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_001831482.1\|438032_438398_-\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	9.91056e-13
NZ_CP014119.1\|WP_002438326.1\|441887_442544_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.04431e-76
NZ_CP014119.1\|WP_002456060.1\|436587_437868_-\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	3.75555e-163
NZ_CP014119.1\|WP_001831592.1\|443616_444069_-\|GAF-domain-containing-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	2.00355e-05
NZ_CP014119.1\|WP_002456062.1\|435341_435764_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	6.16351e-40
NZ_CP014119.1\|WP_002438333.1\|438521_439151_-\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	1.05694e-58
NZ_CP014119.1\|WP_002456059.1\|442572_443607_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.43496e-57
NZ_CP014119.1\|WP_002438321.1\|444088_444766_-\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	7.03174e-110
NZ_CP014119.1\|WP_002438356.1\|425430_425832_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.40673e-08
NZ_CP014119.1\|WP_002438338.1\|435954_436305_+\|DUF4889-domain-containing-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	6.96685e-27
NZ_CP014119.1\|WP_002438342.1\|433163_435269_+\|AraC-family-transcriptional-regulator-Rsp	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.26611e-18
NZ_CP014119.1\|WP_002438330.1\|439314_439761_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.29821e-18
NZ_CP014119.1\|WP_002456063.1\|430024_431470_-\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_CP014119.1\|WP_002438328.1\|440467_441631_-\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.11888e-109
NZ_CP014119.1\|WP_002438357.1\|424374_425367_+\|acryloyl-CoA-reductase	gnl\|CDD\|176249	cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP014119.1\|WP_001831504.1\|425900_426317_-\|DUF2871-domain-containing-protein	gnl\|CDD\|378551	pfam11070, DUF2871, Protein of unknown function (DUF2871). This family of proteins has no known function.	1.93795e-46
NZ_CP014119.1\|WP_107508710.1\|426530_426830_-\|transporter	gnl\|CDD\|260082	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.	6.46551e-11
NZ_CP014119.1\|WP_173020228.1\|444758_445349_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	6.86801e-51
NZ_CP014119.1\|WP_002438349.1\|428987_429935_+\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.20836e-108
NZ_CP014119.1\|WP_001831516.1\|431623_432001_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	1.02229e-28

>NZ_CP014119.1|WP_002438338.1|435954_436305_+|DUF4889-domain-containing-protein
MKNKKGLGIGLITIMIIVCIVLVIMMFVGGKKESYYGIMKDSTTIDKMINTKNEKIEKNVELPKDANVSVKKEDFVMLFKDEKTGKITKVKKVNHDDVPHGLMSKIHDMGNMKHGM
>NZ_CP014119.1|WP_002456062.1|435341_435764_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MNKQQVTKAIEKVLNSSKIGVLSTAHHNKPNSRYMVFYNDDLNLYTKTNINSLKVEEIENNPDAHILLGYNETTNNSFVEIDATIEVVKNQKVIDWLWETQDKTFFNSKEDPELCVLKVIPRSIKLMNDDELDTPATIEL
>NZ_CP014119.1|WP_002438342.1|433163_435269_+|AraC-family-transcriptional-regulator-Rsp
MTCFLNIYKEYHSPPERNINRIILMFSLTNDLKITINGETKDLGNHIAIINQSDIYFINSASNLVLLSIPVIYFYSKDNKFFKCYFDRHLLQSSSFVKTIILQAIQHLIKGENQDEQSISKIIQTLLKEAVIRYKKKYIPQIAVNHSVFTEGLTFIHSKVSQSLSLREVAQHCNISESYCSNLFARYLNMNFKDYFTSLKVIDSIKRLLSSEDSINAISEQSGFSSHTNFTNQFKNYLGCSPKQYRTIISKLDSLPSISFSDTDFSQYIDLINQFEFSDHLATETTERDINEFYPQDQTKNSKAFIRFQNFNELFQFVFNEYYNIDFTSLPQAVIFINDITDISTREVNFNLLNRCFEKLFEKNIGLAMRLTSTNEFESIKEIILLFLNSHQDYKMNKKMVKFMLVFETKNMSVNDIHLCHLKIKNKNKAIRYSITVEGLLHQNSSIDRTYDMMKRLNFDYYFIDIENLETKNSLITKRKSYLHSSTHFENYKQFILDSGIPSTKFVYNNLSLKCFKYTNNGTYPLQLSDLVCHLVALMRYGGGVSYQLIEDESPFIALFNRYGSPLPLMHLYKLIEPFLNEPLEIANNFLMSRKDGNYHFLLFNKINDRYLSDSQQRYVFKNTLSTNSLIIIKTLNHEHGAIQNLLPQTKQQFYIERSILDELDKSNQPKTELAIQHDHHLPFQVTLKHDEVKYICFKPS
>NZ_CP014119.1|WP_001831516.1|431623_432001_+|YbgA-family-protein
MKERGKIEKLWREEKYRVLFHDQNAYHSIRTLLKSPTTLGEVKEHITHALTITPTKGSVINAFEHMWGYFKKQCTQYEKQHSRELKALYIENQIDYFELLSFLKNLADKYAVEYLQQSTILNITK
>NZ_CP014119.1|WP_002456063.1|430024_431470_-|PTS-sucrose-transporter-subunit-IIBC
MSYKKSAEEILKAIGGEENLDAMAHCATRLRLVLNDESKVDEDTLSNMDVVKGTFSTGGQYQIIIGSGTVNKVFNELEKITGKEASTTSEVKDKSSKHMNPFQKFVKMLSDIFVPIIPAIVAGGLLMGLNNIFTAKDLFYDGKSIIDVHSQFSGLADMINIFANAPFTLLPILIGFSAAKRFGGNPYLGAALGMILVHPGLMSAYDFPKALEEGKAIPHWDVFGLHINEVGYQGQVLPMLVATYILATIEKWLRKVIPTVLDNLLTPLLSIFITAFITFLFVGPVTRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNIAQGGAALAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAVAGSGIGAAYISFFKVKAIALGTAGLPGFISINPTHAGWLHYLIGMLIAFVVSVVVTLVLSRRKTNKTAVES
>NZ_CP014119.1|WP_002438349.1|428987_429935_+|magnesium-transporter-CorA-family-protein
MITAYKHALHHPSQIIETEINHSASWINVVEPDREEIEGLMEFYNIPEDFIRDPLDSEESARIEYDEDTGYSLIIIDLPIVNSTNRRVLSFVTIPLGIIIGNGIVMTVCDAENEFLENFAKQEDINLKFHSRFALEILTTIANHYNRNLRLLNKSRIRIERELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLVIENNQAIETTELHQRILESITSSYASLLSNDMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDHSYVSWIIVVGISLILVAIVSIFLWKKQKL
>NZ_CP014119.1|WP_107508710.1|426530_426830_-|transporter
MGPHEFIEFPIVVANPKKEGTFKWNATQTYDNGDVVKWTGKEDSAHPTPTTTVKKGANPNDTHSDSSQGDSIVLWIVAIVAIVISLIALFKQAHPKKFN
>NZ_CP014119.1|WP_001831504.1|425900_426317_-|DUF2871-domain-containing-protein
MRRLLYSFLFYMVIGLLSGFYYRELTKAHDFVGDTQLSLVHTHTLILGMFMFLLLLPLEKVFKLSSYYLFNWFFFVYHLGVLITISMMTVKGTFQVIGKKFSPEMFAGFAGIGHTGMLAGLLLLFFLLRQAILTEPKK
>NZ_CP014119.1|WP_002438356.1|425430_425832_-|GNAT-family-N-acetyltransferase
MTKIHFEAPSPEDYCNLRANAGMSSKSIEAAIKGLPHACFNVTLYENDMLIGMGRVIGDGGTVFQIVDIAVKDIYQGLGHGMAIMHEIMKYIESVAEEGTYVSLIADYPADQLYEKFGFKSTEPYSKGMYIKY
>NZ_CP014119.1|WP_002438357.1|424374_425367_+|acryloyl-CoA-reductase
MVEKFKAFVVDQDDNGIVSNSYKELTKDDLPEGDVLIKVHYSGINYKDALATQDHNKIVKQYPMVPGIDLAGTIEETNAPGFEVGDKVIVTSYDLGVSHYGGFSEYARVKSEWVIELPEDLTLEEAMIYGTAGYTAGLAIEQLEKSGMSIEGKEVLVRGATGGVGTISLLMLNNLGYDVIASTGRDDAEEKLKKLGAKEVIGRLPEDNSKPLEKRTWQAAIDPVGGENLPYIVKRLDNNGSVALIGMTGGNNFETTVFPFILRGASIIGIDSVFTPIKLRKRVWRRLAKDLKPQQLHDIKHVISFDEIPKAIDQVINHNNTGRIVIDFNV
>NZ_CP014119.1|WP_002456060.1|436587_437868_-|cation:dicarboxylase-symporter-family-transporter
MALFKKKISLPTQVIIALVLGVIAGLLLYGQDDVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKVGSYGWKAILYFEIITTIAIGLGLIIGNLFKPGSGLDPDKLPKGDITKYQSSAHSAEQATTYGNHLIDTLVHIVPTNLFESMAKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLFKLLVVVVFAMVFFVIVVLGIVARMVGISIFSIMKILKSELLLAFSTSSSEAVLPIMMKKMERFGSPKDVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYDIHLSLTEQLVLMATLMIASKGMAGVPGVSIVVLLTTLTSMNITAQGLALIIGIDRLLDMVRTCVNVIGNALSTVVIAKWENVYDKEKGQNYLNSI
>NZ_CP014119.1|WP_001831482.1|438032_438398_-|DUF3139-domain-containing-protein
MSKKQVIFRVIIILIISLILAIAFFFGLKAYQGHKNLELIDSYMSDHHLNDKVKKDKTSYSTKKGLYYKEVVFKDEPNVTYVIQPISTSKGIFIEGFDSETKKSIKKAKHSDFDQKYKPSK
>NZ_CP014119.1|WP_002438333.1|438521_439151_-|nitroreductase-family-protein
MTRINDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVESDEMKEKVKESFGFNSRQLTTSSAMLIIFGDLQNYEKAEQIYGDAVEQQLMTEDIKAQLLDWILPYYKNLSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDSDRYLPVLAIAIGKKAQDAHDSVRLRIDDVREFL
>NZ_CP014119.1|WP_002438330.1|439314_439761_+|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYTDYLKEYGLTYTGYIVLMAIEDDEKLNIKKLGERVFLDSGTLTPLLKKLEKKNYVIRTREEQDERNLQISLTERGKDIQNVLSDISQSVFNEFNITQEETQNLVEDLQNFVTKNFDKTVEK
>NZ_CP014119.1|WP_002438328.1|440467_441631_-|NarK/NasA-family-nitrate-transporter
MNMKKGVSQLTLQTLSLVAGFMAWSIISPLMPFISQDVDISPGQISVILAIPVILGSVLRVPFGYLTNIVGAKWVFFWSFIVLLLPIFLLGQAQSPGMLMLSGFFLGIGGAIFSVGVTSVPKYFSKDKVGLANGIYGVGNIGTAVSSFCAPVLAGAIGWQNTVRSYLIILSIFAILMFFLGDKNEPKVKIPLMAQVKDLSKNYKLYYLSLWYFITFGAFVAFGIFLPNFLVDHFSIDKVDAGIRSGIFIALATFLRPVGGVIGDKFNAVQALIIDFVIMIIGALILSLSSHIVLFTIGCLAISICAGIGNGLIFKLAPSYFSKEAGSANGIVSMMGGLGGFFPPLVITFVTSITGSSHLAFFFLAIFGVIALITMIHLNKKEKAIRI
>NZ_CP014119.1|WP_002438326.1|441887_442544_-|response-regulator-transcription-factor
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF
>NZ_CP014119.1|WP_002456059.1|442572_443607_-|sensor-histidine-kinase
MLEQTDLSLEQLLKNYYETTNEKIVFVNRQGKIIAMNDAAKDILTEEDNYNAMTNAICHRCEGYSNEYDVQSCKDCFLETTQLQHSNFQVFMKTKDNEIKPFTAMYQNIDEQRGISAFTLQNVAPQIERQEKMYQQKMLHRSIQAQENERKRISRELHDSVIQDMLNIDVELRLLKYKHRDKVLAETSQRIEGLLSQLIDDIRNMSVELRPSSLDDLGIEAAFKSYFKQFEENYGMHIKYDSNIKGMRFDNEIETVVYRVVQEGVFNALKYAEVNEIEVSTHSDGKQLVAEVVDRGKGFSLDHHPKGSGLGLYGMRERAELVNGHVNIETHINRGTIITLDIPI
>NZ_CP014119.1|WP_001831592.1|443616_444069_-|GAF-domain-containing-protein
MEPESLKHNQHLQMNLDKLRAQEGYDFGGIALYDYHHTSSPIKWQYVSGNTNDRYKLIILRKGRGLAGMVMKTGKRMVIADVDTALSPEEKVKFPIILSESLTAVVAVPLWLENSMYGVLLLGQRNHQPLPQSLDQLNIEKQIGIFTEIN
>NZ_CP014119.1|WP_002438321.1|444088_444766_-|respiratory-nitrate-reductase-subunit-gamma
MLNQFVWVIYPYLCLAIFVIGHIARYKYDQFSWTAKSSEMIEKKRLKWGSLLFHLGIIPVFFGHVVGLLIPANWLEAIGVNNHIYHIGAVYIGSVFGIITLIGMLLLTLRRLSIKNVRRLSSFSDIFVNIVLLIILIMGCYSTLVTNAIQPEFDYRQTIAIWFRHLFMFSPNADLMLNVPWSFKLHILLGFTVFACWPFTRLVHVWSVPLSYMNRRYIVYRKNKI
>NZ_CP014119.1|WP_173020228.1|444758_445349_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MEGSSVINLEQLSLYQDSLGYLGQQMNFPEKMTFHPKIFEETISKSHPGYEDLLAYREVMMNYTLSEIKAIYTDTFDFSKKHPLYMTFNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDFLPLMLQFLQVADFKNDSRAQKNLQLVIMIIEDGTYEMANTLAENNNPYAYVVSALRKTLKACIVPLKEVENHA

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Crispr_ID: NZ_CP014119_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_2

552106-552189

Orphan

Consensus_repeat	Method
CAACTTGCCTTGTCCGTGGAATTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014119_2

>merge|NZ_CP014119|2|552106-552189|CRISPRCasFinder
CAACTTGCCTTGTCCGTGGAATTTCTCGGTGAAATTCTCTTTGTTGGGGCCCCGAACCCCAACTTGCCTTGTCCGTAGAATTTC

>NZ_CP014119|2|2|552106-552189|CRISPRCasFinder
CAACTTGCCTTGTCCGTGGAATTTC	TCGGTGAAATTCTCTTTGTTGGGGCCCCGAACCC
CAACTTGCCTTGTCCGTAGAATTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_002456684.1\|546795_547845_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP014119.1\|WP_002456688.1\|552871_554365_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143435
NZ_CP014119.1\|WP_001831584.1\|541679_542294_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP014119.1\|WP_002468270.1\|549588_550536_-\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_CP014119.1\|WP_002438166.1\|542467_544432_+\|fructose-1,6-bisphosphatase	unknown	unknown	gnl\|CDD\|226373
NZ_CP014119.1\|WP_002469549.1\|559830_559986_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002438140.1\|558771_559266_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP014119.1\|WP_001831506.1\|539804_540572_+\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_CP014119.1\|WP_001832363.1\|561778_562678_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP014119.1\|WP_104832442.1\|551245_552043_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|225312
NZ_CP014119.1\|WP_001831599.1\|557984_558596_-\|class-A-sortase-SrtA	unknown	unknown	gnl\|CDD\|130148
NZ_CP014119.1\|WP_002469543.1\|548093_549518_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143407
NZ_CP014119.1\|WP_002468280.1\|554742_555405_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP014119.1\|WP_104832443.1\|560218_561397_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_CP014119.1\|WP_001831616.1\|540573_541572_+\|thiazole-biosynthesis-adenylyltransferase-ThiF	unknown	unknown	gnl\|CDD\|274094
NZ_CP014119.1\|WP_002438142.1\|556830_557640_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP014119.1\|WP_002456690.1\|555651_556644_+\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|183550
NZ_CP014119.1\|WP_002456683.1\|544660_546448_-\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP014119.1\|WP_089418815.1\|559329_559506_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_001831535.1\|550702_550984_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_002456684.1\|546795_547845_+\|membrane-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	1.03006e-86
NZ_CP014119.1\|WP_002456688.1\|552871_554365_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143435	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.	0
NZ_CP014119.1\|WP_001831584.1\|541679_542294_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.68558e-44
NZ_CP014119.1\|WP_002468270.1\|549588_550536_-\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	3.07244e-113
NZ_CP014119.1\|WP_002438166.1\|542467_544432_+\|fructose-1,6-bisphosphatase	gnl\|CDD\|226373	COG3855, Fbp, Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism].	0
NZ_CP014119.1\|WP_002438140.1\|558771_559266_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	4.36783e-63
NZ_CP014119.1\|WP_001831506.1\|539804_540572_+\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	3.65912e-146
NZ_CP014119.1\|WP_001832363.1\|561778_562678_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	8.36299e-108
NZ_CP014119.1\|WP_104832442.1\|551245_552043_+\|VOC-family-protein	gnl\|CDD\|225312	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only].	1.57073e-100
NZ_CP014119.1\|WP_001831599.1\|557984_558596_-\|class-A-sortase-SrtA	gnl\|CDD\|130148	TIGR01076, Uncharacterized_protein_YhcS, LPXTG-site transpeptidase (sortase) family protein. This family includes Staphylococcus aureus sortase, a transpeptidase that attaches surface proteins by the Thr of an LPXTG motif to the cell wall. It also includes a protein required for correct assembly of an LPXTG-containing fimbrial protein, a set of homologous proteins from Streptococcus pneumoniae, in which LPXTG proteins are common. However, related proteins are found in Bacillus subtilis and Methanobacterium thermoautotrophicum, in which LPXTG-mediated cell wall attachment is not known. [Cell envelope, Other, Protein fate, Protein and peptide secretion and trafficking].	1.43034e-42
NZ_CP014119.1\|WP_002469543.1\|548093_549518_+\|aldehyde-dehydrogenase	gnl\|CDD\|143407	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.	0
NZ_CP014119.1\|WP_002468280.1\|554742_555405_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	5.61762e-76
NZ_CP014119.1\|WP_104832443.1\|560218_561397_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	4.26255e-20
NZ_CP014119.1\|WP_001831616.1\|540573_541572_+\|thiazole-biosynthesis-adenylyltransferase-ThiF	gnl\|CDD\|274094	TIGR02356, molybdopterin_biosynthesis_protein_moeB, thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.34753e-109
NZ_CP014119.1\|WP_002438142.1\|556830_557640_-\|HAD-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	6.69679e-48
NZ_CP014119.1\|WP_002456690.1\|555651_556644_+\|D-lactate-dehydrogenase	gnl\|CDD\|183550	PRK12480, PRK12480, D-lactate dehydrogenase; Provisional.	0
NZ_CP014119.1\|WP_002456683.1\|544660_546448_-\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	4.82164e-44
NZ_CP014119.1\|WP_001831535.1\|550702_550984_+\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	1.79195e-31

>NZ_CP014119.1|WP_104832442.1|551245_552043_+|VOC-family-protein
MTNFHSIDATQVTNVTLNVKDLNKLTDFYSNVLGFSIEKQTNQQTVFNIGNLGYTLTLNELNNGRQPEFREAGLFHVAYLLPTRSDLADFLYHANTLNIAMGGGDHLVSEALYFTDPEGNGIEVYHDRPSEDWVWRDGFVKMDTLEVNVNDLMAQRSNEGWQGWPEEGKIGHLHLKTHNLESAYEFYVEKLGFEHISNFPQALFMSTQKYHHHIATNTWQSNKIRTQNEQTYGLCHFDIYQPNANTTHVTSPEGFDITIHGNETK
>NZ_CP014119.1|WP_001831535.1|550702_550984_+|N-acetyltransferase
MAAEIKQGDHKFYVGNDENNPKAVITFKEVDNNEIDIDHTGVSDELGGQGLGKKLVNRVVEHARENNLKIIASCPFAKNVLEKDDHAQDVYLG
>NZ_CP014119.1|WP_002468270.1|549588_550536_-|zinc-ABC-transporter-substrate-binding-protein
MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDAQSIYPAGADLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKITNSMTNNSMKLALAEGLKQSDFIHSKDHDENHEHHSHHEESNQDPHVWLDPVLNQKFAFMIKEKLIEKDPKHQAYYNKNYKIVNKDIVHIDQQLQSITKHSKRDKVVISHDSLGYLAHRYGFKQQGVKGMNDEEPSQKEILNIVKDIQHSHAPYVLYEQNITSKITDVIKKETDTKPLSFHNLAVLTKEEQNDDSISYQSLMKKNIYVLNRALNN
>NZ_CP014119.1|WP_002469543.1|548093_549518_+|aldehyde-dehydrogenase
MTNQLFINNEFIESQSKETMDVINPATGEAFDTITLATEEEVNDAIEKSQQAQLEWERVPQPTRAEHVKLLIPLLEKNRDEIAQLYVKEQGKTLAQAYGEIDKSISFIDYMTSLSMSDKGRVLQNSIANETIQIINKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLRLAELFRASTIPAGLFQIVPGTGETVGTQLASHKDIQLISLTGSMRAGKSVYENAAQTVKKVNLELGGNAPVIVTSNADLDKAVNYIVTARINNAGQVCTCPERIFVHEDVHDDFLNKVTSKMKSLTVGDPFDENTDYGAIINQKQLDSIHEKVQDAIKNGATLMTGGHQLKRHGFFYAPTVLDNVRKDYNVFKDEIFGPVLAITTYRDFEQVIEDANDTNAGLSSYIFSENLTEVMTATERLKFGEVYANCEAEEVVNGYHAGWRESGLGGADGIHGFEEYYNTTVSYIRY
>NZ_CP014119.1|WP_002456684.1|546795_547845_+|membrane-protein
MNNVKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGIYSIGGIFITGLILTLGGIFVLNTGFRLRSQNHSESIRYYLHPTIAKLFDIILTVFLFSLAIIMTAGGASTINESFGLPFWLSSFILVILILITLFLKFDRLIAVLGGVTPFLVAVVVMIAVYYFITGDLNFSDVSQYSNQNKSISPGWWFDAINYASLQIAAAFSFLTVMGGKLRYQSSTIYGGLIGGIIVTLLLLLINFGLVTEFNQIKEVALPSLLLAKQISPSIGIIMSVIMVLVIYNTVVGLMYAFASRFSRPFTKRYYILIVMMAIITFACTFVGFISLIGKVFPIMGLFGFILLIPVIYKGILRK
>NZ_CP014119.1|WP_002456683.1|544660_546448_-|sodium:proton-antiporter
MSLELPVMLTIVLFLALGIFSQWLASRIKWPSIVVMAIVGLLVGPIFGLANPKEALGPEAFSSIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGAGIAWILGAIALHVTMNFPLSISFVIGGLFLITGPTVIQPLLKQAKVKRNVDSVLRWESIILDPIGPIIALTAFYVFQIFEEGIGLVVIILFILKLLAAILIGFGAAFLFNWLISQDKIPQSLMPPIQLVFILLTFSICDEILSESGLLAVTIFGLMMARKKRHDLIFKESDHFIDNASSILVSTVFILITSSLTKDVLLNVLSWQLILFSLVMIVLVRPISVLLSTLGTEITKKERAVVALMAPRGIVVLTVAQFFSSLFMDDKIPMAQYITPVTFGLVFITVVIYGFGFTPLSKLFGVASTEPPGVIIVGESEFSFHLGINLRDHGIPVMMFNLFENTSEKAHEAGFEVFKGNLLSSNDRIYSDLLRYNKCILMTQSFIFNSLAFNELVPEFGLNNVDMMPVSFNDEQARNNLNGPIRNHILFDENHTPRWFNQFITQHNIVEVPAEDYEKITENDMLIYHINEDKEVTFKRSNRDIPEHETGVYGILKNAYLT
>NZ_CP014119.1|WP_002438166.1|542467_544432_+|fructose-1,6-bisphosphatase
MTHITESEMKQKYLDLLSQKFDSAEKLATEIINLESILELPKGTEHFVSDLHGEYESFQHVLRNGSGNVRAKINDIFKDKLSQQEINDLAALVYYPEEKLKLVKNNFDSIGTLNIWYITTIQRLIDLITYCSSKYTRSKLRKALPEQYVYIIEELLYKSNEFHNKKPYYETLVNQIIELEQSDDLIIGLSYTVQRLVVDHLHVVGDIYDRGPKPDKIMDTLINYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKYYDAENPAFKPKKRPDKDVSLTKREESQITKIHQAIAMIQFKLEMPIIKRRPSFEMEERLVLEKIDYDNNEITIYNKTYPLKDTCFQTVNPNNPAELLAEEKEVMDKLLLSFQQSEKLRRHMSFLMRKGKLYLPYNGNLLIHGCIPVDENGEMESFEIEGERLSGRELLDVFEYHVRRAFDHKESTEDISTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEEKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHKEFNRKEKVLSMGADELSVKRVVDEELQRKKIRDTNIGKQLQDQIDILKILMHDRYLT
>NZ_CP014119.1|WP_001831584.1|541679_542294_+|DedA-family-protein
MEQIITDFISKWGYTAIFILILLENVLPVVPSEIILTFAGLLSVKSHLSIWTLLIIATIASFIGLLILYYICRLISEEKLYRFVDRHGKWMKLKSKDLKRANDWFKKYGAWAVFLCRFVPVLRVLITIPAGINRMNVIQFTTLSLIGTTIWNFALILLGRLLSDSFDALMNGIHTYSRIMYVIIIIAVIYFVIRYLMKRRRSVK
>NZ_CP014119.1|WP_001831616.1|540573_541572_+|thiazole-biosynthesis-adenylyltransferase-ThiF
MSRYERQTRFAPFGEEGQQKLSSSQILIFGAGALGSHIVDQLARMGAHHIAIVDMDIVEISNLHRQTLFDEEDAHTLISKVEAIKHKVNQININVNLTTYDLEVTSSNIENLIKNVEPDIIIDGMDNFKIRYLINEVCHKYQIPWVYGAAVGSKGSVYGIDHQGPCLKCLLQTIPDTGESCAINGVIPPVISMIASYEVAEAVRYLSGKGFSKQLITIDAFNINYKSMNVDALKNKDCPVCEKHEYTLLESQQERTIEDLCGNAYLFRFPPKAFKHAAHFPGNMVKSTSFAKLIQYQTYEFTLFKDGRMNAYGIHNDEEAHHLYNTLLKSIR
>NZ_CP014119.1|WP_001831506.1|539804_540572_+|thiazole-synthase
MFKIGNLELQSRLLLGTGKFENEEVQSKAIEASETNVLTFAVRRMNLYDRNLPNPLANVNLKDFITFPNTAGAKTAQEAIRIAEIANHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYTVCPYISNDLVLAQRLEELGVHAVMPLASPIGTGRGINNPLNLSYIIENASVPVIVDAGIGSPKDACHAMELGADGILLNTAISAAKDPVKMAEAMKLGINAGRLSYEAGRIPVKYTAQASSPSEGLGFL
>NZ_CP014119.1|WP_002456688.1|552871_554365_-|aldehyde-dehydrogenase-family-protein
MTNINVRNYIDESYGLFINNEFQASDSGETLTVSNPANGEDLAKVARAGKKDVDKAVQAAHDAFDSWSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVLTTDEGSVNEIDQNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKIFQEVLPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAERIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYNELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWINTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNQTKGLY
>NZ_CP014119.1|WP_002468280.1|554742_555405_-|NAD(P)H-dependent-oxidoreductase
MNQMNQTIIDAFHFRHATKEFDPTKKISDEDFNTILETGRLSPSSLGLEPWHFVVVQNKELREKLKAYSWGAQKQLDTASHFVLIFARKNVTAHTDYVQHLLRGVKKYEESTIPAVENKFDDFQESFHIADNERTLYDWASKQTYIALANMMTSAALLGIDSCPIEGFDLDKVTEILSDEGVLDTEQFGISVMVGFGYRAQEPKHGKVRQNEDDIISWIE
>NZ_CP014119.1|WP_002456690.1|555651_556644_+|D-lactate-dehydrogenase
MTKIMFFGTRAYEKDMALRWGKKNNIDVTTSTELLSVDTVDQLKDYDGVTTMQFGKLEPEVYPKLESYGIKQIAQRTAGFDMYDLELAKKHEIIISNIPSYSPETIAEYSVSIALQLVRKFPTIEKRVQAHNFTWASPIMSRPVKNMTVAIIGTGRIGAATGKIYAGFGARVVGYDAYPNHSLSFLEYKETVEDAIKDADIISLHVPANKDSFHLFDNNMFKNVKKGAVLVNAARGAVINTPDLIEAVNNGTLSGAAIDTYENEANYFTFDCSNQTIDDPILLDLIRNENILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCDTRLN
>NZ_CP014119.1|WP_002438142.1|556830_557640_-|HAD-family-hydrolase
MIKAIAVDMDGTFLDTNKQFDRNRFETIFKELIDKNIKFIAASGNQFAKLKSIFGDREMFFISENGAVIYKGNQLYNYRSFDQYIFQKVVNYLNLNQKINNLIICGVKSAYILKETSEAFKQDARTYYHQLIEVDSLQTLPDDDYVKIAFNINRQTHPDLDEKLALKFKDDIKLVSSGRDSIDVIMPNMTKGQALSRLLKEWQMPASHLMAFGDANNDKDMLELAEHSYVMANSEDQSLFDIASHVAPSNDEQGVLSTIENVVLGYSNK
>NZ_CP014119.1|WP_001831599.1|557984_558596_-|class-A-sortase-SrtA
MKQWMNRLITLIGVLLIILAIYLFSKPYIDNYLHEKDNDHKIENYDKKEKEQTKTSKSTPKIPSDKSKMAGYIEVPDAQIKEPVYPGPATPEQLNRGVSFAEGDESLNQQNISIAGHTFTDRSHYQFTNLKSAKIGSKVYFKTGNQTRKYKITKIRDVKPTEVKVLDEHPNKKNQLTLITCDDYNEETGVWETRKIFIATQIN
>NZ_CP014119.1|WP_002438140.1|558771_559266_+|N-acetyltransferase
MIRFARLEDLQGILTIYNDAILNTTAVYTYKPQQLDERLQWYQSKAKINEPIWVYEKEGKVVGFATYGSFRQWPAYLYTIEHSIYVHQQYRGLGIASQLLENLIRYAKEQGYRTIVAGIDASNMDSIALHKKFDFSHAGTIKNVGYKFDRWLDLSFYQYDLSDS
>NZ_CP014119.1|WP_089418815.1|559329_559506_-|hypothetical-protein
MLRLFLIFITFIINTTITYLWTIEGTWPNLLFKSLSLSMIIVFMFYYIRFVIENKKED
>NZ_CP014119.1|WP_002469549.1|559830_559986_+|hypothetical-protein
MYKDYNMTQHTLLMETSVLISTNDISRHVNDIAETIPDTEFDEFRHYRGLI
>NZ_CP014119.1|WP_104832443.1|560218_561397_-|IS110-family-transposase
MSKRSSVVAHYKNGKFQKEFFIQNNKNGYNYLLKYLNDLHHPQLIFESTGIYSRGMQRFCCVNQINYIQMNPLEAKFKTSTLRSWKTDQADAHKLACLGPTLKQTGNLPIHELIFFELRERVRFHLEIENEQNRLKFQILELLHQTFPGLERLFSSRYSIIALNIAEIFTHPDMVLDIDKDVLITHIFNSTDKGMSMDKATKYALQLRVIAQESYPNVDRHSFLVEKLRLLIQQLKQSIHHLKQLDDAMIQLAQQLDYFENIHSIPGIGKLSTAMIIGEIGDIKRFKSNKQLNAFVGIDIKRYQSGHTHCRDTINKRGNKKARKLLFWVIMNIIRGQHHYDNHVVDYYYKLRKQPNEKPHKTAIIACINRLLKTIHYLVMNHKLYDYQMSPH
>NZ_CP014119.1|WP_001832363.1|561778_562678_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFDSIRETIDYSVENNISFADMMINDEMEREGKSREEVRDLMRQNLNVMREAVEKGTTGDGVESVTGYTGHDAAKLRDYNENNHALSGHEMIDAVKGAVATNEVNAAMGIICATPTAGSSGTIPGVIFKLEKTHNITEDQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAAAAAVSIFNGSPEQSGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLALAGVESQIPVDEVIGAMDRVGRNLPASLRETGLGGLAGTPTGEEIKRKIFGEADNMVKNK

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Crispr_ID: NZ_CP014119_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_3

772660-772864

Orphan

Consensus_repeat	Method
TCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTTGCTGATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014119_3

>merge|NZ_CP014119|3|772660-772864|CRISPRCasFinder
TCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTCGCTGATTCGCTCGCTTTTATTGATGCGCTATCAGACATCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTTGCTGATTCGCTTGCTTTTATTGATGCGCTATCAGACGTCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTTGCTGATTC

>NZ_CP014119|3|3|772660-772864|CRISPRCasFinder
TCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTCGCTGATTC	GCTCGCTTTTATTGATGCGCTATCAGACATCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTTGCTGATTCGCTTGCTTTTATTGATGCGCTATCAGACG
TCGACGTACTCGCTGATTCTGATAACTTCTTACTTGTACTTGCTGATTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_001831846.1\|766788_767988_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	unknown	unknown	gnl\|CDD\|237095
NZ_CP014119.1\|WP_002437878.1\|763106_763679_-\|accessory-Sec-system-protein-Asp3	unknown	unknown	gnl\|CDD\|163423
NZ_CP014119.1\|WP_002437864.1\|777494_778310_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP014119.1\|WP_001831876.1\|759197_760706_-\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_CP014119.1\|WP_001831842.1\|757411_757759_-\|membrane-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_104832450.1\|786476_787655_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_CP014119.1\|WP_002437853.1\|784468_785644_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP014119.1\|WP_002456753.1\|756258_756615_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184803
NZ_CP014119.1\|WP_002456320.1\|775917_777219_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002456755.1\|760723_763114_-\|accessory-Sec-system-translocase-SecA2	unknown	unknown	gnl\|CDD\|163426
NZ_CP014119.1\|WP_002437845.1\|788155_790222_-\|YSIRK-domain-containing-triacylglycerol-lipase-GehC	unknown	unknown	gnl\|CDD\|224001
NZ_CP014119.1\|WP_001832016.1\|782833_784369_+\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808
NZ_CP014119.1\|WP_002456758.1\|781186_782737_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378253
NZ_CP014119.1\|WP_002456757.1\|765214_766771_-\|accessory-Sec-system-protein-Asp1	unknown	unknown	gnl\|CDD\|274740
NZ_CP014119.1\|WP_002456754.1\|757864_759205_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_CP014119.1\|WP_172643077.1\|763665_765234_-\|accessory-Sec-system-protein-Asp2	unknown	unknown	gnl\|CDD\|274739
NZ_CP014119.1\|WP_001832011.1\|779108_779882_-\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|131368
NZ_CP014119.1\|WP_001831852.1\|756762_757242_-\|peptide-methionine-(S)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|235497
NZ_CP014119.1\|WP_001832012.1\|779995_780952_-\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225762
NZ_CP014119.1\|WP_002437862.1\|778306_779059_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_001831846.1\|766788_767988_-\|accessory-Sec-system-protein-translocase-subunit-SecY2	gnl\|CDD\|237095	PRK12417, secY, preprotein translocase subunit SecY; Reviewed.	2.00882e-176
NZ_CP014119.1\|WP_002437878.1\|763106_763679_-\|accessory-Sec-system-protein-Asp3	gnl\|CDD\|163423	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3. This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.20812e-47
NZ_CP014119.1\|WP_002437864.1\|777494_778310_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	9.86894e-84
NZ_CP014119.1\|WP_001831876.1\|759197_760706_-\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_CP014119.1\|WP_104832450.1\|786476_787655_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	4.07443e-20
NZ_CP014119.1\|WP_002437853.1\|784468_785644_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.45254e-73
NZ_CP014119.1\|WP_002456753.1\|756258_756615_+\|hypothetical-protein	gnl\|CDD\|184803	PRK14717, PRK14717, putative glycine/sarcosine/betaine reductase complex protein A; Provisional.	6.4525e-05
NZ_CP014119.1\|WP_002456755.1\|760723_763114_-\|accessory-Sec-system-translocase-SecA2	gnl\|CDD\|163426	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2. Members of this protein family are homologous to SecA and part of the accessory Sec system. This system, including both five core proteins for export and a variable number of proteins for glycosylation, operates in certain Gram-positive pathogens for the maturation and delivery of serine-rich glycoproteins such as the cell surface glycoprotein GspB in Streptococcus gordonii. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP014119.1\|WP_002437845.1\|788155_790222_-\|YSIRK-domain-containing-triacylglycerol-lipase-GehC	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	4.21412e-71
NZ_CP014119.1\|WP_001832016.1\|782833_784369_+\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	6.67816e-86
NZ_CP014119.1\|WP_002456758.1\|781186_782737_+\|hypothetical-protein	gnl\|CDD\|378253	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system. This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins.	0.00381721
NZ_CP014119.1\|WP_002456757.1\|765214_766771_-\|accessory-Sec-system-protein-Asp1	gnl\|CDD\|274740	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP014119.1\|WP_002456754.1\|757864_759205_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	0
NZ_CP014119.1\|WP_172643077.1\|763665_765234_-\|accessory-Sec-system-protein-Asp2	gnl\|CDD\|274739	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP014119.1\|WP_001832011.1\|779108_779882_-\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|131368	TIGR02315, Phosphonates_import_ATP-binding_protein_PhnC, phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates. [Transport and binding proteins, Anions].	5.60016e-149
NZ_CP014119.1\|WP_001831852.1\|756762_757242_-\|peptide-methionine-(S)-S-oxide-reductase	gnl\|CDD\|235497	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase.	2.09416e-110
NZ_CP014119.1\|WP_001832012.1\|779995_780952_-\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|225762	COG3221, PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism].	2.51772e-94
NZ_CP014119.1\|WP_002437862.1\|778306_779059_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	2.90133e-96

>NZ_CP014119.1|WP_001831846.1|766788_767988_-|accessory-Sec-system-protein-translocase-subunit-SecY2
MFKKFEYKILYKRIFFTCLILVIYIIGSNISIVSNENLRTHKDSFFKLAITNVGGDLHTLNIFSLGLGPWLSSMIILTLINHKSNDKVKTQTRRERHFKERALTLIISAAQGFYIIHSYINKHAIKDSNMLILLLVLITGTLLMVWLADQNTTYGISGPMPIVLMSLVKSIFNTHFPKLNSSASLITMIIVLLVLALFILFFIELTEYRIEYNDIMNISAKDIPSYLSWKLNPAGSISIMVSLSLFMLTNNIVNFIGRFIVNHNFETHVFNFTNPVGITIYLLLQMILGYFLSRLLINTKRKSKEFLKNGNYFEGIQPGQQTEKFLGSKARRICWFGSIVVAIVLAIPMYSALLVPHLLKEVYFTTQMIVFVYIGINIAETIRAYLYFDSYKQILNKYW
>NZ_CP014119.1|WP_002456757.1|765214_766771_-|accessory-Sec-system-protein-Asp1
MKRFIPAWYSRNRWWESTSRPFYLKKQYTDFDDMISLMTMHSSNNVDYQLIVLNFSPYLRTFLHRYDLYESHYWSVFDEIQGVGHQTPQAIDYRDLSWPEGTEFIFTPFQIQAITGDNTFSKIHFSQEGYLMWVEDYKYSTIQRRFVFDDRGFISAVRTYTSDGDNNKKHYFSKDGEEIFVEDLNVNTVTINKNFQSKFKKVTYSSMAELIEEKFQSYVERELNEDDSVIVASDERHNSMMARTIDASSLCFSIFTERNKVVTQDLYDSISRAYYCLVDTQANQNMIEHYAGLNMNDINLLRVTPFDAKSLPNQSSQLYDTYIGLWIDGLDEIEIREIVNSLFQYIQHKDGYKLKILTKSRDNLTENLIDEVAHLNDLYHQEKKEISDVIEDVIQNKKETIIDVETVPFEEDLVSVISKLRVVVDLSLEPKLFLQICCIGAGIPQINKKRTDYVKHMHNGYIIDDISQTVESLDYFLAHLKNWNYSYAYSMRLTDDFSSINIIHQINQLFKGDVSSGT
>NZ_CP014119.1|WP_172643077.1|763665_765234_-|accessory-Sec-system-protein-Asp2
MFQVARKFRVLQVGGHDLGSLFNQKSNVEWDYFDVGLFDFESGYQDVVVHILDEKGQFDFVFVREKYSDSLMKLLSLVSTPYNTVIDNEYWDNQYQQDKTIQRNFIKPLIYENEEQLQQKLEAVTFPGQYGDKVKPIHCRVSIHFDGSYQFNGNESIEVSGRFGESYQPLITWSQNIIADANKVNQIWPEFKVEGDAKIQYTLRLTPVYSTDQPVEKLIYEQDDLDTPIELPARPYQTYVSVSIKAKGKGTLFIGAIHKRWSRLELGQFILGGKRYSDENKQEFIHYFHPGDLKPPLNVYFSGYRTAEGFEGYFMMKRMNAPFILIADPRIEGGAFYLGSENYEQAIRKVIQNALDYLGFANNQLILSGLSMGSFGALYYATKLNPAAVIVGKPLINLGTIANNMKLVRPNDFGTSLDILRLNQNGITNKDVVQLDNHFWKQIQHSDLSMTTFAIAYMEHDDYDKYAFQDLLPVLTKQHARVISKRIPGRHNDDSATVTHWFINFYHLIMEERFGRVTHARR
>NZ_CP014119.1|WP_002437878.1|763106_763679_-|accessory-Sec-system-protein-Asp3
MQEDRKFEVKWRLVNSSTFMYGTKLRFNQDNIYFENPLMPSGTIIHSWYMLTDFAEDRVSPKLPILKKGRQYQFQFNFEVEPEGAAYFKMKFYRKNKEILSHQILKNKKENIVYPREAYSYELELINAGMNHLSFHNIIVQELREDSNQAYEATQYIDPKKKLKVINQIITNIRTHHLDSSNYHRSDMNG
>NZ_CP014119.1|WP_002456755.1|760723_763114_-|accessory-Sec-system-translocase-SecA2
MAKGVNQIINNIRLRKLRKILNQINALSEEFSNFSDEALQAKTKEFKVYLNDNKASLNHILPQAYATVREASKRVLGMYPKDVQILGAIAMHQGNIAEMQTGEGKTLTATMPLYLNALTGKGAYLITTNDYLAKRDFLEMKPLYEWLGLSVSLGFVDIPEYEYAENEKYELYHHDIVYTTNGRLGFDYLIDNLADDIRAKFLPKLNFAIIDEVDSIILDAAQTPLVISGAPRVQSNLFHIVKTFVETLEKDKDFIVNFNKKEVWLTDEGSEKASHYFKVNSIYQQQYFDLVRMIHLSLRAKYLFKYNLDYFIFDGEIVLIDRITGRMLPGTKLQSGLHQAIEALENVEISQDMSVMATITFQNLFKQFDEFSGMTGTGKLGEKEFFDLYSKVVIEIPTHSPIERDDRPDRVFANGDKKNDAILKTVIDIHETQQPVLLITRTAEAAEYFSAELFKRDIPNNLLIAQNVAKEAQMIAEAGQLSAVTVATSMAGRGTDIKLSKEVHDIGGLAVIINEHMDNSRVDRQLRGRSGRQGDPGYSQIFVSLDDDLVKRWSNSNLAENKNLQTMDASKLENSALFKKRVKSIVNKAQRVSEETAMKNREMANEFEKSISVQRDKIYAERNHILEASDFDEFNFEQLARDVFTKDVKNLDLSSERALVNYIYENLSFVFDEDVSNINMQNDEAIIQFLIQQFTQQFNNRLEVAADSYLKLRFIQKSILKAIDSEWIEQVDNLQQLKASVNNRQNGQRNVIFEYHKVALETYEYMSEDIKRKMVRNLCLSILAFDKDGDMVIHFP
>NZ_CP014119.1|WP_001831876.1|759197_760706_-|accessory-Sec-system-glycosyltransferase-GtfA
MTIYNINFGIGWASSGVEYAQVYRAKLLRQLPYPTKFIFLDFIQSENIQTLTSNIGFKDDEVIWLYQYFTDVKIAPTTYTVDDLISELGNEVTRKEQNGKVLRLYLNNQQTFVTCYLKNANEHYVDRAEFVVNGMLIRKDFYSYVRTFSEYYAPFDNKAKIYMRQFYNENGSIAYREYIDEDEHVFVFDDARLYSKQALVAYFIRQLRLNSEDIIIIDRATDVGQAILENKGSSKVGVVVHAEHFSEGATDGTHILWNNYYEYQFENAQHIDFFITATDLQRQTLSEQFKQYKNDCPRIRTIPVGSIESLQYPEKERKPYSIMTASRLANEKHVDWIVEAVIKAKHQLPQLSFDIYGQGEEQEKIKNIITKHRAEDYIQIKGHRNLRTIYQQYELFIAASQSEGFGLTLMEAVGSGLGMIGFDVNYGSPTFIRHHQNGYLIPIDFEQASTDDITTQIAHMIIRYFEDGPIRAHEVSYDIAESFKTSHIVDLWRQLIEEVLYD
>NZ_CP014119.1|WP_002456754.1|757864_759205_-|accessory-Sec-system-glycosylation-chaperone-GtfB
MINLFENYNQETQELHQSLKRAGYNHFTIVINDDGFLPDDVTSPYRFFAAYQIYEDDTPAFFNDIDTPPFWEIKGDATMATITDMGELRGKIFYKEHYKTRVVSHVEWLDSKQRLRSVDYYTKEGFKFAETVYDLLGNAILKKYMTREGKEVIYENYVTNDVVVEYKGKSYFFDSYTEWIKFYLSEMGIEIKEVIFNTLSTPFLAIYHLPTLKKGILFWQEQSQGYVPGNMKVMLSPNLQSRFAVIVPNQNEYKLIKEQLSREEQQAVYASGYLYDTYKRNHYSKNVLTLTNSDQIPHVETLVRLHKDYQFHIGAKTEMSSKLLSLSQYENVKLYPIIKEQTVQTLYQQCDIYLDINEGNEIGNAVRSAYNHQLLIMGYKEVVHNQDFVAIENQFLVNDISQLSNALKEIGNHRGQFETRLALQQRHANAVPVSTFKYALVQALSG
>NZ_CP014119.1|WP_001831842.1|757411_757759_-|membrane-protein
MENFDKSYHDKTGDVLGALSYLSVFFAPVLFPLIVWIVGQPPASTYSRNALFNHILSWVCLVLGLISFAAGLSLIDSTNGVAVLVIGVIIGGILLIASLVLFIINIVKGIKLLMI
>NZ_CP014119.1|WP_001831852.1|756762_757242_-|peptide-methionine-(S)-S-oxide-reductase
METVYFAGGCLWGTQAFFNTIPGVIQTEAGRANGTSKCLDAPYDGYAECVKIHFDPAKTSILMLMDYLFEMINPYSLNQQGQDKGQKYRTGVYSESSKHLNEVKGYIKRREDAKQVMVEVQPLSNYVKSAEEHQNHLEKFPEDYYLCHVPPALLNKYKK
>NZ_CP014119.1|WP_002456753.1|756258_756615_+|hypothetical-protein
MVLRYATNLKLAKELYDASKPKLKGDQGMIDTFTNTFGLPENSVKLAGGVEAVAAGLFAASFLNKNISRLGSLAAISVLGVAAYKHFEAGHGKKGAQHALDLLGLSTLSLLDTFSCKK
>NZ_CP014119.1|WP_002456320.1|775917_777219_-|hypothetical-protein
MKQFLNITQRKFIEWLIILSIFIVSIPNKWTLMISIALSLLLLKRGALGVVQLIILYMLRSQIYTPYDTQEMAHYIVSMKYILIYVIGVFFLFKYVKHWIRNEMILRFIKSTMILMLLYIIMSLVVSNDPIESILKLLNFFIPLILIVMYVSLIKKIKNLINWINQFITLVIAFTFLFIVIAPKSYLIDEESLRSVFKDAHSFAVILAMGLVLYMVTIIKQQDYDVFNLLLLNIGMIELYLSNSRHIFISVILCLMLLLPLSHMKKRIKHPIIGAMILMTIAIINQPYIYHLFIKLILKGKNSQEVFMPSDMNIKAIDYALTEHPFLGSGFGIPMIKASSEIQYFNVATSNIIFGMIIFTGIIGLTLCTIYMLHMVLLVTFPMSITILLFLITIFVNMDYIILFDSVGLGILCYIFWGIYLKEGMYQYNNGQW
>NZ_CP014119.1|WP_002437864.1|777494_778310_-|phosphonate-ABC-transporter,-permease-protein-PhnE
MNTLDSKYELKSKKHRQRIIKNWVIVTVVAAIIIWAFAGIPGLELKSKSIEILKSIFYGLFHPDLSYIYIPDGEDLLRGLLETFAIAVIGTFIASIICIPFAFLGAKNMMKLRPVTGISKFILSIIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGKLFVEDIESLDFSAVESLKASGANKMKTLMFAVIPQILPSFISLILYRFELNLRSASILGLIGAGGIGTPLIFALQTRSWDRVGMILIGLIAMVALVDLISGAVRKRIV
>NZ_CP014119.1|WP_002437862.1|778306_779059_-|phosphonate-ABC-transporter,-permease-protein-PhnE
MSLKTSFSIILITGLIIWSFIYTGFSIGDLMIGLPQIGVFFKQMIPPDWGYLDHITQPMLDTIRMAIVGTFLGSIVSIPIALLCASNIVQTKWIAIPSRFVLNIVRTIPDLLLAAVFVAIFGIGQIPGVLALFVLTICIIGKLLYESLETIDPGPMEAMTAVGANKVKWIAFGVVPQAISSFMSYVLFAFEINIRASAVLGLVGAGGIGLFYDQTLGLFQYKKTTMIILFTLIIVVIIDYVSSKVREKLA
>NZ_CP014119.1|WP_001832011.1|779108_779882_-|phosphonate-ABC-transporter-ATP-binding-protein
MSQIEFKDVSKVYPNGHVGLKDINLNIEKGDFAVIVGLSGAGKSTLLRSVNRLHDISKGDITIEGQSITKARGKKLLEMRRSIGMIFQHFNLVKRSTVLRNVLSGRVGYHPTWKMILGLFPKEDKVKALDALERVNILDKYDQRSDQLSGGQQQRISIARALCQEPTIILADEPVASLDPLTTKQVMDDLKKINEELGITILINLHFVDLAKEYGSRIIGLRAGELVYDGPASEANDEVFNHIYGRSIKDDEKLGVE
>NZ_CP014119.1|WP_001832012.1|779995_780952_-|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein
MKNLKFLVVLVLSVVIFAAACGNSSSLDNNKSSDSGSDSKSGSYTPKELTVQFVPSQNADTLEAKAKPLEKLLSDKLGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLKAERYDVNEDGSPSKKLVDDYKSEILVKKDSGINSLKDLKGKKIALQDVTSTAGYTFPLVTLKKEAGIDATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARTVVKKDQPNVFKDTKILKLTKPIPNDTISVRPDMDKKFQDKLKKAFKEISKTKKGHKIISEVYSHEGYVDTKDSDFDIVRQYEKAVHDMK
>NZ_CP014119.1|WP_002456758.1|781186_782737_+|hypothetical-protein
MKIFKTLSSILVTSVLSVTVIPSTFASTESTATNQTQQTVLFDNSHAQTAGAADWVIDGAFSDYADSMRKQGYQVKELEGESNISDQSLQQARVLVIPEANNPFKENEQKAIINFVKNGGSVIFISDHYNADRNLNRIDSSESMNGYRRGAYENMTKDMNNEEKNSNVMHNVKSSDWLSQNFGVRFRYNALGDINTQNIVSSKDSFGITKGVQSVSMHAGSTLAITDPNKAKGIIYMPEHLTHSQKWSHAVDQGIYNGGGINEGPYVAISKIGKGKAAFIGDSSLVEDRSPKYLREDNGKPKKTYDGFKEQDNGKLLNNLTTWLGKKESQSSMKDMGIKLDNKTPLLNFEQPENSIEPQKEPWTNPIEGYKWYDRSTFKTGSYGSNQRGADDGVDDKSSSHQNQNAKVELTLPQNIQPHHPFQFTIKLTGYEPNSTISDVRVGLYKDGGKQIGSFSSNRNQFNTLGYSPGQSIKANGAGEASFTLTAKVTDEIKDANIRVKQGKKILLTQKMNENF
>NZ_CP014119.1|WP_001832016.1|782833_784369_+|bifunctional-metallophosphatase/5'-nucleotidase
MSQIAFYILSDVHGFIFPTDFSSREKDLPMGLLKANHLIEQDCVHYDGSVKIDNGDFLQGSPLCNYLVSKLKSSLPLTSIYNRLGFDFGIVGNHEFNYDLPYLKQAINQLHYPVLCANIIENTQPFTGQGIHYFKVNDLTIGTIGLTTQYIPHWEQPDYIKTLTFNSAVHILKSELPTLREKSDIVVVSYHGGFERDLDSGLPTEALTGENEGYDILSQFSDSIDVLITGHQHRDIATIKNQTAIIQPGSKGTKVGKIVIEYTHDKKVLIKECNLMNVNNNTSFKPNVEDIALRNQLEDWLDTQIAELPYAMRINNSFEARKSPHAFVNLLNYILLEKSGADIACTALFDSANGFDEKITMRDIINNYPFPNTFKVIELSGKDIKLAIERSASYFDIVNHKITVNKEFLEPKPQHFNYDIFAGIQYTIHVSHPYGERVSDLLINDAPIQSDQIYTICVNNYRAVGGGNYDMYVNKPVIKDIQIEGAQLLIDYLSHNDLSQIPQVIDFNVVK
>NZ_CP014119.1|WP_002437853.1|784468_785644_-|MFS-transporter
MKDNKMLFIIFMIGTFTVGMAEYVVTGLLTQIADDMKVSISSAGLLISVYAISVALIGPLMRIITLKVHAHRLLPILVAIFIISNLVGMLAPNFNVLLLSRLMSAAMHAPFFGVCMSVAATVAPPAKKTQAIALVQAGLTIAVMLGVPFGSFLGGFANWRVVFGFMIVLAIITMLGMIKFVPNVSLSAEANISKELTVFKNPHILIVIAIIVFGYSGVFTTYTFMEPMIRDFSPFKIVGLTVCLFMFGLGGVIGNLITGNVPEDKLTKNLYLTFLLLFVTIILFVTVIQNSILALIICFLFGFGTFGTTPLLNSKIILSAKEAPLLASTLAASIFNVANFLGAIIGSILLSIGLPYIQITLISGGIIVLGMLLNLVNQLYEKKHITFNEYS
>NZ_CP014119.1|WP_104832450.1|786476_787655_-|IS110-family-transposase
MSKRSSVVAHYKNGKFQKEFFIQNNKNGYNYLLKYLNDLDHPQLIFESTGIYSRGMERFCCVNQINYIQMNPLEAKFKTSALRSWKTDQADAHKLACLGPTLKQTDSLPIHELIFFELRERVRFHLEIENEQNRLKFQILELLHQTFPGLERLFSSRYSIIALNIAEIFTHPDMVLDIDKEVLITHIFNSTDKGMSMDKATKYALQLRVIAQESYPNVDRHSFLVEKLRLLIQQLKQSIHHLKQLDDAMIQLAQQLDYFENIHSIPGIGKLSTAMIIGEIGDIKRFKSNKQLNAFVGIDIKRYQSGHTHCRDTINKRGNKKARKLLFWVIMNIIRGQHHYDNHVVDYYYKLRKQPNEKPHKTAIIACINRLLKTIHYLVMNHKLYDYQMSPH
>NZ_CP014119.1|WP_002437845.1|788155_790222_-|YSIRK-domain-containing-triacylglycerol-lipase-GehC
MKTRQNKYSIRKFSVGASSILIAALLFMGGGSAQAAEQQQDKGTVENSTTQSIGDGNEKLSEQQSTQNKNVNEKSNVNSITENESLHNETPKNEDWIQQQKDSQNDNKSESVVEQNKENEAFVQNHSEEKPQQEQVELEKHASENNQTLHSKAAQSNEDVKTKPSQLDNTAAKQEDSQKENLSKQDTQSSKTTDLLRATAQNQSKDSQSTEEINKEVNNDTQQVTAKNDDAKVESFNLNSKEEPLKVDKQANPTTDKDKSSKNDKGSQDGLANLESNAVATTNKQSKQQVSEKNEDQTNKSAKQKQYKNNDPIILVHGFNGFTDDINPSVLTHYWGGDKMNIRQDLEENGYEAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGVYKDWKPGQKIHLVGHSMGGQTIRQLEELLRHGNPEEVEYQKQHGGEISPLYQGGHDNMVSSITTLGTPHNGTHASDLLGNEAIVRQLAYDVGKMYGNKDSRVDFGLEHWGLKQKPNESYIQYVKRVQNSKLWKSKDSGLHDLTRDGATDLNRKTSLNPNIVYKTYTGESTHKTLAGKQKADLNMFLPFTITGNLIGKAKEKEWRENDGLVSVISSQHPFNQKYVEATDKNQKGVWQVTPTKHDWDHVDFVGQDSTDTKRTRDELQQFWHGLAEDLVQSEQLTSTNK

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Crispr_ID: NZ_CP014119_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_4

959268-959592

TypeIII

Consensus_repeat	Method
TGTTCTCGTCCCCTTTTCGGCGGGGTGGTTAGCGAAT	CRISPRCasFinder

4 spacers

cas6,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1

The CRISPR arrays of NZ_CP014119_4

>merge|NZ_CP014119|4|959268-959592|CRISPRCasFinder
AATACTCGTCCCCTTTTTTGCGGAGTGGTTATCGAATTAGAGATATCGTATACATTAATTCGTGGCTTATTGAGTTCTCGTCCCCTTTTATGCGGGGTGTTATCGAATTTCAACGTGAAACTTATATTGAATGGATAGAAATGAGTTCTCGTCCCCTTTTATGCGGGGTGGTTATCGAATTTAGATGTGCCGGTGTGGGTTTGGATAGTTTTAATCTGTTCTCGTCCCCTTTTCGGCGGGGTGGTTAGCGAATTTGAATTTGCTACGGAAAACGATGAGCTAGTTGCTTGTTCTCGTCCCCTTTTCGGCGGGGTGGTTAGCGAAT

>NZ_CP014119|4|4|959268-959592|CRISPRCasFinder
AATACTCGTCCCCTTTTTTGCGGAGTGGTTATCGAAT	TAGAGATATCGTATACATTAATTCGTGGCTTATTG
AGTTCTCGTCCCCTTTTATGCGGGGTGTTATCGAATT	TCAACGTGAAACTTATATTGAATGGATAGAAATG
AGTTCTCGTCCCCTTTTATGCGGGGTGGTTATCGAAT	TTAGATGTGCCGGTGTGGGTTTGGATAGTTTTAATC
TGTTCTCGTCCCCTTTTCGGCGGGGTGGTTAGCGAAT	TTGAATTTGCTACGGAAAACGATGAGCTAGTTGCT
TGTTCTCGTCCCCTTTTCGGCGGGGTGGTTAGCGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_002469424.1\|953721_954843_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP014119.1\|WP_002470061.1\|971412_972381_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP014119.1\|WP_002469399.1\|967026_967332_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_CP014119.1\|WP_002469394.1\|953144_953756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002469401.1\|963666_964311_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_CP014119.1\|WP_002469423.1\|951319_952411_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP014119.1\|WP_002469397.1\|959723_960458_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP014119.1\|WP_002469412.1\|962747_963656_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP014119.1\|WP_002469393.1\|964740_967014_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP014119.1\|WP_002469422.1\|947995_948481_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002470063.1\|961722_962745_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP014119.1\|WP_002469387.1\|949024_950386_-\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_CP014119.1\|WP_002469408.1\|957906_958764_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_CP014119.1\|WP_002469411.1\|960454_961723_-\|type-III-A-CRISPR-associated-protein-Csm6	csm6	cd09699_csm6_CAS-III-A	gnl\|CDD\|131720
NZ_CP014119.1\|WP_089424035.1\|956044_956503_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP014119.1\|WP_002469413.1\|967331_968237_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP014119.1\|WP_002505142.1\|956699_957473_-\|tandem-type-lipoprotein	unknown	unknown	gnl\|CDD\|367972
NZ_CP014119.1\|WP_002470067.1\|964312_964738_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|273844
NZ_CP014119.1\|WP_002458482.1\|952398_953064_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP014119.1\|WP_002469405.1\|954817_955723_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_002470061.1\|971412_972381_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	3.23628e-07
NZ_CP014119.1\|WP_002469399.1\|967026_967332_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	9.63007e-26
NZ_CP014119.1\|WP_002469401.1\|963666_964311_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.35084e-106
NZ_CP014119.1\|WP_002469423.1\|951319_952411_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.77551e-15
NZ_CP014119.1\|WP_002469397.1\|959723_960458_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.05435e-16
NZ_CP014119.1\|WP_002469412.1\|962747_963656_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.87464e-38
NZ_CP014119.1\|WP_002469393.1\|964740_967014_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP014119.1\|WP_002470063.1\|961722_962745_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	3.88064e-17
NZ_CP014119.1\|WP_002469387.1\|949024_950386_-\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.66698e-112
NZ_CP014119.1\|WP_002469408.1\|957906_958764_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	4.72494e-46
NZ_CP014119.1\|WP_002469411.1\|960454_961723_-\|type-III-A-CRISPR-associated-protein-Csm6	gnl\|CDD\|131720	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.	1.49164e-175
NZ_CP014119.1\|WP_089424035.1\|956044_956503_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	5.34933e-17
NZ_CP014119.1\|WP_002469413.1\|967331_968237_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.17186e-120
NZ_CP014119.1\|WP_002505142.1\|956699_957473_-\|tandem-type-lipoprotein	gnl\|CDD\|367972	pfam04507, DUF576, Csa1 family. This family contains several uncharacterized staphylococcal proteins. These proteins have been called conserved staphylococcal antigens (Csa).	2.1372e-124
NZ_CP014119.1\|WP_002470067.1\|964312_964738_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|273844	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2. These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This model represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2.	3.92956e-21
NZ_CP014119.1\|WP_002458482.1\|952398_953064_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.61106e-62
NZ_CP014119.1\|WP_002469405.1\|954817_955723_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.66913e-118

>NZ_CP014119.1|WP_002469408.1|957906_958764_-|GIY-YIG-nuclease-family-protein
MIELNKFIKVPDLNKTKIKFNMNAGNVEIRAWDLLFKEDETEWEQINAWKTKHPNNNLNHADYLLAFAQYYPYGPEYFIFGGLYKIKKIEPEVFDEVGYELTLMDDYKEYRKRLIVKLKKPIGRDLYNRLYKNIQDTLEPEVYEIAPNTKLGHFPGYQNVTLSHPQMQQIISRNEPSWKQALMNVKGVYVITDLSNGKLYIGSASGNTDGIWQRWSDYANIENLTGGNKLLNEIKLDKGKDYIVNNFQYSILEIFDTKTKADIIINRENYWKNVFCTRKYGMNYN
>NZ_CP014119.1|WP_002505142.1|956699_957473_-|tandem-type-lipoprotein
MKHSKKLLLCISFLLITIFIGGCGFINKDDSKETEIKKSFNKKLSMYPIKNLEDLYDKEGYRDEEFNKNDKGTWVITSSINIQQKGEGLKTRRMVLFMNRNTRTSKGKFMITEVKEKSDIGFQTRKKEYPVKLIDNKFIPSKQIKDEKIKKEIENFKFFSQYGNFKDLKDYKDGEVSYNPNAPNYSAKYQLSNNDYNVKQIRKRYDIPTEQAPKLLLKGTGDLKGSSTGSKNIEFTFVEKKGENIYFTDSVEYTPSE
>NZ_CP014119.1|WP_089424035.1|956044_956503_+|radical-SAM-protein
MKYKYVSNVIDNLKRLFNELLEIRYYVDEEKTHQENNLSVTFTLTNKCNLSCSHCALSASPLSQDILSTNDVKYAIDKIIDVNPNTLILTGGEPFIRKDILEIISYIRTNFKNKLVIMTNGMLIRKNSFHFKKRIGYVNKCEMASLRVHMAS
>NZ_CP014119.1|WP_002469405.1|954817_955723_-|ABC-transporter-ATP-binding-protein
MNEIVIKGLSKSYDGKKDALNSLDLVIPNGMFGILGRNGSGKSTLMNIIATILQPSKGTVTINGIEIKNSQKIRQMIGYLPQDFDFYPNMKVSEVLYYLGFLSKINQTDFDKYVDLILRKVNLIDYKNKKVKSLSGGMKKRLGIAQAILHDPKVIIVDEPTAGLDPEERVRLRNLLSDLAENKIVIISTHIVSDIESTCNRIAILDKGSLVYKGDIPSLIQQSDDHIYEINLSPSELESFRENDLFITKTQEIENKLKVRFISETKVANAKKVKADFEDAYMYFLKKQQGGLNHASIYNGI
>NZ_CP014119.1|WP_002469424.1|953721_954843_-|ABC-transporter-permease
MRLFIMEFKHLMVSKTFLFYCLLIIIFTVLNCQQVLKHPINSDVYQPQNMIMYSTDKNIIMSNEIKELKNEVHQNNFKTYQFGFLKQKKLNDQQISKIKKLISKMEKTNNFHQFKNYSNSVSHVVGWGSQYSKNNISLFGIKNMSKSKYVKEKNIIKNKEYYYGAYSRYFSDIIGVVLGILPFFLGAQMILQDKKSNAIKTIHSKSISSYQLISTRVFTILVLAYLPVLLVSIYFVTCLSMIHQISMFSLFIFYKILILWTLPTLIFTIAMGLFVTIILNSYLGVMIQIVIWFINLNIGSRAIEGCYSSLLIPRHNTLFNAVFFYNHFNQILANRFTYFGLGLLLILLSTYIFDLKRRGVGFNGKIFTNRYQN
>NZ_CP014119.1|WP_002469394.1|953144_953756_-|hypothetical-protein
MAKFLLIDIKTNLVKLYIGILILLFGGMFIFGVSNLNHESVTQYIELIFTILGILLFTAIYSVDQNKKSKLTIGAKCHDYQFVFMLRLVITIIYILFLITINLFIFHLFNSNIIVLRDMFIALTSTLFIGSICLLTSILSGNTLNGLMFGLVYFLFCLGFRNLGFMYLFSETFNFPFYIKIFQFLLGIVLLIFSYTIIKKVQN
>NZ_CP014119.1|WP_002458482.1|952398_953064_-|response-regulator-transcription-factor
MYNIMIVDDEEKIVSFIKESLYLEGFNTIVAYNGRDVLKQIDDKIDLIILDIKMPYIDGFEVAQSLKESNIPIIFLTAKDNLDTRLKCFSLGAKDYLPKPFYMEELIIRIKNVLNQSHSQSLTPNIKKTKELIIYYDTYRIDVNNMTIDITKKEFEIIKLLSLNPQYYFSKEQIYDSINLNKTGNTQVVAEHIRKIRKKLSCYSRFEYIDTKWGVGYKWLE
>NZ_CP014119.1|WP_002469423.1|951319_952411_-|HAMP-domain-containing-histidine-kinase
MARVESLKRKMTRLIIAIIVVSVGLVFLLQILLNVLEFSNFGKSLYTNFWKQPHYIFSFTSACISIMTPLLIIYVFTQFFYKKYITTSINYLNDTIQGLKNNRTDVEYKKMSISEFNKVIQEVEHIHTYLANSIKDQLSIQNNFKRKLEILEHDLKTPLTVLQGHIELLRKINCSNLSQEEIHFKINREADIALQSIDRINNQLQIHIKNINLLPNHSDTIHVDKVIKIIKESYNQQYILKERELIIDVDHDFPYYTLSINNQVLYHVIDNLINNALKYAEKQISIKFEVINDHLLNFTITNDGRIFTEDELNSAKEWGTKGKESNGSGIGLYFANIVLQQYNSELILENENNHAKVSFNIPV
>NZ_CP014119.1|WP_002469387.1|949024_950386_-|SLC45-family-MFS-transporter
MNDTDRTHKENKLEQDITLPYLKKAVIFSITFGFFGVNMAFALQSAMMGRIFQTLGANPNNLGWFFILPPLVGMIVQPLIGYYSDRTWTRFGRRMPYLLIAGPIGAIVLVLLPNAGSFNFGYASLMALSFGAVMTLLMDLTSNACMQPYKMIIGDMVNEKQKDMAWSWQQIFSNLGGIIATVLPFLLTMLGMSNVAPKGEVPMTVKLAYYIAAAVLLIASIWTVISVREYEPKTYNYYHGINENNRNNKLSLLQLLKKAPKQFWQISVVQFFNWFALMYLWTYSTGAIAKNVWNVTDPSSAGYQAAGNWYGVLYCIQFLSSVIFGFVIARSKPSQRKFWYSFGLVFGGIGLISIFFIHNQWLLIFSFVLIGINNLTMNTQPFTLLTEAIDGENSGAYLGLFNTSICLPQIVASIVSFGLYPLLGSSMPAMLLLAGIMMLLGAVSVKFINAKFE
>NZ_CP014119.1|WP_002469422.1|947995_948481_-|hypothetical-protein
MKKVSKFILASSLILDFSVTPELFNVTQAHAQESVKPYYNYSGYTAYQSNFILDKNFKTSLKADNFKINGYKITQNESAKNDKDVYDQTYYGVSNHKANGVFFSLDGKSVSEKELLNHYGEPKSTSTSAWGKEYTYKIGNKDVRFYVNRNGYVIKGQIISE
>NZ_CP014119.1|WP_002469397.1|959723_960458_-|CRISPR-associated-endoribonuclease-Cas6
MINKITVELDLPDNIRFQYLGSILHGVLMDYLPNDIADQLHHEFAYSPLKQRIYYKSKKVIWEIVCMSDNLFKEIVKLFSSKNSLLLKYYQTNIDIQSFQIEKINVQNIMNQLLQTEDLNRYVRLNIQTPMSFKYQSSYMIFPDVKRFFRSIMIQFDAFFEEYKMYDKETLDFLMKNVNIVDYKLKSTRFNLEKVKIPSFTGEMVFKIKGPLPFLQLTHFLLKFGEFSGSGMKTSLGMGKYSII
>NZ_CP014119.1|WP_002469411.1|960454_961723_-|type-III-A-CRISPR-associated-protein-Csm6
MKVLFSPIGNSDPWRNDRDGAMLHIVRHYNLDKVVLYFTRTIWEGNENRKGHKIYEWEKIIQTVSPNTEVEIIIENVDNAQDYDVFKEKFHKYLKIIEDSYEDCEIILNVTSGTPQMESTLCLEYIVYPENKKCIQVSTPTKDSNAGIEYSNPKDKVEEFEIVNEVEKKSEKRCKEINILSFREAMIRSQILGLIDNYDYEGALNLVSNQKSFRNGKLLRKKLLSLTKQIKTHEVFPEINEKYRDDALKKSLFHYLLLYMRYNRHDVAETLIRVKSIAEFILKTYIEIHWPTLIIEKDDKPYLNDEDNLSFVDKYKLLLGKRNQNFDVSRILGLPAFIDILTILEPNSKLLKEVNAVNDINGLRNSIAHNLDTLNLDKNKNYKKIMLSVEAIKNMLHISFPEIEEEDYNYFKEKNKEFKELL
>NZ_CP014119.1|WP_002470063.1|961722_962745_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MTIKNYEVVVKTLGPVHIGSGQVMKKQDYIYDFYNSKVYMINGNKLVKFLKRKNLLHTYQNFLRYPPKNPRENGLKDYLDAQNVKQSEWEAFVSYSEKVNQGKKYGNVRPKPLNDLHLMVRDGQNKVYLPGSSIKGAIKTTLVSKYNNEKNKDIYSKIKVSDSKPIDESNLAIYQKIDINKSEKPMPLYRECVDVNTEIKFKLTIEDEIYSINEIEQSIRDFYKNYYDKWLVGFKETKGGRRFALEGGIPDVLNQNILFLGAGTGFVSKTTHYQLKNRKQAKQDSFEILTKKFRGTYGKMKEIPSNVPVALKGTTNQSRHTSYQQGMCKVSFQELNNEVL
>NZ_CP014119.1|WP_002469412.1|962747_963656_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MATKVFKLSFKTPVHFGKKRLSDGEMTITADTLFSALFIETLQLGKDTDWLLNDLIISDTFPYENELYYLPKPLIKIDSKEEDNHKAFKKLKYVPVHHYNQYLNGELSAEDATDLNDIFNIGYFSLQTKVSLIAQETDSSADSEPYSVGTFTFEPEAGLYFIAKGSEETLDHLNNIMTALQYSGLGGKRNAGYGQFEYEIINNQQLSKLLNQNGKHSILLSTAMAKKEEIESALKEARYILTKRSGFIQSTNYSEMLVKKSDFYSFSSGSVFKNIFDGDIFNVGHNGKHPVYRYAKPLWLEV
>NZ_CP014119.1|WP_002469401.1|963666_964311_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYSKIKISGTIEVVTGLHIGGGGESSMIGAIDSPVVRDLQTKLPIIPGSSIKGKMRSLLAKHFGLKMKQESHNQDDERVLRLFGSSEKGNIQRARLQISDAFFSEKTKEHFAQNDIAYTETKFENTINRLTAVANPRQIERVTRGSEFDYVFIYNVDEESQVEDDFENIEKAIHLLENDYLGGGGTRGNGRIQFKDTNIETVVGEYDSTNLKIK
>NZ_CP014119.1|WP_002470067.1|964312_964738_-|type-III-A-CRISPR-associated-protein-Csm2
MILAKTKSGKTIDLTFAHEVVKSNVKNVKDRKGKEKQILFNGLTTSKLRNLMEQVNRLYTIAFNSNEDQLNEEFIDELEYLKIKFYYEAGREKSVDEFLKKTLMFPIIDRVIKKESKKFFLDYCKYFEALVAYAKYYQKED
>NZ_CP014119.1|WP_002469393.1|964740_967014_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNKKNILMYGSLLHDIGKIIYRSGDHTFSRGTHSKLGHQFLSQFSEFKDNEVLDNVAYHHYKELSKANLDNDNTAYITYIADNIASGIDRRDIIEEGDEEYEKQLFNFDKYTPLYSVFNIVNSEKLKQTNGKFKFSNESNIEYPKTENIQYSSGNYTTLMKDMSHDLEHKLSIKEGTFPSLLQWTESLWQYVPSSTNKNQLIDISLYDHSRITCAIASCIFDYLNENNIHNYKDELFSKYENTKSFYQKEAFLLLSMDMSGIQDFIYNISGSKALKSLRSRSFYLELMLEVIVDQLLERLELTRANLLYTGGGHAYLLVSNTDKLKKKITQFNNELKKWFMSEFTTDLSLSMAFEKCSGDDLMNTSGNYRTIWRNVSSKLSDIKAHKYSAEDILKLNHFHSYGDRECKECLRSDIDINDDGLCSICEGIINISNDLRDKSFFVLSETGKLKMPFNKFISVIDYEEAEMLVQNNNQVRIYSKNKPYIGIGISTNLWMCDYDYASQNQDMREKGIGSYVDREEGVKRLGVVRADIDNLGATFISGIPEKYNSISRTATLSRQLSLFFKYELNHLLENYQITAIYSGGDDLFLIGAWDDIIEASIYINDKFKEFTLDKLTLSAGVGMFSGKYPVSKMAFETGRLEEAAKTGEKNQISLWLQEKVYNWDEFKKNILEEKLLVLQQGFSQTDEHGKAFIYKMLALLRNNEAINIARLAYLLARSKMNEDFTSKIFNWAQNDKDKNQLITALEYYIYQIREAD
>NZ_CP014119.1|WP_002469399.1|967026_967332_-|CRISPR-associated-endonuclease-Cas2
MYLLVSFDLPRDTKLERRIASKYRLRLIELGFSMKQFSLYERYVSNVQKKDKILEILKQEIPDTGSITLYILPDEVNSNQITILGKEVKLAVNKEPKLIFI
>NZ_CP014119.1|WP_002469413.1|967331_968237_-|type-II-CRISPR-associated-endonuclease-Cas1
MKDVIYVENHYFVTAKENSIKFRNVIDKSEKFYLFEEIEAIIFDHYKSYFSHKLVIKCIENDIAIIFCDKKHSPVTQLISSYGMVNRLKRIQSQFQLSGRTKDRIWKKIVVNKIFNQTRCLENNLHNENVKLMLGFAKEVSSGDKSNKEAHAARIYFKDLFGKQFKRGRYNDVINSGLNYGYSILRSFINKELAIHGFEMSLGIKHQSKENPFNLADDIIEVFRPFVDNIVYEIVFKKNIDTFDINEKKLLLNVLYERCIIDKKVVRLLDSVKIVIQSLIRCYEENTPTYLLLPKMIEVGN
>NZ_CP014119.1|WP_002470061.1|971412_972381_-|zinc-ribbon-domain-containing-protein
MKYCANCGYKINNNQSFCNNCGAKLHDFQSNQQSNHNKIDKVRGVNNRYTYRYRDNNQHKRSGFGKVLIAILAVVILGLLVSGLYFAYHQFKSHNSSNGTTQSQSSNTSDDNAHGAQIDIFSDTFDQSYIKAPSKDGYAEIYNGMSRSDVETKYGKSNGTIYLQGSTYEKYGDLAVMYDEYDDVSQVIVTPSNITEDDYIEHYGEPDDREGNIFIYDAYKDNDFSVLVTIKDGMVLAIENVDQLPSNSSDDSDSNEVSSKSEARAIANDVLDSSDWIHSVDEGEFSYRVNYGRENEDRAHRAIIVEKNDSSTSEWDGDEWDY

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Crispr_ID: NZ_CP014119_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_5

968313-969135

TypeIII

Consensus_repeat	Method
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	CRISPRCasFinder
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	CRT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	PILER-CR

11 spacers

cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6

The CRISPR arrays of NZ_CP014119_5

>merge|NZ_CP014119|5|968313-969135|CRISPRCasFinder,CRT,PILER-CR
CACTCTGCCCCCTTTTCTTCGGGGTAGTTATCGATCCTTGTAAACTTACCAAACCACATGGCTGACGATGTATTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCCAAGGTCCATTAGTAGGTCGTGAAAATGAAGTTAAGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCACTGAAGAAAGATGTTATTAATTGGGCTATTGAAGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCTAGTAAGTGATTTACATTATGACGGCATAGACGAACAGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCATAAAAAAATTATTAAAAAGGATATGATTGAAATGGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCTACAGAAATGATTTAGGGGGCACAGGTTGGCACCGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCATCTGGAAGAGTGTTATCAATTTCAGTTACCTTAAAGGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCGCGAAAAGAATTTAAAATAATTGTTGGCTTTCAGAAGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCAGTCAATATAAAGACAATACTTTTTACGCTTATATTGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCTGTTGGTTGGTATGTAATTGAGAGTGTAGGTTTCTTGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCAAGTATATATAATGTAATCATTTTTGTTACCACCTTGTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC

>NZ_CP014119|5|5|968313-969135|CRISPRCasFinder
CACTCTGCCCCCTTTTCTTCGGGGTAGTTATCGATC	CTTGTAAACTTACCAAACCACATGGCTGACGATGT
ATTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	CAAGGTCCATTAGTAGGTCGTGAAAATGAAGTTAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ACTGAAGAAAGATGTTATTAATTGGGCTATTGAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TAGTAAGTGATTTACATTATGACGGCATAGACGAACA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ATAAAAAAATTATTAAAAAGGATATGATTGAAATG
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TACAGAAATGATTTAGGGGGCACAGGTTGGCACC
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ATCTGGAAGAGTGTTATCAATTTCAGTTACCTTAAAG
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	GCGAAAAGAATTTAAAATAATTGTTGGCTTTCAGAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	AGTCAATATAAAGACAATACTTTTTACGCTTATATT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TGTTGGTTGGTATGTAATTGAGAGTGTAGGTTTCTT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	AAGTATATATAATGTAATCATTTTTGTTACCACCTT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC

>NZ_CP014119|5|1|968313-969135|CRT
CACTCTGCCCCCTTTTCTTCGGGGTAGTTATCGATC	CTTGTAAACTTACCAAACCACATGGCTGACGATGT
ATTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	CAAGGTCCATTAGTAGGTCGTGAAAATGAAGTTAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ACTGAAGAAAGATGTTATTAATTGGGCTATTGAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TAGTAAGTGATTTACATTATGACGGCATAGACGAACA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ATAAAAAAATTATTAAAAAGGATATGATTGAAATG
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TACAGAAATGATTTAGGGGGCACAGGTTGGCACC
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	ATCTGGAAGAGTGTTATCAATTTCAGTTACCTTAAAG
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	GCGAAAAGAATTTAAAATAATTGTTGGCTTTCAGAA
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	AGTCAATATAAAGACAATACTTTTTACGCTTATATT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	TGTTGGTTGGTATGTAATTGAGAGTGTAGGTTTCTT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC	AAGTATATATAATGTAATCATTTTTGTTACCACCTT
GTTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC

>NZ_CP014119|5|1|968385-969135|PILER-CR
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCC	AAGGTCCATTAGTAGGTCGTGAAAATGAAGTTAAG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCA	CTGAAGAAAGATGTTATTAATTGGGCTATTGAAG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCT	AGTAAGTGATTTACATTATGACGGCATAGACGAACAG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCA	TAAAAAAATTATTAAAAAGGATATGATTGAAATGG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCT	ACAGAAATGATTTAGGGGGCACAGGTTGGCACCG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCA	TCTGGAAGAGTGTTATCAATTTCAGTTACCTTAAAGG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCG	CGAAAAGAATTTAAAATAATTGTTGGCTTTCAGAAG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCA	GTCAATATAAAGACAATACTTTTTACGCTTATATTG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCT	GTTGGTTGGTATGTAATTGAGAGTGTAGGTTTCTTG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATCA	AGTATATATAATGTAATCATTTTTGTTACCACCTTG
TTCTCGTCCCCTTTTCTTCGGGGTGGTTATCGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_002470061.1\|971412_972381_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP014119.1\|WP_002469398.1\|981387_982155_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP014119.1\|WP_002470062.1\|973686_975474_+\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_CP014119.1\|WP_002469402.1\|982121_982889_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP014119.1\|WP_002470063.1\|961722_962745_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_CP014119.1\|WP_002469397.1\|959723_960458_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP014119.1\|WP_002469412.1\|962747_963656_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP014119.1\|WP_002469393.1\|964740_967014_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP014119.1\|WP_002505430.1\|976771_979801_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_CP014119.1\|WP_002469410.1\|980759_981395_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224049
NZ_CP014119.1\|WP_002469401.1\|963666_964311_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_CP014119.1\|WP_002467620.1\|982888_983845_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP014119.1\|WP_002470059.1\|979973_980180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002469408.1\|957906_958764_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_CP014119.1\|WP_002469411.1\|960454_961723_-\|type-III-A-CRISPR-associated-protein-Csm6	csm6	cd09699_csm6_CAS-III-A	gnl\|CDD\|131720
NZ_CP014119.1\|WP_002469399.1\|967026_967332_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_CP014119.1\|WP_002469413.1\|967331_968237_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP014119.1\|WP_002470060.1\|973322_973544_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002470067.1\|964312_964738_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|273844
NZ_CP014119.1\|WP_002469417.1\|983847_985401_-\|nickel-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173854

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_002470061.1\|971412_972381_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	3.23628e-07
NZ_CP014119.1\|WP_002469398.1\|981387_982155_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.15728e-57
NZ_CP014119.1\|WP_002470062.1\|973686_975474_+\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	3.37964e-60
NZ_CP014119.1\|WP_002469402.1\|982121_982889_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.20161e-56
NZ_CP014119.1\|WP_002470063.1\|961722_962745_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	3.88064e-17
NZ_CP014119.1\|WP_002469397.1\|959723_960458_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.05435e-16
NZ_CP014119.1\|WP_002469412.1\|962747_963656_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.87464e-38
NZ_CP014119.1\|WP_002469393.1\|964740_967014_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP014119.1\|WP_002505430.1\|976771_979801_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	2.92451e-80
NZ_CP014119.1\|WP_002469410.1\|980759_981395_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.15384e-45
NZ_CP014119.1\|WP_002469401.1\|963666_964311_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.35084e-106
NZ_CP014119.1\|WP_002467620.1\|982888_983845_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.3251e-61
NZ_CP014119.1\|WP_002469408.1\|957906_958764_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	4.72494e-46
NZ_CP014119.1\|WP_002469411.1\|960454_961723_-\|type-III-A-CRISPR-associated-protein-Csm6	gnl\|CDD\|131720	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.	1.49164e-175
NZ_CP014119.1\|WP_002469399.1\|967026_967332_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	9.63007e-26
NZ_CP014119.1\|WP_002469413.1\|967331_968237_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.17186e-120
NZ_CP014119.1\|WP_002470067.1\|964312_964738_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|273844	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2. These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This model represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2.	3.92956e-21
NZ_CP014119.1\|WP_002469417.1\|983847_985401_-\|nickel-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173854	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel transport system, which functions in the import of nickel and in the control of chemotactic response away from nickel. The ATP-binding cassette (ABC) type nickel transport system is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, the initial nickel receptor. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.18554e-168

>NZ_CP014119.1|WP_002469413.1|967331_968237_-|type-II-CRISPR-associated-endonuclease-Cas1
MKDVIYVENHYFVTAKENSIKFRNVIDKSEKFYLFEEIEAIIFDHYKSYFSHKLVIKCIENDIAIIFCDKKHSPVTQLISSYGMVNRLKRIQSQFQLSGRTKDRIWKKIVVNKIFNQTRCLENNLHNENVKLMLGFAKEVSSGDKSNKEAHAARIYFKDLFGKQFKRGRYNDVINSGLNYGYSILRSFINKELAIHGFEMSLGIKHQSKENPFNLADDIIEVFRPFVDNIVYEIVFKKNIDTFDINEKKLLLNVLYERCIIDKKVVRLLDSVKIVIQSLIRCYEENTPTYLLLPKMIEVGN
>NZ_CP014119.1|WP_002469399.1|967026_967332_-|CRISPR-associated-endonuclease-Cas2
MYLLVSFDLPRDTKLERRIASKYRLRLIELGFSMKQFSLYERYVSNVQKKDKILEILKQEIPDTGSITLYILPDEVNSNQITILGKEVKLAVNKEPKLIFI
>NZ_CP014119.1|WP_002469393.1|964740_967014_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNKKNILMYGSLLHDIGKIIYRSGDHTFSRGTHSKLGHQFLSQFSEFKDNEVLDNVAYHHYKELSKANLDNDNTAYITYIADNIASGIDRRDIIEEGDEEYEKQLFNFDKYTPLYSVFNIVNSEKLKQTNGKFKFSNESNIEYPKTENIQYSSGNYTTLMKDMSHDLEHKLSIKEGTFPSLLQWTESLWQYVPSSTNKNQLIDISLYDHSRITCAIASCIFDYLNENNIHNYKDELFSKYENTKSFYQKEAFLLLSMDMSGIQDFIYNISGSKALKSLRSRSFYLELMLEVIVDQLLERLELTRANLLYTGGGHAYLLVSNTDKLKKKITQFNNELKKWFMSEFTTDLSLSMAFEKCSGDDLMNTSGNYRTIWRNVSSKLSDIKAHKYSAEDILKLNHFHSYGDRECKECLRSDIDINDDGLCSICEGIINISNDLRDKSFFVLSETGKLKMPFNKFISVIDYEEAEMLVQNNNQVRIYSKNKPYIGIGISTNLWMCDYDYASQNQDMREKGIGSYVDREEGVKRLGVVRADIDNLGATFISGIPEKYNSISRTATLSRQLSLFFKYELNHLLENYQITAIYSGGDDLFLIGAWDDIIEASIYINDKFKEFTLDKLTLSAGVGMFSGKYPVSKMAFETGRLEEAAKTGEKNQISLWLQEKVYNWDEFKKNILEEKLLVLQQGFSQTDEHGKAFIYKMLALLRNNEAINIARLAYLLARSKMNEDFTSKIFNWAQNDKDKNQLITALEYYIYQIREAD
>NZ_CP014119.1|WP_002470067.1|964312_964738_-|type-III-A-CRISPR-associated-protein-Csm2
MILAKTKSGKTIDLTFAHEVVKSNVKNVKDRKGKEKQILFNGLTTSKLRNLMEQVNRLYTIAFNSNEDQLNEEFIDELEYLKIKFYYEAGREKSVDEFLKKTLMFPIIDRVIKKESKKFFLDYCKYFEALVAYAKYYQKED
>NZ_CP014119.1|WP_002469401.1|963666_964311_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYSKIKISGTIEVVTGLHIGGGGESSMIGAIDSPVVRDLQTKLPIIPGSSIKGKMRSLLAKHFGLKMKQESHNQDDERVLRLFGSSEKGNIQRARLQISDAFFSEKTKEHFAQNDIAYTETKFENTINRLTAVANPRQIERVTRGSEFDYVFIYNVDEESQVEDDFENIEKAIHLLENDYLGGGGTRGNGRIQFKDTNIETVVGEYDSTNLKIK
>NZ_CP014119.1|WP_002469412.1|962747_963656_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MATKVFKLSFKTPVHFGKKRLSDGEMTITADTLFSALFIETLQLGKDTDWLLNDLIISDTFPYENELYYLPKPLIKIDSKEEDNHKAFKKLKYVPVHHYNQYLNGELSAEDATDLNDIFNIGYFSLQTKVSLIAQETDSSADSEPYSVGTFTFEPEAGLYFIAKGSEETLDHLNNIMTALQYSGLGGKRNAGYGQFEYEIINNQQLSKLLNQNGKHSILLSTAMAKKEEIESALKEARYILTKRSGFIQSTNYSEMLVKKSDFYSFSSGSVFKNIFDGDIFNVGHNGKHPVYRYAKPLWLEV
>NZ_CP014119.1|WP_002470063.1|961722_962745_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MTIKNYEVVVKTLGPVHIGSGQVMKKQDYIYDFYNSKVYMINGNKLVKFLKRKNLLHTYQNFLRYPPKNPRENGLKDYLDAQNVKQSEWEAFVSYSEKVNQGKKYGNVRPKPLNDLHLMVRDGQNKVYLPGSSIKGAIKTTLVSKYNNEKNKDIYSKIKVSDSKPIDESNLAIYQKIDINKSEKPMPLYRECVDVNTEIKFKLTIEDEIYSINEIEQSIRDFYKNYYDKWLVGFKETKGGRRFALEGGIPDVLNQNILFLGAGTGFVSKTTHYQLKNRKQAKQDSFEILTKKFRGTYGKMKEIPSNVPVALKGTTNQSRHTSYQQGMCKVSFQELNNEVL
>NZ_CP014119.1|WP_002469411.1|960454_961723_-|type-III-A-CRISPR-associated-protein-Csm6
MKVLFSPIGNSDPWRNDRDGAMLHIVRHYNLDKVVLYFTRTIWEGNENRKGHKIYEWEKIIQTVSPNTEVEIIIENVDNAQDYDVFKEKFHKYLKIIEDSYEDCEIILNVTSGTPQMESTLCLEYIVYPENKKCIQVSTPTKDSNAGIEYSNPKDKVEEFEIVNEVEKKSEKRCKEINILSFREAMIRSQILGLIDNYDYEGALNLVSNQKSFRNGKLLRKKLLSLTKQIKTHEVFPEINEKYRDDALKKSLFHYLLLYMRYNRHDVAETLIRVKSIAEFILKTYIEIHWPTLIIEKDDKPYLNDEDNLSFVDKYKLLLGKRNQNFDVSRILGLPAFIDILTILEPNSKLLKEVNAVNDINGLRNSIAHNLDTLNLDKNKNYKKIMLSVEAIKNMLHISFPEIEEEDYNYFKEKNKEFKELL
>NZ_CP014119.1|WP_002469397.1|959723_960458_-|CRISPR-associated-endoribonuclease-Cas6
MINKITVELDLPDNIRFQYLGSILHGVLMDYLPNDIADQLHHEFAYSPLKQRIYYKSKKVIWEIVCMSDNLFKEIVKLFSSKNSLLLKYYQTNIDIQSFQIEKINVQNIMNQLLQTEDLNRYVRLNIQTPMSFKYQSSYMIFPDVKRFFRSIMIQFDAFFEEYKMYDKETLDFLMKNVNIVDYKLKSTRFNLEKVKIPSFTGEMVFKIKGPLPFLQLTHFLLKFGEFSGSGMKTSLGMGKYSII
>NZ_CP014119.1|WP_002469408.1|957906_958764_-|GIY-YIG-nuclease-family-protein
MIELNKFIKVPDLNKTKIKFNMNAGNVEIRAWDLLFKEDETEWEQINAWKTKHPNNNLNHADYLLAFAQYYPYGPEYFIFGGLYKIKKIEPEVFDEVGYELTLMDDYKEYRKRLIVKLKKPIGRDLYNRLYKNIQDTLEPEVYEIAPNTKLGHFPGYQNVTLSHPQMQQIISRNEPSWKQALMNVKGVYVITDLSNGKLYIGSASGNTDGIWQRWSDYANIENLTGGNKLLNEIKLDKGKDYIVNNFQYSILEIFDTKTKADIIINRENYWKNVFCTRKYGMNYN
>NZ_CP014119.1|WP_002470061.1|971412_972381_-|zinc-ribbon-domain-containing-protein
MKYCANCGYKINNNQSFCNNCGAKLHDFQSNQQSNHNKIDKVRGVNNRYTYRYRDNNQHKRSGFGKVLIAILAVVILGLLVSGLYFAYHQFKSHNSSNGTTQSQSSNTSDDNAHGAQIDIFSDTFDQSYIKAPSKDGYAEIYNGMSRSDVETKYGKSNGTIYLQGSTYEKYGDLAVMYDEYDDVSQVIVTPSNITEDDYIEHYGEPDDREGNIFIYDAYKDNDFSVLVTIKDGMVLAIENVDQLPSNSSDDSDSNEVSSKSEARAIANDVLDSSDWIHSVDEGEFSYRVNYGRENEDRAHRAIIVEKNDSSTSEWDGDEWDY
>NZ_CP014119.1|WP_002470060.1|973322_973544_+|hypothetical-protein
MNHDTTQSGWRTGASCLASQNYTSILKGLVHHFTAIEDEEILDKIYDDFMNDNSITTVLNNDLQTIISHYLSK
>NZ_CP014119.1|WP_002470062.1|973686_975474_+|SAM-dependent-DNA-methyltransferase
MNEHKRHQQTSINVQKQANLIWNVADILRGLYKPHEYGKVILPMTVIKRLHDTLLKTRDEVLKTAENTQSINNVMRERLLKNASGYSFYNTSLYTFETLLADPANIESNFRAYLNGFSENMQDILDNFKFDVEITTMADNDALFYVIQEFNKADAYLGPDKMTSTDMGYVFEELVRKFSESYNEEAGAHFTSRDIIYLMTDLLLIEDKDTLFKEHVFKTVYDQTMGTSQMLSAMTERIHDMNDTAEVATFGQELNPETYAIAKADTMIRGGEPENMALGSTLTNDQFEEFTFDYCISNPPFGVDWKKDQKAVKTEHELGELGRFGVGLPRASDGQLLFLLNGISKLKETGRMAIIHNGSALFSGNPGGGESSIRQYVIENDWLEGIIQLPNDLFYNTGIATYIWIITKDKSLKRQGKVQLVDASNMYEKRRKNIGEKRVDISEACREKIVQAYGEFDNKEYHFDDRTVESKILSNESFGFTRVTIERPERNENGDIVYKKNGNISVDTNLRDTEDIPLTENINEYFEREVLPFSQDAWIDRKKDKVGYEIPFTRLFYKYTAPEPSEVIAERIKKLEESIVENFQALSGKDVENVD
>NZ_CP014119.1|WP_002505430.1|976771_979801_+|type-I-restriction-endonuclease-subunit-R
MIANREINFEQDIEASLVQYGGWESVRFQDTHYDASVALDSVVLLEFVKETQPKNWKRYISVYRTDAEQKFLKRLNEEITTHGILHVLRKGIRDRGVSFKVVYFQPASSLNTENIKKYKANRFQCVRQFQYSNQHRNTIDMVLMINGIPLVALELKNQYTGQNVEHARLQFEQDRDPRELIFQFNTRFLVYFAVDHFNVLMTTKLAKSKTYFLPFDQGSNGPGHVGGAGNPSNPNGYPTSYLWEKVLTSHQLLDIIERFMKLEEKKKLLIFPRYHQLDVVKKLISDTHHHGPGKNYLIQHSAGSGKSNSIAWLAYHLASLHNDKNQPIYSSVIIVTDRTVLDRQLQNTLMSFEHTTGQVETIGDNKTSQDLKTAINDQKKIIITTLQKFPVIYDEIDNTAGRSFAILVDEAHSSQTGSSAQKLKHALADKEASLKEYQEFEESVENQSLDDQDQIVQTLLSQGQHDNLSFFAFTATPKEKTIEMFGTKQGDGSYHPFHIYSMRQAIEEGFILNVLQNYMTYSTSYKIAKSIEEDPELPKTEAVRAIAKYQSLHPWVLRQKAEIMIEQFRSVTQKAIQGRGKAMIVTASRLHAVRYMQEFKKYIKEKGYTDMDVLIAFSGTVEDDGIEYTEPKMNLTHSGERIQENQLKEAFHSEDFNLLIVAEKYQTGFDEPLLHTMFVDKRLRGVKAVQTLSRLNRTMPGKTDTFVLDFVNTEEEIYEAFQPFYEATSLKEEININLIYDTQSKLRKFHIYNDDDIQTVMKLNRQAKQKQNDQLLGRLSSVLRPVISRYNDLPEDVQYDFRVTLRNFNKWYNYIAQIDRTFDKELLEESIFTGFLLKFIPKKQRNYIDIEDKVKLEYYKLQEDFRGNIELVNEDMESGQLAHPSEVSATVKSEEEYDSLNEIIHKINERFPDDFTQGDRVLVKNMRETLINNTDAKLVNMAQNNSEEMFANSLFQQQFQDFLIDQYNQGEAAYSKMFSNNKDFYDTVYQLLAKDYYRWLRSQKADNFA
>NZ_CP014119.1|WP_002470059.1|979973_980180_-|hypothetical-protein
MASEIISAVIEAIRNYIINKISYNKKIKDYRNAFVSPNKIELLKLSTYLERATYIVDYYGEISMDEKL
>NZ_CP014119.1|WP_002469410.1|980759_981395_-|ATP-binding-cassette-domain-containing-protein
MLKIERLTKYIDTQLIFKEISCTLNDQHLLISGESGCGKSTLAKIIAGLDTDYQGELYLNGRLRESYTSKEWMKHIQYVPQYQRDTLNQRKTVLATLLEPLKNYKLNKQRYTSSIEAVLDQCNLPHDILNQKVSTLSGGQFQRVWIAKALILEPEILILDEATTNLDVINEEAILQMLISLKMTQLIIISHDTYILSQFEGIQLQLNKLNN
>NZ_CP014119.1|WP_002469398.1|981387_982155_-|ABC-transporter-ATP-binding-protein
MSNHQQKNNAVNTVVNVNKLSILDQEKVLLKDVDLTVTKGSFHCIIGESGSGKSLLTRTILGMKRPQLCYQGDIDIDLTKTDAVFQDVQSNMFQNITLVKHFQYIYEANRTHLTKQCIKEDVLQMMQLLGLRQGEHLLERYPFELSGGMAQRVAFIMSLIRRPDYLFLDEPTSALDQGNVKRFMHYLLKAQERYQMTIVFITHDINLVKDFATHISIMQQGQLIESGEAASILTKPIHSYTKKLITIAHRRQLYA
>NZ_CP014119.1|WP_002469402.1|982121_982889_-|ABC-transporter-permease
MKKYQTYIAIGSLLSLMVVLITYGLMQDTQHLNPLESLNGQHWLGTDQLGRDFLVRLIVGSLVTLSLTGIVILLSVCMGLIFGLIAGIERRWLDQIIMFVADMLLAIPSFIIALVILSLVSNSMIGLILALTIGWIGRYLRYFRNLTRDIQKRPFVQYARLSGNSTFKTTLTHVIPHLLSNIFALVTADFGKMMLSISGLAFLGLGIKPPTPELGTILFDGKSYFNGAPWLFFFPGVLLGGFALLCQIINKKITQ
>NZ_CP014119.1|WP_002467620.1|982888_983845_-|ABC-transporter-permease
MLKRTIKFILYLIVSSFIIFILVEKTSGNPAILYLQRHGYTSITQDNIEAAQHKLGLGQHVLLRYIDWVGHALTGNLGYSFSTNETVTAMIMEAIMPTLVLIIVSSCIMLPFGYIVGYFVGTRPHTRYANGIRGFAQVMTSMPEYWLAILFIYYLGVRWQLLPFVGSDSWQHFVLPIFTIVIIEGCHILLMTAHLIAQTLDQDAYQLAQLRHFSLKARIIVQIKEIFAPLMTISINSIIHLIGKAVILEVIFSMSGIGKLLINAINQRDYPLIQGIVIFIIVFIMLMNYLGDVIILKNEPRLRRRHTQQSGNEKRGAM
>NZ_CP014119.1|WP_002469417.1|983847_985401_-|nickel-ABC-transporter-substrate-binding-protein
MKKRVLMTVAASATLLLAGCGNGQKEDKDVTVSLPTEAKADKLDAQGYDATMPVYSAVYDALVKYDKDKGIKAGLADKWSVDESGKVYEFHLKKNVKFSDGSALDAKDVKFSIDRAKAMNKNTTVETLKKLDKVVVKNEHVVQIRLKSPSNQVLNELTQVRPLRIMSPHSVEDGKVNGKFEKAIGTGAFVVDKTGKEKTTMKPNKYFDNGHPVNYHLAFQTIEDGDSRNSAVQSGSVDISGGALGMLSDEQIKQDKKNKNLTIEDRPSTVSHFMAFNPKNDVLNQRTIREAISKSIDAKDIAGKSVNGLFQKNVQFVTKNNQQPHDYDMKAAERLLKSERYHKNDDGIFEKNGKPLSFNLVIQTAEFPNWKDKAEKVQRQLKQAGIKLNVKTLDSQSYYDTLWTKKDYDLIFYRTYSDALMPYNFMSSVFKNNDGQPGVLADDETLTKQLDNFPSTVSKEGQKRSFDDIFKHFNQQYYGVPIAYPNETFVVSDKVKQFKFSGLTDAPIDYKALKVNE

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Crispr_ID: NZ_CP014119_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_6

1006414-1006593

Orphan

Consensus_repeat	Method
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC	PILER-CR
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP014119_6

>merge|NZ_CP014119|6|1006414-1006593|PILER-CR,CRISPRCasFinder
GTTCTCATCCCCTGTTCTCCGGGGTAGTTATCGAATTGAAGTTTACTTTTCAAGAAGGAAATAGTAAGTTGGAGTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATCTTGGTTTTGTATTAATACAACAATTTGTGATTAGTGTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC

>NZ_CP014119|6|2|1006414-1006593|PILER-CR
GTTCTCATCCCCTGTTCTCCGGGGTAGTTATCGAAT	TGAAGTTTACTTTTCAAGAAGGAAATAGTAAGTTGGA
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC	TTGGTTTTGTATTAATACAACAATTTGTGATTAGT
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC

>NZ_CP014119|6|6|1006414-1006593|CRISPRCasFinder
GTTCTCATCCCCTGTTCTCCGGGGTAGTTATCGAAT	TGAAGTTTACTTTTCAAGAAGGAAATAGTAAGTTGGA
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC	TTGGTTTTGTATTAATACAACAATTTGTGATTAGT
GTTCTCATCCCCTGTTCTTCGGGATAGTTATCGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_002467980.1\|1021678_1021912_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_001830720.1\|1000903_1000984_-\|potassium-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP014119.1\|WP_099797811.1\|1004977_1005043_+\|epsilon-family-phenol-soluble-modulin	unknown	unknown	unknown
NZ_CP014119.1\|WP_002469420.1\|1008098_1008818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_001551920.1\|1016512_1018021_-\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_CP014119.1\|WP_001830698.1\|1001150_1003805_+\|sensor-histidine-kinase-KdpD	unknown	unknown	gnl\|CDD\|225115
NZ_CP014119.1\|WP_001830719.1\|995935_996277_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_002469425.1\|1007205_1008102_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225212
NZ_CP014119.1\|WP_002469414.1\|1011973_1015093_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_CP014119.1\|WP_001830703.1\|1005828_1005984_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014119.1\|WP_001830712.1\|996585_997146_-\|K(+)-transporting-ATPase-subunit-C	unknown	unknown	gnl\|CDD\|184446
NZ_CP014119.1\|WP_032601514.1\|997160_999182_-\|K(+)-transporting-ATPase-subunit-B	unknown	unknown	gnl\|CDD\|234905
NZ_CP014119.1\|WP_001830710.1\|1003809_1004523_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP014119.1\|WP_000036757.1\|993149_994079_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_CP014119.1\|WP_002469391.1\|1010733_1011990_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341202
NZ_CP014119.1\|WP_002469407.1\|1015200_1016520_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_CP014119.1\|WP_104832453.1\|1018109_1021433_-\|MSCRAMM-family-cell-wall-anchored-protein-SesJ	unknown	unknown	gnl\|CDD\|380146
NZ_CP014119.1\|WP_002505145.1\|999200_1000883_-\|potassium-transporting-ATPase-subunit-A	unknown	unknown	gnl\|CDD\|224971
NZ_CP014119.1\|WP_002469396.1\|1009247_1010744_+\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_CP014119.1\|WP_002469297.1\|1023165_1023795_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_002469407.1\|1015200_1016520_-\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	6.26222e-160
NZ_CP014119.1\|WP_001830698.1\|1001150_1003805_+\|sensor-histidine-kinase-KdpD	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0
NZ_CP014119.1\|WP_002469396.1\|1009247_1010744_+\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.65429e-143
NZ_CP014119.1\|WP_002469425.1\|1007205_1008102_+\|hypothetical-protein	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.29755e-09
NZ_CP014119.1\|WP_001551920.1\|1016512_1018021_-\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_CP014119.1\|WP_001830712.1\|996585_997146_-\|K(+)-transporting-ATPase-subunit-C	gnl\|CDD\|184446	PRK14000, PRK14000, K(+)-transporting ATPase subunit C.	9.41341e-96
NZ_CP014119.1\|WP_032601514.1\|997160_999182_-\|K(+)-transporting-ATPase-subunit-B	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP014119.1\|WP_001830710.1\|1003809_1004523_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.0817e-63
NZ_CP014119.1\|WP_000036757.1\|993149_994079_+\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_CP014119.1\|WP_002469391.1\|1010733_1011990_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341202	cd17521, RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) TRD2-CR2, Escherichia coli E24377A S subunit (S.EcoE24377ORF286P) TRD1-CR1 and Pseudoalteromonas species P1-13-1a S. subunit (S.Psp1bORF2093P) TRD2-CR2. Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) recognizes 5'... TCTANNNNNNRTTC ... 3', and the recognition sequences of Escherichia coli E24377A S subunit (S.EcoE24377ORF286P) and Pseudoalteromonas species P1-13-1a S subunit (S.Psp1bORF2093P) are undetermined. The restriction-modification (RM) system S subunit generally consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) TRD1 recognizes TCTA/TAGA, and -TRD2 recognizes GAAY/RTTC. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. In addition, this family includes RMtype1_S_TRD-CR_like domains of various putative Helicobacter type II restriction enzymes and methyltransferases, such as Hci611ORFHP and HfeORF12890P.	1.60059e-70
NZ_CP014119.1\|WP_104832453.1\|1018109_1021433_-\|MSCRAMM-family-cell-wall-anchored-protein-SesJ	gnl\|CDD\|380146	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	1.44601e-111
NZ_CP014119.1\|WP_002505145.1\|999200_1000883_-\|potassium-transporting-ATPase-subunit-A	gnl\|CDD\|224971	COG2060, KdpA, K+-transporting ATPase, A chain [Inorganic ion transport and metabolism].	0
NZ_CP014119.1\|WP_002469414.1\|1011973_1015093_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0

>NZ_CP014119.1|WP_001830703.1|1005828_1005984_-|hypothetical-protein
MTASNAPDIGISIMKEQDYHLENVTFKKIEDKVNHSVSFYVNKGSVAKLNL
>NZ_CP014119.1|WP_099797811.1|1004977_1005043_+|epsilon-family-phenol-soluble-modulin
MFIINLVKKAIGFFKNLFGNK
>NZ_CP014119.1|WP_001830710.1|1003809_1004523_+|response-regulator-transcription-factor
MTTTLLVIEDDDAISHLIDVALTMNYYKVIKAKVGKEANFRIRTEHPDIILLDLGLPDIDGLKLIQQIREYVDTPIIVISARTEEETIVKALDYGANDYMTKPFNIDELKARIRVALRVTKKLDTVQDNFENGPLKIDFNAKMVYINNQSIHLTPYEFQLLDILSQHVGKVLTYQILLKALFGYVNKCEMASLRVHMASLRKKLNYSDKHEDGSLCSKDKKLIITHPRIGYQMQHIG
>NZ_CP014119.1|WP_001830698.1|1001150_1003805_+|sensor-histidine-kinase-KdpD
MESSHKYRGKLTIYLGYSPGVGKTYEMLSNAINLYKEGVDIKIGYIEPHQRPETNALAKHLPEIVTSSRKFGSHLFHFIDVNQIIEAHPDIVLIDELAHTNISKTRHIKRYMDIEEILSHGIDVWTTLNIQHIESLSGQIALMTGIQVKERVPDQFIMSADAYEVVDISPKMLIQRLKAGKVYKKERLDTAFSNFFTYENLTELRELTLRTVADIMSQKEQQYKKKHIDVTPHIAVAVSGSIYNERVIREARRAAYREHAKFTAIYIDTFETRSESRKQDHYIHKNLTLAKSLGAEIKVLYAQDIAKTLINWCDKSLVTKLVLGQSEQPRWKEYFKKSLIEQINHTPHHFKLEIVPIHHIYSNKQNRERSNRKKDKQPYQLALSVDIVKMLIIQIVCVLIGMWIYNMDKNESSAIILLLFFIGIIVLSICTQSYLIGFFASILNVFVFNYFFTVPRFTLEMYRFEYPITFVTSIFASIFTSGILKNLKYQHSLTERQLYRTDVMLQFNQSIKESYSIMKLLTIAGEQIHQLLKQDVTIFQIKSKKVKQSASFGSSTGMHSHETEDAETLSWVIENESRAGRLTDTFPGSKFLCVPIGTRPVKGIVLIQFTDEDYIDTYDSFILDSMLNDLTLAVENVALLRQTRQSMVIAEREATRSNFLHSISHDIRTPLTSIIGNLDMVKHHGDGLDCKERAHLLSASYEEAQYLYTLVTNILSLTKLESSDIQIKRTPYLVDELLEEFEAGLVRRHQQQKVNIEDDDTLALVQIDSKLILQVLFNLVDNALKHAESRSKIILRVNEQRSQILFEMIDDGRGIPDEERDLIFNPYYSGDYFKDNKKYSLGLGLYLVQLILKQHGSQLKYRPNHPQGSIFYFYLDITQIEMEG
>NZ_CP014119.1|WP_001830720.1|1000903_1000984_-|potassium-transporting-ATPase-subunit-F
MITLLSLVVIGLILFLFYALLWSEKF
>NZ_CP014119.1|WP_002505145.1|999200_1000883_-|potassium-transporting-ATPase-subunit-A
MSIILFLITFIAVSYVMSRYLYTVALLVPSKMDVVFSPIERGLYKLIGTQLEHMSGKTYLKHFLCFNGLTGALAFLLLLAQQWLWLNPNHNLNQSIALAFNTMASFVTNTNLQHYTGETGLTYFTQMGVITCLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDVVRFIIRVLLPLSFIISIFLISQGTPQTLNGNLVVETLSGVKQTIAYGPMASLEAIKHLGTNGGGFLGGNSSTPFENPTYWSNFVEALCMMLIPGSLVLLFGRMLKTKNHIHSHALMIFIAMFTIFIVFLLICLHFESIGNPVLHHLGIDGGNMEGKETRFGIGQSALFTTITTAFTTGSVNSMHDSLTPLGGIVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKTPTYLGMKIESQEMKWIALTFLVHPLLILIFSALAFIVPGAKDALTNPQFHGVSQVLYEFSSSSANNGSGFEGLKDNTVFWNVSTAIVMLLARYIPIVLQLMIVSSLVNKKTYQHTQHIQDVPISNVFFSMILIIFIILLSGLTFLPDLMLGPIGEHLLLNP
>NZ_CP014119.1|WP_032601514.1|997160_999182_-|K(+)-transporting-ATPase-subunit-B
MMETSKIFESSLVKQALKESIVKLNPTYMIKNPIMFVVEIGMLLSFVLTFIPNLFIQEHVSRIYVLSIFIILLLTLIFANFSEALAEGRGKAQANALRQTQTEMTARLIKEDGSYETIDASDLKKGDIVRVETGEQIPNDGQVIKGIATVDESAITGESAPVIKESGGDFNNVIGGTTVASDWLEIEIMSEPGQSFLNKMIHLVEGATRKKTPNEIALFTLLMTLTIIFLVVIMAMYPLAQFLHFNLSIVMLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVESCGDVNVLILDKTGTITYGNRMADAFIPVATTSYERLVRASYESSIEDDTPEGSSIVKLARAQGINLPQRTGEYYPFTAETRMSGAKFDDYEVYKGAPNSMIKRVKEAGGVIPEDLDECVTEVSRKGGTPLVVIEDNNILGVIYLKDVIKEGLVERFQELRVMGIETVMCTGDNALTAATIAKEAGVDRFIAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTTSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMSAMPAMNQLNIMHLHSPESAVLSALIFNALIIVLLIPIAMAGVQFKGASTQTILMKNMLIYGIGGMIVPFVGIKLIDLAIQFFI
>NZ_CP014119.1|WP_001830712.1|996585_997146_-|K(+)-transporting-ATPase-subunit-C
MATIRKSVGLLIIVFVLCGFIFPLTVTAIGQVIFPHQANGSLIKQDGKVIGSELIGQQWTATKYFHGRISAVNYNMNGQQLKANKGPASGGSNLANSNPLLKQRVEDIISKEDKRPTVNAVTASGSGLDPDISISNAHAQVKRIAEARNIKASTVEQIIQQYKQSSPMTEDYVNVLKMNLALDKVK
>NZ_CP014119.1|WP_001830719.1|995935_996277_+|hypothetical-protein
MKNILKLIFLFLISLIPIEFIGLMTDYQTGLLLGYLPFIIVTIILGYLTRSFILYFLVFVSRILGTFIFVICANLCLNFYEVDFYFKPFDVLGFVVFLSILSQLMILITIGLV
>NZ_CP014119.1|WP_000036757.1|993149_994079_+|carbamate-kinase
MSKIVVALGGNALGQSPKEQLDLLKSTSKSLVSLIDKGYEIVISHGNGPQVGSINLGLNYAAEHKQGPPFPFPECGAMSQAYIGYQMQESLQNELHSMGIDKQVVTLVTQVQVASDDSAFNNPTKPIGLFYTKEQADKFTKEKGYTFVEDSGRGYRRVVPSPQPISIVELDSIETLITHGTLVIAAGGGGIPVIKENEVYTGVDAVIDKDKTSALLAAHLQSDQLIILTAVDHVYINYGKENQRGLDEVSVDEMKKHISDGQFAKGSMLPKVEAALQFLEKNTKGSVLITSLAGLGDALDGKIGTLIKN
>NZ_CP014119.1|WP_002469425.1|1007205_1008102_+|hypothetical-protein
MSIIKSYSVGNGDMFYIKHGTDNFSIIDCCLYNDKKDIIIKEILEIASTKEIVRFISTHPDEDHIHGLELLNKNLNITNFYCVKNNAKKNDFSQSFEEYKKLRDSNKSFYIHKDSQRKWMNISDESRGSSGINILWPDTDNEYFKNELQKAAEKISFNDISPIIQYKLDKGVTALWMGDLTTDFMEKIENEVNWEKVDILFAPHHSRKSGRVPSNILNKLNPKLIVVGEANSKDLYYYSNYTTITQRKAGDIVFDCQTGTINIHVSNLNYEAKNLEKDSKIPTIYDNLKYIGSVTTYN
>NZ_CP014119.1|WP_002469420.1|1008098_1008818_-|hypothetical-protein
MKEFLMIFFNKYELKAIIAPGMISIMSFFTTLIIYFPDSLNLGSSLIVIILLIFYIYLFSIIARENGKMVEKKLFSQSSNVYPTTQILRYSDDTLNIKTKERYHSFLQENIPCIELPSYEDARDKKENYFDDEYDSAIDWLLKNTREDYMTAQHNMEYGFYRNLLGIKYIGIIIVLISIVFSIVVFILSQENVTIQLVLSSIINVFFLYFWIFKVTKTQTRKSAKRYAQSLLANCDFKS
>NZ_CP014119.1|WP_002469396.1|1009247_1010744_+|SAM-dependent-DNA-methyltransferase
MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYEELKQDPYADEEDQDEYLAENIFWVPKEARWHYINDNAKKPEIGQLIDKAMIAIENENESLKGVLPKEYARPALDKEKLGDIIDLFTFKVGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNNLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWKGTNDKSYEDIAGFCKIANLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMERITSELSEQFAKSKELEDQIRKSLEGLGYGV
>NZ_CP014119.1|WP_002469391.1|1010733_1011990_+|restriction-endonuclease-subunit-S
MEFNKYKLKDLTVNGKGEYGIGAPAVKYSPNLYKYLRITDIDDNGFINTNQMKSINDKNEEKYLLKANDIVFARTGNSTGKSYFYNSDDGPLVYAGFLIKFSLDPTKLNPKYLRYYTLTNEYKGWINQFSIGSTRKNINAKIFGDMVISLPPRYYQDFVVDILDSLERKVKINKQMVANLEELSQTLFKHWFVDFEFPDEDGNPYKSSGGEMIDSELGEIPSDWKVGVLSDMTEIIMGQSPKSDTYNNNKVGLPLLNGASDFKNRNIKPTKYTSAPKKIGHNLDYVFGVRATIGLVTELDGEYAIGRGAGLSKNNEENREFIYEILNQAFTYFERIGSGSVYINISSKDLKQYKLIIPSKQVLMKYHYQLEPIFSELHNRKEQITSLTNLRDTLLPKLMSGELEIPDDIEVNIDEFSI
>NZ_CP014119.1|WP_002469414.1|1011973_1015093_+|type-I-restriction-endonuclease-subunit-R
MNFQFNEDDLEQVALEWLQSLGYDYKKGSEISVTGLAPERKSDKDVVLHERLEKALRKINSDIHPRFIEKAIHELTLEKSPNLLENNLTFHENLINGIEVEDYDNEGQSIVEIVKIVDFEHPQNNDFLAVNQLTIVNGDYTKRPDIVLFINGLPIVVIELKNSTYETVGVEDGYHQLETYKMCIPQLFTFNEVLVTSDGINTKAGSLTANYDRFMTWRSKDGQTESSPGLASLDVLIHGMLNPETLLDLIRYFVLFQDDGKEHISKILAAYHQYYAVNKAVDRALLASSGQGDGKGGVIWHTQGSGKSLTMVFFSGKLIQMLNNPTLVVVTDRNDLDNQLYSTFVKSKGRSGKGLLRQTPKQAETRKELKSLLSVESGGIVFTTMQKFEPEQNETTMAALTERKNVIVMADEAHRTQYGFNAKYDDKGEGIKYGYAKYLRDALPNATFVGFTGTPVASTDKNTQMVFGNYIDVYDMTQAVADGSTVKIYYESRVIPLNLPQNLDLDEAYNDITEDQEEDVKQRLKSKWSRIEALAGAKPRVEALAKDIIQHFETRQQAMKGKGMIVTMSRRIAVDLYDEIVRLKPEWHSDDDDKGVIKVVMTGSSSDPTSFQRHIGPKKRRNLLEKRMKDVNDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTESDQAQTAIDTDKAVELMLLKYDVIQDMLYNLDYSKFNSDKKSERYYTISNTMDYVIGLGEDERQRFIKTVTELGKAFALCATESTAQELNDEIAFFKAVKAGLVKLLQPPKEGKTRKTPAEVEADINQLVSQSVVTEDVIDVYQTLGLEQPDLSILSDDFLKEVEGLKQKNVAVELLNRLLKGQVKSLMKTNATVSKRFSEMLGNSINKYNSRSIETSKVIEELIQLAKDIKQEQQRGNELGLNSDEIAFYDALASHETAKEAMGDKELRAIAHELTKTVKENMGVDWSKRDSAKAKMRVAVRRLLKKYGYPPDLQKMAVEQVVEQAELMASNK
>NZ_CP014119.1|WP_002469407.1|1015200_1016520_-|accessory-Sec-system-glycosylation-chaperone-GtfB
MINLYDNLNSQTLQLYKTFINANIKSTTVVVNDNGFLPSDVLSPYKFFSGNSIENERPLYFNDVPVPKYWEIEGSNQSAVIKDKDKIRGKILYQKGYRNRVVASVEWFNKKEHVQFIDYYNQHGFRYAQLVMDDNQNQIMKRYFDQNNNEFLVENLVTKDLILRWNNKDIFFDNRISFLSFFFEKANLSIKDIVLNSFATSFLFLYRQRDFNMKCRIFWQEKIKDDLPENMKIALKNIDNLKILIPDKKEYYRVMDSVETSYRHKIENSGYVYEFLKVNKYNNEALIITNSDNIPYVEYIARENQNVTFHIASKTEMSSRLLQLDGIQNINLYPKSTEETILNLCCKCDIYLDINKGKEIFESMYLAFAHEMIIIAFEETIHNRQFVHSSNIYKLDNYYDLSNAINQISNDKTLFSDRLNMQLRSANSVSIESFLNKMK
>NZ_CP014119.1|WP_001551920.1|1016512_1018021_-|accessory-Sec-system-glycosyltransferase-GtfA
MTIYNLNFGIGWASSGVEYAQLYRRNILHDLNEDFKFIFLDFINKENIQTLTSNLGIENDEVIWIYQYFTDIKIKPTSYTIENIIEKLESNDVKVKSIKPKVKRIYFNNKSCYVNCYLKYKNEDIVDRAEFVSSGKLIRKEFYTYTKVFTEYYAPYNKKAKVYLRKFFNENGSVAYEEIVKDDDNMYIFPNKILYSKKEFIGYFISQLNLKDKDILLVDRSKNIGQVILENKKEGHVGVVIHAEHYNHSNTNDQYVLWNNNYEYVFNNAQHIDFFIVATEDQKAVLQLQFEKYKNLKPKIYTIPVGNIKYLKFEQQRKPFSVITASRLANEKHVDWLIKAVIKAHKINDDIRFDIYGEGSERQKLQQIIDNYQANNYIHLKGHMDLTYIYKSYELYLSGSTSEGFGLTLMEAVGSGLGIIGLDVYYGNTTFIKNNVNGYRVPIDITNLDEDTLITELTSKLLLFFTQDNEKTRAESYKIANNYLIGNIKEKWKNLIDEVLND
>NZ_CP014119.1|WP_104832453.1|1018109_1021433_-|MSCRAMM-family-cell-wall-anchored-protein-SesJ
MKKKLDFIPNKLNKFSIRRFTVGTASILVGSTLLFGIGNEAHAAEKNQELNTTANVADSDVGEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEETPSNEATNEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEKSTDNSTSNPEVDSEVLDNSKQGTDNDNSSNHSEDNIVTYAEPTALTNTRSVDSPSRVSSDNSQAQKQGKNVNDSIKVNSVDTDKEYVEPNNGQGFSTNVSFEVDGKVNKGDYFTVDMPEYADFNGIADYKAANNKIYPTINDGEQVVANGVYDTETKKLVYTFTDYVNKKDNIKGQFEIPQFIDRKNAKTSGDYDLNYNIADKTVSKPMKIVYNNYDEGHVVANTSSLITKADLFNVGSHDYTQYIYVNPKSEDSYNTRLTIQGYQEDLNNSSTLLNPKDSNIEILDAKSSDNITPSFYVNDSDFENVTNQYKIDQIGDKKAQIDFGHIDHPYIVKVTSKIDPNSSKDLRTRVIMENENAEGTKDFYVHDNTVERLGANGVATGNEKLYNLGDYVWEDTNKNGIQDEDEHGIEGVEVSLTRPNGTVETTTTNSEGKYEFNDLQNGDYVINFKTPEGYTATKAYEGNNAEVDSNGLSTVGTIKDADNWTLDSGFYKTPSKYSLGDYVWYDSNKDGYQDNDEKGIKGVKVTLKDSEGNTLKTTETDENGKYRFDDLDSGDYTVHFDKPEGLTQTSVNSGNDDAKDADGEDVHVTITDHDDFTIDNGYFEDSESDSSSESESDSESHSDSESHSDSESTSESDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESGSESHSNSELPDTGEEDNHQGLIGGVLAAFGGLTLLGRRRKKEEK
>NZ_CP014119.1|WP_002467980.1|1021678_1021912_+|hypothetical-protein
MEHINKDKNDEKSKELDKRLGINGYYKTDLDLEIEKELLESPNESSSSVAKRIRIISMIPLIILLILAFIRIIRTFI
>NZ_CP014119.1|WP_002469297.1|1023165_1023795_-|hypothetical-protein
MNLRGHENRLKFLAKYDVTPISHLKLLEGQKKDGEGGILTDSYYCFSYSLKGNSKKVLGTFNCGYHIAEDLLKLSNQDKLPLFNPFKVINEGNQLQGVTNKGNLNINRQRKQYNEVALQLSNAINLIIICYEGNIKEPLSTIKYETDKYYYSEPYDSKIKAVNTIIGNLFDKKLVEKISEINVNQKIRKFDFSLLTNKIKKYNIQNNFE

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Crispr_ID: NZ_CP014119_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_7

1888989-1889090

Unclear

Consensus_repeat	Method
TCATGTATAAGAAACACTAAATACCTATGTATTAAGTG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP014119_7

>merge|NZ_CP014119|7|1888989-1889090|CRISPRCasFinder
TCATGTATAAGAAACACTAAATACCTATGTATTAAGTGAAAAGAGGAACACATGAGCTTGAGGTTCATGTATAAAAAACACTAAATACCTATGTATTAAGTG

>NZ_CP014119|7|7|1888989-1889090|CRISPRCasFinder
TCATGTATAAGAAACACTAAATACCTATGTATTAAGTG	AAAAGAGGAACACATGAGCTTGAGGT
TCATGTATAAAAAACACTAAATACCTATGTATTAAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_001830161.1\|1888215_1888950_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP014119.1\|WP_001830107.1\|1880751_1880940_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP014119.1\|WP_002456580.1\|1881686_1883345_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_CP014119.1\|WP_002436293.1\|1898969_1899320_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP014119.1\|WP_002456579.1\|1883548_1885597_+\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP014119.1\|WP_002439483.1\|1897221_1897497_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP014119.1\|WP_001832559.1\|1897623_1898127_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP014119.1\|WP_002469385.1\|1887296_1888223_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP014119.1\|WP_001830156.1\|1881297_1881672_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP014119.1\|WP_104832474.1\|1898126_1898864_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP014119.1\|WP_002469384.1\|1886317_1887295_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP014119.1\|WP_002469381.1\|1879384_1880029_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_CP014119.1\|WP_001830164.1\|1880033_1880669_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|273588
NZ_CP014119.1\|WP_002456575.1\|1889525_1890263_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP014119.1\|WP_001830113.1\|1895546_1896914_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP014119.1\|WP_002456573.1\|1893955_1895182_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP014119.1\|WP_002457379.1\|1895183_1895516_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP014119.1\|WP_001830099.1\|1885755_1886316_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP014119.1\|WP_001830184.1\|1889177_1889411_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP014119.1\|WP_002456574.1\|1890389_1893959_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_001830161.1\|1888215_1888950_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139
NZ_CP014119.1\|WP_001830107.1\|1880751_1880940_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_CP014119.1\|WP_002456580.1\|1881686_1883345_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_CP014119.1\|WP_002436293.1\|1898969_1899320_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_CP014119.1\|WP_002456579.1\|1883548_1885597_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP014119.1\|WP_002439483.1\|1897221_1897497_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_CP014119.1\|WP_001832559.1\|1897623_1898127_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_CP014119.1\|WP_002469385.1\|1887296_1888223_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.85618e-127
NZ_CP014119.1\|WP_001830156.1\|1881297_1881672_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.7844e-34
NZ_CP014119.1\|WP_104832474.1\|1898126_1898864_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	8.95737e-167
NZ_CP014119.1\|WP_002469384.1\|1886317_1887295_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	1.20323e-175
NZ_CP014119.1\|WP_002469381.1\|1879384_1880029_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	6.783e-115
NZ_CP014119.1\|WP_001830164.1\|1880033_1880669_+\|thiamine-diphosphokinase	gnl\|CDD\|273588	TIGR01378, Thiamine_pyrophosphokinase, thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	5.23977e-73
NZ_CP014119.1\|WP_002456575.1\|1889525_1890263_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.98269e-117
NZ_CP014119.1\|WP_001830113.1\|1895546_1896914_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP014119.1\|WP_002456573.1\|1893955_1895182_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP014119.1\|WP_002457379.1\|1895183_1895516_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_CP014119.1\|WP_001830099.1\|1885755_1886316_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	1.79193e-99
NZ_CP014119.1\|WP_001830184.1\|1889177_1889411_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_CP014119.1\|WP_002456574.1\|1890389_1893959_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0

>NZ_CP014119.1|WP_001830161.1|1888215_1888950_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP014119.1|WP_002469385.1|1887296_1888223_+|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVSSGVLSFEDAVRIVRKRGQLMAQAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVEKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTEWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_CP014119.1|WP_002469384.1|1886317_1887295_+|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIRQAKIAGEENIVQIMKDTVGE
>NZ_CP014119.1|WP_001830099.1|1885755_1886316_+|transcription-factor-FapR
MKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_CP014119.1|WP_002456579.1|1883548_1885597_+|ATP-dependent-DNA-helicase-RecG
MSKVHLIESPYALDKIKGIGPKRLALLEELNIKSVEDLVLYLPTRYEDNTVIDLNQADDQATVTVQGEVYSSPTVAFFGRNKSKLTVHLMINHIAVKCVFFNQPYLKKKLELNSIVTIKGKWNRNKQEINGNRIFFKDQKNQEDTHLEPIYRIKEGIKQKQLRDNIRQALSDVTIHEWLTDDLREKYKLETLAYTIQTLHHPINKQNLLRARRTYAFTELFMFELRMQWLNRLEKTSDEAIEINYDINKVKQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIQLFGNTMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQYDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQSDYGNEKVGLLHGKMSAEDKDQVMQKFSEHEIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANVVEDYRMLEVARDEAAELIQSGQFFEQQYSHLREFIKQNLRHIRFD
>NZ_CP014119.1|WP_002456580.1|1881686_1883345_+|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEEEKEISVQQFAESFQAGVETAYKAVMKPVEGTILTVAKDAAKAAMDYVDQAEDCVDLMAHLIEAASESLDNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKIEAQAPKLDTESFVNDDHDFHGVINTEDIVYGYCTEMMVRFGKNKKAFDEQEFRNDMSEFGDSLLVINDDEIVKVHVHTEHPGDVFNYGQKYGELIKLKVENMREQHREVIRKEQDGLQSKEANESKTVETAIVTISVGDGIAELFKSMGATHIISGGQTMNPSTEDIVKVIEQSQCKRAIILPNNKNIMMASEQAASIVEAETVVIPTKSIPQGISALFQYDLESSLEDNKRHMSDALETVQSGSITFAVRDTKIDGIEIKKDEFMGLAEDKIVTSDVNQFHAVKGLLSKLLNEDSEILTMISGEDADNSITNQIINWIESEYPDVEVEQHEGGQPIYQYFFAVE
>NZ_CP014119.1|WP_001830156.1|1881297_1881672_+|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNDVIASVVGGKAVESYGIVGMASRQQVRDGIAEILGHDNYAKGIKVREDNGIIDVDMYIIVSYGVKISEVASNLQSTVKYTLEKTLNVKVNSINIFVQGVRVNETVKKV
>NZ_CP014119.1|WP_001830107.1|1880751_1880940_-|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNHRSHALNANKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_CP014119.1|WP_001830164.1|1880033_1880669_+|thiamine-diphosphokinase
MKINLLCSQRLLPNHIFEKEKDSNWAGIDRGALILVKQGIQPIFSVGDFDSVNNEERLMLMKNLQIEPVEAEKDDTDLALGVAQAVERGYTEITIYGATGGRLDHFMGVLQILQKPQYLHQSIKIKVIDQQNHIQLLNEGKYVINRDSTYPYISFIPLNDKTILTLQGFKYNLNQEHLNLGSTLTISNEVKVNEAIIRVEQGTVLKIRSRD
>NZ_CP014119.1|WP_002469381.1|1879384_1880029_+|ribulose-phosphate-3-epimerase
MVKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLPIDVHLMIEKPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVETILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQTSKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE
>NZ_CP014119.1|WP_001830184.1|1889177_1889411_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_CP014119.1|WP_002456575.1|1889525_1890263_+|ribonuclease-III
MANQKKKEMVHDFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_CP014119.1|WP_002456574.1|1890389_1893959_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLADLKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSVVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSEHQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_CP014119.1|WP_002456573.1|1893955_1895182_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDYSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_CP014119.1|WP_002457379.1|1895183_1895516_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_CP014119.1|WP_001830113.1|1895546_1896914_+|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_CP014119.1|WP_002439483.1|1897221_1897497_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_CP014119.1|WP_001832559.1|1897623_1898127_+|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_CP014119.1|WP_104832474.1|1898126_1898864_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKEIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_CP014119.1|WP_002436293.1|1898969_1899320_+|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR

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Crispr_ID: NZ_CP014119_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014119_8

1897021-1897116

Unclear

Consensus_repeat	Method
CATGCATAACCAAAAGTACGATTTACTTCGTAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014119_8

>merge|NZ_CP014119|8|1897021-1897116|CRISPRCasFinder
CATGCATAACCAAAAGTACGATTTACTTCGTAAAAGAGTAGTGGAACGCCTGAGCTAAAGCACATGCATAACCAAAAGTACGATTTACTTCGTAAA

>NZ_CP014119|8|8|1897021-1897116|CRISPRCasFinder
CATGCATAACCAAAAGTACGATTTACTTCGTAAA	AGAGTAGTGGAACGCCTGAGCTAAAGCA
CATGCATAACCAAAAGTACGATTTACTTCGTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014119.1\|WP_001830161.1\|1888215_1888950_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP014119.1\|WP_002456571.1\|1902445_1905046_-\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|370572
NZ_CP014119.1\|WP_002457379.1\|1895183_1895516_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP014119.1\|WP_002439483.1\|1897221_1897497_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP014119.1\|WP_001832559.1\|1897623_1898127_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP014119.1\|WP_002469385.1\|1887296_1888223_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP014119.1\|WP_104832474.1\|1898126_1898864_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP014119.1\|WP_002456569.1\|1907120_1908287_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP014119.1\|WP_002436293.1\|1898969_1899320_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP014119.1\|WP_002446283.1\|1908308_1909217_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP014119.1\|WP_002469384.1\|1886317_1887295_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP014119.1\|WP_002456572.1\|1899849_1902453_-\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|226888
NZ_CP014119.1\|WP_001829514.1\|1906242_1907013_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NZ_CP014119.1\|WP_002456575.1\|1889525_1890263_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP014119.1\|WP_002456574.1\|1890389_1893959_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP014119.1\|WP_002456573.1\|1893955_1895182_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP014119.1\|WP_001830099.1\|1885755_1886316_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP014119.1\|WP_001830184.1\|1889177_1889411_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP014119.1\|WP_001830113.1\|1895546_1896914_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP014119.1\|WP_001829495.1\|1905374_1906238_+\|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl\|CDD\|236570

Protein	Function_ID	Function_description	E-value
NZ_CP014119.1\|WP_001830161.1\|1888215_1888950_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139
NZ_CP014119.1\|WP_002456571.1\|1902445_1905046_-\|YfhO-family-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	5.33371e-168
NZ_CP014119.1\|WP_002457379.1\|1895183_1895516_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_CP014119.1\|WP_002439483.1\|1897221_1897497_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_CP014119.1\|WP_001832559.1\|1897623_1898127_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_CP014119.1\|WP_002469385.1\|1887296_1888223_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.85618e-127
NZ_CP014119.1\|WP_104832474.1\|1898126_1898864_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	8.95737e-167
NZ_CP014119.1\|WP_002456569.1\|1907120_1908287_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP014119.1\|WP_002436293.1\|1898969_1899320_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_CP014119.1\|WP_002446283.1\|1908308_1909217_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP014119.1\|WP_002469384.1\|1886317_1887295_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	1.20323e-175
NZ_CP014119.1\|WP_002456572.1\|1899849_1902453_-\|YfhO-family-protein	gnl\|CDD\|226888	COG4485, COG4485, Predicted membrane protein [Function unknown].	0
NZ_CP014119.1\|WP_001829514.1\|1906242_1907013_+\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	3.62396e-100
NZ_CP014119.1\|WP_002456575.1\|1889525_1890263_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.98269e-117
NZ_CP014119.1\|WP_002456574.1\|1890389_1893959_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP014119.1\|WP_002456573.1\|1893955_1895182_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP014119.1\|WP_001830099.1\|1885755_1886316_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	1.79193e-99
NZ_CP014119.1\|WP_001830184.1\|1889177_1889411_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_CP014119.1\|WP_001830113.1\|1895546_1896914_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP014119.1\|WP_001829495.1\|1905374_1906238_+\|ribosome-biogenesis-GTPase-YlqF	gnl\|CDD\|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	7.55244e-160

>NZ_CP014119.1|WP_001830113.1|1895546_1896914_+|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_CP014119.1|WP_002457379.1|1895183_1895516_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_CP014119.1|WP_002456573.1|1893955_1895182_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDYSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_CP014119.1|WP_002456574.1|1890389_1893959_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLADLKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSVVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSEHQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_CP014119.1|WP_002456575.1|1889525_1890263_+|ribonuclease-III
MANQKKKEMVHDFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_CP014119.1|WP_001830184.1|1889177_1889411_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_CP014119.1|WP_001830161.1|1888215_1888950_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP014119.1|WP_002469385.1|1887296_1888223_+|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVSSGVLSFEDAVRIVRKRGQLMAQAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVEKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTEWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_CP014119.1|WP_002469384.1|1886317_1887295_+|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIRQAKIAGEENIVQIMKDTVGE
>NZ_CP014119.1|WP_001830099.1|1885755_1886316_+|transcription-factor-FapR
MKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_CP014119.1|WP_002439483.1|1897221_1897497_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_CP014119.1|WP_001832559.1|1897623_1898127_+|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_CP014119.1|WP_104832474.1|1898126_1898864_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKEIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_CP014119.1|WP_002436293.1|1898969_1899320_+|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_CP014119.1|WP_002456572.1|1899849_1902453_-|YfhO-family-protein
MIKNIWNKPIKRFTLIVLVSCILSFILYGPFLYQFITKGIVFSGSGDGFRQMMPFQMYLYEHFTSLKGFYDASFGLGGDYVKSLAYYYSLSPLMWINFSMIWILEQTINVNPHDISFWPINQLIMAYVRTVITFIFSFYLFSYLRLKPAPMFIATILYGMSTVVTYYNFTWSFYGNLLIMLPMSLWAIERFFKERKIGWFIFAIAYTLFSNFYFSYYEAIVIGFYFIYRFAIPHEKDIVNRWQKLYILVCATLLSVLVSIYGLYTGISSFLDNDRAQNPNFKITFFTNLFETNYNIFADGFYITISFIAIIALFCFKLYQHYYYKLFAIATWILLIGSFSQWFDSAFNGFSLPQRRWVYFLALSTSVLIALFIQHLSEISIKEYTFVAIPVFIYGFIFIALSERSVKWMFVALILIIVLFIFIKYKSLLTRTSMMVLLVVLFLAQQVLMTNDSRKITIEPYQTTIKTINDSSYRSPVLNKKIKYMHQSSTDPLKRLDYFSYYALNSPLIYHYNGTSLYSSIFDGDILKYYDQTLQINMPVDKNSTYRYLNNRANLMSLWDVQDRLRHPDDLNMPYGFKKKELITDKKDQWIHSVNTINYPSAHITNKIYDARKLKSPLDREQAMLKGVVLNHKSQANTDFKPNPNLLSNAKQNLNHANWIDSKHLKVKQHNGGVTLNLPRNIVKNYKDMYIEMDVELLSPDKEHKVGVNEYSQERNRLSYKYRRFVSPVTMRAKASNQLNIKMSKGVYRFKVKGIYGENYQTLKKASQQLQPVKVKKERNGFTIIKKKKEHGYLVLPMVYAKGMHAMANGKPLKVQQGNGIMTTIPVKEGQTKIKLSYTPPYFYLLITVSCIGIILSILFTHYVKRK
>NZ_CP014119.1|WP_002456571.1|1902445_1905046_-|YfhO-family-protein
MRRKACFIILLITLSLIGHSYIIFRFHHDGVLSTGPNDGMEQMIPIQMYLYHQWTQGNLFYSTHLGLGGDFFTDLSYYFSTNLIFILNVPIIKLCEIFFSLNTNQILLWMYNALIVSIIKSTIALFCTYLFSYYISKNKIISLLISFIFVMSPLYFRFTIYWPFFSDTFIWLPLLLLGIERLLRDFKAGLFILTVSLILINNFYFAYYFLIIGIGYTLIRIIYRHPKDSLTRWQASLTIICSALLALGNSMFVFFHGVQSFLNNRRQSFTGQVNWIEHLNKDTNIFFDNYLIVVIFLSIQALLTIKLYKHFYYKLFALLLLATIIFAFLPFVDQLFNGFSAPQKRWHFILAFNSSILIGLFVKYFKTIRPKTYIYTNLIAQSVIYISSISYNTFLPWLSLVPVVSVIGLLILLIKEKKVRYYLTYLYSISIAALSLMITFVFIKNQIFFQDHINRANKRYINSSFYNSAIQRSLVKEMNQTKNDDQRINWRVDEQDNTPMYQNFKGLSIYSSIFHHNILDFYYDALKINLAEESVSRYQSTNARQNIESLFSVKYLMMKDYQNFIPSYFKKVKSRGQYIIYKNQLPLPSVKVTQNIYNHKSLKKPIDREHAMINGAIVTSKGTAYHSKVKNLLDQTRVSTQNITRYSNNELTVNKESGIIKLHLPKNIRDKYKDFYLTMNIKRGDPDSNYTVSINQYHNHRLYNDSIYRTGISKVLYRSLPDKNGDITIQLSPKGKFNLELLELNGENYDTLKQAHHHANFNMRYKDIKNGVKVNLDHHSKGLAVINIPYRKGMRAYVDDRQSNIKKVNYMMTGVPVNKNDKTITIQYRPPFLKTMFSISIFSIVVSIVFIRLKNIRKRKMRIRHD
>NZ_CP014119.1|WP_001829495.1|1905374_1906238_+|ribosome-biogenesis-GTPase-YlqF
MAIQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDMTNLKELEKWEIYFKNEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFMIKHDVSALKRHYNIDTHEDAEILDWFDAIGRRRGLLQKGNEVDYESVIELIINDMRNAKIGTYCFDILKEMKSE
>NZ_CP014119.1|WP_001829514.1|1906242_1907013_+|ribonuclease-HII
MSLTIKEIKEKLSRIETLEELHKHEANNDSRKGVINAIKSREKNILKQQALEEHYLSMNQYENNIMSSNRDALICGIDEVGRGPLAGPVVACAVILEKNHHYIGLDDSKKVSPKNRARLNQNLKENVYQYAYGIASSVEIDELNIYRATQLAMLRAINQLDVTPTHLLIDAMTLDIDIPQTSIIKGDAKSVSIAAASIMAKEYRDQYMRQLSKQFPEYGFDKNAGYGTKQHLKAIDQVGIINEHRQSFEPIKSMMK
>NZ_CP014119.1|WP_002456569.1|1907120_1908287_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFKHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVKEA
>NZ_CP014119.1|WP_002446283.1|1908308_1909217_+|succinate--CoA-ligase-subunit-alpha
MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKENMNKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDAAKKAGIYEELLTIKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP014119_6	6.2\|1006523\|35\|NZ_CP014119\|PILER-CR,CRISPRCasFinder	1006523-1006557	35	NZ_CP014119.1	1441155-1441189	0	1.0
NZ_CP014119_2	2.1\|552131\|34\|NZ_CP014119\|CRISPRCasFinder	552131-552164	34	NZ_CP014119.1	2353878-2353911	2	0.941

1. spacer 6.2|1006523|35|NZ_CP014119|PILER-CR,CRISPRCasFinder matches to position: 1441155-1441189, mismatch: 0, identity: 1.0

ttggttttgtattaatacaacaatttgtgattagt	CRISPR spacer
ttggttttgtattaatacaacaatttgtgattagt	Protospacer
***********************************

2. spacer 2.1|552131|34|NZ_CP014119|CRISPRCasFinder matches to position: 2353878-2353911, mismatch: 2, identity: 0.941

tcggtgaaattctctttgttggggccccgaaccc	CRISPR spacer
tcagtgaaattctttttgttggggccccgaaccc	Protospacer
**.**********.********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014119_4	4.2\|959377\|34\|NZ_CP014119\|CRISPRCasFinder	959377-959410	34	NZ_CP009047	Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence	35247-35280	0	1.0
NZ_CP014119_5	5.4\|968561\|37\|NZ_CP014119\|CRISPRCasFinder,CRT	968561-968597	37	NC_024355	Staphylococcus phage 6ec, complete genome	89516-89552	0	1.0
NZ_CP014119_5	5.11\|969064\|36\|NZ_CP014119\|CRISPRCasFinder,CRT	969064-969099	36	NC_024355	Staphylococcus phage 6ec, complete genome	90721-90756	0	1.0
NZ_CP014119_5	5.14\|968562\|37\|NZ_CP014119\|PILER-CR	968562-968598	37	NC_024355	Staphylococcus phage 6ec, complete genome	89516-89552	0	1.0
NZ_CP014119_5	5.21\|969065\|36\|NZ_CP014119\|PILER-CR	969065-969100	36	NC_024355	Staphylococcus phage 6ec, complete genome	90721-90756	0	1.0
NZ_CP014119_5	5.6\|968705\|34\|NZ_CP014119\|CRISPRCasFinder,CRT	968705-968738	34	MH321490	Staphylococcus phage Quidividi, complete genome	6591-6624	1	0.971
NZ_CP014119_5	5.6\|968705\|34\|NZ_CP014119\|CRISPRCasFinder,CRT	968705-968738	34	MH321491	Staphylococcus phage Twillingate, complete genome	6786-6819	1	0.971
NZ_CP014119_5	5.6\|968705\|34\|NZ_CP014119\|CRISPRCasFinder,CRT	968705-968738	34	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	34184-34217	1	0.971
NZ_CP014119_5	5.8\|968848\|36\|NZ_CP014119\|CRISPRCasFinder,CRT	968848-968883	36	NC_024355	Staphylococcus phage 6ec, complete genome	87785-87820	1	0.972
NZ_CP014119_5	5.10\|968992\|36\|NZ_CP014119\|CRISPRCasFinder,CRT	968992-969027	36	NC_024355	Staphylococcus phage 6ec, complete genome	61784-61819	1	0.972
NZ_CP014119_5	5.10\|968992\|36\|NZ_CP014119\|CRISPRCasFinder,CRT	968992-969027	36	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	127739-127774	1	0.972
NZ_CP014119_5	5.16\|968706\|34\|NZ_CP014119\|PILER-CR	968706-968739	34	MH321490	Staphylococcus phage Quidividi, complete genome	6591-6624	1	0.971
NZ_CP014119_5	5.16\|968706\|34\|NZ_CP014119\|PILER-CR	968706-968739	34	MH321491	Staphylococcus phage Twillingate, complete genome	6786-6819	1	0.971
NZ_CP014119_5	5.16\|968706\|34\|NZ_CP014119\|PILER-CR	968706-968739	34	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	34184-34217	1	0.971
NZ_CP014119_5	5.18\|968849\|36\|NZ_CP014119\|PILER-CR	968849-968884	36	NC_024355	Staphylococcus phage 6ec, complete genome	87785-87820	1	0.972
NZ_CP014119_5	5.20\|968993\|36\|NZ_CP014119\|PILER-CR	968993-969028	36	NC_024355	Staphylococcus phage 6ec, complete genome	61784-61819	1	0.972
NZ_CP014119_5	5.20\|968993\|36\|NZ_CP014119\|PILER-CR	968993-969028	36	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	127739-127774	1	0.972
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MN369743	Streptomyces phage Tribute, complete genome	80738-80763	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MT310865	Streptomyces phage Bmoc, complete genome	78515-78540	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MH576968	Streptomyces phage Wofford, complete genome	80704-80729	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MF358542	Streptomyces phage Sushi23, complete genome	80852-80877	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MK494112	Streptomyces phage EGole, complete genome	81544-81569	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MF347639	Streptomyces phage Samisti12, complete genome	81875-81900	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	NC_042011	Streptomyces phage Peebs, complete genome	80496-80521	4	0.846
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	NZ_CP020749	Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence	9314-9339	5	0.808
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	200447-200472	5	0.808
NZ_CP014119_7	7.1\|1889027\|26\|NZ_CP014119\|CRISPRCasFinder	1889027-1889052	26	MF358541	Streptomyces phage Warpy, complete genome	80974-80999	5	0.808
NZ_CP014119_5	5.3\|968491\|34\|NZ_CP014119\|CRISPRCasFinder,CRT	968491-968524	34	MT932329	Campylobacter phage F379, complete genome	32835-32868	7	0.794
NZ_CP014119_5	5.13\|968492\|34\|NZ_CP014119\|PILER-CR	968492-968525	34	MT932329	Campylobacter phage F379, complete genome	32835-32868	7	0.794
NZ_CP014119_5	5.5\|968634\|35\|NZ_CP014119\|CRISPRCasFinder,CRT	968634-968668	35	NZ_CP014325	Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence	6768-6802	9	0.743
NZ_CP014119_5	5.5\|968634\|35\|NZ_CP014119\|CRISPRCasFinder,CRT	968634-968668	35	MN694039	Marine virus AFVG_250M632, complete genome	19686-19720	9	0.743
NZ_CP014119_5	5.15\|968635\|35\|NZ_CP014119\|PILER-CR	968635-968669	35	NZ_CP014325	Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence	6768-6802	9	0.743
NZ_CP014119_5	5.15\|968635\|35\|NZ_CP014119\|PILER-CR	968635-968669	35	MN694039	Marine virus AFVG_250M632, complete genome	19686-19720	9	0.743

1. spacer 4.2|959377|34|NZ_CP014119|CRISPRCasFinder matches to NZ_CP009047 (Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcaacgtgaaacttatattgaatggatagaaatg	CRISPR spacer
tcaacgtgaaacttatattgaatggatagaaatg	Protospacer
**********************************

2. spacer 5.4|968561|37|NZ_CP014119|CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 0, identity: 1.0

tagtaagtgatttacattatgacggcatagacgaaca	CRISPR spacer
tagtaagtgatttacattatgacggcatagacgaaca	Protospacer
*************************************

3. spacer 5.11|969064|36|NZ_CP014119|CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 0, identity: 1.0

aagtatatataatgtaatcatttttgttaccacctt	CRISPR spacer
aagtatatataatgtaatcatttttgttaccacctt	Protospacer
************************************

4. spacer 5.14|968562|37|NZ_CP014119|PILER-CR matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 0, identity: 1.0

tagtaagtgatttacattatgacggcatagacgaaca	CRISPR spacer
tagtaagtgatttacattatgacggcatagacgaaca	Protospacer
*************************************

5. spacer 5.21|969065|36|NZ_CP014119|PILER-CR matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 0, identity: 1.0

aagtatatataatgtaatcatttttgttaccacctt	CRISPR spacer
aagtatatataatgtaatcatttttgttaccacctt	Protospacer
************************************

6. spacer 5.6|968705|34|NZ_CP014119|CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

7. spacer 5.6|968705|34|NZ_CP014119|CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

8. spacer 5.6|968705|34|NZ_CP014119|CRISPRCasFinder,CRT matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

9. spacer 5.8|968848|36|NZ_CP014119|CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 1, identity: 0.972

gcgaaaagaatttaaaataattgttggctttcagaa	CRISPR spacer
gcgaaaagaatttaaaataattgttgactttcagaa	Protospacer
**************************.*********

10. spacer 5.10|968992|36|NZ_CP014119|CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 1, identity: 0.972

tgttggttggtatgtaattgagagtgtaggtttctt	CRISPR spacer
tgttggttggtatgtaattgagagtgtaggcttctt	Protospacer
******************************.*****

11. spacer 5.10|968992|36|NZ_CP014119|CRISPRCasFinder,CRT matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 1, identity: 0.972

tgttggttggtatgtaattgagagtgtaggtttctt	CRISPR spacer
tgttggttggtatgtaattgatagtgtaggtttctt	Protospacer
********************* **************

12. spacer 5.16|968706|34|NZ_CP014119|PILER-CR matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

13. spacer 5.16|968706|34|NZ_CP014119|PILER-CR matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

14. spacer 5.16|968706|34|NZ_CP014119|PILER-CR matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 1, identity: 0.971

tacagaaatgatttagggggcacaggttggcacc	CRISPR spacer
tacagaaatgatttagggggcacaggttggcatc	Protospacer
********************************.*

15. spacer 5.18|968849|36|NZ_CP014119|PILER-CR matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 1, identity: 0.972

gcgaaaagaatttaaaataattgttggctttcagaa	CRISPR spacer
gcgaaaagaatttaaaataattgttgactttcagaa	Protospacer
**************************.*********

16. spacer 5.20|968993|36|NZ_CP014119|PILER-CR matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 1, identity: 0.972

tgttggttggtatgtaattgagagtgtaggtttctt	CRISPR spacer
tgttggttggtatgtaattgagagtgtaggcttctt	Protospacer
******************************.*****

17. spacer 5.20|968993|36|NZ_CP014119|PILER-CR matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 1, identity: 0.972

tgttggttggtatgtaattgagagtgtaggtttctt	CRISPR spacer
tgttggttggtatgtaattgatagtgtaggtttctt	Protospacer
********************* **************

18. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MN369743 (Streptomyces phage Tribute, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcc	Protospacer
**.*********** ********* .

19. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MT310865 (Streptomyces phage Bmoc, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcg	Protospacer
**.*********** *********

20. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aaatgaggaacacaggagcttgagca	Protospacer
*** ********** *********

21. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MF358542 (Streptomyces phage Sushi23, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcc	Protospacer
**.*********** ********* .

22. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MK494112 (Streptomyces phage EGole, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcc	Protospacer
**.*********** ********* .

23. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MF347639 (Streptomyces phage Samisti12, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcc	Protospacer
**.*********** ********* .

24. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to NC_042011 (Streptomyces phage Peebs, complete genome) position: , mismatch: 4, identity: 0.846

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aagagaggaacacaggagcttgagcc	Protospacer
**.*********** ********* .

25. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to NZ_CP020749 (Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.808

aaaagaggaacacatgagcttgaggt	CRISPR spacer
tatcaaggaactcatgagcttgaggt	Protospacer
 *  .****** **************

26. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 5, identity: 0.808

aaaagaggaacacatgagcttgaggt	CRISPR spacer
tatcaaggaactcatgagcttgaggt	Protospacer
 *  .****** **************

27. spacer 7.1|1889027|26|NZ_CP014119|CRISPRCasFinder matches to MF358541 (Streptomyces phage Warpy, complete genome) position: , mismatch: 5, identity: 0.808

aaaagaggaacacatgagcttgaggt	CRISPR spacer
aaatgaggaacacaggagcttgaacc	Protospacer
*** ********** ********. .

28. spacer 5.3|968491|34|NZ_CP014119|CRISPRCasFinder,CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 7, identity: 0.794

actgaagaaagatgttattaattgggctattgaa	CRISPR spacer
attaaattcagatgtaattaaatgggctattgaa	Protospacer
*.*.**   ****** ***** ************

29. spacer 5.13|968492|34|NZ_CP014119|PILER-CR matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 7, identity: 0.794

actgaagaaagatgttattaattgggctattgaa	CRISPR spacer
attaaattcagatgtaattaaatgggctattgaa	Protospacer
*.*.**   ****** ***** ************

30. spacer 5.5|968634|35|NZ_CP014119|CRISPRCasFinder,CRT matches to NZ_CP014325 (Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence) position: , mismatch: 9, identity: 0.743

ataaaaaaattattaaaaaggatatgattgaaatg	CRISPR spacer
aagaaaaaattattaaaaaagatttgataaagaaa	Protospacer
* .****************.*** **** .*.* .

31. spacer 5.5|968634|35|NZ_CP014119|CRISPRCasFinder,CRT matches to MN694039 (Marine virus AFVG_250M632, complete genome) position: , mismatch: 9, identity: 0.743

ataaaaaaattattaaaaaggatatgattgaaatg---	CRISPR spacer
ataaaaaattttttaaaaaggatatagc---aatatac	Protospacer
******** ** *************...   ***.

32. spacer 5.15|968635|35|NZ_CP014119|PILER-CR matches to NZ_CP014325 (Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence) position: , mismatch: 9, identity: 0.743

ataaaaaaattattaaaaaggatatgattgaaatg	CRISPR spacer
aagaaaaaattattaaaaaagatttgataaagaaa	Protospacer
* .****************.*** **** .*.* .

33. spacer 5.15|968635|35|NZ_CP014119|PILER-CR matches to MN694039 (Marine virus AFVG_250M632, complete genome) position: , mismatch: 9, identity: 0.743

ataaaaaaattattaaaaaggatatgattgaaatg---	CRISPR spacer
ataaaaaattttttaaaaaggatatagc---aatatac	Protospacer
******** ** *************...   ***.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2667

uncultured_Caudovirales_phage(50.0%)

integrase

attL 1079:1092|attR 2988:3001

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456424.1\|687_1422_+	hypothetical protein	NA	NA	NA	NA
1079:1092	attL	NA	NA	NA	NA
WP_002456423.1\|1801_2014_-	hypothetical protein	A0A2H4JCA1	uncultured_Caudovirales_phage	7.3e-20	72.9
WP_002456422.1\|2172_2667_+\|integrase	site-specific integrase	B7T092	Staphylococcus_virus	3.8e-67	76.1
2988:3001	attR	NA	NA	NA	NA

DBSCAN-SWA_2

11473 : 12214

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829855.1\|11473_12214_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.0e-25	28.4

DBSCAN-SWA_3

20881 : 23969

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829805.1\|20881_21226_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.8e-06	30.6
WP_002485606.1\|21298_22429_-	DUF445 domain-containing protein	NA	NA	NA	NA
WP_001829807.1\|22610_23075_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001829810.1\|23345_23969_-	response regulator transcription factor	A0A1V0SGR9	Hokovirus	5.2e-05	28.2

DBSCAN-SWA_4

31335 : 36531

Staphylococcus_phage(66.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829854.1\|31335_31491_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	2.2e-13	75.0
WP_001829838.1\|31987_32710_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-34	41.5
WP_002440300.1\|32702_34160_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_002456347.1\|34398_35457_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_001829860.1\|35682_36531_-\|protease	serine protease	A0A2H4PQN3	Staphylococcus_phage	3.5e-20	31.9

DBSCAN-SWA_5

49926 : 53597

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830383.1\|49926_51663_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.3e-49	28.4
WP_001830384.1\|51904_52447_-	DUF402 domain-containing protein	NA	NA	NA	NA
WP_001830413.1\|52553_53597_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	2.1e-22	28.9

DBSCAN-SWA_6

66851 : 67481

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830439.1\|66851_67481_-	two-component system response regulator VraR	W8CYM9	Bacillus_phage	1.1e-05	27.4

DBSCAN-SWA_7

75767 : 80819

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830405.1\|75767_76322_+	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	2.3e-33	42.0
WP_001830390.1\|76352_77423_-	DNA polymerase IV	NA	NA	NA	NA
WP_001830365.1\|77732_78275_-	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_001830400.1\|78418_79789_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.5e-102	41.8
WP_001830377.1\|79868_80819_-	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.8e-17	27.1

DBSCAN-SWA_8

87712 : 98202

Bacillus_virus(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002440422.1\|87712_89710_-	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	1.2e-111	37.3
WP_002457083.1\|89713_91903_-	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-132	41.1
WP_001830396.1\|91899_92592_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_001830443.1\|92915_93218_-	hypothetical protein	NA	NA	NA	NA
WP_002440416.1\|93342_94638_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.1e-16	32.6
WP_001830380.1\|95049_95229_-	NETI motif-containing protein	NA	NA	NA	NA
WP_001830398.1\|95212_95839_-	DUF2179 domain-containing protein	NA	NA	NA	NA
WP_002455874.1\|95912_96740_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	7.2e-63	51.2
WP_001830368.1\|96732_98202_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.1e-109	46.2

DBSCAN-SWA_9

109038 : 110609

Salmonella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000733622.1\|109038_109884_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	4.4e-31	33.9
WP_000612779.1\|110198_110609_+	YolD-like family protein	U3PG23	Staphylococcus_phage	3.1e-30	53.5

DBSCAN-SWA_10

114466 : 115579

Streptococcus_pyogenes_phage(100.0%)

integrase

attL 108003:108017|attR 116186:116200

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
108003:108017	attL	NA	NA	NA	NA
WP_000706213.1\|114466_115579_-\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	1.7e-11	31.6
WP_000706213.1\|114466_115579_-\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	1.7e-11	31.6
116186:116200	attR	NA	NA	NA	NA

DBSCAN-SWA_11

121374 : 123822

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830444.1\|121374_122247_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	1.7e-25	34.3
WP_002457073.1\|122267_122927_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_002457072.1\|122907_123822_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-18	30.7

DBSCAN-SWA_12

128261 : 130221

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830447.1\|128261_129881_-	chaperonin GroEL	A0A240F779	uncultured_virus	4.4e-157	54.0
WP_001830378.1\|129936_130221_-	co-chaperone GroES	A0A221S386	uncultured_virus	1.5e-12	43.0

DBSCAN-SWA_13

136628 : 142449

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829999.1\|136628_137345_+	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	1.1e-27	33.9
WP_002457063.1\|137412_138372_-	carbohydrate kinase	NA	NA	NA	NA
WP_001830011.1\|138378_139851_-	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	3.6e-20	26.9
WP_002457062.1\|140110_141064_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001830014.1\|141198_142449_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	4.3e-35	29.7

DBSCAN-SWA_14

145685 : 150683

Bodo_saltans_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830004.1\|145685_147620_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	2.4e-48	27.2
WP_002457060.1\|147961_149578_+	AAA family ATPase	A0A1B1IS82	uncultured_Mediterranean_phage	2.5e-19	26.5
WP_001830015.1\|149660_150683_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.4e-62	39.9

DBSCAN-SWA_15

154401 : 159056

Micromonas_sp._RCC1109_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469370.1\|154401_156144_+	biosynthetic-type acetolactate synthase large subunit	E5EQ70	Micromonas_sp._RCC1109_virus	4.3e-65	30.9
WP_001830009.1\|156143_156377_+	ACT domain-containing protein	NA	NA	NA	NA
WP_002457057.1\|156493_157498_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_002469372.1\|157520_159056_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	3.4e-13	29.5

DBSCAN-SWA_16

172538 : 175893

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002440602.1\|172538_173309_-	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	4.1e-20	34.7
WP_002469585.1\|173283_173757_-	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001829952.1\|173758_174085_-	anti-sigma factor antagonist	NA	NA	NA	NA
WP_001829902.1\|174184_175186_-	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_001829891.1\|175530_175893_-	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	6.5e-08	33.6

DBSCAN-SWA_17

180485 : 182015

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002457112.1\|180485_182015_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	9.9e-58	34.2

DBSCAN-SWA_18

189084 : 189738

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829983.1\|189084_189738_+	HD domain-containing protein	H2ED17	Moumouvirus	1.0e-11	30.6

DBSCAN-SWA_19

195063 : 195459

Listeria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002457121.1\|195063_195459_-	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.4e-16	35.0

DBSCAN-SWA_20

205642 : 213488

Catovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002457123.1\|205642_206788_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	2.0e-26	28.7
WP_104832435.1\|206812_207442_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002457125.1\|207470_208709_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	8.2e-103	54.3
WP_001829927.1\|208733_209258_-	TIGR01440 family protein	NA	NA	NA	NA
WP_002457126.1\|209367_209787_-	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_001829923.1\|209783_210827_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	7.3e-44	37.9
WP_002440566.1\|210989_211826_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_001829940.1\|211812_212889_-	peptide chain release factor 1	NA	NA	NA	NA
WP_002457127.1\|212888_213488_-	thymidine kinase	G3MBK1	Bacillus_virus	1.9e-33	42.4

DBSCAN-SWA_21

221070 : 222678

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829895.1\|221070_222678_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.4e-149	50.4

DBSCAN-SWA_22

231455 : 234939

Geobacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002440546.1\|231455_232757_-	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	1.2e-133	58.6
WP_002495579.1\|232789_233452_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_002440540.1\|233658_234369_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_001829900.1\|234492_234939_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	1.1e-28	44.5

DBSCAN-SWA_23

240317 : 241271

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829912.1\|240317_241271_+	CDF family zinc efflux transporter CzrB	A0A1V0SED0	Indivirus	3.4e-24	27.3

DBSCAN-SWA_24

245203 : 247009

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829889.1\|245203_247009_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1H1Z3	Paramecium_bursaria_Chlorella_virus	1.7e-101	40.3

DBSCAN-SWA_25

267172 : 268138

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829779.1\|267172_268138_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	2.9e-15	29.3

DBSCAN-SWA_26

290957 : 296339

Orpheovirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829706.1\|290957_291698_+	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	1.8e-17	30.8
WP_095694446.1\|291959_292358_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002469355.1\|292371_292809_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_002456990.1\|293069_293873_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_002456989.1\|293876_294683_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_002456988.1\|294672_295533_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	4.3e-10	22.1
WP_002469356.1\|295529_296339_-	energy-coupling factor transporter ATPase	G3M9Y6	Bacillus_virus	4.2e-15	27.0

DBSCAN-SWA_27

311399 : 312734

Moraxella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829757.1\|311399_312734_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	8.7e-50	33.2

DBSCAN-SWA_28

319029 : 322185

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829753.1\|319029_322185_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.4e-66	22.8

DBSCAN-SWA_29

334361 : 334982

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438505.1\|334361_334982_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	7.9e-22	36.1

DBSCAN-SWA_30

358919 : 362297

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832639.1\|358919_359873_+	2-hydroxyacid dehydrogenase family protein	A0A1V0SBV6	Catovirus	1.2e-32	31.0
WP_002438467.1\|360013_361138_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_001832638.1\|361520_362297_-	glucosaminidase domain-containing protein	H9A0W8	Staphylococcus_phage	8.4e-37	39.4

DBSCAN-SWA_31

374666 : 375845

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832439.1\|374666_375845_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.7e-60	37.0

DBSCAN-SWA_32

380069 : 380951

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456633.1\|380069_380951_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	4.4e-58	44.2

DBSCAN-SWA_33

404683 : 405895

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831540.1\|404683_405895_-	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	3.6e-34	27.5

DBSCAN-SWA_34

409440 : 411967

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456638.1\|409440_410109_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.5e-37	39.9
WP_002456639.1\|410108_411161_-	ABC transporter permease	NA	NA	NA	NA
WP_001831555.1\|411292_411967_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-54	47.9

DBSCAN-SWA_35

421157 : 423323

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456644.1\|421157_423323_-	bifunctional glycosyltransferase family 2 protein/CDP-glycerol:glycerophosphate glycerophosphotransferase	A0A1V0SAH6	Catovirus	4.3e-06	38.7

DBSCAN-SWA_36

445326 : 446880

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438317.1\|445326_446880_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_37

457541 : 457697

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831613.1\|457541_457697_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	1.3e-10	71.4

DBSCAN-SWA_38

463759 : 464781

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831527.1\|463759_463906_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	8.6e-12	71.4
WP_001831593.1\|464049_464781_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-29	38.7

DBSCAN-SWA_39

471033 : 472188

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456652.1\|471033_472188_+	glycerate kinase	W6LM47	Streptococcus_phage	5.8e-50	39.5

DBSCAN-SWA_40

480118 : 481636

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831582.1\|480118_481636_+	serine hydrolase FLP	A0A2P1K0A5	Mycobacterium_phage	6.1e-07	23.0

DBSCAN-SWA_41

485935 : 487711

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831559.1\|485935_487711_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.6e-65	30.9

DBSCAN-SWA_42

492223 : 495022

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831407.1\|492223_493480_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.7e-21	53.8
WP_002438246.1\|493969_495022_+	2,3-butanediol dehydrogenase	A0A2K9L7I1	Tupanvirus	3.4e-09	21.2

DBSCAN-SWA_43

501141 : 501804

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831406.1\|501141_501804_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.0e-18	36.0

DBSCAN-SWA_44

507062 : 507881

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438224.1\|507062_507881_-	SDR family oxidoreductase	A0A0G2Y924	Acanthamoeba_polyphaga_mimivirus	1.5e-07	35.1

DBSCAN-SWA_45

513465 : 523224

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456667.1\|513465_514158_-	SDR family oxidoreductase	A0A0K0KVL6	Prochlorococcus_phage	9.2e-11	27.6
WP_001831457.1\|514927_515119_-	hypothetical protein	NA	NA	NA	NA
WP_002469554.1\|515269_518128_-	DEAD/DEAH box helicase	Q5YA94	Bacillus_phage	1.6e-24	26.3
WP_002469548.1\|518129_518522_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_002469545.1\|518795_520286_-	glycosyltransferase	NA	NA	NA	NA
WP_002456673.1\|520503_522144_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.1e-97	38.5
WP_002456674.1\|522357_523224_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.7e-78	51.9

DBSCAN-SWA_46

555651 : 556644

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456690.1\|555651_556644_+	D-lactate dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	2.3e-39	30.7

DBSCAN-SWA_47

559830 : 561397

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469549.1\|559830_559986_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	3.7e-13	75.5
WP_104832443.1\|560218_561397_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	2.3e-62	38.0

DBSCAN-SWA_48

575754 : 584331

Acanthamoeba_polyphaga_mimivirus(25.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832376.1\|575754_576735_-	alpha/beta hydrolase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	2.4e-12	23.7
WP_001832362.1\|576817_577666_-	YitT family protein	NA	NA	NA	NA
WP_001832372.1\|577848_578175_-	thioredoxin family protein	NA	NA	NA	NA
WP_001832329.1\|578397_579450_+	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	8.5e-16	27.0
WP_001832343.1\|579514_580282_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_104832443.1\|580820_581999_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	2.3e-62	38.0
WP_001832339.1\|582303_584331_-	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	2.1e-07	43.3

DBSCAN-SWA_49

592752 : 593271

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456694.1\|592752_593271_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.0e-22	39.8

DBSCAN-SWA_50

598981 : 610163

Trichoplusia_ni_ascovirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832349.1\|598981_599851_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	3.9e-51	41.8
WP_001832327.1\|600053_600260_+	hypothetical protein	NA	NA	NA	NA
WP_002456697.1\|600496_602881_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	9.5e-124	40.5
WP_001832344.1\|603012_603219_+	copper chaperone CopZ	NA	NA	NA	NA
WP_002456698.1\|603272_604271_-	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	8.2e-37	31.4
WP_001832328.1\|604283_605444_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_002440903.1\|605770_606544_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_002438073.1\|607142_608951_-	acetyltransferase	B5WZU0	Pseudomonas_phage	1.1e-34	30.1
WP_002438072.1\|609455_610163_-	transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	2.1e-31	41.1

DBSCAN-SWA_51

617927 : 618083

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830677.1\|617927_618083_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	2.6e-14	77.6

DBSCAN-SWA_52

623359 : 624178

Ostreococcus_lucimarinus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830671.1\|623359_624178_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	M4QNT1	Ostreococcus_lucimarinus_virus	2.1e-38	36.0

DBSCAN-SWA_53

632852 : 634190

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830675.1\|632852_634190_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	2.5e-20	26.1

DBSCAN-SWA_54

639240 : 640131

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830665.1\|639240_640131_+	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	7.2e-08	29.2

DBSCAN-SWA_55

644109 : 664932

Vibrio_phage(25.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830624.1\|644109_646737_-	pyruvate, phosphate dikinase	A0A2I7RQW7	Vibrio_phage	4.6e-87	40.5
WP_001830656.1\|647084_648680_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	1.4e-75	36.2
WP_001830617.1\|649016_649463_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_001830634.1\|649490_649709_-	sterile alpha motif-like domain-containing protein	NA	NA	NA	NA
WP_001830632.1\|650155_651331_-	amidohydrolase	NA	NA	NA	NA
WP_001830593.1\|651652_653371_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.5e-59	33.1
WP_001830602.1\|653530_655021_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001830608.1\|655492_656056_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_104832445.1\|656102_657725_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.7e-21	22.6
WP_001830664.1\|658145_659444_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_002438021.1\|659807_660344_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	3.7e-36	47.4
WP_002438017.1\|660340_662191_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	6.0e-243	65.5
WP_002438015.1\|662509_662815_-	hypothetical protein	NA	NA	NA	NA
WP_002438013.1\|663138_663738_-	adenylyl-sulfate kinase	A0A2K9L4R9	Tupanvirus	1.3e-26	44.6
WP_002456703.1\|663753_664932_-	sulfate adenylyltransferase	A0A2P1ELS9	Moumouvirus	5.0e-49	31.6

DBSCAN-SWA_56

671242 : 671974

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830661.1\|671242_671974_-	phosphoadenylyl-sulfate reductase	M4W6M9	Bacillus_phage	1.1e-09	23.5

DBSCAN-SWA_57

679439 : 681032

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456714.1\|679439_681032_-	solute:sodium symporter family transporter	A0A240F3J2	Aeromonas_phage	1.7e-44	29.2

DBSCAN-SWA_58

684262 : 685012

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456717.1\|684262_685012_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-29	36.4

DBSCAN-SWA_59

693563 : 694901

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469598.1\|693563_694901_-	poly-gamma-glutamate hydrolase family protein	A0A0D3MVF0	Staphylococcus_phage	1.0e-45	45.6

DBSCAN-SWA_60

699701 : 706823

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456728.1\|699701_700688_-	ADP-ribosylglycohydrolase family protein	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	4.7e-08	22.2
WP_002456729.1\|701681_702113_+	universal stress protein	NA	NA	NA	NA
WP_002456730.1\|702472_703090_+	CadD family cadmium resistance transporter	NA	NA	NA	NA
WP_002456731.1\|703108_703456_+	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	3.5e-11	34.0
WP_107505521.1\|703616_703709_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_002499090.1\|704291_704441_-	metallothionein	NA	NA	NA	NA
WP_002469035.1\|704457_704802_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104832446.1\|704873_706823_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.5e-148	46.4

DBSCAN-SWA_61

714656 : 723446

uncultured_Caudovirales_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002455808.1\|714656_716108_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.7e-120	50.7
WP_000873698.1\|716221_716764_+	recombinase family protein	NA	NA	NA	NA
WP_002456739.1\|717231_717810_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.1e-41	51.7
WP_001832528.1\|718967_719450_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.1e-18	35.4
WP_001831825.1\|719665_720112_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002456741.1\|720283_721933_+	alpha-keto acid decarboxylase family protein	NA	NA	NA	NA
WP_001831857.1\|722279_723446_-	CapA family protein	A0A2H4JG01	uncultured_Caudovirales_phage	3.0e-107	49.9

DBSCAN-SWA_62

747612 : 749580

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831881.1\|747612_749580_+	amidase domain-containing protein	A0A0A7RUS8	Clostridium_phage	4.0e-11	36.3

DBSCAN-SWA_63

753344 : 753500

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831859.1\|753344_753500_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	2.0e-11	70.8

DBSCAN-SWA_64

779108 : 779882

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832011.1\|779108_779882_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-27	37.6

DBSCAN-SWA_65

786476 : 787655

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832450.1\|786476_787655_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2

DBSCAN-SWA_66

791521 : 792157

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829420.1\|791521_792157_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	7.4e-15	26.9

DBSCAN-SWA_67

807630 : 815332

Vibrio_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002495210.1\|807630_809223_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.6e-18	21.4
WP_001829442.1\|809387_809900_-	hypothetical protein	NA	NA	NA	NA
WP_001830507.1\|810175_810331_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	4.7e-16	81.6
WP_001830479.1\|810582_811860_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_001830482.1\|811873_812914_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_001830565.1\|812984_813938_-	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	E3SJ83	Synechococcus_phage	2.1e-13	28.7
WP_001830471.1\|813979_815332_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-34	28.5

DBSCAN-SWA_68

826707 : 833871

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830461.1\|826707_833871_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	3.5e-153	26.8

DBSCAN-SWA_69

845550 : 845979

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830531.1\|845550_845979_-	FosB family fosfomycin resistance bacillithiol transferase	Q2LI91	Bacillus_phage	7.1e-30	55.2

DBSCAN-SWA_70

853183 : 855003

Bacillus_virus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456313.1\|853183_853819_-	ABC transporter permease	G3M9Y4	Bacillus_virus	2.5e-07	25.6
WP_001830513.1\|853815_855003_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-19	32.9

DBSCAN-SWA_71

862469 : 868216

Tetraselmis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830559.1\|862469_864716_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-182	44.2
WP_001830562.1\|865456_866647_-	MFS transporter	NA	NA	NA	NA
WP_001830579.1\|866658_867408_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-14	26.5
WP_001830532.1\|867400_868216_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-09	25.1

DBSCAN-SWA_72

875259 : 881441

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830566.1\|875259_875949_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.5e-25	33.2
WP_001830577.1\|876076_876850_-	acetoin reductase	NA	NA	NA	NA
WP_002437731.1\|877018_878395_-	MFS transporter	NA	NA	NA	NA
WP_002437728.1\|878423_881441_-	NADH-dependent flavin oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	8.7e-199	57.4

DBSCAN-SWA_73

901159 : 902293

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456777.1\|901159_902293_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	D2TEZ5	Emiliania_huxleyi_virus	1.3e-22	24.9

DBSCAN-SWA_74

911552 : 916011

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469224.1\|911552_912404_-	trypsin-like peptidase domain-containing protein	A0A2H4PQP1	Staphylococcus_phage	6.4e-06	29.3
WP_002456782.1\|912967_913309_+	hypothetical protein	NA	NA	NA	NA
WP_002437673.1\|913501_914476_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_002469221.1\|914472_916011_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.2e-14	26.6

DBSCAN-SWA_75

920793 : 921561

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002437663.1\|920793_921561_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.0e-18	32.4

DBSCAN-SWA_76

937262 : 939283

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002467638.1\|937262_937577_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	6.2e-31	59.6
WP_002469220.1\|937579_938869_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	4.3e-187	81.6
WP_002456800.1\|938887_939283_+	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	3.2e-61	84.0

DBSCAN-SWA_77

943951 : 947702

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456804.1\|943951_946012_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.6e-66	30.1
WP_104832452.1\|946523_947702_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	7.4e-61	37.2

DBSCAN-SWA_78

952398 : 956503

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002458482.1\|952398_953064_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.3e-25	34.8
WP_002469394.1\|953144_953756_-	hypothetical protein	NA	NA	NA	NA
WP_002469424.1\|953721_954843_-	ABC transporter permease	NA	NA	NA	NA
WP_002469405.1\|954817_955723_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-23	34.4
WP_089424035.1\|956044_956503_+	radical SAM protein	R9TGT5	Vibrio_phage	6.5e-05	28.2

DBSCAN-SWA_79

976771 : 981395

Liberibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002505430.1\|976771_979801_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.7e-13	23.7
WP_002470059.1\|979973_980180_-	hypothetical protein	NA	NA	NA	NA
WP_002469410.1\|980759_981395_-	ATP-binding cassette domain-containing protein	A0A1J0FA64	Only_Syngen_Nebraska_virus	4.3e-07	27.6

DBSCAN-SWA_80

997160 : 1003805

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032601514.1\|997160_999182_-	K(+)-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	9.5e-32	23.5
WP_002505145.1\|999200_1000883_-	potassium-transporting ATPase subunit A	NA	NA	NA	NA
WP_001830720.1\|1000903_1000984_-	potassium-transporting ATPase subunit F	NA	NA	NA	NA
WP_001830698.1\|1001150_1003805_+	sensor histidine kinase KdpD	A0A2K9L5I4	Tupanvirus	2.9e-12	24.4

DBSCAN-SWA_81

1009247 : 1015093

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469396.1\|1009247_1010744_+	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	2.5e-53	31.0
WP_002469391.1\|1010733_1011990_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_002469414.1\|1011973_1015093_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.3e-75	31.3

DBSCAN-SWA_82

1032814 : 1035814

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000815640.1\|1032814_1034164_+	recombinase family protein	Q9T200	Bacillus_phage	1.4e-18	24.8
WP_001186608.1\|1034185_1035814_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	5.4e-46	31.4

DBSCAN-SWA_83

1049774 : 1059877

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002447628.1\|1049774_1050575_-	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	2.9e-40	36.4
WP_002456806.1\|1051193_1051985_-	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_001831744.1\|1051985_1053323_-	YycH family regulatory protein	NA	NA	NA	NA
WP_002437327.1\|1053315_1055148_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.4
WP_001831816.1\|1055160_1055862_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.0e-42	39.2
WP_002455931.1\|1056914_1058198_-	adenylosuccinate synthase	L7Y4J5	Megavirus	1.0e-68	34.8
WP_001831779.1\|1058476_1059877_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	2.2e-112	48.9

DBSCAN-SWA_84

1066321 : 1075823

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469430.1\|1066321_1067305_+	sphingomyelin phosphodiesterase	A0A1P8L6H7	Staphylococcus_phage	5.4e-81	52.2
WP_002455928.1\|1067834_1069121_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.2e-88	52.2
WP_001831762.1\|1069966_1070782_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_002469440.1\|1071173_1073855_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	6.5e-121	36.4
WP_001831817.1\|1073891_1075823_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	3.2e-146	46.0

DBSCAN-SWA_85

1086031 : 1092192

Gordonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831794.1\|1086031_1086871_+	nucleoid occlusion protein	A0A1C9EHY8	Gordonia_phage	4.7e-09	33.1
WP_001831810.1\|1087271_1087631_+	DUF3147 family protein	NA	NA	NA	NA
WP_001831775.1\|1087646_1088042_+	DUF3147 family protein	NA	NA	NA	NA
WP_001831797.1\|1088007_1088547_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002456812.1\|1088766_1089336_+	helix-turn-helix transcriptional regulator	D2XQ11	Bacillus_virus	2.5e-06	31.8
WP_002456813.1\|1089523_1090153_-	YIP1 family protein	NA	NA	NA	NA
WP_001831820.1\|1090390_1091509_+	RND transporter	NA	NA	NA	NA
WP_001831756.1\|1091505_1092192_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-33	37.6

DBSCAN-SWA_86

1099252 : 1100011

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831790.1\|1099252_1100011_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-34	37.6

DBSCAN-SWA_87

1115077 : 1115920

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002437236.1\|1115077_1115920_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	4.1e-05	25.5

DBSCAN-SWA_88

1124415 : 1133145

Pandoravirus(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002455910.1\|1124415_1125591_-	PLP-dependent transferase	A0A0B5JD48	Pandoravirus	1.8e-14	26.2
WP_001831348.1\|1125587_1126691_-	PLP-dependent transferase	A0A0B5JD48	Pandoravirus	1.0e-11	25.8
WP_002455909.1\|1127419_1128262_+	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	9.5e-10	28.7
WP_001832526.1\|1128416_1129292_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_001831361.1\|1129312_1129516_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_001831336.1\|1129527_1130625_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_001831355.1\|1130857_1131049_-	hypothetical protein	U3PCX8	Staphylococcus_phage	4.4e-24	83.3
WP_002455908.1\|1131122_1131932_-	lysozyme	NA	NA	NA	NA
WP_001831345.1\|1132316_1132613_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_001831333.1\|1132635_1133145_+	single-stranded DNA-binding protein	A0A2H4JCF2	uncultured_Caudovirales_phage	4.8e-65	90.5

DBSCAN-SWA_89

1138249 : 1139773

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002437172.1\|1138249_1139773_-	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	7.1e-40	33.4

DBSCAN-SWA_90

1149004 : 1155138

Klosneuvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829407.1\|1149004_1150471_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.7e-94	39.8
WP_002468031.1\|1150637_1152179_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.6e-23	32.6
WP_002437151.1\|1152419_1153325_-	Abi family protein	NA	NA	NA	NA
WP_001829365.1\|1154583_1155138_-	hypothetical protein	A0A1J0MFV9	Staphylococcus_phage	2.9e-07	53.6

DBSCAN-SWA_91

1160729 : 1160993

Staphylococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832458.1\|1160729_1160993_-	hypothetical protein	Q4ZCB7	Staphylococcus_virus	1.3e-10	46.2

DBSCAN-SWA_92

1171424 : 1177793

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829369.1\|1171424_1172333_+	cysteine synthase family protein	A0A1X9I5F1	Streptococcus_phage	7.7e-50	39.1
WP_001829386.1\|1172325_1173471_+	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA
WP_001832450.1\|1173717_1174743_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-31	37.7
WP_001829353.1\|1174745_1175405_+	ABC transporter permease	NA	NA	NA	NA
WP_002469437.1\|1175448_1176294_+	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_001829380.1\|1176818_1177793_+	autolysin/adhesin Aae	Q6A204	Oenococcus_phage	6.2e-21	41.8

DBSCAN-SWA_93

1194164 : 1195871

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829412.1\|1194164_1195871_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.1e-54	41.2

DBSCAN-SWA_94

1204958 : 1212417

Streptococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832211.1\|1204958_1205570_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.1e-47	48.3
WP_001832200.1\|1205603_1205933_+	cyclic-di-AMP receptor	NA	NA	NA	NA
WP_001832202.1\|1206238_1207165_+	DNA polymerase III subunit delta'	A0A292GC45	Xanthomonas_phage	1.8e-06	31.9
WP_001832240.1\|1207166_1207970_+	stage 0 sporulation family protein	NA	NA	NA	NA
WP_001832238.1\|1207986_1208334_+	DNA replication initiation control protein YabA	NA	NA	NA	NA
WP_002457100.1\|1208429_1209155_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_001832208.1\|1209147_1209396_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_104832455.1\|1209397_1210237_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.6e-57	44.8
WP_002457101.1\|1210446_1212417_+\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	3.4e-95	32.1

DBSCAN-SWA_95

1218680 : 1221145

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832214.1\|1218680_1220036_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	4.4e-25	31.4
WP_001832233.1\|1220179_1221145_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	2.6e-48	36.7

DBSCAN-SWA_96

1231778 : 1240859

uncultured_virus(20.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832216.1\|1231778_1232318_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	1.0e-12	29.8
WP_001832199.1\|1232592_1234695_+\|protease	ATP-dependent zinc metalloprotease FtsH	H8ZJI5	Ostreococcus_tauri_virus	4.9e-108	48.8
WP_001832190.1\|1234949_1235831_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_001832242.1\|1236167_1237100_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.2e-107	63.9
WP_002457105.1\|1237394_1238213_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	6.8e-21	30.5
WP_001832204.1\|1238190_1238556_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_001832213.1\|1238556_1239036_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_001833056.1\|1239371_1240859_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	5.8e-95	39.8

DBSCAN-SWA_97

1252700 : 1257218

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469332.1\|1252700_1254065_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	9.9e-17	24.7
WP_001830030.1\|1254161_1255049_+	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_011082818.1\|1255051_1255609_+	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_104832450.1\|1256039_1257218_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2

DBSCAN-SWA_98

1260919 : 1263373

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002445729.1\|1260919_1263373_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1C3S747	Escherichia_phage	1.2e-134	41.2

DBSCAN-SWA_99

1269199 : 1273988

Catovirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456841.1\|1269199_1270600_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	7.0e-58	31.6
WP_002469321.1\|1270604_1270991_+	Mini-ribonuclease 3	NA	NA	NA	NA
WP_002494715.1\|1270998_1271748_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_001832317.1\|1271744_1272272_+	NYN domain-containing protein	NA	NA	NA	NA
WP_002445734.1\|1272341_1272917_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_001832285.1\|1273040_1273184_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_002438679.1\|1273246_1273429_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001832303.1\|1273439_1273988_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	6.6e-12	32.9

DBSCAN-SWA_100

1277846 : 1288987

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001833083.1\|1277846_1281398_+	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	8.0e-50	24.2
WP_002445736.1\|1281556_1285153_+	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	8.0e-66	24.7
WP_001832275.1\|1285480_1285741_+	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA
WP_001833079.1\|1285831_1286245_+	30S ribosomal protein S12	NA	NA	NA	NA
WP_001137495.1\|1286315_1286786_+	30S ribosomal protein S7	NA	NA	NA	NA
WP_001832287.1\|1286905_1288987_+	elongation factor G	E4ZFJ7	Streptococcus_phage	3.8e-68	28.6

DBSCAN-SWA_101

1293019 : 1293970

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438698.1\|1293019_1293970_+	ornithine cyclodeaminase family protein	A0A1V0SL93	Klosneuvirus	3.1e-17	29.4

DBSCAN-SWA_102

1304361 : 1305024

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832291.1\|1304361_1305024_-	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	2.3e-19	33.9

DBSCAN-SWA_103

1317393 : 1318572

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832459.1\|1317393_1318572_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.3e-61	37.2

DBSCAN-SWA_104

1328109 : 1331437

Elephant_endotheliotropic_herpesvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456854.1\|1328109_1328760_+	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	4.7e-41	43.4
WP_001832078.1\|1328769_1329129_+	DUF5327 family protein	NA	NA	NA	NA
WP_002494334.1\|1329153_1329522_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_001832531.1\|1329637_1331128_+	APC family permease	NA	NA	NA	NA
WP_002470762.1\|1331281_1331437_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	3.6e-16	83.7

DBSCAN-SWA_105

1340845 : 1342177

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456011.1\|1340845_1342177_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	5.9e-107	47.4

DBSCAN-SWA_106

1348938 : 1351928

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832122.1\|1348938_1349613_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.2e-125	97.3
WP_001832180.1\|1350061_1350538_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001832138.1\|1350629_1351928_+	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	5.5e-25	30.9

DBSCAN-SWA_107

1356956 : 1360249

Tupanvirus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002445783.1\|1356956_1357979_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	1.6e-35	28.6
WP_002445784.1\|1358061_1358454_+	hypothetical protein	NA	NA	NA	NA
WP_104832450.1\|1359070_1360249_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2

DBSCAN-SWA_108

1370270 : 1371047

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832174.1\|1370270_1371047_+	alpha/beta hydrolase	A0A1D8EVD1	Mycobacterium_phage	8.4e-05	28.2

DBSCAN-SWA_109

1394571 : 1405162

Streptomyces_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001833002.1\|1394571_1394970_+	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	2.9e-17	39.9
WP_001832157.1\|1395953_1397681_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-102	40.4
WP_002493541.1\|1397966_1399196_+	nucleoside permease	NA	NA	NA	NA
WP_001832123.1\|1399732_1400566_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.3e-43	37.3
WP_001832050.1\|1400924_1401722_+	ABC transporter ATP-binding protein	A0A1V0SJ29	Klosneuvirus	9.2e-15	31.2
WP_001832127.1\|1402041_1402542_+	hypothetical protein	NA	NA	NA	NA
WP_001832177.1\|1402766_1403834_+	membrane protein	NA	NA	NA	NA
WP_002438830.1\|1404112_1405162_+	alpha/beta hydrolase	A0A0G2Y6Q1	Acanthamoeba_polyphaga_mimivirus	4.9e-16	23.3

DBSCAN-SWA_110

1409132 : 1409894

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001833013.1\|1409132_1409894_+	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.2e-19	30.7

DBSCAN-SWA_111

1419879 : 1420356

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832058.1\|1419879_1420356_+	cupin domain-containing protein	A0A291ATU0	Pandoravirus	1.7e-16	37.5

DBSCAN-SWA_112

1429388 : 1429955

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832158.1\|1429388_1429955_-	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	4.7e-21	35.2

DBSCAN-SWA_113

1433124 : 1436450

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002455988.1\|1433124_1434759_+	ABC transporter ATP-binding protein/permease	F2Y2R6	Organic_Lake_phycodnavirus	1.8e-17	28.7
WP_002438857.1\|1434755_1436450_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	2.2e-13	23.6

DBSCAN-SWA_114

1441553 : 1442927

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832462.1\|1441553_1442927_+	deoxyribodipyrimidine photo-lyase	A0A2H4UV63	Bodo_saltans_virus	2.1e-46	36.6

DBSCAN-SWA_115

1454031 : 1464567

Staphylococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830355.1\|1454031_1454871_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-60	43.0
WP_001830351.1\|1455073_1456180_+	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	6.3e-62	43.2
WP_025987135.1\|1456249_1457302_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.0e-17	30.6
WP_001830352.1\|1457304_1457994_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-34	35.2
WP_001830332.1\|1457968_1458442_-	DoxX family protein	NA	NA	NA	NA
WP_104832463.1\|1458492_1458930_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_001830315.1\|1459525_1459681_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	9.8e-14	75.5
WP_001830331.1\|1460030_1460630_-	hypothetical protein	NA	NA	NA	NA
WP_001830330.1\|1460732_1461446_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.6e-55	44.8
WP_001830341.1\|1461446_1461866_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_001830328.1\|1461870_1462542_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	4.1e-64	55.7
WP_001830349.1\|1462838_1463426_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001830323.1\|1463415_1464567_+	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	7.5e-26	39.6

DBSCAN-SWA_116

1467725 : 1481338

Streptococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830354.1\|1467725_1469666_+	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	3.0e-107	38.5
WP_104832450.1\|1470341_1471520_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2
WP_001829605.1\|1472118_1472934_-	ZIP family metal transporter	NA	NA	NA	NA
WP_171004438.1\|1473055_1474945_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.4e-55	30.2
WP_086886647.1\|1474955_1476737_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	1.0e-77	37.1
WP_002438891.1\|1476936_1477911_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.0e-24	31.0
WP_002438893.1\|1477903_1479418_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_001829653.1\|1479620_1480676_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	1.6e-22	26.8
WP_001832599.1\|1480798_1481338_+	5'-3'-deoxyribonucleotidase	A0A0A0PKY7	Bacillus_phage	1.1e-30	40.7

DBSCAN-SWA_117

1485990 : 1496424

uncultured_Caudovirales_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438897.1\|1485990_1487496_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	34.0
WP_001832596.1\|1487779_1488280_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
WP_001829684.1\|1488293_1489169_-	DMT family transporter	NA	NA	NA	NA
WP_001829589.1\|1489923_1490322_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
WP_001829582.1\|1490284_1492390_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	100.0
WP_001829597.1\|1492508_1493477_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.9e-185	100.0
WP_002456931.1\|1493451_1493715_+	hypothetical protein	A0A2H4IYB4	uncultured_Caudovirales_phage	5.5e-17	100.0
WP_002438902.1\|1493730_1494705_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.9e-165	99.7
WP_002438903.1\|1494688_1495648_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	4.1e-17	100.0
WP_001829596.1\|1495644_1496424_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6

DBSCAN-SWA_118

1507857 : 1510916

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829639.1\|1507857_1508499_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.1e-38	48.3
WP_001829661.1\|1508643_1509510_+	DegV family protein	NA	NA	NA	NA
WP_171004420.1\|1509647_1510916_+	DEAD/DEAH box helicase family protein	A0A1X9I5S6	Streptococcus_phage	3.5e-48	35.3

DBSCAN-SWA_119

1517064 : 1517865

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829621.1\|1517064_1517865_+	CHAP domain-containing protein	A0A173GBC8	Staphylococcus_phage	5.6e-12	44.6

DBSCAN-SWA_120

1521603 : 1524438

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832465.1\|1521603_1524438_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	58.2

DBSCAN-SWA_121

1528573 : 1533570

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832466.1\|1528573_1529506_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	5.4e-83	48.6
WP_001829594.1\|1529681_1530590_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.6e-07	33.6
WP_001829626.1\|1530589_1531585_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	2.6e-51	39.8
WP_002438915.1\|1531713_1532658_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.4e-54	40.6
WP_001829659.1\|1532985_1533570_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.1e-52	54.7

DBSCAN-SWA_122

1543212 : 1553043

Staphylococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829595.1\|1543212_1544517_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	4.3e-195	80.3
WP_001829646.1\|1544682_1545141_+	hypothetical protein	NA	NA	NA	NA
WP_001829669.1\|1545209_1545443_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_001829672.1\|1545743_1546484_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_002438919.1\|1546518_1548897_+	ribonuclease R	Q0GXV6	Lactococcus_phage	6.2e-91	38.6
WP_001829588.1\|1548921_1549392_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.4e-71	88.5
WP_002438942.1\|1549941_1550172_-	hypothetical protein	NA	NA	NA	NA
WP_001829655.1\|1550781_1550961_+	hypothetical protein	NA	NA	NA	NA
WP_001832592.1\|1551104_1551647_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	1.8e-25	54.5
WP_001829642.1\|1552381_1552552_+	hypothetical protein	NA	NA	NA	NA
WP_001829658.1\|1552809_1553043_-	hypothetical protein	Q4ZCB8	Staphylococcus_virus	1.0e-22	64.9

DBSCAN-SWA_123

1558458 : 1562964

Indivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829688.1\|1558458_1559400_+	cation transporter	A0A1V0SED0	Indivirus	1.1e-11	33.6
WP_095658922.1\|1559797_1559872_-	epsilon family phenol-soluble modulin	NA	NA	NA	NA
WP_001829681.1\|1560765_1560966_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.0e-19	69.2
WP_001829613.1\|1561586_1561811_-	hypothetical protein	NA	NA	NA	NA
WP_001829635.1\|1561834_1562119_-	hypothetical protein	NA	NA	NA	NA
WP_002438959.1\|1562217_1562964_-	poly-gamma-glutamate hydrolase family protein	A0A2H4IZ42	uncultured_Caudovirales_phage	6.6e-39	42.2

DBSCAN-SWA_124

1567784 : 1575343

Streptococcus_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832443.1\|1567784_1568963_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	2.3e-62	38.0
WP_001829648.1\|1569312_1569468_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	3.0e-15	79.6
WP_002469344.1\|1569651_1570074_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_002456940.1\|1570234_1570951_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	3.7e-15	29.7
WP_001831981.1\|1571031_1571574_+	nitroreductase	NA	NA	NA	NA
WP_001831907.1\|1571756_1572080_-	thioredoxin family protein	NA	NA	NA	NA
WP_001831965.1\|1572222_1572576_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.6e-19	45.9
WP_002438979.1\|1572749_1573130_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_001831968.1\|1573389_1573776_+	topiosmerase	NA	NA	NA	NA
WP_001831936.1\|1573768_1574065_+	thioredoxin family protein	NA	NA	NA	NA
WP_001831992.1\|1574317_1575343_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-26	37.9

DBSCAN-SWA_125

1578905 : 1582378

Brazilian_cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831944.1\|1578905_1579667_+	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	8.5e-10	28.3
WP_001831898.1\|1579761_1581069_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_001831952.1\|1581136_1582378_+	cysteine desulfurase	Q2XUY6	environmental_halophage	9.1e-110	43.8

DBSCAN-SWA_126

1587149 : 1587998

Golden_Marseillevirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831962.1\|1587149_1587998_+	DUF72 domain-containing protein	A0A1D6Y809	Golden_Marseillevirus	5.4e-13	25.9

DBSCAN-SWA_127

1595059 : 1597728

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831977.1\|1595059_1596517_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	2.1e-41	27.5
WP_002439035.1\|1596513_1597728_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	4.5e-21	28.0

DBSCAN-SWA_128

1601989 : 1605628

Lake_Baikal_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832002.1\|1601989_1602349_+	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	1.2e-14	38.6
WP_001831966.1\|1602618_1603827_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_002439046.1\|1604146_1605628_+	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	6.3e-49	34.5

DBSCAN-SWA_129

1615448 : 1616042

Aureococcus_anophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831922.1\|1615448_1616042_+	peptidylprolyl isomerase	A0A076FI46	Aureococcus_anophage	6.6e-26	41.3

DBSCAN-SWA_130

1619218 : 1624705

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832443.1\|1619218_1620397_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	2.3e-62	38.0
WP_002439062.1\|1620920_1622111_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	7.3e-32	29.4
WP_001831995.1\|1622219_1623464_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_002439066.1\|1623655_1624705_-	glycerophosphodiester phosphodiesterase	A0A173GBD0	Staphylococcus_phage	1.5e-36	39.6

DBSCAN-SWA_131

1634730 : 1638387

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469529.1\|1634730_1638387_+	helicase-exonuclease AddAB subunit AddA	S5M596	Bacillus_phage	6.8e-20	22.1

DBSCAN-SWA_132

1643474 : 1648116

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829283.1\|1643474_1645298_+	acetyltransferase	B5WZU0	Pseudomonas_phage	9.5e-31	30.7
WP_002467691.1\|1645506_1648116_+	ATP-dependent chaperone ClpB	A0A1C3S747	Escherichia_phage	2.0e-119	35.0

DBSCAN-SWA_133

1653662 : 1655673

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829326.1\|1653662_1654742_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-18	29.6
WP_001829319.1\|1654734_1655673_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.7e-21	31.9

DBSCAN-SWA_134

1659368 : 1664648

Streptococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832469.1\|1659368_1660547_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	9.7e-61	37.2
WP_001829308.1\|1660990_1661713_+	adaptor protein MecA	NA	NA	NA	NA
WP_001829282.1\|1661808_1662789_+	competence protein	NA	NA	NA	NA
WP_001829279.1\|1662839_1664648_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	3.7e-51	26.9

DBSCAN-SWA_135

1674583 : 1679160

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829295.1\|1674583_1674847_+	DUF4176 domain-containing protein	A0A1X9I6T6	Streptococcus_phage	1.5e-09	41.4
WP_107362610.1\|1674957_1675053_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_001829258.1\|1675119_1675323_-\|transposase	transposase	A0A0N7GFG6	Staphylococcus_phage	3.3e-09	80.0
WP_001829332.1\|1676901_1679160_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	6.3e-117	32.0

DBSCAN-SWA_136

1690119 : 1694765

Streptococcus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002446117.1\|1690119_1691682_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	1.7e-36	26.9
WP_002439148.1\|1691990_1692797_+	TerC family protein	S5MAL1	Bacillus_phage	3.9e-29	37.7
WP_001829335.1\|1693007_1694765_+\|protease	serine protease	W5SAB9	Pithovirus	4.6e-06	24.3

DBSCAN-SWA_137

1705045 : 1705261

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831694.1\|1705045_1705261_-	NINE protein	A0A060AN66	Enterococcus_phage	1.6e-06	40.4

DBSCAN-SWA_138

1715631 : 1719639

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831665.1\|1715631_1719639_-	bifunctional autolysin	A0A1J0MFI1	Staphylococcus_phage	2.6e-57	49.2

DBSCAN-SWA_139

1723438 : 1724641

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001833073.1\|1723438_1724641_+	serine hydrolase	G8IDB2	Mycobacterium_phage	8.2e-07	22.8

DBSCAN-SWA_140

1731113 : 1745745

Synechococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456618.1\|1731113_1731974_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.9e-37	39.2
WP_001831735.1\|1732178_1732661_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	43.3
WP_001831674.1\|1732647_1733775_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001831723.1\|1733775_1734480_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	1.6e-47	42.5
WP_001831728.1\|1734479_1734740_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001831727.1\|1734741_1735413_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_001831715.1\|1735405_1737595_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.7e-140	40.4
WP_001831721.1\|1737573_1739058_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-45	31.9
WP_001831685.1\|1739050_1740082_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.1e-64	43.4
WP_001831672.1\|1740081_1740648_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.0
WP_001831692.1\|1740664_1742143_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.9e-78	51.1
WP_001831701.1\|1742168_1743410_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_001831682.1\|1743542_1744349_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_001831678.1\|1744341_1745745_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-14	28.8

DBSCAN-SWA_141

1750927 : 1752100

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831690.1\|1750927_1752100_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	2.9e-73	41.5

DBSCAN-SWA_142

1761950 : 1762502

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831696.1\|1761950_1762502_-	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-15	44.8

DBSCAN-SWA_143

1767011 : 1770782

Erysipelothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831650.1\|1767011_1768418_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	3.8e-48	29.3
WP_001833064.1\|1768719_1768998_+	UPF0223 family protein	NA	NA	NA	NA
WP_002439334.1\|1769136_1769676_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002456615.1\|1769687_1770782_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.4e-37	43.0

DBSCAN-SWA_144

1779668 : 1785299

Streptococcus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831737.1\|1779668_1781516_+	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	3.4e-20	42.2
WP_104832469.1\|1781804_1782983_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	9.7e-61	37.2
WP_104832471.1\|1784120_1785299_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.7e-60	37.0

DBSCAN-SWA_145

1797359 : 1800253

Enterococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830132.1\|1797359_1798286_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	1.8e-09	42.2
WP_002439362.1\|1798506_1798758_+	DUF2129 domain-containing protein	NA	NA	NA	NA
WP_001830114.1\|1798767_1799157_-	hypothetical protein	NA	NA	NA	NA
WP_002469563.1\|1799223_1799766_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_001830072.1\|1799767_1800253_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.1e-26	41.5

DBSCAN-SWA_146

1807131 : 1808190

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830082.1\|1807131_1808190_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	3.6e-30	35.5

DBSCAN-SWA_147

1812693 : 1817334

Bodo_saltans_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830120.1\|1812693_1814403_+	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	4.0e-15	23.0
WP_001833037.1\|1814412_1816761_+	endonuclease MutS2	Q94M10	Lactobacillus_phage	1.4e-13	39.8
WP_001830148.1\|1817019_1817334_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	2.3e-25	47.6

DBSCAN-SWA_148

1823938 : 1824526

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830169.1\|1823938_1824526_+	XTP/dITP diphosphatase	A0A2H4UUV7	Bodo_saltans_virus	1.6e-08	26.9

DBSCAN-SWA_149

1846461 : 1849212

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469567.1\|1846461_1849212_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	2.7e-90	27.5

DBSCAN-SWA_150

1853797 : 1858408

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830174.1\|1853797_1855105_+	uracil permease	Q9KX94	Enterobacteria_phage	5.2e-55	34.9
WP_001830068.1\|1855130_1856012_+	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	2.3e-30	31.3
WP_001830129.1\|1856029_1857307_+	dihydroorotase	NA	NA	NA	NA
WP_001830071.1\|1857307_1858408_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.1e-64	36.0

DBSCAN-SWA_151

1862301 : 1862913

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830179.1\|1862301_1862913_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	6.8e-26	32.8

DBSCAN-SWA_152

1866118 : 1873049

Abalone_herpesvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830096.1\|1866118_1866742_+	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	4.2e-23	35.3
WP_002456586.1\|1866741_1866954_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_002469375.1\|1867495_1868695_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	2.1e-39	31.7
WP_002456584.1\|1868694_1871103_+	primosomal protein N'	NA	NA	NA	NA
WP_001830141.1\|1871210_1871414_-	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	1.2e-08	44.4
WP_002456583.1\|1871635_1872124_+	peptide deformylase	NA	NA	NA	NA
WP_002439455.1\|1872116_1873049_+\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	4.3e-11	30.3

DBSCAN-SWA_153

1876196 : 1878200

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456582.1\|1876196_1878200_+	Stk1 family PASTA domain-containing Ser/Thr kinase	M1PCM5	Moumouvirus	1.8e-22	35.7

DBSCAN-SWA_154

1888215 : 1890263

Trichoplusia_ni_ascovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830161.1\|1888215_1888950_+	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.2e-18	30.7
WP_001830184.1\|1889177_1889411_+	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_002456575.1\|1889525_1890263_+	ribonuclease III	G8DDA3	Micromonas_pusilla_virus	4.5e-24	31.8

DBSCAN-SWA_155

1906242 : 1907013

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829514.1\|1906242_1907013_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	3.3e-25	41.2

DBSCAN-SWA_156

1911077 : 1917612

Indivirus(33.33%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829508.1\|1911077_1913147_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.5e-104	39.3
WP_001832560.1\|1913171_1914479_+\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_002456225.1\|1914703_1915594_+	tyrosine recombinase XerC	A0A1B1IQT7	uncultured_Mediterranean_phage	4.2e-24	29.3
WP_001829498.1\|1915597_1916140_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_002469380.1\|1916208_1917612_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	1.8e-29	26.5

DBSCAN-SWA_157

1922240 : 1923011

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832561.1\|1922240_1923011_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	6.6e-26	43.0

DBSCAN-SWA_158

1927288 : 1938970

Streptococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456566.1\|1927288_1931599_+	PolC-type DNA polymerase III	A0A1X9I5C8	Streptococcus_phage	8.5e-22	40.1
WP_002439519.1\|1931777_1932245_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_002456565.1\|1932265_1933489_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_001829465.1\|1933506_1933791_+	YlxR family protein	NA	NA	NA	NA
WP_002439520.1\|1933790_1934108_+	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_002468903.1\|1934112_1936275_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	3.5e-24	25.3
WP_001829509.1\|1936577_1936928_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_002456563.1\|1937065_1937983_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_001832563.1\|1937998_1938970_+	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SJE1	Klosneuvirus	6.0e-08	32.1

DBSCAN-SWA_159

1943902 : 1949603

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002439534.1\|1943902_1946296_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	4.3e-84	48.7
WP_002439536.1\|1946298_1947012_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002439538.1\|1947042_1948314_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.4e-41	29.1
WP_001832569.1\|1948313_1949603_+	insulinase family protein	M1NN74	Moumouvirus	7.9e-16	24.2

DBSCAN-SWA_160

1954068 : 1955118

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002439552.1\|1954068_1955118_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	3.2e-124	68.8

DBSCAN-SWA_161

1961490 : 1962108

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832558.1\|1961490_1962108_+	poly-gamma-glutamate hydrolase family protein	A0A2H4J3M4	uncultured_Caudovirales_phage	1.9e-39	44.6

DBSCAN-SWA_162

1965424 : 1969998

Cafeteria_roenbergensis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832553.1\|1965424_1968046_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.8e-41	23.3
WP_002469374.1\|1968060_1969998_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	9.3e-61	30.4

DBSCAN-SWA_163

1977821 : 1978298

Fowlpox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456556.1\|1977821_1978298_-	glutathione peroxidase	Q70H87	Fowlpox_virus	1.1e-26	43.7

DBSCAN-SWA_164

1984061 : 1986253

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456552.1\|1984061_1984415_+	hypothetical protein	A0A1J0MF61	Staphylococcus_phage	2.2e-21	47.0
WP_002456551.1\|1984416_1984611_+	hypothetical protein	NA	NA	NA	NA
WP_002456548.1\|1985569_1986253_-	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	2.4e-11	50.0

DBSCAN-SWA_165

1989566 : 1993921

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456546.1\|1989566_1990442_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.7e-25	31.5
WP_002469377.1\|1990438_1991170_+	ABC transporter permease	NA	NA	NA	NA
WP_002456544.1\|1991169_1992264_+	sensor histidine kinase	NA	NA	NA	NA
WP_002439610.1\|1992260_1992863_+	response regulator transcription factor	NA	NA	NA	NA
WP_001829458.1\|1993031_1993220_-	membrane protein	NA	NA	NA	NA
WP_002468003.1\|1993384_1993921_+	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	2.8e-23	47.7

DBSCAN-SWA_166

2004869 : 2010200

Tupanvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831169.1\|2004869_2006384_+	catalase	A0A2K9L0T1	Tupanvirus	7.5e-90	42.8
WP_001831295.1\|2006473_2006623_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_001831302.1\|2006788_2007058_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_001832645.1\|2007211_2008189_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	5.2e-169	89.2
WP_002439636.1\|2008202_2009228_+	CAP domain-containing protein	U5Q0C0	Bacillus_phage	1.5e-17	35.9
WP_001831182.1\|2009579_2010200_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	7.7e-17	63.8

DBSCAN-SWA_167

2014434 : 2015559

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830960.1\|2014434_2015559_+	exonuclease SbcCD subunit D	Q4Z9B9	Staphylococcus_phage	1.0e-11	25.0

DBSCAN-SWA_168

2019271 : 2020912

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831122.1\|2019271_2020912_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.6e-21	25.2

DBSCAN-SWA_169

2026026 : 2030420

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456533.1\|2026026_2028021_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	5.9e-119	41.4
WP_002469383.1\|2028017_2030420_+	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.7e-104	33.8

DBSCAN-SWA_170

2039974 : 2041237

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831129.1\|2039974_2041237_+	Y-family DNA polymerase	O64031	Bacillus_phage	1.5e-96	45.0

DBSCAN-SWA_171

2044458 : 2046023

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831157.1\|2044458_2045025_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-23	34.7
WP_001830976.1\|2045027_2046023_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.7e-29	31.1

DBSCAN-SWA_172

2055033 : 2062515

Anomala_cuprea_entomopoxvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831327.1\|2055033_2055732_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.4e-14	29.4
WP_001831134.1\|2055734_2056511_-	ABC transporter ATP-binding protein	A0A2H4UUX5	Bodo_saltans_virus	4.0e-07	23.9
WP_001831062.1\|2056473_2057328_-	ABC transporter permease	NA	NA	NA	NA
WP_001831013.1\|2057317_2058319_-	ABC transporter permease	NA	NA	NA	NA
WP_001831305.1\|2058497_2058833_-	hypothetical protein	NA	NA	NA	NA
WP_001831236.1\|2059080_2060892_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	3.8e-149	46.1
WP_001830968.1\|2060985_2061633_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_001831097.1\|2061639_2062515_-	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	2.4e-16	30.1

DBSCAN-SWA_173

2067340 : 2068948

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830940.1\|2067340_2068948_+	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	9.5e-51	25.5

DBSCAN-SWA_174

2076557 : 2083855

Yellowstone_lake_phycodnavirus(25.0%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831198.1\|2076557_2077823_+	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	2.9e-10	23.7
WP_001831136.1\|2077954_2078704_-	ABC transporter permease	NA	NA	NA	NA
WP_002456525.1\|2078712_2079576_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	3.3e-26	36.7
WP_001830954.1\|2079562_2079973_-	hypothetical protein	NA	NA	NA	NA
WP_001831260.1\|2080918_2081119_-	cold shock protein CspA	Q9AZD3	Lactococcus_phage	2.5e-17	64.6
WP_002439708.1\|2081299_2081608_-	DUF1033 family protein	NA	NA	NA	NA
WP_001831190.1\|2081766_2082036_+	acylphosphatase	NA	NA	NA	NA
WP_002476740.1\|2082075_2082702_+\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	NA	NA	NA	NA
WP_001831251.1\|2082724_2083855_+	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	9.4e-29	25.8

DBSCAN-SWA_175

2087362 : 2088154

Halovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002469511.1\|2087362_2088154_-	MoxR family ATPase	R4TG24	Halovirus	3.1e-10	28.9

DBSCAN-SWA_176

2095766 : 2096426

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830971.1\|2095766_2096426_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.7e-35	34.0

DBSCAN-SWA_177

2103503 : 2117815

Staphylococcus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456515.1\|2103503_2104595_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.6e-20	32.6
WP_001831017.1\|2104945_2105560_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_001831309.1\|2105572_2106646_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_001831293.1\|2106663_2107167_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001831212.1\|2107502_2108978_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	2.4e-24	28.3
WP_001831241.1\|2109322_2109547_-	YozE family protein	NA	NA	NA	NA
WP_001831133.1\|2109546_2110047_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_002439748.1\|2110059_2110488_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_001831118.1\|2110484_2111009_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_001831247.1\|2111111_2111960_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	7.9e-65	99.2
WP_001830952.1\|2111969_2112455_-	trimethoprim-resistant dihydrofolate reductase DfrC	A0A0N9S8H6	Staphylococcus_phage	9.1e-90	98.1
WP_000282655.1\|2112496_2113453_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.1e-190	100.0
WP_001832777.1\|2113766_2114429_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.1e-29	37.4
WP_002457670.1\|2115184_2115622_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_001831110.1\|2115673_2115934_-	NifU N-terminal domain-containing protein	NA	NA	NA	NA
WP_001831026.1\|2115945_2116140_-	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_001831106.1\|2116390_2117095_+	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	8.4e-12	26.0
WP_001831152.1\|2117419_2117815_+	ribonuclease HI family protein	A0A076FI68	Aureococcus_anophage	7.3e-05	26.7

DBSCAN-SWA_178

2156427 : 2158308

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104832475.1\|2156427_2156994_-	DUF1273 domain-containing protein	U5J9F7	Bacillus_phage	1.2e-05	22.5
WP_001831244.1\|2157005_2157338_-	YppE family protein	NA	NA	NA	NA
WP_002476769.1\|2157681_2158308_+	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	5.0e-24	34.3

DBSCAN-SWA_179

2161711 : 2168797

Temperate_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831014.1\|2161711_2162398_-	DnaD domain-containing protein	Q938N2	Temperate_phage	1.5e-08	36.5
WP_002439780.1\|2162490_2163783_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	3.5e-56	30.3
WP_001831318.1\|2163903_2166612_-	3'-5' exoribonuclease	A0A1X9I5C8	Streptococcus_phage	1.1e-43	31.5
WP_001831050.1\|2166636_2167608_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_001831104.1\|2167594_2168797_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.1e-34	40.3

DBSCAN-SWA_180

2177668 : 2181257

Anguillid_herpesvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831235.1\|2177668_2178118_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.3e-29	42.8
WP_001831120.1\|2178257_2179217_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	4.0e-12	26.3
WP_001831089.1\|2179218_2179944_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_001831003.1\|2179936_2180515_-	hypothetical protein	NA	NA	NA	NA
WP_001043863.1\|2180984_2181257_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	4.2e-28	73.3

DBSCAN-SWA_181

2190198 : 2202717

Bacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831100.1\|2190198_2191578_-	ATP-dependent DNA helicase RecQ	M1PGQ0	Moumouvirus	1.3e-56	33.5
WP_001831191.1\|2191564_2192527_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001831262.1\|2192635_2192884_+	ferredoxin	A0A127AYY7	Bacillus_phage	6.8e-17	52.0
WP_001830988.1\|2193288_2193828_-	ECF transporter S component	NA	NA	NA	NA
WP_001831150.1\|2194419_2196186_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.2e-33	33.7
WP_001831066.1\|2196169_2196895_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.3e-47	42.2
WP_001830978.1\|2197028_2197766_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_001830975.1\|2197758_2198301_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.3e-09	32.5
WP_001831064.1\|2198293_2199025_-	segregation/condensation protein A	NA	NA	NA	NA
WP_001831156.1\|2199122_2199647_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_001831286.1\|2199699_2200587_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.3e-38	31.8
WP_001831103.1\|2200629_2201079_-	transcriptional repressor	NA	NA	NA	NA
WP_001831173.1\|2201183_2201726_-	NUDIX hydrolase	NA	NA	NA	NA
WP_104832476.1\|2201808_2202717_+	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	2.6e-05	33.9

DBSCAN-SWA_182

2206067 : 2207552

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831167.1\|2206067_2207552_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	6.9e-80	37.4

DBSCAN-SWA_183

2210721 : 2212128

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002440000.1\|2210721_2212128_-	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	2.2e-27	29.8

DBSCAN-SWA_184

2218662 : 2229289

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830939.1\|2218662_2220084_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.7e-40	27.2
WP_001830981.1\|2220343_2222020_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002456185.1\|2222035_2222488_-	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002456496.1\|2222802_2223684_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	1.5e-10	27.6
WP_001830935.1\|2223661_2223892_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_001831186.1\|2223884_2225222_-	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	6.0e-43	36.0
WP_001831090.1\|2225236_2225626_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_002456495.1\|2225701_2226064_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002440022.1\|2226075_2227434_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_001831211.1\|2227433_2227901_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_001831058.1\|2228158_2229289_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	8.2e-25	29.0

DBSCAN-SWA_185

2237288 : 2240136

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831087.1\|2237288_2238797_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	E3ST28	Prochlorococcus_phage	1.8e-80	41.8
WP_002456181.1\|2238789_2240136_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	5.3e-63	37.8

DBSCAN-SWA_186

2245668 : 2246292

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831016.1\|2245668_2246292_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	7.7e-33	39.3

DBSCAN-SWA_187

2252727 : 2266786

Bacillus_thuringiensis_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831217.1\|2252727_2253327_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-60	55.2
WP_001831164.1\|2253739_2254159_-	transcriptional repressor	NA	NA	NA	NA
WP_001831102.1\|2254161_2255010_-	metal ABC transporter permease	NA	NA	NA	NA
WP_001832763.1\|2255043_2255826_-	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.7e-22	29.8
WP_002456488.1\|2256043_2256934_-	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.3e-22	33.2
WP_001832762.1\|2256943_2258290_-	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	2.9e-53	33.7
WP_001831093.1\|2258324_2259425_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_001831175.1\|2259414_2260104_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_002440071.1\|2260258_2261365_-	RNA polymerase sigma factor RpoD	F4YCU2	Synechococcus_phage	1.1e-37	37.6
WP_001831005.1\|2261635_2263432_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.9e-53	35.8
WP_001831146.1\|2263605_2264424_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_010959185.1\|2264435_2265059_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002456487.1\|2265394_2266786_+\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	3.2e-47	29.0

DBSCAN-SWA_188

2269814 : 2270762

Erwinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831049.1\|2269814_2270762_-	PhoH family protein	W8D063	Erwinia_phage	8.9e-49	49.0

DBSCAN-SWA_189

2277655 : 2280751

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830934.1\|2277655_2278777_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.4e-29	27.2
WP_001831007.1\|2278921_2280751_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.6e-139	47.7

DBSCAN-SWA_190

2283787 : 2289973

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831284.1\|2283787_2285611_-	elongation factor 4	A0A1S5SF82	Streptococcus_phage	2.6e-20	23.5
WP_001831221.1\|2285903_2286155_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_001831125.1\|2286272_2287247_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_002470090.1\|2287291_2289508_-	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	9.1e-28	30.4
WP_001831274.1\|2289511_2289973_-	ComE operon protein 2	A7KUY9	Bacillus_phage	7.9e-35	57.1

DBSCAN-SWA_191

2302724 : 2339662

uncultured_Mediterranean_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832700.1\|2302724_2303207_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	6.4e-19	35.4
WP_001830881.1\|2303504_2303981_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_001830824.1\|2304011_2304635_-	uridine kinase	A0A1V0SAA3	Catovirus	8.2e-35	40.5
WP_001830748.1\|2304634_2305903_-	U32 family peptidase	Q6DW11	Phage_TP	5.2e-36	31.9
WP_002456168.1\|2305920_2306844_-	U32 family peptidase	NA	NA	NA	NA
WP_001830827.1\|2306846_2307482_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	7.4e-07	29.3
WP_001830855.1\|2307910_2308219_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_001830837.1\|2308233_2308662_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001830883.1\|2308663_2308924_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_001830814.1\|2308987_2311618_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.7e-62	34.2
WP_001830904.1\|2311946_2314379_-	ATP-dependent RecD-like DNA helicase	A0A1P8DII4	Virus_Rctr197k	1.1e-47	26.6
WP_001832695.1\|2314380_2315049_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_001830892.1\|2315211_2316330_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001830848.1\|2316329_2317472_-	cysteine desulfurase	A0A141ZJV0	Faustovirus	1.5e-26	28.0
WP_001830781.1\|2317714_2318710_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_001830746.1\|2318909_2319053_-	hypothetical protein	NA	NA	NA	NA
WP_001830806.1\|2319238_2319661_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_001830871.1\|2319746_2321018_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.8e-105	50.9
WP_001830777.1\|2321211_2321988_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_001830852.1\|2322543_2324310_-\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	3.4e-17	22.4
WP_001830876.1\|2324312_2325587_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_001830843.1\|2325958_2326834_-	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	6.2e-12	32.4
WP_001830766.1\|2326830_2327283_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_001832683.1\|2327296_2329486_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	4.1e-12	38.0
WP_001832698.1\|2330006_2330525_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.1e-28	46.5
WP_002456477.1\|2330543_2332817_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.3e-66	29.6
WP_001830033.1\|2333253_2333409_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	2.6e-14	77.6
WP_002456476.1\|2333564_2335856_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.0e-31	36.6
WP_001830800.1\|2336194_2336455_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-06	44.3
WP_001830840.1\|2336470_2337610_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.3e-83	44.4
WP_001830755.1\|2337630_2338656_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001830787.1\|2338657_2339662_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1

DBSCAN-SWA_192

2348977 : 2351608

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830862.1\|2348977_2351608_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	7.5e-154	40.9

DBSCAN-SWA_193

2361164 : 2372657

Bacillus_virus(20.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830765.1\|2361164_2362427_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.7e-141	61.7
WP_001830810.1\|2362713_2364015_-	trigger factor	NA	NA	NA	NA
WP_001830807.1\|2364175_2365099_-	hypothetical protein	NA	NA	NA	NA
WP_001830874.1\|2365115_2365727_-	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	8.1e-19	34.4
WP_001830839.1\|2366144_2366501_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_001830767.1\|2366552_2366753_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_001830789.1\|2366780_2367308_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.4e-11	33.8
WP_001830900.1\|2367515_2369018_-	amino acid permease	NA	NA	NA	NA
WP_001830850.1\|2369446_2371384_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	3.9e-115	36.7
WP_001830772.1\|2371736_2372657_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	3.4e-29	31.2

DBSCAN-SWA_194

2377513 : 2385318

Bacillus_virus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830823.1\|2377513_2378386_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	1.2e-44	39.3
WP_001830754.1\|2378401_2381032_-	DNA polymerase I	A8E2B3	Enterococcus_phage	1.0e-46	33.4
WP_001830867.1\|2381326_2383024_-	sensor histidine kinase	W8CYF6	Bacillus_phage	6.1e-32	36.7
WP_001830897.1\|2383023_2383734_-	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.4e-06	29.5
WP_001830826.1\|2384049_2385318_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	9.2e-09	55.6

DBSCAN-SWA_195

2388568 : 2390326

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830831.1\|2388568_2390326_-	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	2.7e-35	84.4

DBSCAN-SWA_196

2394928 : 2398126

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456463.1\|2394928_2398126_-	DNA polymerase III subunit alpha	A0A291AWR1	Streptomyces_phage	1.6e-129	31.1

DBSCAN-SWA_197

2405369 : 2405516

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830851.1\|2405369_2405516_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	7.3e-11	71.4

DBSCAN-SWA_198

2415753 : 2419893

Only_Syngen_Nebraska_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001832720.1\|2415753_2416500_-	glycerophosphoryl diester phosphodiesterase	A0A1J0F961	Only_Syngen_Nebraska_virus	2.6e-19	31.6
WP_001830816.1\|2416577_2417018_+	SACOL1771 family peroxiredoxin	NA	NA	NA	NA
WP_001830752.1\|2417144_2418308_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_001830903.1\|2418297_2419893_+	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	8.7e-73	63.6

DBSCAN-SWA_199

2423777 : 2426472

uncultured_Mediterranean_phage(50.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456457.1\|2423777_2425016_+\|protease	serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	2.4e-09	27.9
WP_001830858.1\|2425206_2426472_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	9.6e-83	41.9

DBSCAN-SWA_200

2435929 : 2440933

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456455.1\|2435929_2439439_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.0e-81	46.4
WP_001830779.1\|2439459_2440056_-	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_001832670.1\|2440078_2440933_-	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	2.8e-62	85.4

DBSCAN-SWA_201

2450510 : 2497451

Staphylococcus_phage(90.32%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830813.1\|2450510_2451773_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.8e-41	76.0
WP_002456451.1\|2452144_2463223_-	YSIRK signal domain/LPXTG anchor domain surface protein	A0A2H4PQU6	Staphylococcus_phage	2.7e-27	26.0
WP_001830891.1\|2463627_2463939_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.1e-35	71.8
WP_001830785.1\|2463964_2466382_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.4
WP_002456450.1\|2466670_2467885_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	3.0e-182	83.5
WP_002456449.1\|2467991_2468945_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	9.5e-67	84.0
WP_002456448.1\|2468941_2469505_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	6.2e-66	65.9
WP_001830809.1\|2469738_2470140_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001830886.1\|2470629_2471457_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_002456447.1\|2471700_2472702_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.5e-131	70.0
WP_002456446.1\|2472958_2473420_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-59	84.2
WP_002456445.1\|2473432_2474614_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.5e-178	76.1
WP_002467848.1\|2474626_2475259_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-87	77.6
WP_002469499.1\|2475265_2476309_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	8.9e-135	66.8
WP_002456442.1\|2476745_2478230_-	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
WP_001830727.1\|2478577_2479429_-	glucosaminidase domain-containing protein	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
WP_002456441.1\|2479806_2480022_-	hypothetical protein	NA	NA	NA	NA
WP_002456440.1\|2480229_2480709_+	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	3.5e-25	42.3
WP_001830734.1\|2480714_2481158_+	competence protein ComK	NA	NA	NA	NA
WP_002456439.1\|2481144_2481588_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	9.0e-20	42.2
WP_001830731.1\|2481727_2482441_-	transaldolase	M1PR54	Cyanophage	4.1e-22	37.4
WP_002446728.1\|2482717_2483026_+	hypothetical protein	NA	NA	NA	NA
WP_001830726.1\|2483062_2483428_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.1e-34	57.0
WP_001830729.1\|2483424_2483778_+	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	8.5e-05	32.5
WP_104832471.1\|2484297_2485476_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.7e-60	37.0
WP_002469577.1\|2485705_2485861_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	5.2e-15	79.6
WP_002456435.1\|2486145_2486982_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	6.1e-110	68.6
WP_002456434.1\|2487161_2488070_-	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.8e-102	80.6
WP_002469576.1\|2488172_2489372_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	9.2e-192	85.1
WP_002469572.1\|2489741_2491334_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.6e-268	83.6
WP_002456431.1\|2491564_2492350_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.0e-99	71.3
WP_002456430.1\|2492336_2492804_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	5.5e-44	57.4
WP_002457867.1\|2492874_2493123_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.5e-36	83.1
WP_001829851.1\|2493119_2494121_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	6.9e-92	50.2
WP_002456429.1\|2494110_2495535_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.6e-173	63.9
WP_002456427.1\|2496785_2497451_+	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	7.0e-08	41.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014119

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection