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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP026704 Providencia stuartii strain AR_0026 5 crisprs csa3,DEDDh,WYL,cas3,cas14j,DinG,cas1,cas3-cas2,cas5f,cas7f,cas6f 0 12 12 0

Results visualization

1. NZ_CP026704
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026704_1 283410-283558 Orphan I-F
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026704_2 3006937-3007040 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026704_3 3157730-3158135 Unclear I-F
6 spacers
cas1,cas3-cas2,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026704_4 3167974-3168542 Unclear I-F
9 spacers
cas6f,cas7f,cas5f,cas3-cas2,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP026704_5 3242121-3242688 Orphan I-F
9 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 MW145137 Providencia phage PSTNGR2lys, complete genome 36775-36806 0 1.0
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 MK448589 Streptococcus satellite phage Javan632, complete genome 6216-6247 5 0.844
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 HQ906666 Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB segment 2, partial genome 23266-23297 6 0.812
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 KX522565 Wolbachia phage WO, complete genome 28802-28833 6 0.812
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 HQ906662 Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1, complete sequence 53894-53925 6 0.812
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 MK672805 Vibrio phage Va_PF430-3_p42, complete genome 19868-19899 6 0.812
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 NC_008761 Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence 25159-25190 6 0.812
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 NC_008757 Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence 193871-193902 6 0.812
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 NC_008757 Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence 316066-316097 6 0.812
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 MN856005 Myoviridae sp. isolate 302, complete genome 3071-3102 6 0.812
NZ_CP026704_4 4.4|3168183|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168183-3168214 32 MN693436 Marine virus AFVG_25M57, complete genome 14332-14363 7 0.781
NZ_CP026704_4 4.4|3168183|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168183-3168214 32 MN693320 Marine virus AFVG_25M58, complete genome 14329-14360 7 0.781
NZ_CP026704_4 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168483-3168514 32 NZ_CP026273 Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence 139298-139329 7 0.781
NZ_CP026704_3 3.2|3157818|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157818-3157849 32 NC_015250 Acinetobacter phage 133, complete genome 120243-120274 8 0.75
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 NC_019739 Microcoleus sp. PCC 7113 plasmid pMIC7113.01, complete sequence 63427-63458 8 0.75
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 NZ_CP044357 Acinetobacter baumannii strain CAM180-1 plasmid pCAM180A, complete sequence 67184-67215 8 0.75
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 NZ_CP041149 Acinetobacter baumannii strain CUVET-MIC596 plasmid pCUVET596, complete sequence 60108-60139 8 0.75
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 NZ_CP040913 Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence 17491-17522 8 0.75
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 NZ_CP014652 Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence 6131-6162 8 0.75
NZ_CP026704_4 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168002-3168033 32 NZ_CP014654 Acinetobacter sp. DUT-2 plasmid unnamed3, complete sequence 7187-7218 8 0.75
NZ_CP026704_4 4.7|3168363|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168363-3168394 32 NZ_CP019037 Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence 245089-245120 8 0.75
NZ_CP026704_4 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168483-3168514 32 NC_019893 Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence 46472-46503 8 0.75
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MN693644 Marine virus AFVG_250M1161, complete genome 30248-30279 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 NZ_CP035561 Lactobacillus plantarum strain SRCM103297 plasmid unnamed5 23517-23548 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 JQ692107 Vibrio vulnificus phage SSP002, complete genome 46826-46857 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MN215888 Vibrio phage vB_VpaS_HCMJ, complete genome 46939-46970 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MF754116 Vibrio phage vB_VpaS_KF6, complete genome 45028-45059 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MF754115 Vibrio phage vB_VpaS_KF5, complete genome 46945-46976 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MN694432 Marine virus AFVG_250M20, complete genome 25511-25542 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MG602476 Vibrio phage VVP001, complete genome 28095-28126 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MN693757 Marine virus AFVG_250M21, complete genome 25568-25599 9 0.719
NZ_CP026704_3 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3157999-3158030 32 MH925090 UNVERIFIED: Vibrio phage ValLY_3, complete genome 24370-24401 9 0.719
NZ_CP026704_4 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168243-3168274 32 MT478991 Escherichia phage vB_EcoM_011D4, complete genome 14850-14881 9 0.719
NZ_CP026704_4 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168243-3168274 32 NC_041936 Escherichia phage ECD7, complete genome 64025-64056 9 0.719
NZ_CP026704_5 5.1|3242149|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242149-3242180 32 NZ_CP045351 Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence 1154525-1154556 9 0.719
NZ_CP026704_5 5.4|3242329|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242329-3242360 32 NZ_CP015595 Acinetobacter sp. NCu2D-2 plasmid unnamed, complete sequence 73645-73676 9 0.719
NZ_CP026704_5 5.5|3242389|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242389-3242420 32 NZ_CP015595 Acinetobacter sp. NCu2D-2 plasmid unnamed, complete sequence 73645-73676 9 0.719
NZ_CP026704_5 5.7|3242509|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242509-3242540 32 MT670420 Pseudomonas phage phiPsa347, complete genome 74089-74120 9 0.719
NZ_CP026704_5 5.7|3242509|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242509-3242540 32 MT670417 Pseudomonas phage phiPsa267, complete genome 74104-74135 9 0.719
NZ_CP026704_4 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168243-3168274 32 AP014012 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C102A-MedDCM-OCT-S39-C98, *** SEQUENCING IN PROGRESS *** 23905-23936 10 0.688
NZ_CP026704_4 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168483-3168514 32 NZ_CP020331 Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence 345137-345168 10 0.688
NZ_CP026704_4 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168483-3168514 32 NC_023600 Mycobacterium phage Jolie1, complete genome 56807-56838 10 0.688
NZ_CP026704_4 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3168483-3168514 32 NC_024145 Mycobacterium phage Hosp, complete genome 54889-54920 10 0.688
NZ_CP026704_5 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT 3242629-3242660 32 NZ_CP012104 Bacillus thuringiensis strain HS18-1 plasmid pHS18-5, complete sequence 33195-33226 10 0.688

1. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MW145137 (Providencia phage PSTNGR2lys, complete genome) position: , mismatch: 0, identity: 1.0

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgacaaagattattttttcaagccttcatttg	Protospacer
********************************

2. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MK448589 (Streptococcus satellite phage Javan632, complete genome) position: , mismatch: 5, identity: 0.844

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
tgaaagaggttgattacctggtgcttgatgac	Protospacer
** . **********  ***************

3. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to HQ906666 (Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB segment 2, partial genome) position: , mismatch: 6, identity: 0.812

-cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
gcagaa-aagcaaaagctaaagaactttatctc	Protospacer
 ****. ****.************ *****  *

4. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to KX522565 (Wolbachia phage WO, complete genome) position: , mismatch: 6, identity: 0.812

-cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
gcagaa-aagcaaaagctaaagaactttatctc	Protospacer
 ****. ****.************ *****  *

5. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to HQ906662 (Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1, complete sequence) position: , mismatch: 6, identity: 0.812

-cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
gcagaa-aagcaaaagctaaagaactttatctc	Protospacer
 ****. ****.************ *****  *

6. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MK672805 (Vibrio phage Va_PF430-3_p42, complete genome) position: , mismatch: 6, identity: 0.812

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
ttagccaggttgatctactggtgcttgatgaa	Protospacer
*  *. ********.**************** 

7. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_008761 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence) position: , mismatch: 6, identity: 0.812

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
tggccaagcttgatttactggtgattgatgac	Protospacer
**  ..** ************** ********

8. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 6, identity: 0.812

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
tggccaagcttgatttactggtgattgatgac	Protospacer
**  ..** ************** ********

9. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 6, identity: 0.812

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
tggccaagcttgatttactggtgattgatgac	Protospacer
**  ..** ************** ********

10. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN856005 (Myoviridae sp. isolate 302, complete genome) position: , mismatch: 6, identity: 0.812

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
tgaaagaggttgatgtcctggtgcttgatgat	Protospacer
** . ********* * **************.

11. spacer 4.4|3168183|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 7, identity: 0.781

gtccgcatttgctattggagtgtcatcaagaa	CRISPR spacer
tgttgaatttagtattggagtgtcatcaagaa	Protospacer
  ..* ****. ********************

12. spacer 4.4|3168183|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 7, identity: 0.781

gtccgcatttgctattggagtgtcatcaagaa	CRISPR spacer
tgttgaatttagtattggagtgtcatcaagaa	Protospacer
  ..* ****. ********************

13. spacer 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026273 (Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence) position: , mismatch: 7, identity: 0.781

gttgttgttcgtgttgaacaaggcgaaaccga	CRISPR spacer
gttgttgttgatgttgaacaaggcactcctga	Protospacer
********* .*************.   *.**

14. spacer 3.2|3157818|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_015250 (Acinetobacter phage 133, complete genome) position: , mismatch: 8, identity: 0.75

tgcaaaca---tggcatttatcattgtcatctttt	CRISPR spacer
---gaataggttgccattcatcattgtcatctttg	Protospacer
   .**.*   ** ****.*************** 

15. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_019739 (Microcoleus sp. PCC 7113 plasmid pMIC7113.01, complete sequence) position: , mismatch: 8, identity: 0.75

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
caccccaagcgaaagctaaaacagtttaagtt	Protospacer
**   ***************. ****** * .

16. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044357 (Acinetobacter baumannii strain CAM180-1 plasmid pCAM180A, complete sequence) position: , mismatch: 8, identity: 0.75

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgaaaaagattatttttttaagcttagttctt	Protospacer
*** **************.****.*   *.* 

17. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041149 (Acinetobacter baumannii strain CUVET-MIC596 plasmid pCUVET596, complete sequence) position: , mismatch: 8, identity: 0.75

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgaaaaagattatttttttaagcttagttctt	Protospacer
*** **************.****.*   *.* 

18. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040913 (Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence) position: , mismatch: 8, identity: 0.75

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgaaaaagattatttttttaagcttagttctt	Protospacer
*** **************.****.*   *.* 

19. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgaaaaagattatttttttaagcttagttctt	Protospacer
*** **************.****.*   *.* 

20. spacer 4.1|3168002|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014654 (Acinetobacter sp. DUT-2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tgacaaagattattttttcaagccttcatttg	CRISPR spacer
tgaaaaagattatttttttaagcttagttctt	Protospacer
*** **************.****.*   *.* 

21. spacer 4.7|3168363|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

-cagagatatacctgttccgctcccgtaaatgc	CRISPR spacer
tcaaccacg-acctgttccgctccgggaaatgc	Protospacer
 **.  *.. ************** * ******

22. spacer 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_019893 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete sequence) position: , mismatch: 8, identity: 0.75

gttgttgttcgtgttgaacaaggcga-aaccga	CRISPR spacer
aaggttgttcgcgttgaacaagacgacgatcg-	Protospacer
.  ********.**********.*** .*.** 

23. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN693644 (Marine virus AFVG_250M1161, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
cgttagcagctaaagctaaagaattttatgat	Protospacer
*.  .  *** ************ *******.

24. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035561 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed5) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
acaaacaggcgaaagcttaagaagtttaatcc	Protospacer
  .*.**.********* **********   *

25. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to JQ692107 (Vibrio vulnificus phage SSP002, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

26. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN215888 (Vibrio phage vB_VpaS_HCMJ, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

27. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MF754116 (Vibrio phage vB_VpaS_KF6, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

28. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MF754115 (Vibrio phage vB_VpaS_KF5, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

29. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN694432 (Marine virus AFVG_250M20, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aaagacttgctaaagctaaaaaagtttatgaa	Protospacer
 *...*  ** *********.********** 

30. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MG602476 (Vibrio phage VVP001, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

31. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MN693757 (Marine virus AFVG_250M21, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aaagacttgctaaagctaaaaaagtttatgaa	Protospacer
 *...*  ** *********.********** 

32. spacer 3.5|3157999|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MH925090 (UNVERIFIED: Vibrio phage ValLY_3, complete genome) position: , mismatch: 9, identity: 0.719

cagagcaagcgaaagctaaagaagtttatgac	CRISPR spacer
aagagcaagcgccagctaaagaagaaaaagca	Protospacer
 **********  ***********   * *  

33. spacer 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MT478991 (Escherichia phage vB_EcoM_011D4, complete genome) position: , mismatch: 9, identity: 0.719

tttagttgaccatttcgaatattg------cataaagt	CRISPR spacer
gttagttgaccatctggaatattgatctgcca------	Protospacer
 ************.* ********      **      

34. spacer 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_041936 (Escherichia phage ECD7, complete genome) position: , mismatch: 9, identity: 0.719

tttagttgaccatttcgaatattg------cataaagt	CRISPR spacer
gttagttgaccatctggaatattgatctgcca------	Protospacer
 ************.* ********      **      

35. spacer 5.1|3242149|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 9, identity: 0.719

attaaacaaggcatcaatagccatttgctcat	CRISPR spacer
atcaaacaaggcataaatagccaccaatgcaa	Protospacer
**.*********** ********.. .. ** 

36. spacer 5.4|3242329|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015595 (Acinetobacter sp. NCu2D-2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acttagctcaggaattagtagtatttatgtca	CRISPR spacer
ctgtagctcaggaattagcaggatttcctgca	Protospacer
 . ***************.** **** .  **

37. spacer 5.5|3242389|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015595 (Acinetobacter sp. NCu2D-2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

acttagctcaggaattagtagtatttatgtca	CRISPR spacer
ctgtagctcaggaattagcaggatttcctgca	Protospacer
 . ***************.** **** .  **

38. spacer 5.7|3242509|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MT670420 (Pseudomonas phage phiPsa347, complete genome) position: , mismatch: 9, identity: 0.719

atacaaacaaggctcacaacctgcctcaactg	CRISPR spacer
atacagacaaggctcacaacctgttcaggcgt	Protospacer
*****.*****************... ..*  

39. spacer 5.7|3242509|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to MT670417 (Pseudomonas phage phiPsa267, complete genome) position: , mismatch: 9, identity: 0.719

atacaaacaaggctcacaacctgcctcaactg	CRISPR spacer
atacagacaaggctcacaacctgttcaggcgt	Protospacer
*****.*****************... ..*  

40. spacer 4.5|3168243|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to AP014012 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C102A-MedDCM-OCT-S39-C98, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

tttagttgaccatttcgaatattgcataaagt	CRISPR spacer
gatgtttgaccatttcaaatactgcatatgcc	Protospacer
  *. ***********.****.****** . .

41. spacer 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 10, identity: 0.688

gttgttgttcgtgttgaacaaggcgaaaccga	CRISPR spacer
catcatggtcgtgatgaacaaggcgaaatacg	Protospacer
  *  ** ***** **************.  .

42. spacer 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_023600 (Mycobacterium phage Jolie1, complete genome) position: , mismatch: 10, identity: 0.688

gttgttgttcgtgttgaacaaggcgaaaccga	CRISPR spacer
gagccccgtcgtgctgaacaaggcgaacccgg	Protospacer
*   ..  *****.************* ***.

43. spacer 4.9|3168483|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NC_024145 (Mycobacterium phage Hosp, complete genome) position: , mismatch: 10, identity: 0.688

gttgttgttcgtgttgaacaaggcgaaaccga	CRISPR spacer
gagccccgtcgtgctgaacaaggcgaacccgg	Protospacer
*   ..  *****.************* ***.

44. spacer 5.9|3242629|32|NZ_CP026704|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012104 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-5, complete sequence) position: , mismatch: 10, identity: 0.688

tgtgtgaggttgatttactggtgcttgatgac	CRISPR spacer
taacaagcgttgatttcctggtacttgatgat	Protospacer
*.   .. ******** *****.********.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 598859 : 641039 31 Escherichia_phage(30.77%) transposase,integrase,tRNA attL 629439:629498|attR 639376:640162
DBSCAN-SWA_2 672216 : 714357 39 Enterobacteria_phage(10.0%) transposase,integrase,holin attL 667128:667143|attR 687354:687369
DBSCAN-SWA_3 1414513 : 1451757 28 Synechococcus_phage(40.0%) transposase,plate NA
DBSCAN-SWA_4 1719411 : 1793175 59 Escherichia_phage(15.38%) transposase,protease,tRNA NA
DBSCAN-SWA_5 2324959 : 2371196 42 Enterobacteria_phage(16.67%) holin,integrase,transposase attL 2333987:2334025|attR 2372565:2372603
DBSCAN-SWA_6 2515912 : 2556791 67 Acinetobacter_phage(15.79%) transposase,lysis,holin,coat,capsid,terminase,integrase attL 2512650:2512664|attR 2559204:2559218
DBSCAN-SWA_7 2566818 : 2575983 6 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_8 2644917 : 2655509 11 Mycobacterium_phage(25.0%) NA NA
DBSCAN-SWA_9 2831951 : 2839959 8 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_10 2885495 : 2896191 10 Paramecium_bursaria_Chlorella_virus(16.67%) protease,tRNA NA
DBSCAN-SWA_11 2991366 : 3006546 20 Morganella_phage(40.0%) integrase attL 2994156:2994169|attR 2998917:2998930
DBSCAN-SWA_12 4106647 : 4164728 52 Haemophilus_phage(19.05%) transposase,plate,tail,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage