CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	0 crisprs	cas14j,Cas14u_CAS-V,cas14k,cas8b1,DinG	0	0	2	0
NZ_CP019655	Paenibacillus larvae subsp. larvae strain Eric_III chromosome, complete genome	10 crisprs	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,RT,c2c10_CAS-V-U3,WYL,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,cas14j,c2c9_V-U4	11	37	23	2
NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	0 crisprs	cas14j	0	0	0	0
NZ_CP019657	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed2, complete sequence	0 crisprs	c2c10_CAS-V-U3,DinG	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5150 : 13031

Paenibacillus_phage(60.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932825.1\|5150_5522_-	helix-turn-helix transcriptional regulator	A0A0F6WBJ9	Vibrio_phage	5.6e-07	37.3
WP_104932826.1\|5628_5853_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104932827.1\|5889_6294_+	ArpU family transcriptional regulator	NA	NA	NA	NA
WP_104932828.1\|6311_7178_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_104932829.1\|7443_8286_+	hypothetical protein	NA	NA	NA	NA
WP_158672839.1\|8362_8533_+	hypothetical protein	R9W0Q6	Paenibacillus_phage	4.6e-17	81.6
WP_104932830.1\|8586_8901_+	hypothetical protein	A0A0N9SGJ1	Paenibacillus_phage	5.1e-17	45.1
WP_104932831.1\|8893_9109_+	hypothetical protein	A0A0K2CY28	Paenibacillus_phage	7.9e-38	97.2
WP_104932832.1\|9113_9434_+	hypothetical protein	A0A2I7SCA0	Paenibacillus_phage	2.1e-47	88.2
WP_158672840.1\|9430_9589_+	hypothetical protein	A0A0K2CXM5	Paenibacillus_phage	1.2e-06	58.5
WP_104932833.1\|10068_10314_+	hypothetical protein	NA	NA	NA	NA
WP_104932834.1\|10303_10573_+	hypothetical protein	NA	NA	NA	NA
WP_104932835.1\|10766_11069_+\|transposase	transposase	A0A191SB13	Nostoc_phage	1.7e-22	54.2
WP_104932836.1\|11190_11490_+	hypothetical protein	R9W0Q8	Paenibacillus_phage	5.7e-10	70.7
WP_104932837.1\|11623_12679_+	N-acetyltransferase	Q6SE88	Lactobacillus_prophage	6.2e-59	38.2
WP_104932838.1\|12656_13031_+	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.2e-25	46.0

DBSCAN-SWA_2

41447 : 97457

Paenibacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932862.1\|41447_42698_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	1.7e-63	40.4
WP_104932863.1\|43828_44347_+	hypothetical protein	NA	NA	NA	NA
WP_104932919.1\|44399_46550_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	9.9e-88	40.6
WP_104932864.1\|46563_46758_+	hypothetical protein	NA	NA	NA	NA
WP_104932865.1\|46760_47804_+	hypothetical protein	NA	NA	NA	NA
WP_104932866.1\|48039_49098_+	hypothetical protein	NA	NA	NA	NA
WP_104932867.1\|49272_49623_+	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	4.6e-35	62.6
WP_104932868.1\|49878_50244_+	hypothetical protein	A0A0K2CZ58	Paenibacillus_phage	6.4e-64	95.0
WP_104932869.1\|50256_51393_+	site-specific DNA-methyltransferase	A0A1B0VM49	Pseudomonas_phage	4.9e-78	45.1
WP_104932870.1\|51542_52226_+	DsbA family protein	NA	NA	NA	NA
WP_104932871.1\|52428_52716_+	hypothetical protein	NA	NA	NA	NA
WP_104932872.1\|52712_52904_+	hypothetical protein	NA	NA	NA	NA
WP_104932873.1\|52887_54005_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	9.2e-154	99.6
WP_104932874.1\|55380_56732_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.3e-95	62.3
WP_104932920.1\|57013_57841_-	DNA ligase	O64130	Bacillus_phage	1.4e-50	44.3
WP_158672842.1\|57956_59141_+	hypothetical protein	NA	NA	NA	NA
WP_104932876.1\|59115_60528_+	DEAD/DEAH box helicase	I3VYY6	Thermoanaerobacterium_phage	2.3e-37	25.9
WP_104932877.1\|60511_61819_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	8.8e-63	32.6
WP_104932878.1\|61805_62222_+	hypothetical protein	NA	NA	NA	NA
WP_104932879.1\|62222_62870_+	ParB-like nuclease domain-containing protein	A0A0F7L444	uncultured_marine_virus	2.5e-50	52.0
WP_104932880.1\|62874_63126_+	hypothetical protein	NA	NA	NA	NA
WP_104932881.1\|63122_63425_+	hypothetical protein	NA	NA	NA	NA
WP_104932882.1\|63467_63833_-	hypothetical protein	NA	NA	NA	NA
WP_104932883.1\|63850_64480_-	hypothetical protein	NA	NA	NA	NA
WP_104932884.1\|64651_65482_+	hypothetical protein	NA	NA	NA	NA
WP_104932885.1\|65507_65762_+	hypothetical protein	NA	NA	NA	NA
WP_158672843.1\|65806_65983_+	hypothetical protein	NA	NA	NA	NA
WP_104932888.1\|66362_67046_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.6e-119	97.4
WP_104932890.1\|68019_69399_-	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_158672844.1\|69410_69629_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104932892.1\|69774_70620_+	hypothetical protein	NA	NA	NA	NA
WP_104932893.1\|70658_70988_+	hypothetical protein	NA	NA	NA	NA
WP_104932894.1\|71052_71694_+	hypothetical protein	NA	NA	NA	NA
WP_104932895.1\|71720_72323_+	hypothetical protein	NA	NA	NA	NA
WP_104932896.1\|73688_73928_+	hypothetical protein	NA	NA	NA	NA
WP_104932897.1\|74062_74497_+	DUF5348 domain-containing protein	NA	NA	NA	NA
WP_104932898.1\|74812_75211_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	1.5e-50	70.5
WP_104932899.1\|76442_76985_-	hypothetical protein	NA	NA	NA	NA
WP_104932900.1\|77078_77258_+	hypothetical protein	NA	NA	NA	NA
WP_104932901.1\|77845_79453_-	hypothetical protein	NA	NA	NA	NA
WP_104932902.1\|79449_80481_-	hypothetical protein	NA	NA	NA	NA
WP_104932921.1\|80703_81972_+	DNA polymerase IV	O64031	Bacillus_phage	8.0e-61	36.7
WP_104932903.1\|82083_83214_+	Fic family protein	D7RWK9	Brochothrix_phage	4.5e-07	22.5
WP_104932922.1\|83447_83702_+	hypothetical protein	NA	NA	NA	NA
WP_158672845.1\|85185_85491_-	hypothetical protein	NA	NA	NA	NA
WP_104932923.1\|87163_87403_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0N9S804	Paenibacillus_phage	1.2e-07	48.4
WP_104932905.1\|87399_87729_+	mRNA-degrading endonuclease	NA	NA	NA	NA
WP_104932906.1\|87754_88045_+	hypothetical protein	NA	NA	NA	NA
WP_104932907.1\|88287_88524_-	hypothetical protein	NA	NA	NA	NA
WP_104932908.1\|88507_89281_-	ParA family protein	A0A0K2FLP4	Brevibacillus_phage	5.0e-50	39.5
WP_104932909.1\|89685_90990_+	competence protein CoiA	NA	NA	NA	NA
WP_104932874.1\|91194_92546_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.3e-95	62.3
WP_104932910.1\|92957_95111_+	AAA family ATPase	NA	NA	NA	NA
WP_104932911.1\|95089_96826_+	ATP-dependent helicase	A7KV33	Bacillus_phage	3.1e-15	29.0
WP_104932912.1\|97127_97457_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	1.1e-33	55.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019655

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019655_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_1

181366-181501

Orphan

Consensus_repeat	Method
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019655_1

>merge|NZ_CP019655|1|181366-181501|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAACGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTCTAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

>NZ_CP019655|1|1|181366-181501|CRISPRCasFinder
TAAGGCAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA	CGCTTCGAAAAATCCGATCTGAATGGGCCATATTTTGCTTTGCAAAAATGGTAGTC
TAAGGTAGGATATTTTCTCGCAGCCTGATCGAAGCAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_036655561.1\|185142_185472_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283747
NZ_CP019655.1\|WP_077996482.1\|165813_166863_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377935
NZ_CP019655.1\|WP_036655555.1\|188250_189006_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP019655.1\|WP_023482256.1\|187824_188160_+\|DNA-replication-initiation-control-protein-YabA	unknown	unknown	gnl\|CDD\|377617
NZ_CP019655.1\|WP_077996487.1\|174008_176030_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP019655.1\|WP_158672704.1\|164296_165298_+\|DUF4340-domain-containing-protein	unknown	unknown	gnl\|CDD\|379518
NZ_CP019655.1\|WP_036657332.1\|162917_164300_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|378253
NZ_CP019655.1\|WP_024095462.1\|184444_185110_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP019655.1\|WP_077996484.1\|167733_169488_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366444
NZ_CP019655.1\|WP_024095464.1\|181842_182358_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996483.1\|167031_167481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996485.1\|170742_171441_+\|heptaprenylglyceryl-phosphate-synthase	unknown	unknown	gnl\|CDD\|235237
NZ_CP019655.1\|WP_042119882.1\|165550_165781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996488.1\|185518_185965_+\|YaaR-family-protein	unknown	unknown	gnl\|CDD\|377152
NZ_CP019655.1\|WP_077996486.1\|171589_173920_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP019655.1\|WP_023482262.1\|182940_184374_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224893
NZ_CP019655.1\|WP_042119381.1\|186016_186994_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|181214
NZ_CP019655.1\|WP_023483112.1\|169548_170385_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP019655.1\|WP_024095463.1\|182524_182710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378490
NZ_CP019655.1\|WP_023482257.1\|186996_187806_+\|stage-0-sporulation-family-protein	unknown	unknown	gnl\|CDD\|224688

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_036655561.1\|185142_185472_+\|hypothetical-protein	gnl\|CDD\|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	2.47675e-65
NZ_CP019655.1\|WP_077996482.1\|165813_166863_+\|hypothetical-protein	gnl\|CDD\|377935	pfam07875, Coat_F, Coat F domain. The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.	3.27042e-12
NZ_CP019655.1\|WP_023482256.1\|187824_188160_+\|DNA-replication-initiation-control-protein-YabA	gnl\|CDD\|377617	pfam06156, YabB, Initiation control protein YabA. YabA is involved in initiation control of chromosome replication. It interacts with both DnaA and DnaN, acting as a bridge between these two proteins.	4.54817e-41
NZ_CP019655.1\|WP_077996487.1\|174008_176030_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP019655.1\|WP_158672704.1\|164296_165298_+\|DUF4340-domain-containing-protein	gnl\|CDD\|379518	pfam14238, DUF4340, Domain of unknown function (DUF4340). This domain is found in bacteria, and is typically between 183 and 196 amino acids in length.	6.26138e-23
NZ_CP019655.1\|WP_036657332.1\|162917_164300_+\|ABC-transporter	gnl\|CDD\|378253	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system. This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins.	5.96674e-29
NZ_CP019655.1\|WP_042119381.1\|186016_186994_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|181214	PRK08058, PRK08058, DNA polymerase III subunit delta'; Validated.	1.43963e-120
NZ_CP019655.1\|WP_077996484.1\|167733_169488_+\|hypothetical-protein	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	0.0017459
NZ_CP019655.1\|WP_024095463.1\|182524_182710_+\|hypothetical-protein	gnl\|CDD\|378490	pfam10764, Gin, Inhibitor of sigma-G Gin. Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB.	1.01342e-13
NZ_CP019655.1\|WP_077996485.1\|170742_171441_+\|heptaprenylglyceryl-phosphate-synthase	gnl\|CDD\|235237	PRK04169, PRK04169, heptaprenylglyceryl phosphate synthase.	2.98734e-93
NZ_CP019655.1\|WP_036655555.1\|188250_189006_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.57642e-92
NZ_CP019655.1\|WP_077996488.1\|185518_185965_+\|YaaR-family-protein	gnl\|CDD\|377152	pfam03885, DUF327, Protein of unknown function (DUF327). The proteins in this family are around 140-170 residues in length. The proteins contain many conserved residues. with the most conserved motifs found in the central and C-terminal region. The function of these proteins is unknown.	1.43719e-39
NZ_CP019655.1\|WP_077996486.1\|171589_173920_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019655.1\|WP_023482262.1\|182940_184374_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	1.95758e-129
NZ_CP019655.1\|WP_023483112.1\|169548_170385_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.60875e-100
NZ_CP019655.1\|WP_024095462.1\|184444_185110_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	3.9371e-89
NZ_CP019655.1\|WP_023482257.1\|186996_187806_+\|stage-0-sporulation-family-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	1.87233e-104

>NZ_CP019655.1|WP_077996487.1|174008_176030_+|NAD-dependent-DNA-ligase-LigA
MTDVISAMKILIEEINKHNYHYYTLDEPTITDQEYDALYDRLLKLEKESGTVLPNSPTLRVGGDILKGFEPHRHRSRLWSLDKAQSIEVLKNWHNRVQKLVNDYNSKNPSTPLPEPSFAVELKFDGLTINLTYDQGNLVQASTRGNGVVGEGILAQVKTIKSVPLEIPYKEGLIEVQGEGMMLLSVLDQYNQTAAEPLKNARNAAAGALRNLNPKVTAERRLTAFFYNVGFSDRKQFMNHQEMIAFLKENHFKVNPYVKYFNTIDEVFEEMKKLEQERHDFDFLIDGAVIKVTDIRTREVLGYTEKFPRWAIAYKFEAEEVTTVLEGVSWEVGRTGKITPVAKVEPVELAGVTVQNCTLNNIGDIERKNLKHALGSLVYIRRSNDVIPEILGKVTEEIDGEEIKYPEHCPACGTELEQRGAHLFCPNRLGCKPQLIGRITHFASRDAMDIETFSVMTAEQLYQQLDVRDPADLYDLTYDDIIQLPRFGEKKANNLLDAIEKSKERDLSSFLFALGIPNTGKTTTKVLAEHFRSLDKVMDAAVEELIALPDVGGIVADSIYTFFRDPIMIESIRRMKKAGVQAQMEAEEGKAEIDPGHPFYGKTIVLTGTLSSMSRDEAAKKLESLGAKVTGSVSKKTDIVIAGENAGSKLAKAEQLGIRVIDNEDELLHLLDT
>NZ_CP019655.1|WP_077996486.1|171589_173920_+|DNA-helicase-PcrA
MNETKNILDAIQRLNPQQCKAVETTQGPLLIMAGAGSGKTRVLTHRIAYLIASRKAAPWSILAITFTNKAAREMQDRVGKLVGPAAEDIWVSTFHSMCVRILRKDISRLGFTSNFSILDSSDQLSVIKTCMKELNIDTKKFEPKAIQAAIGTAKNELITPARYDERIGDYFEGIVSKVYALYQKKLKQNNSLDFDDLIMTTIELFKEVPEVLDFYQNKFQYIHVDEYQDTNRAQYMLCQMIADKHKNICVVGDSDQSIYRWRGADITNILNFEEDYPDAVTIMLEQNYRSTSNILNAANQVISNNSGRKPKNLWTDKGEGSKIKLYNADSEHEEGYFIAGEINKNISNGKQYSDHAILYRTNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLISNPDDDLSLRRIVNVPKRGIGDTTMDKVADAAAKRGMSLYALLSEVDSLEISTRAKNALRDFYDMISNLNRMVEYVSVTDLTEKMLEMTEYRIELQRENTLESKARLENIDEFISVTMDFEKRNDNKSLVSFLTDLALIADIDTMDKEDAPQDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFTDDEELEEERRLAYVGITRAEQELFLTCARMRTLFGRTTANAPSRFLQELPEEVTERISSGERFGRSAGTGWGRPAAGGQGFGARDASFGSSSSVSSGWGQSSLKGRNGAPSSGPGKAAVRIKQPLGTNNPGDFNMGDKVSHGKWGTGVIVAVKGKGDDTELQIAFSAPVGVKRLLAKFAPIKKEN
>NZ_CP019655.1|WP_077996485.1|170742_171441_+|heptaprenylglyceryl-phosphate-synthase
MIVDITHWKHAFKLDPDKTISDEALEQICLSGTDVILVGGSSGVTFENTVELLSRIRMYEVPCVLEVSHLEAIVPGFDLYLIPSVLNAGDPEWILGQHHKAVKEYGAVMDWKEVLVEGYVILNGESTAAKVSEADTDLTIRDVVAYARMAEHMFNLPILYLEYSGTFGDMKLVSTAKSVLSRTRVFYGGGIDGPDKASIAASAADTVVVGNLIYTDLHKALATVTSVASIDS
>NZ_CP019655.1|WP_023483112.1|169548_170385_+|ABC-transporter-ATP-binding-protein
MLILKQVTKKYGKKLALHPVNVQLDKGVIGLLGPNGAGKTTLLRILATYHSATTGTISLNQVAWAADIEKIRTMIGYLPQHIGIFPNLTVHEYLEYMGTLRNMDNQTLKQKIPSILEDVRLQDQARKKVKQLSGGMKQRLGIGQAILHEPELLLVDEPTAGLDPEERIRFRHLIKRLSTNRIVILSTHITEDVAVTCDQVLLMNKGKLEKYESVQQVTDNALHKVWLVEANFSEYERLRNNQDMFITNVTEHKGRYQLMGTFTGGSGQSSLYYAVVHT
>NZ_CP019655.1|WP_077996484.1|167733_169488_+|hypothetical-protein
MLRLMKFQALEFMRKPVWFVLFLGAIGVAVFLPSENLTDLYIIPSLIYMIMMMTLLFFLFGAEEARAEQMNNQIEFYRTTPKLISLLVSKFLYWLILATVVYFILYLTVVGYIQFTHHNVTIKLIGESFTYTVFCWLLPFYFSLLLGYLFYSIYPSLFSYLGIIVLWFLTTPYNSMLRFIPSWIGGWLINGDTNIQLTATNIYPLEKMLPNTGVYIQRLFMCLLLLSLFGLIKAYQKVQLKRVCGGLVIAACTLPIFSPYVPYITDPERTGLQDSVFTLPQGNLSNKLDYKISDYHIDFVHGQNNHDFNYTVDISLTSQKPEIVLALWQSFRISQTSFNGAPIPSIKKDENLVYVDLPGKTLEGTLRMDIATDSYDKITPNTFELISTSPWYPMHPKEALNPYHNGVKETYTITTPKASENIISNLPKQSDGRWEGEAYGPTLLRGPFMEQADLIHPEFTPLQDEKELKQSILDAVDQNNKRWNGAVTGPQKIYFLTISSEFSANPDEWFTIYRKGIMPSSMILTPLFLRPEQNFKELNLFQSFYFGDIENKDARPMYEQEYGVPFMDLIYNKYAPLTRKAETY
>NZ_CP019655.1|WP_077996483.1|167031_167481_+|hypothetical-protein
MMKNRWFAMANTLLLTVGIAAGCTGIYHPDAMGNHVLAGGNPITQPVYAAVPELEAQLIKEGNKATISYTVKNFKLSAEHFGKKHVSGEGHLHLVVDGEPKVMMKEQSRIILENIPPGKHTIKLTLQQNDHKPLHVEKEFHIEVKGGGG
>NZ_CP019655.1|WP_077996482.1|165813_166863_+|hypothetical-protein
MIQSKTAQNEASSFRMEEQDQANVILSELKRTAREYTTAALEANHPQVREQFTTLLNQTLKHQAELYEAIRSLNAYGSVPTATAQEIQSESQKQTKSAAKLRALVHQFTSASSASVSGGSSAQGASNFVHAGSVTVDEADRQDSLTNTEGPLAQGQSFAQAQGSASQKEKSLSSAPTGTEVPAFSASRVLEAEANRLTGQPDADMALSHQGHGEHKKPQPGAVLTQQLYPNAVYQPHSSQGAPATSGQAPPYQSQSPYIGSGQGYPASDITQRGITRPGQPAGSAFQGPSYPGTGHASPVYIPYGGIGGGSGGMHAPAGYQPQAGPGTGRPGGMQPLPPHGSPGGRFMP
>NZ_CP019655.1|WP_042119882.1|165550_165781_+|hypothetical-protein
MNPSSKSGLTAKELSYITDSMKNEELLTKLYVQGAVESTKPELKQVMDRHARERLKQVEQLNGLFSTFGAQSPSNQ
>NZ_CP019655.1|WP_158672704.1|164296_165298_+|DUF4340-domain-containing-protein
MRKFIPTLLALAVFIGLFWYASGHSFFKKEDETAEKTSPVFSMKKEDVQGIYVKTDKGETELSLKDGNWTMQKPQEQPINSNLVGSWLDTYVSLNREDIVEDQASDLAKYGLDKPAAEYRVTLKDGTSKVLQTGENLPTGDSVYAKLAGSDQVFPVTGQSLEQLSKAPIDFVDCSPAKFDSDKVTKLDFSWNNQTWTLIKQEPDKSMAEAKWTLNNEEIPGTMVSSRLDKLSSLSTEKLVEPASNHTDIKGELRIEVTEVKDGQETKSVYLGQSSKDLVWMMKEGGPWAYAIPVSGVQDLASQGKLTDKEKKQIEEEKTATSPSPSPSATPTP
>NZ_CP019655.1|WP_036657332.1|162917_164300_+|ABC-transporter
MNKWIRGTNATVLSLAVIGIFVILTFFLNSLSGFQLDLTKNKNFTLSDQTVNMLKSLDKDIHITAFTLPEDQEYFTRQVSDLVQEYKKRSGKITFDQYDLRKEPSKAQQYNLRGSSLVIEAGDKNVTLGYTDMFNFNQQPYSFSGEEKITQAINSLISGEKHTAYFLSGHQEIPLTKMNDFKSSLEGDNYTVKELNLLKEGKVPDDAEILFIIGAQNDLSDKEAELVKSYMDGNGKLYLALGFNKDMVTAWKNLDGIMNQYSIQDQHAIAVENSSNRTVQDPLTIFPDYGAHDITNKLSEYNMLTMMSLGISLDAKESDTWKASPLLQTSNDAYGETDIESLMKPQLPKKDDKDVAGPLKLGYAVENKDGKPKAVIMGGSTYLVDQDFRQQGNKDFALNSVNWLQEKKDQVTIRPREGDNTQTAQLSGGQAKTIFWTTVVCFPLFFLALGGLIWWRRRKG
>NZ_CP019655.1|WP_024095464.1|181842_182358_-|hypothetical-protein
MQHPLSQEATIYEYTLLRKFKMNPLFGSLYALTALVWCLKTVSFIDAGLSVLSAGVIFLLHALLLMALVKIGPYRPDTGWTWQYQLLWVGYLPTKYVKYTTMMKLHLHVFAIGGLVILAFFVWLPVLVRGDLFFFHLWILLPRFFFLMRCKQLKDVSWVLITRWTLSCYRQ
>NZ_CP019655.1|WP_024095463.1|182524_182710_+|hypothetical-protein
MEKPVVCTCTCIICGREETDGITVLDGFICEACEAEMVRTDVCDTKYPFFVHQMKKYLLKK
>NZ_CP019655.1|WP_023482262.1|182940_184374_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MIQHADGNPASFHVPGHKSGRGAMNWQAPFYESILKIDYTEIPGLDDLHQPEGAIREAQELAADCFGAEETHFLVGGSTVGNLAMILSVCRRGDLLLVQRNAHKSIIHGLMLAGVRAVFLIPQWDQESGIAAGVRLEDVSSALCTYPEAKGLLITNPNYFGMGQQLKPIADLMHAHGKPLLVDEAHGAHYGFHPELPPSALSSGADAVVQSTHKMLTAMTMGAMLHVQGSLIDRSEIKRQLTILQSSSPSYPILASLDLARRQMHIQGEADIQKGMDTVRFFRKRMEELPRFEIVSPTVNSVFDTLDPFKITVSDRRGVMSGPEIQRNLESKGCYVELATPRQVLLLFTLASTQEEAARASNAFRRMESDFCINKEELKAQAANMMNNPHVSSISAPVVFDLHPNTERINQSRSVPIHQAAGLYSAEMVIPYPPGIPVLYPGELITTETARYLEELAVQGIRFHGSREATAGYLQVY
>NZ_CP019655.1|WP_024095462.1|184444_185110_+|dTMP-kinase
MKGVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEMKDQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNRFASSGLLPNRTYLLDVPVEISQSRLTRREEGLDRIEQKGRDYHQRVREGFHQIYKENPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKMLLDGSHFS
>NZ_CP019655.1|WP_036655561.1|185142_185472_+|hypothetical-protein
MKLVIAVVQDKDSNRLSNALIKEGFRATKLASTGGFLRAGNTTFMIGIEDERVNEVFEVIKANCKVRDQLVTPVSPMGGTADSYIPFPVEVQVGGAAVFVLPVENFEHF
>NZ_CP019655.1|WP_077996488.1|185518_185965_+|YaaR-family-protein
MKINPGWHPTSKNMKVSENPVPSHTSLKNFSEMMIRHDNKVTQEQLVRLFEQIGLQGDRLSRNMTLRELRQYKLLVKKFLEETARRGVHLKDTRGWDRRGRSKRYKLLEEVDAELLQMADELLETEQGRINLLHQIGEIRGMLIHFLY
>NZ_CP019655.1|WP_042119381.1|186016_186994_+|DNA-polymerase-III-subunit-delta'
MSFQSIRGQATAKRMLQNSLREDKISHAYIFSGPVGTGRKQMAIEFAKAIYCLNGDGDSCGECRECRKVEHGNHPDLYMIEPDGASIKIDQIRELQKEFSYKSASSSTKIYIVSEAETMTTQAANSLLKFLEEPVSQVVAILITENGHALLPTIQSRAQWISFTPMPRAEMTRILIEEGFPEILVRSAVQMTAGVQAAKELIEANWFAEMRNLVIQLLKETLTRFPLSFITVQQKLIKTNLNEHMPVLFDFIILWLKDMVRLRLGRNEPFVYMDQLDWMSSLAFSRDVTDWVQMMEQAVELQKRLRSNANPQLVMEKMLVGIQGV
>NZ_CP019655.1|WP_023482257.1|186996_187806_+|stage-0-sporulation-family-protein
MYSVVGVRFKKAGKIYYFDPLELPIEKEHAVIVETARGIEYGKVVIGKKTVQEQDVVLPLKKVIRIADQADSVLVEENKKAAKDAFSICLDKIRQHQLKMKLVDVEYTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMLGGIGPCGRILCCSSFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYEHDNYESAKDTLPTVGKMVITSYGNGKVLALNMNAKTAKVQLFELGKIMDLPFDDVVEQEVT
>NZ_CP019655.1|WP_023482256.1|187824_188160_+|DNA-replication-initiation-control-protein-YabA
MDKQDIFVEVGQIEEQMGKAYEELGALKKKIIALLEENKHLMLENQQLRAVLQEKENEYIQRTSKEDVPSIGEGHDNLARLYNEGFHICNVYYGHLRTEGDCLFCLSFLNK
>NZ_CP019655.1|WP_036655555.1|188250_189006_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MTRVPLLPQERIDDLLTHGLHIIQSEEVFSFSLDAVLLARFCTVPNKGKIMDLCTGNGVIPLLLSTRTKAHIWGIEIQQKLADMAMRNVDLNMLQEQLHMIHGDLRHIYQVLGTGQFDLVTVNPPYLPVPTGEKNKNEHVAAARHEIFCTLEDVIVVASKLLRTGGKMAMVHRSSRLVDICFLMRQYRIEPKRIRFIHPRIGEEAMMVLIEGVKDGKPEIRTQPPLIVYNEQNEYCDELMAVYYGERTALE

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Crispr_ID: NZ_CP019655_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_2

943526-943620

Orphan

Consensus_repeat	Method
TCTGCTAAGAAGTCAAACGAATCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019655_2

>merge|NZ_CP019655|2|943526-943620|CRISPRCasFinder
TCTGCTAAGAAGTCAAACGAATCTGCAGGAAAACAGCATACCGGGAAACCTGCTGATAAACAAGTCTCATCTGCTAAGAAGGCAAACGAATCTGC

>NZ_CP019655|2|2|943526-943620|CRISPRCasFinder
TCTGCTAAGAAGTCAAACGAATCTGC	AGGAAAACAGCATACCGGGAAACCTGCTGATAAACAAGTCTCA
TCTGCTAAGAAGGCAAACGAATCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_036655248.1\|932763_933042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_024095136.1\|950657_950849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996950.1\|956787_958086_+\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180792
NZ_CP019655.1\|WP_024095141.1\|940294_940837_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_024095135.1\|950943_951810_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP019655.1\|WP_024095151.1\|932393_932636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_155121045.1\|934999_935152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_023485471.1\|934517_934823_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379413
NZ_CP019655.1\|WP_077996947.1\|946648_950305_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235868
NZ_CP019655.1\|WP_077996942.1\|938621_939596_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP019655.1\|WP_077996941.1\|935652_937974_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP019655.1\|WP_023483429.1\|944588_945167_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940344.1\|955569_956682_+\|citrate-synthase	unknown	unknown	gnl\|CDD\|184467
NZ_CP019655.1\|WP_077996949.1\|952766_954521_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP019655.1\|WP_077996948.1\|951799_952774_+\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP019655.1\|WP_024095139.1\|945163_945496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379432
NZ_CP019655.1\|WP_023485469.1\|937970_938600_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP019655.1\|WP_077996940.1\|933196_934534_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226594
NZ_CP019655.1\|WP_155121044.1\|941183_941360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_023483422.1\|954701_955148_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_077996950.1\|956787_958086_+\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NZ_CP019655.1\|WP_077996940.1\|933196_934534_+\|CBS-domain-containing-protein	gnl\|CDD\|226594	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription].	0
NZ_CP019655.1\|WP_024095135.1\|950943_951810_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	7.58132e-161
NZ_CP019655.1\|WP_023483422.1\|954701_955148_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.22363e-42
NZ_CP019655.1\|WP_077996947.1\|946648_950305_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235868	PRK06826, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_CP019655.1\|WP_077996942.1\|938621_939596_+\|hypothetical-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.23465e-21
NZ_CP019655.1\|WP_077996941.1\|935652_937974_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.35658e-30
NZ_CP019655.1\|WP_023485471.1\|934517_934823_-\|hypothetical-protein	gnl\|CDD\|379413	pfam14007, YtpI, YtpI-like protein. The YtpI-like protein family includes the B. subtilis YtpI protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 73 and 101 amino acids in length.	2.5182e-21
NZ_CP019655.1\|WP_079940344.1\|955569_956682_+\|citrate-synthase	gnl\|CDD\|184467	PRK14034, PRK14034, citrate synthase; Provisional.	0
NZ_CP019655.1\|WP_077996949.1\|952766_954521_+\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP019655.1\|WP_077996948.1\|951799_952774_+\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP019655.1\|WP_024095139.1\|945163_945496_-\|hypothetical-protein	gnl\|CDD\|379432	pfam14034, Spore_YtrH, Sporulation protein YtrH. This family of proteins is involved in sporulation. It may contribute to the formation and stability of the thick peptidoglycan layer between the two membranes of the spore, known as the cortex. In Bacillus subtilis its expression is regulated by sigma-E.	6.15062e-40
NZ_CP019655.1\|WP_023485469.1\|937970_938600_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.77369e-44

>NZ_CP019655.1|WP_155121044.1|941183_941360_+|hypothetical-protein
MDNRIPFRGELEKAIDETGCTLSQLEEKGGTQIGNLSACLSRQIAPTYHIYSRILVYG
>NZ_CP019655.1|WP_024095141.1|940294_940837_-|hypothetical-protein
MKLSKIKYFLVFASLVMFFSSVGAPIAGATNMDYDQRLKETEEILEFIGEHAVLTDEYDNIIGLDFDKIRERYGQDKGLDLLEKEVKEKTENNRSAWLDCMKSALLDYFGVNIFESLIGGGVLTYIKAKAWKEAAKLIIRYVPGVSVISLVATLVYYSGKCAIWGMKEENGIEGKQHVYT
>NZ_CP019655.1|WP_077996942.1|938621_939596_+|hypothetical-protein
MNPQVWKEINEITDRYFTEPDLNGLLKKSIADKAEETSIWSEMTLYIHRMFGGNNPCLYRLGALTELLILGLDIMDDLQDKDNTGKVWMAMPEAAAMNVMNGMLMAALAELGEMKKEYAGQPFPCASEVSRMITTAINGQHIDIMGKVQTEEEYVAMVQQKSCTLFRLSFYLGYSSAGPNLVSDLEAEQLQQFAVYAGMLGQLQNDIQDLTRYDIKNDLLYKKRTLPILYLLAEDESDFPPIHQFYRSEITWEEFLTYKLECLEYIDECGCVEYVSAIRHLYATHANQLLDEIRVRNEWKERLRDVLLGAYNNEVMEEAEIKEG
>NZ_CP019655.1|WP_023485469.1|937970_938600_+|response-regulator-transcription-factor
MNREWTVLIVDDHPAMAFGTKMILEARENIRVIGIASSGEEGLSLVKSERPDIVFLDFHLPDMTGLEVASGMMKTHEELKIVIFTGIDFMPILNNLLSLGISGIMSKDSSEEQITNMVNCLIEGQTAISLELFRQLQLGKGEDDGTALTDEEINIMNQIIKGATNEQIAEVIHMSKRSVDNYVRKIYDKFGVKSRAQAIEKFIQMKRPV
>NZ_CP019655.1|WP_077996941.1|935652_937974_+|hypothetical-protein
MKLMKYIRWLIPVFLVVQIWTVYITFTYPYLGIVVFQNEQGQWQVNEFQKKSEGSNLVHKGDIVLSIDGQEPGDYFTVKKWKGIEQAGNIVVERDGGRIYSVDTRNLPHPVAPGFIYLLAELLSIGFALLLMKKAGKSKSARLLALVFINIALLYMNVGASERGDTLAKVLISNFMPILPFVFLKFLIEFFREKTGVHCKDGYLRFLYPTLTVIFVLRFSLFLPNADYGTYQANFIAIAVFLLIGLILNFWLLISIYYRYAETHAYLAMILRTVMFSLFISFFPVVGLTFLPQVLFQQEIGYSFYNSWFVHFFPMSFAYLILSKQIYDIEIILRRLLYTTIISIIPSVVLTAVITGLLYKDTHLEKILLTFITILLVMSVLIYSLEYLATKLEKIMFPRKYYLQTALKKVAKDLEVITSFRELKEIVLVDIVNTLQVHGAAFVIQYPNDIEVIGEGMIDPTEVENQFNNRSWNEMGYTVAEINKHEEYNSYLVLTRKKTNTYMNREELQWLNLIITYLSVSMENLYLIRKLHMRLHELASELPNQENGGDYVWFRKTMFELQEKERTRIASDLHDTTMQDIFFVIRKLKSLQKQLTQTEDLRQIRDILNHLELINVNLRQCCFELNPYMLKNIGLIGALRNLIDIESGLGSYEIQLITSGNLEEIEQMEDEKKRHIFRMIQELITNGRKHARADHLNIKLQAEKGQLLVMYEDDGIGFQTESVATKVLGKSGMGLEQMKSRALHLNGLMDISSEKGSGVRISIKIPVKEGVRA
>NZ_CP019655.1|WP_155121045.1|934999_935152_-|hypothetical-protein
MKQVHFDQLFDDVWNETLDECIHAIEIPTRTIHYSLEAVLEHLEAGEQTL
>NZ_CP019655.1|WP_023485471.1|934517_934823_-|hypothetical-protein
METVQMFLFIAIVVMLVISVWFSLKYRREKDPVTRGLNAARMNIAMGIMLIIISITQLFFFTDSITRRIFGTVCLLLGLFNLFAGIRNNGHYSRLMSKNDR
>NZ_CP019655.1|WP_077996940.1|933196_934534_+|CBS-domain-containing-protein
MDQVNTQSMTKHEQILRYIESLKLGTKISVRKIADQLEVSEGTAYRAIKEAENLGLVSTKERVGTVRVGKKLRQNIDKLTFGEVVNIVDGEVLGGKNGLQKTLNKFVIGAMELDAMVRYIEPGSLLIVGNRTGAHGLALKQGAGVLITGGFTTTDVIKELADEMGLPIISSSYDSFTVASMINRAIYDRLIKKKIMLVEDIISSHTPVYSLKATSTPDDWKNLLEQTGHSRFPVVDEWNRVIGVVTSKDMVGADPDQTVDKLMTRNPLTVYPSTSIASAAHTMVWEAIELLPVVDSNRKMLAVISRNDVLKAMQYIQKQPQHGETFEDLICTGFEESRDESGGLLYKGVITPQMTNHLGTVSEGVLHTLITQAAFRAVQDVKRGDLVMDNISIYSIKPVQIESEIIIKPQLLEVSRKFVKIDVSIHHQQMLVCKAMLTAQVIDRS
>NZ_CP019655.1|WP_036655248.1|932763_933042_+|hypothetical-protein
MKGLKNVIYMSLAVGMLIYALPKLNLGEGFTLPTLFGVVWVCFALFVVAAHLHELLGVDEERRQQMNRVQRMKKWQTEQTLQGRRKILQLRK
>NZ_CP019655.1|WP_024095151.1|932393_932636_+|hypothetical-protein
MKTLHSSFRISRSEAKPTYRSSKQRLRSLEEEWLELQKFEERRTKKSLQFMPETLKWFGIFGLSAMVIIAMMSIFVDMLR
>NZ_CP019655.1|WP_023483429.1|944588_945167_-|hypothetical-protein
MKIPSFYRASRLLPGIGLFLSGVIIGSSIFMGVYHQNFNFLVVELRKLKSDNERLSLDLESLTKFKDKQTVIQRVTVHLKDSQTPPLNEDIRKELEKKVQNDMKVVVGQKVNSVNDSLELYEKLISDRTYYGVFEKDYVVRVKAIMLVKNELVFWIAALERKPGAAGAPSDTEENKGKSQWFSPKKDDPFTM
>NZ_CP019655.1|WP_024095139.1|945163_945496_-|hypothetical-protein
MSDFITDMILDFFIAFGVVLGACMMGAVGSVLSLQPPTENMLLLAERIKIWAMVAAIGGTIDPIRVIESHVAGGDLSPAIKQIMIIVSAFMGAHMGATVIHWIAKGGGSV
>NZ_CP019655.1|WP_077996947.1|946648_950305_+|DNA-polymerase-III-subunit-alpha
MSSFVHLHVHSEYSLLDGAARIHDLTERAAELGMSALALTDHGVMYGAIAFYKACKQRGIKPIIGCEVYFTTGSIRQKGNRQEQPIYHLILLAKNNTGYRNLMKLCSIGHLEGFHYKPRIDAEHLAAHSEGLICLSACLGSEVSQHLLHDRKEDARKAAERYRSIFGEDFYLEIQDHGMMEQKKVMHSMIELSRETGIPLIATNDVHYVREPDHEVQDVLICIGTGKTVEDEDRLKMGTSQLYLKTREAMAALFAHVPEAVLNTEKVAAQCQVEIELGHSILPSFEPIPESLTAAEYLKQLCLEGISGRYGTRQEWNDPSSDFRKQVEQKLYYELDVIESMGFSDYFLIVWDFIRYAHEQGIMTGPGRGSSAGSLVAYALNITDVDPIEYNLLFERFLNPERITMPDIDIDFNDERRDEVIDYVVRKYGKERVAQIITFGTMAAKAAVRDVGRVLNLPYNEVDKAAKLIPNHLGMTIDHALEVNSDLRELAEKQPKTAELLNMAKRVEGMPRHASTHAAGVVISRDPLTDYVPLQEGTEQTTLTQYSMEHLESIGLLKIDFLGLRTLSIIERTLAWIKEQEGKLVDWTQTDKSDPKTYELLSRGETTGVFQLESPGMRRVLKELKPSRFEDIISVLALYRPGPMEFIPQYIACKHKQTEPVYPHPSLETILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDEQRSHFVEGSLGQGFTAEEANHVYDMIVRFADYGYPRAHATAYGVLAFQTAYLKAHYPRHFMASMLTAVTGNQRKMAEYVDECRRMKLDVLPPDINESGVLFTPVASPGFGTEPARYAGEPAEEGMADKIPVNGAIRFGLAAIKNVGASAIEAVLKERRKETFTSLLDFCRRVDLRICNKRVIESLIQAGAFDTLPGHRAQLVAMLDDTAEAALKWRKEKDDLQLHLFGFVEEPHWEVEVPDVPMLTKLQQLDYERELIGMYLSGHPLDAHEDLLGRLEADPLYQLQEYPDHSEVVVAGMVASSKTIVTKRGEPMAFMELEDRIAKVEIVLFPKVWKGAAPLVQKGRVVFVKAKLQHQDEDMPKLLADVVCGPDDPAIYQLFYKNGDIRKNGAVHNGQVSFGKSGSHSRQKVLTVDNAGEAGIGKTGKNQRVYIKISPDHEEQGKLVPLKQLLQKHSGHLQVALFYERNQKAVALSDAYRVKPSPELFQAVETLLGASSIRVK
>NZ_CP019655.1|WP_024095136.1|950657_950849_+|hypothetical-protein
MWTVIYIAPTANIAERIKDRLTEEGFLVQVRGVSMSKNQFEILVPEGEVEEVQEVLNSILHNK
>NZ_CP019655.1|WP_024095135.1|950943_951810_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MLKDLFQKRKYATIPSEKTKRDIPEGLMNKCPRCGTIQYSKELEKNLKVCLACGYHYKLNAMERVRMTLDDERLFEYDDQMISEDPLGFPDYKDKLAKASSRSGLKDAIVTGEGTIGGFPVVIGAMSFDFMGGSLGSVVGEKITRAVEKAIQKQYPVILFSTSGGARMQESILSLMQMAKTSAAISKLNESGGLFVSVITDPTFGGVTASFAMLGDIILAEPASSFGFTGRRVIEQTIREKLPNNFQTAEFNLQHGQLDKVVHRKEMRATLTAILDMHMMKGDANYGG
>NZ_CP019655.1|WP_077996948.1|951799_952774_+|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha
MAGELSFEQPLVELRAKIEELKKFGEEKQIDFSEEIKRLEERYEQLENELYANMSTPQRMQLARHPGRPTAMDYIQSIFTDFIELHGDRLYGDDLAIVGGIAKLEGRPVTVIGHQKGKDTKDNIARNFGMPHPEGYRKALRLMQQADKFKRPIITFIDTKGAYPGIASEERGQGEAIARNLLEMASMRVPIICIVIGEGGSGGALALGVGNRVLMLENSIYSVISPEGAASILYNDASKSLHAAEAMKITAKDIEKLGVIDGTIPEPKGGAHRDWEKQADYIKAALLEHLQPLLTMSEQELKEDRYRKFREIGRFTFTQEGNHA
>NZ_CP019655.1|WP_077996949.1|952766_954521_+|pyruvate-kinase
MRKTKIVCTIGPASESLEILKKLMNAGMNVARLNFSHGDYEEHGKRIQTIRQASQETGKNVAILLDTKGPEIRTGNLKEEPIELVQGNKITLTTEEILGDANRISVTYQNLPKDVQVGSTILIDDGLIGLRVDSINETDIECTIVNGGPIKSKKGVNVPGVKIALPGITEKDANDIRFGIEQDVDFIAASFVRKASDVLEIRELLEQHNATHIQIIPKIENQEGVENLDEIIEVSDGLMVARGDLGVEIPAEEVPIAQKEMIKKCNLAGKPVITATMMLDSMQRNPRPTRAESSDVANAVFDGSDAVMLSGETAAGKYPVEAVQTMARIAERTEQALQYREIFLHRANALQVTVTEAISQAVANAALELEAKAIITATESGFTARMVSKYRPESPIIAVTKTERMMRRLSLVWGVHPVLRGHASTTDELFEQAVESSLKTGAVSLGDIVIITAGVPVGSSGSTNLMKVHQIGEMIGKGTGIGSQNITGNVCSASSAEEALNKMTDGAILVARSTDKDYMPAIEKASALITELGGITSHAAVVAVSLGIPVIVGVERALDLMKDGMEVSVYPEVGVIYSGRARVL
>NZ_CP019655.1|WP_023483422.1|954701_955148_+|acyl-CoA-thioesterase
MSFPWKEHHLRVRYAETDAMGVVYHANYLIWLEVGRTEFIREMGYPYAKMEEQGLLLPVVETNLRYRRPAKYDDAITVYSRIESFTPSKIIFTYEIRRKAEAEQQNEDPAGELLVTGTTVHVWINRSWNPVRIDKEAPELFLFLQENA
>NZ_CP019655.1|WP_079940344.1|955569_956682_+|citrate-synthase
MTATKGLEGIVATTSSISSIIDGVLTYRGIDIDELAERASFEEVIYLLWFGKLPNRAELEQLRKDLNENMSIPDGIIQQLKLYPKDTNSMAALRTAVSSLSFYDREAGDMSREANIRKAIRLQAKLPAVIAAFARIREGKEPLPPAGHDTIAANFLYMLTGEEPHSTAAEALNKALVLHADHELNASTFAARVTVATLSDIYSGITSAIGALKGPLHGGANEAVMAMLEEIGTEDNIRPYITKKIEHKEKIMGFGHRVYKTGDPRAKHLQQMSKELGESTGDLKWYNMSIRIEELIHNLKGLKPNVDFYSASVYTALQIPRDLFTPIFALSRTAGWAAHILEQYENNRIIRPRAEYTGPVNQRFIPIESR
>NZ_CP019655.1|WP_077996950.1|956787_958086_+|NADP-dependent-isocitrate-dehydrogenase
MPQFESYSLPAEGERITIENGKLQVPNNPIIPFIEGDGTGPDIWASAQRVLDAAVEKAYKGEKKIAWYEVFAGEKAFNKFGSWLPNDTLTAIREYIVAIKGPLTTPVGGGFRSLNVALRQELDLYTCLRPVRYFDGVPSPVKRPELVDMVIFRENTEDIYAGIEYQEGSEEVKKVVEFLKNEMGVNKIRFPETSGIGIKPVSKEGSSRLIRAAIKYAIKHNRKSVTLVHKGNIMKFTEGAFKNWGYELAEKEFGDNTFTWAQYDRIKEEQGVEAANAAQKEAEEAGKIIVKDAIADIALQQVLTRPNDFDVIATLNLNGDYLSDALAAQVGGIGIAPGANINYVTGHAIFEATHGTAPKYAGLDVVNPGSVILSGVMMLEHLGWLEAADLIYKGMAVSINNKTVTYDFARLMEGAKEIKCSEFGSEIIKNMD

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Crispr_ID: NZ_CP019655_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_3

1575788-1577641

Orphan

Consensus_repeat	Method
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CRT

27 spacers

The CRISPR arrays of NZ_CP019655_3

>merge|NZ_CP019655|3|1575788-1577641|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAATAATATGGAGCATCTGATGGAACTGGTTTAATGCGGGTCGCATCCCATGCGGATGCGTGGATTGAAATCCATATACCACAAATGACGCGACCCAGTTGATAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCTGTCGCATCCCATGCGGATGCGTGGATTGAAATGAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTTCCACATCCTTAAACCGGGCAAAATATTCCGGTCGCATCCCATGCGGATGCGTGGATTGAAATACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGAGTCGCATCCCATGCGGATGCGTGGATTGAAATATTTTCTCAAAAGTTTTCCCGTCAACATGGACCGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTTAGCCATGTAAATAATCCCCTTTCGCTAACGTCGCATCCCATGCGGATGCGTGGATTGAAATTTCTCTTACATCAACAATCCCTTTATAAATAAAGAGTGTCGCATCCCATGCGGATGCGTGGATTGAAATCCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTAGTCGCATCCCATGCGGATGCGTGGATTGAAATTTTTAATATCGCATTGCCTAATCGCGTTTTAAGATCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTAGTCGCATCCCATGCGGATGCGTGGATTGAAATCCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTTGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTTGGGCAGTATTGGTCACCTCCGATCGGATAGTCGGTCGCATCCCATGCGGATGCGTGGATTGAAATTACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACAGTCGCATCCCATGCGGATGCGTGGATTGAAATGCTAATGGAAAACAAAGAGAATCATATATCAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCTTGAAAACTCCTGTTTTATTGTTCATCATGGAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGCGTCGCATCCCATGCGGATGCGTGGATTGAAATTCCAATTACCGGACAATGGCCAAGAAAAAAGAAAGTCGCATCCCATGCGGATGCGTGGATTGAAATTGGCCGCCCCTTGGATATTCGTACAACGCACTTTCGTCGCATCCCATGCGGATGCGTGGATTGAAATTAATTCAAGTGATACGACCATAGCCGCATTGATGTAGTCGCATCCCATGCGGATGCGTGGATTGAAATATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTCGTCGCATCCCATGCGGATGCGTGGATTGAAATATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGCGTCGCATCCCATGCGGATGCGTGGATTGAAATATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAAGTCGCATCCCATGCGGATGCGTGGATTGAAATCATCACCGGGGTGCAGATTTATTGTCAGCGATTTTGTCGCATCCCATGCGGATGCGTGGATTGAAATACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCACGTCGCATCCCATGCGTTCCGTCTTTTGGAATG

>NZ_CP019655|3|1|1575788-1577571|PILER-CR
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>NZ_CP019655|3|3|1575788-1577571|CRISPRCasFinder
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT

>NZ_CP019655|3|1|1575788-1577641|CRT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	AATATGGAGCATCTGATGGAACTGGTTTAATGCGG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCATATACCACAAATGACGCGACCCAGTTGATA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGAGTCTCTGTTTTGCAGTAATAGCCCGGGCT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GAGAGATTCTACCCGTTTTACTTCCGACAGCTTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTTCCACATCCTTAAACCGGGCAAAATATTCCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACATACGTTGAGCTATTCGCGGGCATCGGAGGATTTCGA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTTTCTCAAAAGTTTTCCCGTCAACATGGACC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTTAGCCATGTAAATAATCCCCTTTCGCTAAC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTCTCTTACATCAACAATCCCTTTATAAATAAAGAGT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCAAAGCGTTAGTTCTCTTCGGTTTACTTTGTTTTTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTTTAATATCGCATTGCCTAATCGCGTTTTAAGATC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCAAGCTCGGCGACCTCGGCTCTGCGTTGGTCTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CCTTGGGCGTCGAAAAATTCAATACCCGTTTGCTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TTGGGCAGTATTGGTCACCTCCGATCGGATAGTCG
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TACAACGTCCCTTTTAGCTCCGTTTAGTTTCTCGTACA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	GCTAATGGAAAACAAAGAGAATCATATATCAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CTTGAAAACTCCTGTTTTATTGTTCATCATGGAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCGAAGTAATCACTTCCAGCCCGGGATATCTTTAGGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TCCAATTACCGGACAATGGCCAAGAAAAAAGAAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TGGCCGCCCCTTGGATATTCGTACAACGCACTTTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	TAATTCAAGTGATACGACCATAGCCGCATTGATGTA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATGTTTGCGTCAACGACGGCCTGTTGCTGCTTGCTC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATTAAAAATTTACCAAGTCAAGCCATTGACTGGGGAGC
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ATCCGGTGCATCAGAGATTGGCTCAACTGTATTTCAA
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	CATCACCGGGGTGCAGATTTATTGTCAGCGATTTT
GTCGCATCCCATGCGGATGCGTGGATTGAAAT	ACCATGAGTTTGCAAAATACATTCAGCGAGAAAATCAC
GTCGCATCCCATGCGTTCCGTCTTTTGGAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_149867785.1\|1577670_1577970_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997661.1\|1569820_1570084_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379729
NZ_CP019655.1\|WP_079940564.1\|1581300_1582167_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP019655.1\|WP_077997279.1\|1570096_1570402_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_104932621.1\|1584157_1585027_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019655.1\|WP_079940562.1\|1572700_1573393_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995375.1\|1578326_1579550_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_158672749.1\|1571947_1572682_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379612
NZ_CP019655.1\|WP_077997289.1\|1585143_1585998_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235445
NZ_CP019655.1\|WP_077997277.1\|1569204_1569531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997286.1\|1580150_1580555_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP019655.1\|WP_077997290.1\|1585994_1587143_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179997
NZ_CP019655.1\|WP_077995375.1\|1570642_1571866_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_036654509.1\|1583453_1584137_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP019655.1\|WP_077997287.1\|1580565_1581297_-\|RNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211346
NZ_CP019655.1\|WP_077997288.1\|1582370_1583387_+\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|235445
NZ_CP019655.1\|WP_158672748.1\|1567206_1568172_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP019655.1\|WP_158672750.1\|1573432_1574476_+\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP019655.1\|WP_077997276.1\|1568918_1569227_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940561.1\|1568242_1568869_+\|DUF3885-domain-containing-protein	unknown	unknown	gnl\|CDD\|379022

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_077997287.1\|1580565_1581297_-\|RNA-pseudouridine-synthase	gnl\|CDD\|211346	cd02869, PseudoU_synth_RluA_like, Pseudouridine synthase, RluA family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.	6.13598e-57
NZ_CP019655.1\|WP_077997661.1\|1569820_1570084_+\|hypothetical-protein	gnl\|CDD\|379729	pfam15542, Ntox50, Bacterial toxin 50. A predicted RNase toxin found in bacterial polymorphic toxin systems that is proposed to adopt the BECR (Barnase-EndoU-ColicinE5/D-RelE) fold, and contains two conserved histidine, a serine, two lysine, and a threonine residue and a HxVP motif. In bacterial polymorphic toxin systems, the toxin is usually exported by the type 2, type 6, type 7, and MuF-type secretion systems.	9.78244e-31
NZ_CP019655.1\|WP_079940564.1\|1581300_1582167_-\|SAM-dependent-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	2.13525e-43
NZ_CP019655.1\|WP_104932621.1\|1584157_1585027_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.10138e-47
NZ_CP019655.1\|WP_077997288.1\|1582370_1583387_+\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP019655.1\|WP_077997289.1\|1585143_1585998_+\|hypothetical-protein	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	7.01558e-178
NZ_CP019655.1\|WP_158672749.1\|1571947_1572682_+\|hypothetical-protein	gnl\|CDD\|379612	pfam14449, PT-TG, Pre-toxin TG. PT-TG is a conserved region found in many bacterial toxin proteins. It could function as a linker that links N-terminal secretion-related domain and C-terminal toxin domain. It contains a TG motif.	8.07702e-14
NZ_CP019655.1\|WP_077997290.1\|1585994_1587143_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP019655.1\|WP_079940561.1\|1568242_1568869_+\|DUF3885-domain-containing-protein	gnl\|CDD\|379022	pfam13021, DUF3885, Domain of unknown function (DUF3885). A putative Rac prophage DNA binding protein. This domain family is found in bacteria, and is approximately 40 amino acids in length. There is a conserved YDDRG sequence motif. There is a single completely conserved residue D that may be functionally important.	4.34863e-09
NZ_CP019655.1\|WP_036654509.1\|1583453_1584137_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	7.48767e-10
NZ_CP019655.1\|WP_158672748.1\|1567206_1568172_+\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	8.80093e-24
NZ_CP019655.1\|WP_077997286.1\|1580150_1580555_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.215e-24
NZ_CP019655.1\|WP_158672750.1\|1573432_1574476_+\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.6884e-22
NZ_CP019655.1\|WP_077995375.1\|1578326_1579550_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
NZ_CP019655.1\|WP_077995375.1\|1570642_1571866_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145

>NZ_CP019655.1|WP_158672750.1|1573432_1574476_+|RHS-repeat-associated-core-domain-containing-protein
MFFNHCCNLEQTIRPDGSKETRTYDAAGQLLTLSDRAADGSSISEYTFTYDANGNVSTEDNKVPDITVQGPEQKGAGLSPSTLLAGKAEMTYGKDNRLDTYNGMKVEYDADGNQITGPLGESRESFKYDARNRLIQAGQTAYAYNSENNRISVTKGNSVTKYVVNPHAMLSQILMETDGNGKGQAWYVYGLGLIGREDSEGTYQTYHYDRRGSTAALTALSGEVTDRYVYGPYGELLRKTGDTKQPFLYNGRDGVVTDDNGLYYMRARYYNPDIKRFINRDVLTGSISVGQSLNRYAYVNGNPVSYVDPFGLSRDSDTSPYAHAANFVLDFIPFVGSVKGAYEAFTA
>NZ_CP019655.1|WP_079940562.1|1572700_1573393_+|hypothetical-protein
MRYWLELDHDVFSFFQWFSKDKVKNILGYEPKLSVFSINGSMIFNQEDKKKFNELCGNILNKVASQRSYMENFRYYLFVIEISNNNPKISVYLKLWKKIMRKWDLSKFILGPEVEYVDRGNLYYTGIAEFNLMDLPSVLEIVGSNSGRYSIFASRKQNILTKDYTRSLFDSIFIIGNRKKEIDIVKMVLKICIEGDLVFRWGDSSEECELDIIIPENNLQVFDGISLEQS
>NZ_CP019655.1|WP_158672749.1|1571947_1572682_+|hypothetical-protein
MEPSFLHNYTDSTLTGSISVGQSLNRYAYVNGNPVSYIDPFGLSRDSDTSPYAHAANFVLDFIPFVGSIKGAFEAFTGVDVITGETLSASDRWAAGIGSVLGALSIPGAKQGGKYLTKGTIELEEQLEKSLVSAGTSKYRLPMDLQLFAGRGNRPPNLTPHGAGRRGAFREAKRNSGVPVTQQPEKVSPAVDRRGNRIPGRDYDFGNGKVIREHSGGHIFPDDPSQNRGPHFNDIYGNHYDYGN
>NZ_CP019655.1|WP_077995375.1|1570642_1571866_-|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019655.1|WP_077997279.1|1570096_1570402_+|hypothetical-protein
MDSLIQSISGYPNGTILVVEWTDGKKIRGWIDTIFETDNGIELDDENYQEYYAFLIRVQSVLQKPLLKNEKKPVGSLIEVSERDNISKISLEDGTVIWKSK
>NZ_CP019655.1|WP_077997661.1|1569820_1570084_+|hypothetical-protein
MHAGKQGKHIPGHSNYQYGKSILTANAQKLLEKYAGKGEWIGQNKERVDFGEIIGKYVDPITGEAIETNKGIIHYSKNGAHIVPARP
>NZ_CP019655.1|WP_077997277.1|1569204_1569531_+|hypothetical-protein
MEKLLSVEFPERDILVSQLKNAKVIGNYLCGCRTIDINIDSTCSKFPNSKRVPVEMIIHNGQSAPIIFYLHVLNGYIKELEIFKADSKPISEKFELNNAQININVKND
>NZ_CP019655.1|WP_077997276.1|1568918_1569227_+|hypothetical-protein
MDMVEGTGLDIEIVNRTIANGVTKQNLSKGQFYKGVVKVEDKTIEYISYGLGDGKINHRDILSKIINCEELNYVKSSLAELVSTRKKFYRRRESLVGKTSKC
>NZ_CP019655.1|WP_079940561.1|1568242_1568869_+|DUF3885-domain-containing-protein
MNCWSELDEYILDKFGDLELKKPLFYNARYGLRFDLGSDLEINQGRVEQVYYRSKSLFYEINSNEDELFFVIFADFWNDEPMLTIKDEVINVFQNYLKDFSIAEINQVVIPYRYKEDDEDDTMTLRVYIKRKVKDIKLDDLLVSMADGNVYGDIYLINSKKHVIYDLYDDRGLDIISCYKESLYKLYTDYNNWILEYDRKRIDKIFLS
>NZ_CP019655.1|WP_158672748.1|1567206_1568172_+|hypothetical-protein
MAPFIFWNLAFYTIIRTQLRGSTVALTALSGEVTDRYVYGPYGELLRKTGDTKQPFLYNGRDGVVTDDNGLYYMRARYYNPDIKRFIKRDVLTGSISVGQTLNRYAYVNGNPVSYVDPFGLSRDSDTSPYAHAANFVLDFIPFVGSIKGAFEAFTGVDVITGETLSASDRWAAGIGSVLGALPIPGAKQGGKYLTKGTIELEEQLEKSLVSARTSKYRLPMDLQLFAGKGKGKNTTTLWDVKTNAKAKISYNFHGQKVTAYQDNTKKGYWWAKDTTRHGGSAYKVYEKRGNELHWISDADEYGNFIANKHKSITGTIIKLR
>NZ_CP019655.1|WP_149867785.1|1577670_1577970_-|hypothetical-protein
MMKHVKSKMAIIFSILAALLIIPIPSSAATQQDCSSEIGSSCKQVIMNFSDHDAQSEALYLTRGTDIQYWFDSSSSSKHLVNVGVIRYPDYYLVNQFVV
>NZ_CP019655.1|WP_077995375.1|1578326_1579550_-|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019655.1|WP_077997286.1|1580150_1580555_+|MarR-family-transcriptional-regulator
MYSNEFAKFWSKLSKELRMKMEDQLSPTITEGQLHVLELLNQQGCMKPSDFIEYLETTPAAVTTLLDRMERGGLIKRVRDEKDRRIVWVHVTDKGKAECSRGIEIRDELLKSYLNRISAHNQQLFVYLLGKVAG
>NZ_CP019655.1|WP_077997287.1|1580565_1581297_-|RNA-pseudouridine-synthase
MAGPKHAPDGGGSIPVLFEDNHLLVVEKPVNMPTQEDSSRDPDLLSVLKADLKHRYGKPGNVYLGLVHRLDRPVGGVMVFAKTSKAASRLSDAVRTRAFDKTYLAVVHGKPADPQGTLRHHLRKDTRTNTALVVRPGAEGAKEAILDYRVLGHAEGLSLVQVKLHTGRPHQIRVQLAAIGCPLYGDQRYGAGRNKPGQQLALWSALLAFSHPTLKEPLRFTAAPPDTYPWYLWKELIAKLKLD
>NZ_CP019655.1|WP_079940564.1|1581300_1582167_-|SAM-dependent-methyltransferase
MFVADKWSDYELIDTGGGEKLERWGSYILRRPDPQIIWPLEQDRGMWRKADGHYHRSSSGGGSWDFRKDLPERWTISYDNKLRFHIKPTGFKHTGLFPEQAANWDWMIHKIQQAERPVKVLNLFAYTGGASVACAYAGASVVHVDASKGVVQWAKENLQLSGLGDRHVRFITDDVFKFVQREQRRGNQYDAIIMDPPSYGRGPNGETWKLENDLYPFIESCTAILSNTPLFLLVNSYTTGISSTVIENVLTLVMKKRYGGRLTSGEIGLPITKSGLVLPCGILGRWEA
>NZ_CP019655.1|WP_077997288.1|1582370_1583387_+|1,4-alpha-glucan-branching-enzyme
MTKLLPSPKDLYLYREGTLFFSYLTMGAHLVTEHGQEGVRFTVWAPHAAEVRVAGDFNGWTTKDHRMKQAGDPEVWSLFIPGVSEGERYKFEIHTADGRVLLKADPYAFYAEKRPDTASRVYNLYGYEWGDSDYIKRKKKEAPYQQPLLVYEVHLGTWKRNGTGEDSAYSYRELADKLVPYAARMGYTHLELMPLAEHPFDRSWGYQVTGYYAVTSRFGTPHDFMYFVDKCHQYGVGVIMDWVPGHFCKDDHGLRQFDGEPLYECENPLMAEKPEWGTLAFDFGKPEVVSFLISNALFWMDMFHIDGLRVDAVAHMLYLNFGKPESMRTTNSLGGEEN
>NZ_CP019655.1|WP_036654509.1|1583453_1584137_+|helix-turn-helix-domain-containing-protein
MSHKAKVSGSEKIAAVEKYLRGEDSLNHLAALLDVRHSSVRQWLQTYQSLGPNGLLQTSQNASYSAELKRIAVEDYLAGGGSHMDICKRYGIKSTCQLRDWILKYNSHEKLNTSGTGGVPIMTKGRTTTYDERVEIVRFCIEHQHNYAQTADKFQVSYQQVYSWTNKYLTSGVDALQDRRGKRKSEDEMSEVEKLRAQNKLLQAENRRKQMEIDLLKKLDEIERRRF
>NZ_CP019655.1|WP_104932621.1|1584157_1585027_+|IS3-family-transposase
MYLAIRGLRETKSYPICQLCDLIGIQRSSYYKWINRKESINEIFNKALLPMIKDAYEEKDGILGYRQMTIKLNRERHVTVNHKRIYRLMGILGLKSVCRRKRKNYIHSTPEITAENILNRDFESSEFGTKWLTDVTEMKYGNQNKAYLSAILDLSDKSIVSFVVGHSNNNELVFKTFDIAHMTYPDATPLFHSDRGFQYTCKIFKKKLDDAGMIQSMSRVSRCIDNGPMESFWGMMKSEMYYLRKFYTYEELEAAVIEYIDYYNTRRYQKRLNCMTPLEYRQYLLSSAA
>NZ_CP019655.1|WP_077997289.1|1585143_1585998_+|hypothetical-protein
MMAEDSTDWPDVTKPVYESGLGFNYKWNMGWMNDMLSYMKLDPIHRRYHHNLITFSLMYAFNENYILPLSHDEVVHGKRSLLHKMPGDYWQKFANLRLFYGYMMAHPGKKLLFMGGEFGQYDEWKDVSGLDWFLLDYESHRSMHRYVKELNAFYSGEPAFWEQDHKSGGFQWIHADDRTKSVVSFIRKGSRKQDEIIVVCNFTPEIYQNYRIGIPQPGRYREVWNSDAPSYGGSGKANHHQMKTDPIPWNGFPYSLSLLVPPLSAVYLKRTERKRTAGQRGEEI
>NZ_CP019655.1|WP_077997290.1|1585994_1587143_+|glucose-1-phosphate-adenylyltransferase
MKKKECIAMLLAGGEGRRLGILTKNLAKPAVHFGGKYRIIDFTLSNCTNSGIHTIGVLTQYQPHELNTYIGIGSPWDLDRKDGGVTVLSPYIRQKGGDWYSGTANAIYQNINFIEQYDPEYVLVISGDHIYKMDYNKLLLNHKKSGADATIAVIEVDWREVSRFGIMNTDETGRIVEFDEKPKEPKSNLASMGVYMFTWKSLKLYLERDKQNPLSSNDFGKDIIPAMLEDKVRMMAYSFEGYWKDVGTIQSLWEANMDLLDEDNGLDLDDKRSRIYSVNPYQPAQYIASSAEVRDSLVNEGCSVFGKVDHSVLFYGVRVEENAYVQDSVLMPHVSVGQNVTIRKAIIGEHTVIEDGAEIGDGGEIVLIGSNETIRAVSHMKG

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Crispr_ID: NZ_CP019655_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_4

1974382-1976159

Unclear

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR

26 spacers

cas3,cas5

The CRISPR arrays of NZ_CP019655_4

>merge|NZ_CP019655|4|1974382-1976159|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAATATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGTCTCTGAACTTGTAGTGGCTGGAATCACTACAGTCGCATCCTACGCGGATGCGTGGATTGAAATCTTGATCTCAAGCTGAACAACGGTGATGAACGTCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAATGATGGAGCAATATAAACACGCAACCAATTATAGTCGCATCCTACGCGGATGCGTGGATTGAAATACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAATAATATTAAGACCATGTAATTGATTAACATGTTTGATGTCGCATCCTACGCGGATGCGTGGATTGAAATTCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTTGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTTGATTAAGATACAAACTATCAATTGTGTAGTCGCATCCTACGCGGATGCGTGGATTGAAATATGGACACGAAGCACCTTTCGCAATTAGCGAACACACGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACAACATATCCTGATCAAGCGCGTTTAGTAACCTGTCGCATCCTACGCGGATGCGTGGATTGAAATATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGTGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCACGTCGCATCCTACGCGGATGCGTGGATTGAAATATACGGCAATGAATATGGGCCTCAACAAGTTCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATGCTGAACTCGATATCCATATCTGGAGATAACTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATGGCGATCAAATGGAACCCGGGGAAACAATTAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATAACCATGTAAACGACGACTTTGCCGTGTATTCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATCTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCAGTCGCATCCTACGCGGATGCGTGGATTGAAATATCTCTCTATCATGGAAAAAAATAGACGAATAAAGGGTCGCATCCTACGCGGATGCGTGGATTGAAATTTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCTGTCGCATCCTACGCGGATGCGTGGATTGAAATACACTGTCCGTCAGAAAAAACCGACTGTTCCACGTCGCATCCTACGCGGATGCGTGGATTGAAATT

>NZ_CP019655|4|2|1974382-1974617|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC


>NZ_CP019655|4|4|1974382-1976159|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAATT

>NZ_CP019655|4|2|1974382-1976158|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCAACATAATTTTGTTTTCTAATTAAAAGTAAATC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATGATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACTTCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATCCACGAATTAGGTTATACTTGACGTATCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>NZ_CP019655|4|3|1974719-1974885|PILER-CR
	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC


>NZ_CP019655|4|4|1974988-1976158|PILER-CR
	ATTTCTGTTGTACGTAGTGCTTTCAAACGTCCGGATAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGTCTCTGAACTTGTAGTGGCTGGAATCACTACA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTTGATCTCAAGCTGAACAACGGTGATGAACGTCTG
GTCGCATCCTACGCGGATGCGTGGATTGAAATTCAACATAATTTTGTTTTCTAATTAAAAGTAAATCGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAACAGTGAGCGGAATCAGAAAGCAAGCCGGTCGCATCCTACGCGGATGCGTGGATTGAAATAAT	GATGGAGCAATATAAACACGCAACCAATTATA
GTCGCATCCTACGCGGATGCGTGGATTGAAATACT	TCTTTTTCTTCAAAGGTGACCGTTTTGAAA
GTCGCATCCTACGCGGATGCGTGGATTGAAATAATATCCACGAATTAGGTTATACTTGACGTATCTGGTCGCATCCTACGCGGATGCGTGGATTGAAATTCGCAATCCGTGGAATCCAGTGGGAATCAGAAGAAGCCGTCGCATCCTACGCGGATGCGTGGATTGAAAT	AATATTAAGACCATGTAATTGATTAACATGTTTGAT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCCCTACCAAAAGGAGGGTAGGATTAGTGGAAGTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTTGATTAAGATACAAACTATCAATTGTGTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATGGACACGAAGCACCTTTCGCAATTAGCGAACACAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCACCGGCCCCTAGCGTCAGTTCGTTCCAGCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACAACATATCCTGATCAAGCGCGTTTAGTAACCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATTTTAATTTTCCGTTCCCCTCGTGTTGTTATCGT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATGCGGTGATCGTTACGCGAGTACGTAATTTGGTCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATACGGCAATGAATATGGGCCTCAACAAGTTCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GCTGAACTCGATATCCATATCTGGAGATAACTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GGCGATCAAATGGAACCCGGGGAAACAATTAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACCATGTAAACGACGACTTTGCCGTGTATTCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CTCAACGCTTCCAGCAAAAATAAACCCGGTATTGCCA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ATCTCTCTATCATGGAAAAAAATAGACGAATAAAGG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTCTTCCGTTTTGGGCCAATGTGGATAGTCTGCT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACACTGTCCGTCAGAAAAAACCGACTGTTCCAC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_079940645.1\|1987315_1988110_+\|phage-antirepressor-KilAC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377029
NZ_CP019655.1\|WP_079940640.1\|1985314_1985515_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019655.1\|WP_077584960.1\|1967289_1967889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940638.1\|1983230_1984454_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP019655.1\|WP_158672765.1\|1966039_1966738_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|131952
NZ_CP019655.1\|WP_079940635.1\|1971156_1971816_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019655.1\|WP_079940639.1\|1984479_1985178_-\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019655.1\|WP_077995249.1\|1968408_1969629_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_077997486.1\|1967116_1967302_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940637.1\|1982539_1983166_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP019655.1\|WP_155121099.1\|1985833_1986247_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131728
NZ_CP019655.1\|WP_079940644.1\|1986654_1987293_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_149867812.1\|1969910_1970987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940634.1\|1964440_1964884_+\|cyanase	unknown	unknown	gnl\|CDD\|235079
NZ_CP019655.1\|WP_079940636.1\|1979854_1982302_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP019655.1\|WP_077997489.1\|1973655_1974003_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP019655.1\|WP_079940641.1\|1985580_1985808_+\|excisionase-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP019655.1\|WP_079940643.1\|1986226_1986535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_042118951.1\|1967917_1968112_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997681.1\|1972021_1972327_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226607

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_079940645.1\|1987315_1988110_+\|phage-antirepressor-KilAC-domain-containing-protein	gnl\|CDD\|377029	pfam03374, ANT, Phage antirepressor protein KilAC domain. This domain was called the KilAC domain by Iyer and colleagues.	4.28976e-38
NZ_CP019655.1\|WP_158672765.1\|1966039_1966738_+\|phosphotransferase	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	8.35809e-10
NZ_CP019655.1\|WP_079940640.1\|1985314_1985515_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.27924e-11
NZ_CP019655.1\|WP_079940635.1\|1971156_1971816_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.06175e-21
NZ_CP019655.1\|WP_079940639.1\|1984479_1985178_-\|LexA-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.4129e-11
NZ_CP019655.1\|WP_077995249.1\|1968408_1969629_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019655.1\|WP_079940637.1\|1982539_1983166_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.47767e-96
NZ_CP019655.1\|WP_155121099.1\|1985833_1986247_+\|hypothetical-protein	gnl\|CDD\|131728	TIGR02681, Uncharacterized_protein_HI_1412, phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein. [Mobile and extrachromosomal element functions, Prophage functions].	5.40274e-07
NZ_CP019655.1\|WP_079940636.1\|1979854_1982302_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.07838e-77
NZ_CP019655.1\|WP_077997489.1\|1973655_1974003_+\|hypothetical-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	2.98878e-41
NZ_CP019655.1\|WP_079940641.1\|1985580_1985808_+\|excisionase-family-DNA-binding-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	8.18832e-08
NZ_CP019655.1\|WP_079940638.1\|1983230_1984454_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.27231e-44
NZ_CP019655.1\|WP_079940634.1\|1964440_1964884_+\|cyanase	gnl\|CDD\|235079	PRK02866, PRK02866, cyanate hydratase; Validated.	1.50577e-84
NZ_CP019655.1\|WP_077997681.1\|1972021_1972327_-\|hypothetical-protein	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	3.32428e-27

>NZ_CP019655.1|WP_077997489.1|1973655_1974003_+|hypothetical-protein
MSNPGIGLIFLIPGLEETLRINGWACITKNSELMNRMQVRGKTPLLVLEFEVEECYVHCAKAFKRSQAWEPGSWLNLPKVSKMLAAHVNCEDFTEEVIAKGLDERTFGLWNFPFP
>NZ_CP019655.1|WP_077997681.1|1972021_1972327_-|hypothetical-protein
MNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>NZ_CP019655.1|WP_079940635.1|1971156_1971816_+|ATP-binding-cassette-domain-containing-protein
MNSLNVYLDHFAFGKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>NZ_CP019655.1|WP_149867812.1|1969910_1970987_+|hypothetical-protein
MFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>NZ_CP019655.1|WP_077995249.1|1968408_1969629_-|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019655.1|WP_042118951.1|1967917_1968112_+|hypothetical-protein
MFELIASGISAGNAAQVINAVFNGLSIVSALSLCAGIAGGAAWFLSNGIGYMIKWAGKKTIIDW
>NZ_CP019655.1|WP_077584960.1|1967289_1967889_+|hypothetical-protein
MIGLIIIFCSIFFYIVSAIPVIATYFVFGESFAIILKEKGLIAAISTYPHFLPETLSTMLLLSIAFVISAKMLKIVFKNESILKNKKKILKTYLVSNVLLIFAAFIEALKIGDRKLINEIYFVSIGSKLIFSTVAVLTLISATSWNFIFASVGAIILYIIYFFANKQNTISERTRKVIARGDECLRIYSYGSRGFMPCL
>NZ_CP019655.1|WP_077997486.1|1967116_1967302_+|hypothetical-protein
MKAYISVGHKAAIFLIGLSILVGFIYGFVFEDIDQIKTIGFDGLNVLETFFQIFSIILSLV
>NZ_CP019655.1|WP_158672765.1|1966039_1966738_+|phosphotransferase
MVKPFSRRKTGPKLTTREQITRLSSYIQKLKESGYPHLPNWLVTKSGQYWVSHNGRPYYMTDWVEGSGIQSEEDYENLGRALATLHTNCKDSLPSMSRYTYKQTKLFKLQDQLFRRQLLTIRRNKSKGKWFREHGGLCIELANKSWSILRKPETKQIMEEEINHPTLIHGDVTLPNIIIHPSRPFLIDWDLLRMGSTYYETAKTLLNTTNFDPQKYLCSNKGLRTNKRVDSG
>NZ_CP019655.1|WP_079940634.1|1964440_1964884_+|cyanase
MERELAGKIIVEAKRKLGLKWADIAKVIDRSEAWTASALLGQATLSNEEAEQVASLLELDQEVAECLTEVPYRGTTIQMPPTDPLLYRFYEMLLVYGPGMKEIIHEKFGDGIMSAIDFEMDIKRVPDPKGDRVLMMLNGKFLPYKKF
>NZ_CP019655.1|WP_079940636.1|1979854_1982302_+|CRISPR-associated-helicase/endonuclease-Cas3
MKSIAHIRESDKQVQTVEEHLLEVRHLAEKFGRKLKVEHVTGLAGMLHDMGKYTHQFTEYILAATSGDSTVPKPKRGSVDHSTAGGKLLYDLFHTSNRLGCKELLAEIVGNAIISHHSYLKDFLNRDLESAYLKRVRDTQLDEYELTKETFFHQVISEREFQDYADQAAAELEQFLSKEPTVSFEVKCLFLTKFVFSALIDADRTNTRLFEANKIEETVNVEELFHVYYTRLMSKIRAFKESDDANTPINLLRSEMSEQCDQFAMKPSGIYTLSIPTGGGKTLASLRYALKHALTFHKKRIIYVVPYTTIIEQNAAEVRKILNDEANILEHHSNVIDDNHDNDEDEDGLLTVQQKLKLAKDNWDAPIIFTTMVQFLNVFFAKGSRNIRRLHNLCESVLIFDEVQKIPTSCVSLFNQALNFLKTYGRSSIVLCTATQPALNFVEQKLDIQANAEMIARIDHVIEAFKRVEIIDKVSDETFDNAKLSEFVKTLVEEVGSVLIILNTKSAAKSLYKQLNGQVIDGQGTEIPLYHLSTSMCASHRNHILQEVKEHLSKQEKVICVSTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGKDKIRKVYIIDHAEENLDRLKEIKVGKQLTKKMLVDLKHNPSVYGGHLLSRMAMERYFQEYYTKFESDLNYFIPGLGKSMMELLFSGRYETDSYYQSYARNTNEKLLLCIANSYGTAAEHFRVIDDHTTSVIVPYGKGKEVIADLNGGGTVDDLTQVLRKAQQFTVNLFEHEIQQLDRSGGLDSCMDGKVLVLREGAYNEEFGIDLENDSPVEFLGF
>NZ_CP019655.1|WP_079940637.1|1982539_1983166_+|type-I-C-CRISPR-associated-protein-Cas5
MTRNSIEFEVYGNYALFTDPLTKMGGEKLSYQIPTYQALKGILESIYWKPTILFIVDEVRVMNPVRMESKGIRPIEYGGGNTLANYTYLRDVRYQCRAHFVFNPHRPDLAYDRNEHKHHNILKRSLHAGGRRDIFLGSRECQGYVEPCQFGEGKGFYDDYDGDIHFGTMVHGINYPDETGRHQMETRLWNPVMKNGIIKFIMEHIKNP
>NZ_CP019655.1|WP_079940638.1|1983230_1984454_-|site-specific-integrase
MKGHFYKPNCKCPGKKTRKCSCGATWSYIIDVGINPKSGKRKQKKKGGFKTKQEAQEAAALLVTELVQGTYVEEKNSTFEEYAKEWLLEYQSTGTVKISTIRLRQYCMKLLISYLAKLKLSNITTKQYQHVLLDLYNKGYSKNTIAGVHQTGKMIFQRATKLKIIKNNPTSHAVIPKKQTTVEELEAERDLPKYMEKEDLALFLRTAKEKGLDRDYAIFLTLAYTGMRIGELCALKWPDINFSEQTISITKTYYNPNNNIKNYTLLTPKTKSSKRVIIVDKIVLDELEQLQAEQKRIKMLFRKTYHDKNFAFAQQDEENPGFPTYQKSIALRMTRLLKLAGLNTKLTPHSLRHTHTSLLAEAGVSLEQIMQRLGHRSDETTKNIYLHVTKPKKKEASQKFAELMSSF
>NZ_CP019655.1|WP_079940639.1|1984479_1985178_-|LexA-family-transcriptional-regulator
MKLNKTVQYQRKVLADNIKKLLETKGKTQTDMARDLGIAETTVSSWVNCERYPRLDKIQLMADYFNVRRSELTEEKTDTCRELKIRNYPYFSTVSAGLPIEVEAISSFSTETIAVPDYIMGKWAGSDDVYIMRVNGDSMNKVIPHNSLIAVKKVDLYSLKNGDIVIFSYEQEYAVKRFYIDETNRRVIFRPDSTDRSFVDFTVPFEEVGKVRINGKVVVYMVEMNGIESDGF
>NZ_CP019655.1|WP_079940640.1|1985314_1985515_+|helix-turn-helix-transcriptional-regulator
MKKQWDLTIRAARVEKGFTQQALAEKLGVSKRTVVSWERGDVEIKPYVIYSLAYVFDMDADRIRVT
>NZ_CP019655.1|WP_079940641.1|1985580_1985808_+|excisionase-family-DNA-binding-protein
MKISKINELPDILTAQSIAEYLGISRRRVYELFQLKPECGGIPNFEVGKSKRVYKDDLTQWIENKIKEKSTRIAN
>NZ_CP019655.1|WP_155121099.1|1985833_1986247_+|hypothetical-protein
MNKITAAGYDPLIKREGNVFNKYGVPLVDSREMAELLSVDHSRLVEDIYNLNVSDDIYFANFTLDYVHEGRKFIWIFYMTDDGFFLLFERYKWAAKSAMALERLKSGQATINELRKEFGLKELDDEGANVILTIKGN
>NZ_CP019655.1|WP_079940643.1|1986226_1986535_-|hypothetical-protein
MIELASKVLAALDEIKNASITDPQKAMRTYNILLYGERNNVISSNDLLQTLNNQFSVDIDKEKFSRLLSVLSELNKITCEPLTITYNPDLPASDIYLITLYS
>NZ_CP019655.1|WP_079940644.1|1986654_1987293_+|hypothetical-protein
MGCDIHLFVEKKVNGAWEALKGINEPRIQDFHSMLQRCKKRGEGTSLWGEWIKKEQEGTYDFVDIHRNYRLYAALANVRNYYYNRVKPISEPRGLPSDVSTVVKEKADEWDEAHDHSYLTVKELSEFDWDQKICFEGFVGDEQYSEFLKNGAPTWWYRDESEWGGITLCRLIQWTESLKDCVDTFYTWSIPKLIELADGDLESVRIVFWFDN
>NZ_CP019655.1|WP_079940645.1|1987315_1988110_+|phage-antirepressor-KilAC-domain-containing-protein
MNQLQVFNFTGKEVRVIMKDGHPWWVAKDVCSVLDHSDVSMAVKRLDEDEKLTQTLFVSGQNRNVWFVNEPGLYSLILTSRKPESKKFKRWVTHEVLPAIRQTGIYSLSAAPSYMIDDPIKRAEQWIREYKEKQEAQTKALMLEQRVAEYEPKITYLDRILQSKGTVTITQIAKDYEMSGQALNQILHEERVQYKQNGQWLLYREHHDKGYTKSETIDIRRRNGDQDVTMNTRWTQKGRLFIHEILKRRGIVPVMDREKKGVIA

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Crispr_ID: NZ_CP019655_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_5

1976806-1977375

Unclear

I-C

Consensus_repeat	Method
GTCGCATCCTATACGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CRT

8 spacers

cas3,cas5

The CRISPR arrays of NZ_CP019655_5

>merge|NZ_CP019655|5|1976806-1977375|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTATACGGATGCGTGGATTGAAATCAGAAGTACCCCTTGGGACATATGATGTGAAGATTGTCGCATCCTATACGGATGCGTGGATTGAAATGTGAACAGACCTCATGATGACCAATAAATGATTACGTCGCATCCTATACGGATGCGTGGATTGAAATCATTTTAGTAACAAAACTGGAATAGCTTTCGATAGTCGCATCCTATACGGATGCGTGGATTGAAATTCCTGATTCTATGACAACGTCAAAATATTTCTTGTCGCATCCTATACGGATGCGTGGATTGAAATTTTCGTAATGTAAGTTTCATGTTTTCCAGACAAAGTCGCATCCTATACGGATGCGTGGATTGAAATGTCAATATGGGATCGATAAATTTGGAGCGAATTGATAAGTCGCATCCTATACGGATGCGTGGATTGAAATGAATTTGTAAAAGTTCTACAAGATGAAGATATTACGTCGCATCCTATACGGATGCGTGGATTGAAATACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGACGTCGCATCATATACGGATACGTGGATTGAAAC

>NZ_CP019655|5|5|1976806-1977305|PILER-CR
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT

>NZ_CP019655|5|5|1976806-1977375|CRISPRCasFinder
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

>NZ_CP019655|5|3|1976806-1977375|CRT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CAGAAGTACCCCTTGGGACATATGATGTGAAGATT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTGAACAGACCTCATGATGACCAATAAATGATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	CATTTTAGTAACAAAACTGGAATAGCTTTCGATA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TCCTGATTCTATGACAACGTCAAAATATTTCTT
GTCGCATCCTATACGGATGCGTGGATTGAAAT	TTTCGTAATGTAAGTTTCATGTTTTCCAGACAAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GTCAATATGGGATCGATAAATTTGGAGCGAATTGATAA
GTCGCATCCTATACGGATGCGTGGATTGAAAT	GAATTTGTAAAAGTTCTACAAGATGAAGATATTAC
GTCGCATCCTATACGGATGCGTGGATTGAAAT	ACCACAATATTTTTTAGGCCATTCCAAATGCCCTTGAC
GTCGCATCATATACGGATACGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_079940645.1\|1987315_1988110_+\|phage-antirepressor-KilAC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377029
NZ_CP019655.1\|WP_079940640.1\|1985314_1985515_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019655.1\|WP_077584960.1\|1967289_1967889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940638.1\|1983230_1984454_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP019655.1\|WP_158672765.1\|1966039_1966738_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|131952
NZ_CP019655.1\|WP_079940635.1\|1971156_1971816_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019655.1\|WP_079940639.1\|1984479_1985178_-\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP019655.1\|WP_077995249.1\|1968408_1969629_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_077997486.1\|1967116_1967302_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940637.1\|1982539_1983166_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP019655.1\|WP_155121099.1\|1985833_1986247_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131728
NZ_CP019655.1\|WP_079940644.1\|1986654_1987293_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_149867812.1\|1969910_1970987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940634.1\|1964440_1964884_+\|cyanase	unknown	unknown	gnl\|CDD\|235079
NZ_CP019655.1\|WP_079940636.1\|1979854_1982302_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP019655.1\|WP_077997489.1\|1973655_1974003_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP019655.1\|WP_079940641.1\|1985580_1985808_+\|excisionase-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP019655.1\|WP_079940643.1\|1986226_1986535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_042118951.1\|1967917_1968112_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997681.1\|1972021_1972327_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226607

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_079940645.1\|1987315_1988110_+\|phage-antirepressor-KilAC-domain-containing-protein	gnl\|CDD\|377029	pfam03374, ANT, Phage antirepressor protein KilAC domain. This domain was called the KilAC domain by Iyer and colleagues.	4.28976e-38
NZ_CP019655.1\|WP_158672765.1\|1966039_1966738_+\|phosphotransferase	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	8.35809e-10
NZ_CP019655.1\|WP_079940640.1\|1985314_1985515_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.27924e-11
NZ_CP019655.1\|WP_079940635.1\|1971156_1971816_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.06175e-21
NZ_CP019655.1\|WP_079940639.1\|1984479_1985178_-\|LexA-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.4129e-11
NZ_CP019655.1\|WP_077995249.1\|1968408_1969629_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019655.1\|WP_079940637.1\|1982539_1983166_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.47767e-96
NZ_CP019655.1\|WP_155121099.1\|1985833_1986247_+\|hypothetical-protein	gnl\|CDD\|131728	TIGR02681, Uncharacterized_protein_HI_1412, phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein. [Mobile and extrachromosomal element functions, Prophage functions].	5.40274e-07
NZ_CP019655.1\|WP_079940636.1\|1979854_1982302_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.07838e-77
NZ_CP019655.1\|WP_077997489.1\|1973655_1974003_+\|hypothetical-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	2.98878e-41
NZ_CP019655.1\|WP_079940641.1\|1985580_1985808_+\|excisionase-family-DNA-binding-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	8.18832e-08
NZ_CP019655.1\|WP_079940638.1\|1983230_1984454_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.27231e-44
NZ_CP019655.1\|WP_079940634.1\|1964440_1964884_+\|cyanase	gnl\|CDD\|235079	PRK02866, PRK02866, cyanate hydratase; Validated.	1.50577e-84
NZ_CP019655.1\|WP_077997681.1\|1972021_1972327_-\|hypothetical-protein	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	3.32428e-27

>NZ_CP019655.1|WP_077997489.1|1973655_1974003_+|hypothetical-protein
MSNPGIGLIFLIPGLEETLRINGWACITKNSELMNRMQVRGKTPLLVLEFEVEECYVHCAKAFKRSQAWEPGSWLNLPKVSKMLAAHVNCEDFTEEVIAKGLDERTFGLWNFPFP
>NZ_CP019655.1|WP_077997681.1|1972021_1972327_-|hypothetical-protein
MNAVLNANAEAGLPAIDVSPNQGKLLYLLAKMKGCRNILAIGTLGGYSSIGMARALPEDGQLITLEFDPEHAKVAEKNIRNDGLDHKIEIITGPALETLPP
>NZ_CP019655.1|WP_079940635.1|1971156_1971816_+|ATP-binding-cassette-domain-containing-protein
MNSLNVYLDHFAFGKQPIFVKQEVSVAKGNIVGIIGENGIGKSTFVNLLAGNITSTLQINYHNKSLVPGYNPFVFFQPDDFTGLEYLTTLEVTQYFLLLYGEEFDQEKFDLLVQVANIQKEKVLKEYIKNLSKGTRQKVVFIIYMMANRDIIIFDEGLENIDADSLASILAYLKKWVKTENKLCLIATHSTTILEYADQFLHLIREEEGTTRIMPVSED
>NZ_CP019655.1|WP_149867812.1|1969910_1970987_+|hypothetical-protein
MFIKDALFELNGIILILINLVILLEIKVLAILLLLFISQAFKSTSGQTFLLVLYSMLYVFPIFYFHSTYLAVFTIFAGFFVVCFALYFCVYLIGARNRNMKGTRGRWFLLFADIQRLIRRLVETKISLSRFAFPPYILLYVFLFWVLDMFPSFFAQFSIGKDMLVSLSLILYVGIYFIYTKTSVLLLDDCFYFSATKIELYATNPVFSYFRKITVLLVFNVFSIFWGLCYLNLVLKMNGDFAKIGLMFFIHLFMLPIFVSANIFVDKNKAEVTQYPEDFKKYVSFIEAFFFFILFISVHLLVIMHYDPRTAVLITSHLFDINVYLLGTLVVISAVISIVKTLTHMGVVRKSIKRGFYE
>NZ_CP019655.1|WP_077995249.1|1968408_1969629_-|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019655.1|WP_042118951.1|1967917_1968112_+|hypothetical-protein
MFELIASGISAGNAAQVINAVFNGLSIVSALSLCAGIAGGAAWFLSNGIGYMIKWAGKKTIIDW
>NZ_CP019655.1|WP_077584960.1|1967289_1967889_+|hypothetical-protein
MIGLIIIFCSIFFYIVSAIPVIATYFVFGESFAIILKEKGLIAAISTYPHFLPETLSTMLLLSIAFVISAKMLKIVFKNESILKNKKKILKTYLVSNVLLIFAAFIEALKIGDRKLINEIYFVSIGSKLIFSTVAVLTLISATSWNFIFASVGAIILYIIYFFANKQNTISERTRKVIARGDECLRIYSYGSRGFMPCL
>NZ_CP019655.1|WP_077997486.1|1967116_1967302_+|hypothetical-protein
MKAYISVGHKAAIFLIGLSILVGFIYGFVFEDIDQIKTIGFDGLNVLETFFQIFSIILSLV
>NZ_CP019655.1|WP_158672765.1|1966039_1966738_+|phosphotransferase
MVKPFSRRKTGPKLTTREQITRLSSYIQKLKESGYPHLPNWLVTKSGQYWVSHNGRPYYMTDWVEGSGIQSEEDYENLGRALATLHTNCKDSLPSMSRYTYKQTKLFKLQDQLFRRQLLTIRRNKSKGKWFREHGGLCIELANKSWSILRKPETKQIMEEEINHPTLIHGDVTLPNIIIHPSRPFLIDWDLLRMGSTYYETAKTLLNTTNFDPQKYLCSNKGLRTNKRVDSG
>NZ_CP019655.1|WP_079940634.1|1964440_1964884_+|cyanase
MERELAGKIIVEAKRKLGLKWADIAKVIDRSEAWTASALLGQATLSNEEAEQVASLLELDQEVAECLTEVPYRGTTIQMPPTDPLLYRFYEMLLVYGPGMKEIIHEKFGDGIMSAIDFEMDIKRVPDPKGDRVLMMLNGKFLPYKKF
>NZ_CP019655.1|WP_079940636.1|1979854_1982302_+|CRISPR-associated-helicase/endonuclease-Cas3
MKSIAHIRESDKQVQTVEEHLLEVRHLAEKFGRKLKVEHVTGLAGMLHDMGKYTHQFTEYILAATSGDSTVPKPKRGSVDHSTAGGKLLYDLFHTSNRLGCKELLAEIVGNAIISHHSYLKDFLNRDLESAYLKRVRDTQLDEYELTKETFFHQVISEREFQDYADQAAAELEQFLSKEPTVSFEVKCLFLTKFVFSALIDADRTNTRLFEANKIEETVNVEELFHVYYTRLMSKIRAFKESDDANTPINLLRSEMSEQCDQFAMKPSGIYTLSIPTGGGKTLASLRYALKHALTFHKKRIIYVVPYTTIIEQNAAEVRKILNDEANILEHHSNVIDDNHDNDEDEDGLLTVQQKLKLAKDNWDAPIIFTTMVQFLNVFFAKGSRNIRRLHNLCESVLIFDEVQKIPTSCVSLFNQALNFLKTYGRSSIVLCTATQPALNFVEQKLDIQANAEMIARIDHVIEAFKRVEIIDKVSDETFDNAKLSEFVKTLVEEVGSVLIILNTKSAAKSLYKQLNGQVIDGQGTEIPLYHLSTSMCASHRNHILQEVKEHLSKQEKVICVSTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGKDKIRKVYIIDHAEENLDRLKEIKVGKQLTKKMLVDLKHNPSVYGGHLLSRMAMERYFQEYYTKFESDLNYFIPGLGKSMMELLFSGRYETDSYYQSYARNTNEKLLLCIANSYGTAAEHFRVIDDHTTSVIVPYGKGKEVIADLNGGGTVDDLTQVLRKAQQFTVNLFEHEIQQLDRSGGLDSCMDGKVLVLREGAYNEEFGIDLENDSPVEFLGF
>NZ_CP019655.1|WP_079940637.1|1982539_1983166_+|type-I-C-CRISPR-associated-protein-Cas5
MTRNSIEFEVYGNYALFTDPLTKMGGEKLSYQIPTYQALKGILESIYWKPTILFIVDEVRVMNPVRMESKGIRPIEYGGGNTLANYTYLRDVRYQCRAHFVFNPHRPDLAYDRNEHKHHNILKRSLHAGGRRDIFLGSRECQGYVEPCQFGEGKGFYDDYDGDIHFGTMVHGINYPDETGRHQMETRLWNPVMKNGIIKFIMEHIKNP
>NZ_CP019655.1|WP_079940638.1|1983230_1984454_-|site-specific-integrase
MKGHFYKPNCKCPGKKTRKCSCGATWSYIIDVGINPKSGKRKQKKKGGFKTKQEAQEAAALLVTELVQGTYVEEKNSTFEEYAKEWLLEYQSTGTVKISTIRLRQYCMKLLISYLAKLKLSNITTKQYQHVLLDLYNKGYSKNTIAGVHQTGKMIFQRATKLKIIKNNPTSHAVIPKKQTTVEELEAERDLPKYMEKEDLALFLRTAKEKGLDRDYAIFLTLAYTGMRIGELCALKWPDINFSEQTISITKTYYNPNNNIKNYTLLTPKTKSSKRVIIVDKIVLDELEQLQAEQKRIKMLFRKTYHDKNFAFAQQDEENPGFPTYQKSIALRMTRLLKLAGLNTKLTPHSLRHTHTSLLAEAGVSLEQIMQRLGHRSDETTKNIYLHVTKPKKKEASQKFAELMSSF
>NZ_CP019655.1|WP_079940639.1|1984479_1985178_-|LexA-family-transcriptional-regulator
MKLNKTVQYQRKVLADNIKKLLETKGKTQTDMARDLGIAETTVSSWVNCERYPRLDKIQLMADYFNVRRSELTEEKTDTCRELKIRNYPYFSTVSAGLPIEVEAISSFSTETIAVPDYIMGKWAGSDDVYIMRVNGDSMNKVIPHNSLIAVKKVDLYSLKNGDIVIFSYEQEYAVKRFYIDETNRRVIFRPDSTDRSFVDFTVPFEEVGKVRINGKVVVYMVEMNGIESDGF
>NZ_CP019655.1|WP_079940640.1|1985314_1985515_+|helix-turn-helix-transcriptional-regulator
MKKQWDLTIRAARVEKGFTQQALAEKLGVSKRTVVSWERGDVEIKPYVIYSLAYVFDMDADRIRVT
>NZ_CP019655.1|WP_079940641.1|1985580_1985808_+|excisionase-family-DNA-binding-protein
MKISKINELPDILTAQSIAEYLGISRRRVYELFQLKPECGGIPNFEVGKSKRVYKDDLTQWIENKIKEKSTRIAN
>NZ_CP019655.1|WP_155121099.1|1985833_1986247_+|hypothetical-protein
MNKITAAGYDPLIKREGNVFNKYGVPLVDSREMAELLSVDHSRLVEDIYNLNVSDDIYFANFTLDYVHEGRKFIWIFYMTDDGFFLLFERYKWAAKSAMALERLKSGQATINELRKEFGLKELDDEGANVILTIKGN
>NZ_CP019655.1|WP_079940643.1|1986226_1986535_-|hypothetical-protein
MIELASKVLAALDEIKNASITDPQKAMRTYNILLYGERNNVISSNDLLQTLNNQFSVDIDKEKFSRLLSVLSELNKITCEPLTITYNPDLPASDIYLITLYS
>NZ_CP019655.1|WP_079940644.1|1986654_1987293_+|hypothetical-protein
MGCDIHLFVEKKVNGAWEALKGINEPRIQDFHSMLQRCKKRGEGTSLWGEWIKKEQEGTYDFVDIHRNYRLYAALANVRNYYYNRVKPISEPRGLPSDVSTVVKEKADEWDEAHDHSYLTVKELSEFDWDQKICFEGFVGDEQYSEFLKNGAPTWWYRDESEWGGITLCRLIQWTESLKDCVDTFYTWSIPKLIELADGDLESVRIVFWFDN
>NZ_CP019655.1|WP_079940645.1|1987315_1988110_+|phage-antirepressor-KilAC-domain-containing-protein
MNQLQVFNFTGKEVRVIMKDGHPWWVAKDVCSVLDHSDVSMAVKRLDEDEKLTQTLFVSGQNRNVWFVNEPGLYSLILTSRKPESKKFKRWVTHEVLPAIRQTGIYSLSAAPSYMIDDPIKRAEQWIREYKEKQEAQTKALMLEQRVAEYEPKITYLDRILQSKGTVTITQIAKDYEMSGQALNQILHEERVQYKQNGQWLLYREHHDKGYTKSETIDIRRRNGDQDVTMNTRWTQKGRLFIHEILKRRGIVPVMDREKKGVIA

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Crispr_ID: NZ_CP019655_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_6

2046389-2047424

TypeI

Consensus_repeat	Method
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CRT

15 spacers

cas2,cas1,cas4,cas7,cas8c

The CRISPR arrays of NZ_CP019655_6

>merge|NZ_CP019655|6|2046389-2047424|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAATCCAAGTCTGGTAAACCAATGTTGACCTGCTGGAGTCGCATCCCATGTGGATGCGTGGATTGAAATGGACAACTGGACATATCAAAATGATTGTAGAATTGGTCGCATCCCATGTGGATGCGTGGATTGAAATGCGAAACACCCCACCGTTAATTTCACGCAATTTCCCGTCGCATCCCATGTGGATGCGTGGATTGAAATAGACGGTACGTTAATCGTACCAATGACAAGGAGGTCGCATCCCATGTGGATGCGTGGATTGAAATATTTTCCCATCATTATCCGTGATGGAGATTTTAAGCGTCGCATCCCATGTGGATGCGTGGATTGAAATACCCAAAATCATTTTTTCTGTGTCGGACAGCTCAGTCGCATCCCATGTGGATGCGTGGATTGAAATTTGTGTAAAAAACTGATTTCGAATGAGCGCCAAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCTCATAGATTAAATCTTCCATGCCAAACATTTTACGGTCGCATCCCATGTGGATGCGTGGATTGAAATCAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGACGTCGCATCCCATGTGGATGCGTGGATTGAAATCATGATGATGTCAAAACGCTCAACGATGTCGCCGTGTCGCATCCCATGTGGATGCGTGGATTGAAATTTTCGCATCGGTCACCCTGCGAAAAAATACATAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAATCAATTCAGATTTAGAGTGAAATAGGTCCTCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATAAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAAGTCGCATCCCATGTGGATGCGTGGATTGAAATCGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGAGTCGCATCCCATGTGGATGCGTGGATTGAAATTAAAAAACGAGATGCCAACGGGTCGCCCGGATGTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019655|6|6|2046389-2047424|PILER-CR
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019655|6|6|2046389-2047424|CRISPRCasFinder
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

>NZ_CP019655|6|4|2046389-2047424|CRT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CCAAGTCTGGTAAACCAATGTTGACCTGCTGGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GGACAACTGGACATATCAAAATGATTGTAGAATTG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	GCGAAACACCCCACCGTTAATTTCACGCAATTTCCC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AGACGGTACGTTAATCGTACCAATGACAAGGAG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ATTTTCCCATCATTATCCGTGATGGAGATTTTAAGC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	ACCCAAAATCATTTTTTCTGTGTCGGACAGCTCA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTGTGTAAAAAACTGATTTCGAATGAGCGCCAAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CTCATAGATTAAATCTTCCATGCCAAACATTTTACG
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CAGTCCCGCAACATGAATGGGACTTGTGGGCTCTTGAC
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CATGATGATGTCAAAACGCTCAACGATGTCGCCGT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TTTCGCATCGGTCACCCTGCGAAAAAATACATAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AATCAATTCAGATTTAGAGTGAAATAGGTCCTCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	AAAAACTCTCTCACCTAATGCATTTGCTATTGCTAGCAA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	CGGAAGGGAAGACCCTACTGAAAGCAAGGAAAGA
GTCGCATCCCATGTGGATGCGTGGATTGAAAT	TAAAAAACGAGATGCCAACGGGTCGCCCGGAT
GTCGCATCCCATGTGGATGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_077995238.1\|2041442_2043347_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP019655.1\|WP_077995240.1\|2044211_2044871_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP019655.1\|WP_077995242.1\|2045908_2046199_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019655.1\|WP_077997492.1\|2048528_2048657_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995244.1\|2048087_2048492_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP019655.1\|WP_077995237.1\|2039961_2040588_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940661.1\|2049026_2050079_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_149867656.1\|2064130_2064334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_149867654.1\|2047778_2048084_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP019655.1\|WP_104932684.1\|2053005_2054493_+\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP019655.1\|WP_155121106.1\|2038605_2038974_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995249.1\|2051645_2052866_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_077995247.1\|2050260_2050743_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995248.1\|2051354_2051582_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372570
NZ_CP019655.1\|WP_077995241.1\|2044867_2045899_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP019655.1\|WP_077995239.1\|2043361_2044222_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP019655.1\|WP_077995236.1\|2038976_2039327_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940664.1\|2061393_2062137_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP019655.1\|WP_040931863.1\|2039371_2039797_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940660.1\|2040660_2041047_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_077995238.1\|2041442_2043347_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	7.20886e-177
NZ_CP019655.1\|WP_077995240.1\|2044211_2044871_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.23749e-26
NZ_CP019655.1\|WP_077995249.1\|2051645_2052866_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019655.1\|WP_077995248.1\|2051354_2051582_+\|IS3-family-transposase	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	1.79254e-08
NZ_CP019655.1\|WP_077995244.1\|2048087_2048492_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.61715e-19
NZ_CP019655.1\|WP_077995239.1\|2043361_2044222_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.96467e-133
NZ_CP019655.1\|WP_079940664.1\|2061393_2062137_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	6.22301e-41
NZ_CP019655.1\|WP_077995242.1\|2045908_2046199_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.10591e-31
NZ_CP019655.1\|WP_149867654.1\|2047778_2048084_+\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	2.15324e-09
NZ_CP019655.1\|WP_104932684.1\|2053005_2054493_+\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.48642e-32
NZ_CP019655.1\|WP_077995241.1\|2044867_2045899_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0

>NZ_CP019655.1|WP_077995242.1|2045908_2046199_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVCTTNSDGQRRLRMVSKTCQNYGQRVQNSVFECNVDAAQFASLKIQLIDIIDPEKDSLRFYQLGNNYKNKVEHIGVKESIDLEKPLIF
>NZ_CP019655.1|WP_077995241.1|2044867_2045899_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLLNTLYITQPDVYLSLDGDNILLMKEQEKLGRLPLHNLESIVSFGYTGASPALMGYCADRNISITFLTMSGRFLARVIGQSKGNVVLRKKQYLVSENEGLSAKVARNFIVGKIFNHKWMIERMTRDYPMRIDVDQFKHISRQLSSILLEVRSCEDLERLRGLEGQAAVSYNKVMGQMILQQTDDFYFHSRSRRPPLDNVNAMLSLAYTLLANDMAAALEAVGLDAYVGFLHRDRPGRASMALDVMEELRGVYADKFVLTLINKKMVNKDDFFKKENGAVLMTDDARKKFLDAWQKKKQEKIIHPYLGEKISWGLVPHAQALLLARYLRNDLDEYPPFLWK
>NZ_CP019655.1|WP_077995240.1|2044211_2044871_+|CRISPR-associated-protein-Cas4
MLLNDEDNYLMLSGIQHFQFCKRQWALIHIEQQWEENVRTIEGQHLHRNADNPFTREKRGNKLVIRSMSVRSHELKLTGICDVVEFIKDPRGVEISGAEGKYLAYPVEYKRGKPKTDESDLLQLAAQAICLEEMLLCEVQTGYIFYKEIMHRVEVQLTDDIKQKVRLVAAEMQEYYTRRYTPKVKTGSFCKSCSLLSICLPALMNKRSVKSYIEGKIQE
>NZ_CP019655.1|WP_077995239.1|2043361_2044222_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATLDHKIDFAVIFSVTKANPNGDPLNGNRPRQNYDGHGEISDVAIKRKIRNRLQDIGESIFVQSNDRSTDSFKSLRERAEANEALAKIIKAKDGSNEEFARLACEEWIDVRSFGQVFAFKGSGDKGVSVGVRGPVSIHTATSVDPIDITSMQITKSVNSEPGKAKGSDTMGMKHRVDFGVYVFYGSINTQLAEKTGFTNEDAEKIKQALITLFENDASSARPEGSMEVLKVYWWEHQSKLGQYSSAKVHRLLSVKANKEEPRSIEDYTISLNELDRLKVEIIDAP
>NZ_CP019655.1|WP_077995238.1|2041442_2043347_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNLDRVGVAEKKNKDQEFTLLPISHTTQTAHIEVTVTEEGEFHSASIIDKSDASTLIPCTEDSSSRSGSKVAPYPLHDKLSYVAGDFKAYGGQVKKEDPFIEYIKQLGDWAASPYGHAKVKSIFNYLKKGQLIGDLVKHRILAVDENNLLIGKWHDKYSSLYGEKPKIFSVLSGGQESAFVRFNVSNSLKDVWKDQEMYESFIGFYNHKLGDEKLCYVTGNMLPSTEKHANKIRNAADKAKLISANDSSGFTYRGRFHDSKEVASISYDVSQKAHNALKWLIHRQGKIIDQRVFLVWANDAPVLPGPEEDAFSLGFGSLVKVEKKSFTNKEFANEVAKALDGYKNNLASSKSNVNLLILDSATTGRMAVLYYRNMDKELYFDRLTKWHTSCVWLHRYRKDQNGDYVQFYGAPATKDIAYAAYGPKANDKVVKGLMERMLPCIVDERKIPSDIIKSAFHRASNPVSMEKWEWEKTLSITCALINKEEGYEVALDKQIDDRSYLFGRMLAVADVLERRALGSEETRATNAIRYMNSFSQHPERTWRVIQASLQPYQARLGAKGYYLSSLIDEIASKLKCEDFNNKPLSGKYLLGFYSQRHELYQKKEKDTESNVSPDENSEHSN
>NZ_CP019655.1|WP_079940660.1|2040660_2041047_-|hypothetical-protein
MPAATNDELTLIKKYLVLPLVVSVFERDAKTLREVLKTPDPYVERINRGIEYINDDLTKVRKYFRANDIKVYDVEMSASDVSCGYTCRGYTGSMRLLMSHLRSEVEVEMRKYLGEDIRELRKGPSNIV
>NZ_CP019655.1|WP_077995237.1|2039961_2040588_-|hypothetical-protein
MKEVIKVNRFTKKQAGIVGFALLFIVIGLVFFYIGRSSASHELDGKALTIANVQKETEEANAKLKEASDAYKEIEDKFKGAKVVIDIANTRKSDADRYQKEAEKYEKLAGEKKAELDKIESAIKEKKEAPIVLPAGNLTGGKDIPAGRYKVTKAGSRGSNFIINTASGDLKVSTIIHGGDHGVSEYIATIDSGDLLECHASFKFTPVE
>NZ_CP019655.1|WP_040931863.1|2039371_2039797_-|hypothetical-protein
MNIKEMYDLVKKIYAENVRTPDNWDNGFEFIGLRFEDKEREIGEICECSRHNSDREDEREFPEYGTEEYWEMEELNGTSAWDMAHKNTYEYSSWDAEQEDCRRCFLTEHCYVIAGNNVRNHSDADYGEIVIEDAVVIAKIF
>NZ_CP019655.1|WP_077995236.1|2038976_2039327_-|hypothetical-protein
MARKQIWMNPPLEKLAEKCGKANGREGKFSARLGDVVERFDILMKLTPVPELTDVEKMILGEVVCGSALSPVTVKYMPESIMDAATGTEEERMTLRDKVITWSAAERIAAIESLGV
>NZ_CP019655.1|WP_155121106.1|2038605_2038974_-|hypothetical-protein
MALLTRTCRQCQASFQGGPRAYYCPTCRAERTRKTYAEYKRRKRQGKARALGSTDTCERCGKSYVVNAGLQRFCPDCQPIHAAEHDRRTSLSYYNANKDTINPARNQKRREWRRRKKAKNAP
>NZ_CP019655.1|WP_149867654.1|2047778_2048084_+|IS3-family-transposase
MKVPRSTYYYMKNKKVMKKTVSEGRPAPGYSYQANGTKVPDEHQEWLMELISSDGFAYGYRKLTVCLRREYQLQINKKKVYRLCKNLDILRPQRQKPVVYP
>NZ_CP019655.1|WP_077995244.1|2048087_2048492_+|DDE-type-integrase/transposase/recombinase
MARNRTVTDSNQLFETYIKYGFITGEERFFFIQSCIDVYDRSIVAFHIGLSCEAKDVASTLQSALMKRQLFVALEKPVIRSDNGPQFISHAFQQACTSFGVEHERIPPKTPNMNAHIESFHRLLQDECLARYEF
>NZ_CP019655.1|WP_077997492.1|2048528_2048657_+|hypothetical-protein
MRYYNERRIHSSIHDLSPYEFYDKNQKQLISIIKKDAHHQKR
>NZ_CP019655.1|WP_079940661.1|2049026_2050079_-|hypothetical-protein
MKKKKKKYGLMLAILATAIVITCFIMVKDGAGKSGLQITKTGEVPGDIIYTYGHPLNSPSEVVWIKDGHYQHHTILKGAIGIGYIQADKKGNLWTPSTRNNKLYKLTPDYKVETSTTPGQTQKFKIIEGARISSHSSGDRNYHLLNYVSEAKSFQMKLEGFLREFTKEGDKLYIFADLIAKEKSVLYVLDIPSEKVINTIPLPEGVADDMVVYQDKVVLATKTSLTVVDRSDWKVSTVKLSYPDVRPVSLYNRNGHLYVALRSDVDLSGLKLIKMDSNFKEISKVDLGIVHSGGDQFKDDKYYVYSGEGDPEKKFSGELSVYQLDTWEKIGSLILPIGPKKFNVSGFTVL
>NZ_CP019655.1|WP_077995247.1|2050260_2050743_-|hypothetical-protein
MNFLPKEELERADRVFKEFSESWNNDIPEENLKQKGFSDEELKKMKRTKRSVGGSTMTREARRDILITKDQKLIWRHGHAGVVYNDSYVVEALPAPDNVDYQYIGKWKWPDYPGAYETVKGMYVVDKNGNKAEQKYYTWAGSNAGYHVGKPYNSTFVNMY
>NZ_CP019655.1|WP_077995248.1|2051354_2051582_+|IS3-family-transposase
MLPKTGYEGRSQISMVSSLMKRLIKNGPMESFWGTLKCEKYYLHSYSTYEELKKDIDNYIYFYNNERLQAKLKSL
>NZ_CP019655.1|WP_077995249.1|2051645_2052866_+|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019655.1|WP_104932684.1|2053005_2054493_+|IS1182-family-transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDLVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLDFPLGGNTFKKVYT
>NZ_CP019655.1|WP_079940664.1|2061393_2062137_-|MerR-family-transcriptional-regulator
MLYTVKEVAALSQVTVKTLHHYHKIELLLPYEISEAGYRLYGVKELERLQQILFYRELDFPLEKIKQLLEGESRLGILSDQKDLLLARKQRLDRLIQTLDQSIECVVKGEVMDQSSMFKGFESEQKWKNALAEHKEYLKETYGLDILEDRPIDVKDMNEKASRADRFMEEMAKALKAGMKFDDETVRGLIREHINFLNQNVHATSAEDFALQARFFLDDDFHRNIMESRQTGLAYYLFTAAESYAVK
>NZ_CP019655.1|WP_149867656.1|2064130_2064334_+|hypothetical-protein
MSQVGVSAVMALAFLKTPYYGWGRIAETILGCLVAILVNVVIAPSNNLPKAARSIRKLSEISSNQIH

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Crispr_ID: NZ_CP019655_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_7

2060380-2061292

TypeI

I-C

Consensus_repeat	Method
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CRT

13 spacers

cas2,cas1

The CRISPR arrays of NZ_CP019655_7

>merge|NZ_CP019655|7|2060380-2061292|PILER-CR,CRISPRCasFinder,CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAATAAGATCTTTTTGTTTTAATTCTTTTTGTATATCTTGTCGCATCCTACGCGGATGCGTGGATTGAAATAAAAAAGTCATACCAATCAATACCTTGTGCAACAAGGTCGCATCCTACGCGGATGCGTGGATTGAAATTGGAATTCTATTAGCGAAATCCAGTCAACGAGCATTGTCGCATCCTACGCGGATGCGTGGATTGAAATAACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAAGTCGCATCCTACGCGGATGCGTGGATTGAAATTCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGAGTCGCATCCTACGCGGATGCGTGGATTGAAATTATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCCGTCGCATCCTACGCGGATGCGTGGATTGAAATGTCATAAAGGAGCTGATCTAATTGGATGTTTTCGGTCGCATCCTACGCGGATGCGTGGATTGAAATACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTAGTCGCATCCTACGCGGATGCGTGGATTGAAATTTTGATTTTTGTTGAATTGATCATTTTTTATCCCTCGTCGCATCCTACGCGGATGCGTGGATTGAAATGAAAAACAAATACAAAAATAATTACACCAAGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATAGATTTCGGGACCAGCGATGACAAAACGTATGAAGTCGCATCCTACGCGGATGCGTGGATTGAAATCCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCACGTCGCATCCTACGCGGATGCGTGGATTGATAGACCCGATGCCAGAGTACACTGCCCTCCCTGAGTTACATCCTACGCGAATAGTTGAATTGCAAA

>NZ_CP019655|7|7|2060380-2061160|PILER-CR
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT

>NZ_CP019655|7|7|2060380-2061292|CRISPRCasFinder
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG	ACCCGATGCCAGAGTACACTGCCCTCCCTGA
GTTACATCCTACGCGAATAGTTGAATTGCAAA

>NZ_CP019655|7|5|2060380-2061229|CRT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAGATCTTTTTGTTTTAATTCTTTTTGTATATCTT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AAAAAAGTCATACCAATCAATACCTTGTGCAACAAG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TGGAATTCTATTAGCGAAATCCAGTCAACGAGCATT
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AACTCTACTGCATTGTCCGCGTTAATCTTAATCTCAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TCATACCTTTGGCAATCATGTATTCACGGAAGCTTATAGA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TATTATTTGCGTCAAAGCAGCATGTAACTCTTCGGCCC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GTCATAAAGGAGCTGATCTAATTGGATGTTTTCG
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	ACCAGCTTCCGTATCCCAATCACAGCCATTATAGGCTA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	TTTGATTTTTGTTGAATTGATCATTTTTTATCCCTC
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	GAAAAACAAATACAAAAATAATTACACCAAGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	AGATTTCGGGACCAGCGATGACAAAACGTATGAA
GTCGCATCCTACGCGGATGCGTGGATTGAAAT	CCTTGAAACTCCCAAATTGGTTAATTAAAAAGATCAC
GTCGCATCCTACGCGGATGCGTGGATTGATAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_077995247.1\|2050260_2050743_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_023484252.1\|2068784_2069276_+\|DUF1641-domain-containing-protein	unknown	unknown	gnl\|CDD\|225283
NZ_CP019655.1\|WP_077997492.1\|2048528_2048657_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995244.1\|2048087_2048492_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP019655.1\|WP_079940666.1\|2065833_2068782_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|225918
NZ_CP019655.1\|WP_079940661.1\|2049026_2050079_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940664.1\|2061393_2062137_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP019655.1\|WP_024094005.1\|2071343_2072297_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_CP019655.1\|WP_149867654.1\|2047778_2048084_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP019655.1\|WP_104932684.1\|2053005_2054493_+\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP019655.1\|WP_077995241.1\|2044867_2045899_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP019655.1\|WP_023484248.1\|2072290_2073049_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226963
NZ_CP019655.1\|WP_077995249.1\|2051645_2052866_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_077995248.1\|2051354_2051582_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372570
NZ_CP019655.1\|WP_079940665.1\|2065060_2065234_-\|DUF3951-domain-containing-protein	unknown	unknown	gnl\|CDD\|315734
NZ_CP019655.1\|WP_155116373.1\|2064490_2064643_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_079940830.1\|2069292_2070087_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP019655.1\|WP_149867656.1\|2064130_2064334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995242.1\|2045908_2046199_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019655.1\|WP_024094004.1\|2070400_2071354_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226965

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_077995244.1\|2048087_2048492_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.61715e-19
NZ_CP019655.1\|WP_079940666.1\|2065833_2068782_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|225918	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only].	0
NZ_CP019655.1\|WP_077995241.1\|2044867_2045899_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP019655.1\|WP_079940664.1\|2061393_2062137_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	6.22301e-41
NZ_CP019655.1\|WP_024094005.1\|2071343_2072297_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.35788e-128
NZ_CP019655.1\|WP_149867654.1\|2047778_2048084_+\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	2.15324e-09
NZ_CP019655.1\|WP_104932684.1\|2053005_2054493_+\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.48642e-32
NZ_CP019655.1\|WP_023484252.1\|2068784_2069276_+\|DUF1641-domain-containing-protein	gnl\|CDD\|225283	COG2427, COG2427, Uncharacterized conserved protein [Function unknown].	9.5598e-20
NZ_CP019655.1\|WP_023484248.1\|2072290_2073049_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	2.38591e-158
NZ_CP019655.1\|WP_077995249.1\|2051645_2052866_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.19781e-125
NZ_CP019655.1\|WP_077995248.1\|2051354_2051582_+\|IS3-family-transposase	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	1.79254e-08
NZ_CP019655.1\|WP_079940665.1\|2065060_2065234_-\|DUF3951-domain-containing-protein	gnl\|CDD\|315734	pfam13131, DUF3951, Protein of unknown function (DUF3951). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 56 and 71 amino acids in length. There is a conserved YTP sequence motif.	1.0256e-08
NZ_CP019655.1\|WP_079940830.1\|2069292_2070087_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	3.30825e-115
NZ_CP019655.1\|WP_024094004.1\|2070400_2071354_+\|ABC-transporter-permease	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.32823e-148
NZ_CP019655.1\|WP_077995242.1\|2045908_2046199_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.10591e-31

>NZ_CP019655.1|WP_104932684.1|2053005_2054493_+|IS1182-family-transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDLVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLDFPLGGNTFKKVYT
>NZ_CP019655.1|WP_077995249.1|2051645_2052866_+|IS256-family-transposase
MGLWTKQQLREFIKENNLVTAQDAQNALKELFAETIQEMLEAELDTHLGYEKHEVKAKKTPNSRNGRSHKTVVSEYGEQQIAVPRDRMGEFEPLVVKKHQSNVTGIEDQIVALYAKGVSTREIQDHLQNLYGIEVSPTLISNVTNKIVPLIKEWQNRPLQGVYAVVFLDAIHFKVKQDGAIVSKAAYMVIGIDLDGNKDVLGMWIGENESSKFWIGVLNDLKNRGVQDILITCVDNLNGFSEAITASYPKTEIQKCIIHQIRNSTRYVSYKDLKKVTADLKPIYKASTEEAALLELDRFEEVWGTKYPLIIRSWRNNWAELATFFKYPPEIRRLIYTTNMIESYHRQLRKVTKGKSIFPTDEALLKMLYLATMDVTRKWTGRVQNWGQMLLQFSVFFPDRVGHHLR
>NZ_CP019655.1|WP_077995248.1|2051354_2051582_+|IS3-family-transposase
MLPKTGYEGRSQISMVSSLMKRLIKNGPMESFWGTLKCEKYYLHSYSTYEELKKDIDNYIYFYNNERLQAKLKSL
>NZ_CP019655.1|WP_077995247.1|2050260_2050743_-|hypothetical-protein
MNFLPKEELERADRVFKEFSESWNNDIPEENLKQKGFSDEELKKMKRTKRSVGGSTMTREARRDILITKDQKLIWRHGHAGVVYNDSYVVEALPAPDNVDYQYIGKWKWPDYPGAYETVKGMYVVDKNGNKAEQKYYTWAGSNAGYHVGKPYNSTFVNMY
>NZ_CP019655.1|WP_079940661.1|2049026_2050079_-|hypothetical-protein
MKKKKKKYGLMLAILATAIVITCFIMVKDGAGKSGLQITKTGEVPGDIIYTYGHPLNSPSEVVWIKDGHYQHHTILKGAIGIGYIQADKKGNLWTPSTRNNKLYKLTPDYKVETSTTPGQTQKFKIIEGARISSHSSGDRNYHLLNYVSEAKSFQMKLEGFLREFTKEGDKLYIFADLIAKEKSVLYVLDIPSEKVINTIPLPEGVADDMVVYQDKVVLATKTSLTVVDRSDWKVSTVKLSYPDVRPVSLYNRNGHLYVALRSDVDLSGLKLIKMDSNFKEISKVDLGIVHSGGDQFKDDKYYVYSGEGDPEKKFSGELSVYQLDTWEKIGSLILPIGPKKFNVSGFTVL
>NZ_CP019655.1|WP_077997492.1|2048528_2048657_+|hypothetical-protein
MRYYNERRIHSSIHDLSPYEFYDKNQKQLISIIKKDAHHQKR
>NZ_CP019655.1|WP_077995244.1|2048087_2048492_+|DDE-type-integrase/transposase/recombinase
MARNRTVTDSNQLFETYIKYGFITGEERFFFIQSCIDVYDRSIVAFHIGLSCEAKDVASTLQSALMKRQLFVALEKPVIRSDNGPQFISHAFQQACTSFGVEHERIPPKTPNMNAHIESFHRLLQDECLARYEF
>NZ_CP019655.1|WP_149867654.1|2047778_2048084_+|IS3-family-transposase
MKVPRSTYYYMKNKKVMKKTVSEGRPAPGYSYQANGTKVPDEHQEWLMELISSDGFAYGYRKLTVCLRREYQLQINKKKVYRLCKNLDILRPQRQKPVVYP
>NZ_CP019655.1|WP_077995242.1|2045908_2046199_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVCTTNSDGQRRLRMVSKTCQNYGQRVQNSVFECNVDAAQFASLKIQLIDIIDPEKDSLRFYQLGNNYKNKVEHIGVKESIDLEKPLIF
>NZ_CP019655.1|WP_077995241.1|2044867_2045899_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLLNTLYITQPDVYLSLDGDNILLMKEQEKLGRLPLHNLESIVSFGYTGASPALMGYCADRNISITFLTMSGRFLARVIGQSKGNVVLRKKQYLVSENEGLSAKVARNFIVGKIFNHKWMIERMTRDYPMRIDVDQFKHISRQLSSILLEVRSCEDLERLRGLEGQAAVSYNKVMGQMILQQTDDFYFHSRSRRPPLDNVNAMLSLAYTLLANDMAAALEAVGLDAYVGFLHRDRPGRASMALDVMEELRGVYADKFVLTLINKKMVNKDDFFKKENGAVLMTDDARKKFLDAWQKKKQEKIIHPYLGEKISWGLVPHAQALLLARYLRNDLDEYPPFLWK
>NZ_CP019655.1|WP_079940664.1|2061393_2062137_-|MerR-family-transcriptional-regulator
MLYTVKEVAALSQVTVKTLHHYHKIELLLPYEISEAGYRLYGVKELERLQQILFYRELDFPLEKIKQLLEGESRLGILSDQKDLLLARKQRLDRLIQTLDQSIECVVKGEVMDQSSMFKGFESEQKWKNALAEHKEYLKETYGLDILEDRPIDVKDMNEKASRADRFMEEMAKALKAGMKFDDETVRGLIREHINFLNQNVHATSAEDFALQARFFLDDDFHRNIMESRQTGLAYYLFTAAESYAVK
>NZ_CP019655.1|WP_149867656.1|2064130_2064334_+|hypothetical-protein
MSQVGVSAVMALAFLKTPYYGWGRIAETILGCLVAILVNVVIAPSNNLPKAARSIRKLSEISSNQIH
>NZ_CP019655.1|WP_155116373.1|2064490_2064643_+|hypothetical-protein
MEPLNDLLGQLAKEPNIELRFTPNLPPLKERIISSNLDFSIIRFRHAKPL
>NZ_CP019655.1|WP_079940665.1|2065060_2065234_-|DUF3951-domain-containing-protein
MIVLIAVITFKIIKNKELPSNSYTPFDYITGQSNVEFHEEKEEKEEDMAKGDNKGKT
>NZ_CP019655.1|WP_079940666.1|2065833_2068782_+|formate-dehydrogenase-subunit-alpha
METVKFQLNGEEHETAEGTRILDFLLELGKDHPHICYSPITGPIQSCDTCMCEADGKLVRACSTTLKPGMRIRTSSEKAQIAQKEAMDRILENHMLYCTVCDNNNGNCKVHNTTEMLGIEHQSRPFRPKGYKKDMSNPFYRYDPDQCILCGRCVEACQDLQVNETLSIDWEREIPRVIWDDDKAINESSCVSCGHCVTVCPCNALMEKTMLGEAGFLTGMSEGLMNPMIDLVKAVEPGYSGIFAVSEMEAALRETRTKKTKTVCTFCGVGCSFEVWTKDRVILKIEPNEQAPVNSISTCVKGKFGWDFVNSDQRLTAPLIRRGDQFVPAGWDETIDYIAERLGRIKEEYGGNALSFVASSKTTNEDTYLMQKLARQVFETNNVDNCSRYCQSPASDGLQNTVGYGGDSGTIRDIEQAGLVIIVGANSAEAHPVLATRVKRAHKLRGQKLIVADLRKHEMAERADLFIRPKQGTDFVWLTALAKYILDQGWHDEAFLRERVNNREEYEQMIEKYTISYAEKITGIPGEQLIQTAKMICEASGTCILWGMGVTQNVGGSHTSAAISNLLLVTGNYGRTGTGAYPLRGHNNVQGACDMGALPQWLPGYQKLADDEVRQKFEKAYGVRISPEPGLTNVGMVEAIHEGRLKGMYLMGEDMVWVDSNSNNVQEALAKLDFFVVQDVFLTKTAQFADVVLPACPSLEKDGTFTNTERRIQRLYRALEPLGDSKPDWWIIQQLANRMGANWAYKHPGDVMDEIASLVPTFAGVRYSRLEHWNSQHWPVREDGTDEPLLYTQRFNFPDGKARLSTAEYIPPVGYPSDFDLIVNNGRLLEHFHETNLTGKSKGINYKLPSVFVEISSELAGKRGLEDGSLVRLVSPYGSIKLHVLVTDRVEGNHIYVPMHSHSHENAINILSGNAVDMKTSTPAYKQTRARMEIIQKEGISPLPRHNHRFARRRPQTGVQVERKWERQDYEPIADVNVNGGQ
>NZ_CP019655.1|WP_023484252.1|2068784_2069276_+|DUF1641-domain-containing-protein
MAKSITTITEPVLSEKEANEKAWAEVLEELSRNSEGLRSYIRLLQELHESGIMDTMKAALQSKEELAKVIVKEMNKPNNTNTINNLMAMAGTLSMLDSDVVKKMASSVSTGFHKAREENQTEEKIGLFDLMKALKDPDINRAVRFGLNFLKGMGQSLGEKGEK
>NZ_CP019655.1|WP_079940830.1|2069292_2070087_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MGLPVQITRRILRVQGNEAEKTEDQIVTEYPLTLVLNDREFATLVCTPEHLEELVAGFLCSEGAISGFEDIDDLAIDENTGFAYIKAAQTRPFYEQFHSKRVISSCCGKSRQSFYFHNDRHTVKKIPESGLSISVEECFRLMEQMQEAARTFRLTGGVHNAALCDRKGVLLFRMDIGRHNALDKIYGHCLMHQIPLHDKIMVFSGRLSSEVLLKTARIGCGIVLSKSAPTQLALDLAEELNITTVGFLRHHTFNIYTGLKRIEL
>NZ_CP019655.1|WP_024094004.1|2070400_2071354_+|ABC-transporter-permease
MKLRYLFIALVILSFASVFIGVKEVSPMDMLHLGEEQVQVILISRIPRLVSIIIAGVSMSISGLIMQQISRNKFVSPTTAGTMDFARLGILVSIMLFTTASPLVKMLVAFIFALLGTLLFMKILKRIRFKDTIFIPLVGIMFGNVVSSITTFFAYKYDLIQNINAWLQGDFSMIIKGRYELLYLSIPIVIIAFLYANKFTVAGMGEDFSKNLGVNYNRVVNVGLVIVALVSAVVILTVGTIPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLFCDILGRIIIFPYEVSISVTVGVIGSIIFLYLLFRRNAYAS
>NZ_CP019655.1|WP_024094005.1|2071343_2072297_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MHHRRMLGILAGLALILIAVFMLIKVNSNNWDYVIPKRSFKIAAIVLTGSAIAYSSLVFQTITNNRILTPSIMGLDSLYMLIQTFVVFVFGSSHLAMANKNMNFLISVGLMILFAAVLFKILFRRDGNNIYFLLLVGIIFGGLFQSFSSFMQMLIDPNEFQIVQDKMFASFNNINTDILLIAVIGMFLVAAYVFRYTKMLDVLSLGREHAVNLGIPYDKIVKRMLIIVAILVSISTALVGPITFLGLLVVNVTREFLKTYQHKFLIPGSVLISIIALVGGQLIVERVFTFNTTLSVIVNFVGGIYFIYLLLKENKAW
>NZ_CP019655.1|WP_023484248.1|2072290_2073049_+|ABC-transporter-ATP-binding-protein
MVEVRNVSKQYGNKKVVDQISLEVPKGKITSFIGPNGAGKSTLLSMISRLINKDSGEILIAGKEISEWKSNELAKTMSILKQSNHINIRLTVRELVSFGRFPYSQGNLTGEDENYVDEAIRYMELEEFQNRYLDQLSGGQSQRAFIAMVIAQNTEYIFLDEPLNNLDMKHSVQIMKVLRRLVDELGKTVIIVIHDINFASCYSDYIVALKDGRVIKEGPTTEIMDPRTLKEIYDMDIRIEEIEGKQIGIYFT

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Crispr_ID: NZ_CP019655_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_8

3453364-3453465

Orphan

Consensus_repeat	Method
TGTTACTTTGCTGTTACCCCAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019655_8

>merge|NZ_CP019655|8|3453364-3453465|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTGTTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGGTGTTACTTTGCTGTTACCCCGAAA

>NZ_CP019655|8|8|3453364-3453465|CRISPRCasFinder
TGTTACTTTGCTGTTACTTTGCTG	TTACCCCAAACATTTTTGATAGGCTCTAATCCCCTGATATATAAGGGTTTAAGG
TGTTACTTTGCTGTTACCCCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_036654551.1\|3453780_3453984_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP019655.1\|WP_024094814.1\|3455127_3456438_-\|permease	unknown	unknown	gnl\|CDD\|183124
NZ_CP019655.1\|WP_077995841.1\|3457489_3458191_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl\|CDD\|99814
NZ_CP019655.1\|WP_079940414.1\|3447399_3448521_-\|Clp-protease-ClpP	unknown	unknown	gnl\|CDD\|132927
NZ_CP019655.1\|WP_077995835.1\|3452120_3452633_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226673
NZ_CP019655.1\|WP_077997539.1\|3461061_3461838_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|223539
NZ_CP019655.1\|WP_077995842.1\|3459217_3460054_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133029
NZ_CP019655.1\|WP_104932757.1\|3460040_3461057_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_CP019655.1\|WP_155121053.1\|3445839_3445989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995826.1\|3444983_3445535_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284235
NZ_CP019655.1\|WP_077995834.1\|3450274_3452137_-\|phage-terminase-large-subunit-family-protein	unknown	unknown	gnl\|CDD\|368649
NZ_CP019655.1\|WP_077995837.1\|3454453_3454657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997537.1\|3458606_3459134_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237245
NZ_CP019655.1\|WP_077995836.1\|3454014_3454425_+\|pilus-assembly-protein-HicB	unknown	unknown	gnl\|CDD\|374224
NZ_CP019655.1\|WP_077995829.1\|3447046_3447403_-\|head-decoration-protein	unknown	unknown	gnl\|CDD\|376964
NZ_CP019655.1\|WP_077995828.1\|3446002_3447031_-\|major-capsid-protein	unknown	unknown	gnl\|CDD\|377147
NZ_CP019655.1\|WP_077995832.1\|3448480_3450040_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377468
NZ_CP019655.1\|WP_036654839.1\|3456576_3457509_-\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235982
NZ_CP019655.1\|WP_077995827.1\|3445531_3445843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077995833.1\|3450036_3450258_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_036654551.1\|3453780_3453984_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.8138e-13
NZ_CP019655.1\|WP_024094814.1\|3455127_3456438_-\|permease	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	3.23666e-66
NZ_CP019655.1\|WP_077995841.1\|3457489_3458191_-\|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl\|CDD\|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	9.35291e-87
NZ_CP019655.1\|WP_079940414.1\|3447399_3448521_-\|Clp-protease-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	7.8199e-78
NZ_CP019655.1\|WP_077995835.1\|3452120_3452633_-\|hypothetical-protein	gnl\|CDD\|226673	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair].	7.1697e-06
NZ_CP019655.1\|WP_077997539.1\|3461061_3461838_-\|glycosyltransferase	gnl\|CDD\|223539	COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].	8.10844e-17
NZ_CP019655.1\|WP_077995842.1\|3459217_3460054_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.8215e-52
NZ_CP019655.1\|WP_104932757.1\|3460040_3461057_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	9.10323e-11
NZ_CP019655.1\|WP_077995826.1\|3444983_3445535_-\|hypothetical-protein	gnl\|CDD\|284235	pfam06763, Minor_tail_Z, Prophage minor tail protein Z (GPZ). This family consists of several prophage minor tail protein Z like sequences from Escherichia coli, Salmonella typhimurium and Lambda-like bacteriophages.	7.04431e-06
NZ_CP019655.1\|WP_077995834.1\|3450274_3452137_-\|phage-terminase-large-subunit-family-protein	gnl\|CDD\|368649	pfam05876, Terminase_GpA, Phage terminase large subunit (GpA). This family consists of several phage terminase large subunit proteins as well as related sequences from several bacterial species. The DNA packaging enzyme of bacteriophage lambda, terminase, is a heteromultimer composed of a small subunit, gpNu1, and a large subunit, gpA, products of the Nu1 and A genes, respectively. Terminase is involved in the site-specific binding and cutting of the DNA in the initial stages of packaging. It is now known that gpA is actively involved in late stages of packaging, including DNA translocation, and that this enzyme contains separate functional domains for its early and late packaging activities.	0
NZ_CP019655.1\|WP_077997537.1\|3458606_3459134_+\|hypothetical-protein	gnl\|CDD\|237245	PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed.	3.48506e-63
NZ_CP019655.1\|WP_077995836.1\|3454014_3454425_+\|pilus-assembly-protein-HicB	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.6636e-19
NZ_CP019655.1\|WP_077995829.1\|3447046_3447403_-\|head-decoration-protein	gnl\|CDD\|376964	pfam02924, HDPD, Bacteriophage lambda head decoration protein D.	6.68405e-17
NZ_CP019655.1\|WP_077995828.1\|3446002_3447031_-\|major-capsid-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	2.21999e-82
NZ_CP019655.1\|WP_077995832.1\|3448480_3450040_-\|phage-portal-protein	gnl\|CDD\|377468	pfam05136, Phage_portal_2, Phage portal protein, lambda family. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage capsid and the tail proteins.	1.00533e-123
NZ_CP019655.1\|WP_036654839.1\|3456576_3457509_-\|dihydroorotate-dehydrogenase	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	4.70719e-154

>NZ_CP019655.1|WP_077995835.1|3452120_3452633_-|hypothetical-protein
MAKGENIHEKEVLTSELAAIVGKTPQWIRQLTRDGALKQVGRGKYRLGEAIQAYILHAAGGKEDDKKPRFIDEKTEHERIKKEKAALELAVMKGELHRAEDVRAEMADMLTSFRSRILGIPTKLGPQLLNISELADVTSILTKEMRSALTALADYDPDKFAEGYRNGPEG
>NZ_CP019655.1|WP_077995834.1|3450274_3452137_-|phage-terminase-large-subunit-family-protein
MDQRGKTRSLFREIARFVAPPADLTVSEWADRYRMLSSEASAEPGPWRTSRAPYQREPMNAITDLRYETIVFKWSAQVGKTEAILNAIGFFTEHDPSSIMAVYPTLEMARAFSKDRLAPMYRDSPKLKAVISQAKSRDSGNSILHKQFPGGQITLAGANSPASLASRPIRIALCDEIDRFPVSAGAEGDPVSLVAKRTTTFWNRKIIKVSTPTIKGSSRIEEDYEDSTMEEWCVPCPSCKEYQPFSWKQIKFEYDEERKKTIRVEHACRSCGALHGEQEWKAGTEETGKWVARKKHSTTRGFHLNELASTFSPWEKIVHNFKKAEKLMKKGDFEAMKVWVNTTLAEVWEEKGEKIDENVLMNRRELYHADVPEGVKVLTAAVDTQDNRFEVEIMGWGAGHESWRIQYHKIYGDLKQPQVWTDLDEFLQRTWEDKEGRQFRIAITCMDSGGHFTNEVYKFCKERLSRRVFAIKGESPGNGTYLPLVAGTSTNNRYKATVVRLGVDEGKSKVMSLLQQKPDQPGYCHFPLTTRDKDRGYNEEYFDGLTAEEVRTRYKMGVPYQVWVKVKARNEPLDLAVYNRAAVEILQPNLDKPLPPPGEKIIGSAPKPKRKRRGMISKGI
>NZ_CP019655.1|WP_077995833.1|3450036_3450258_-|hypothetical-protein
MWTLQEAQTYLRTWIEAEMAVASAQSYTIAGRSLTRAHLAEIRKQIQFWQNEIVKLNNPQRRSRIFRGIPMDI
>NZ_CP019655.1|WP_077995832.1|3448480_3450040_-|phage-portal-protein
MNMLERVISSVSPGWALKREVARQKRSIMNSGYSHHGASRIKKALQGWNFTGGSPDEDILDNLKVLRQRSRDLYMGGASLATGALKTARTNVVGTGLQLKPSLDADFLGLSEQETNTLKRTIEREFALWAESKNCDAMRMNDFCELQQLAFLSMLMSGDCFVLLPVLPRKHTLYDLRVRLIEADRCNTPATGQIDKDIKEGVEVDSDGQVVAYWFSSRHPLSSGGMGKMEWNRVEAFGKRTGRPNVLHLMEAERPEQRRGVPILAPVIESLKQLGTYTHAELMAAVVSGMFTVFVKTESSADPLGGAEEDEFTNESIYKLGNGAIVGLGPNESVETANPGRPNTAYDGFVTSILRQVGSALEIPYELLVKHFTASYSASRAALLEAWKMFRMRRTWLASDFCQPIYEEWFTEAVAKGRIPAPGFFDDPMIRKAYTKAEWHGPSQGQIDPLKEVKAAEKRVENGFSTGERETAELTGGDYEMNIRQLAREKAFREQYGLTNLGGDTDREEVLEYEENSEQ
>NZ_CP019655.1|WP_079940414.1|3447399_3448521_-|Clp-protease-ClpP
MKKFWNMKKTANNNGELTLYGNVSEYSWWGDDITPQQFRDDLYALGEVDDITVRLNSPGGDVFAGLHIYQVLKEHKAKVTVRVEGFAGSIASVIAMAGDQVIMPKGSIMMVHNPWTFTMGEASDLRQTADILDTIRDALVEVYMTKTGLQEDELNALLDSETWMTSAQAVEKGFADEEEQTMQISACLRGRTAIINGLEMDWSQYAQAPDLPKEERKSTDVLGKVQAVLAMPKQEREKNKEKGSPKSQDMTLDMFAQRHPDLYKAAVQAGIEQERCRIKALDELAAVPSARGVIAKAKYETGVTAQEVAVDILKAEKSRIEEAGNQRLSDSQDSGIQNLLPQDSATGGEAEEVEQKASGLAQAMKKIRGGKRA
>NZ_CP019655.1|WP_077995829.1|3447046_3447403_-|head-decoration-protein
MTEKYELKYDNLIAGGVSPVVSKGETVKSGGVYLRGTVLGRITEGGKLVPVDSSKTDGSERPYAVLAETVDAAKEDKAAAVYLTGEFNKDALIFGGSDTVGQHEVVLREIGIFVKTTV
>NZ_CP019655.1|WP_077995828.1|3446002_3447031_-|major-capsid-protein
MPSIYDLRTLISAVRQIPPANTFLGDTLFTESTPFDTEQVEVEFQKGKRKMAPFVSPLLPGKVMDRHGYTTSFFKPALIKPMRAITSIDLNKKLFGQNPFETSSPEERAQELLARDLVELDDYITRREEWMRAQLLFTGKVIQKGDGVDQVLDFDFDNKAVLSGTAVWSNPASDPLGDLGKWRLQVIQKSGITPDVVIMASDVATAFISNEKVQKALENRRINLANIDPKQLANGVTYHGTITSLGLELYSYDDWYLDDETDEELPMVPTGTLAIASTRAKFSMHYGAVTIVSKEEEFSTIRGSRVPQSWVTKEPAQRFLQVSSRPLPMPGNSDSWFVAKVL
>NZ_CP019655.1|WP_155121053.1|3445839_3445989_-|hypothetical-protein
MAIKAIWSIRHDDKEYDPGSILKGLKKEEEKKLVDAGVAEYVGKEPDEK
>NZ_CP019655.1|WP_077995827.1|3445531_3445843_-|hypothetical-protein
MKFKEQMSKDIQTFMCRDEFAEPHILDGREVWMIIEAFTLDGQPLPYAEGVSLHQIIVHVAEDELGYIPAQGQRSDLDGISVSVEKVSVDAGMLKIILEANVA
>NZ_CP019655.1|WP_077995826.1|3444983_3445535_-|hypothetical-protein
MRLKIDADTKAAMKVVQDVQKAVPAAARSALTRAGQGIKTEANRKVRELYTVKAKDVNAAMKITRDDDLHLRLTGKGKNIPLIKFQTTPRKPPKRPKTVMASVRKDGGKKAIPSAFIVQVGGHVGAFKRVGKKRLPIKELYGPPVPIMLGNDVVKKHIETEAQKRLSERLDHELNRRLGRIIK
>NZ_CP019655.1|WP_036654551.1|3453780_3453984_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MVNLNKAYSSREVIKILKEDGWIHKNTEGDHWHFIHPTKKGKVTVPHPKKGLKRRTTKSIFEQAGLI
>NZ_CP019655.1|WP_077995836.1|3454014_3454425_+|pilus-assembly-protein-HicB
MKYIYPAVFTPGEPDEGGFTVTFPDLPGCITEGDDLEEALHMAKDALGGHLYLMEEDGDEIPRSSQPDSIQLETGEFVSLIQANTDFIRERIQSKAVNKTVTLPKWLNDVAAEEGINFSQTLQDALKQKLEIKDFS
>NZ_CP019655.1|WP_077995837.1|3454453_3454657_-|hypothetical-protein
MKQQIENNFKYHAPKEGQPEKYTAIREKAKELACLIDDLCPSSREKSLGLTNLEQVVMWANAAIARN
>NZ_CP019655.1|WP_024094814.1|3455127_3456438_-|permease
MKTVFSSIQWVVFILAGSLVAPLAAGHALGLPPEDISSMMQRTFLLIGISGLLQTMFGHRLPLMENPAGLWWGVFTVYAGLIVSGTLGLEAGLQQLEMGMFIAGILFVVIALFKWTDALGRLFTPLVIGTYLLLLVAQLSGSFMKGMMGIGYLGSEEINLRVAVPAILTLILAMVMPRMRWAFLRNYSVLISLFVGWLLFIIFGVSQKQSLADTLFSAPEPFAWGMPQFDPGILLTSVFISLLLLTNMITSIHVMQGVIREKGGEVKPVRHNRTTLIMGVNTALGGVFSAMGCVPISGTAGFVLTTGIYQRLPFIIASFFMIGISFFPVLTSFFSSIPMPVGYATIFVPFASMIGLGLNEYKKIKLDEHNKFILGVSMMVGIGSMFIPAQAIGHLPGLLRTVANNGLILGMVTCIVLEQGRRLLDRKNGKQVSKSR
>NZ_CP019655.1|WP_036654839.1|3456576_3457509_-|dihydroorotate-dehydrogenase
MLDMTCKIAGVTFKNPIVMASGTFGFGKEYAQFYDLSMLGGIALKGLTLQPRCGNSGTRIYETPSGLLNSVGLENPGIKAFLEYDLDELGLLNTVLITNLGGGTLEEYVLGAKLLTDNENKRRALGLRGISMIELNISCPNVKEGGMAFGIETEIAREVVREVRQATGLPLAVKLSPNARDIVSMAVMCEEEGADAVSLVNTFTGMKIDIQKKQSVFTNLYAGLSGPAIKPIALRMVHQVARHVNIPVIGMGGISSAEDAVEFIMAGASIVQIGTYNFMNLRAGEELVRGLEQYMEREKIQTWDEIRGVV
>NZ_CP019655.1|WP_077995841.1|3457489_3458191_-|dihydroorotate-dehydrogenase-electron-transfer-subunit
MRLVLSNEQVAPDVFWMNIEGDYHGEMGQFYMLRAWDKYPVLSRPISIHDIGKGYISFLYRKVGEGTELLAALKPGDTLMLEGPFGNGYPYTENKVALIGGGMGTAPLLYAAKRLPNADVYLGFSGKSFRVEAFEQAAGKIVVNIGGYIMNDLEPDAYDAVYCCGSLGMMRALAERMKGSRARLYVSLEKRMACGVGACLGCSIATKHGNRKICSDGPVFAAEEVNLYAGHDL
>NZ_CP019655.1|WP_077997537.1|3458606_3459134_+|hypothetical-protein
MEFHTSDEWIVQRTGIRERRITTETEFTSHLCIRAVENLLESYGGSLEDVDLILVATHTPDVPFPSVASLVQKHFDVRHTGALDVNATCAGFTYALHMANSLITAGLHNKILVIGAEIPVEHTLYNLEYFGNTSAASIPLALHIGIKEGKVKKGDRILLYGFGGGYVHGGIIFTW
>NZ_CP019655.1|WP_077995842.1|3459217_3460054_-|glycosyltransferase-family-2-protein
MLVTSIIIPNYNGGRMLRECIRSIQTHTHLPHEIIVVDNGSSDKSVSYCLKKKIRVVRLPKKTGFPTACNAGIKIASGESILLLNNDTLVTKEWLDRMLACLNHDPKTGIVGPMSNYANGEQQISEPFTCLEEITAKMNEPNPLKWKEVNRIVGLCMLIKRELVEKIGLLDERFSPGHYEDDDYCYRALLAGFNLKIAGDVFIFHHGSASFKKYGEKYIRRLLDRNRKLFMEKWVMDPIVLTQKGTLFRNAKTEGGMPHTQDKEGDRKDERSSLSLGE
>NZ_CP019655.1|WP_104932757.1|3460040_3461057_-|glycosyltransferase-family-2-protein
MITYKNSGKASVHFTEPSKRSSAGRKEVQIHLKETFLPRKGRLLVSASSRPSLREATRKKQRKKQMPHASQNKKRALPQIQVMSRKRPDSVAVIVSAMNEEKTLGRLLNEMDRLAPQELIIVVNGCQDHTFDIAKQHPTATVLSYNEPVGHDVGRTIGAKVAVSDILLFIDADIPVSAEQLKPYIRAIQQGADVALNHMGPYLPVFADRDKVTVLKQFLNTSLGRSDLGADSMTAVPHALSRRALEIIGIENLMVPPRAHAMAIINGLTIVSPASVNVIKRNRRRAGNQGSLNPVSQMIIGDHLEAIHFVMQDLGVRYLHPDSMRRREFVGGAAHVSD
>NZ_CP019655.1|WP_077997539.1|3461061_3461838_-|glycosyltransferase
MKQDLDLQQDVMQEEFRPEVSVILPVYNESRTLPGVLQGIFGLHPSMEVIVVANGSTDGTRKLAEDMGATVLWYPEPLGHDVGRSVGASHAKGNVLLFIDGDIVIPSKELVPFIKAVSSGVDVALNKYKGLTHQHRVHDVVLAKHALSIVMSRQDLLGTSMTAIPHALSRRAVETLGTECLAVPPKALALAVLKGLRVEPVHYVRVGANNPRRRREHGPDPLTGLIVGDHLEALHEWIKYTDMRGGFTDHMRQRHLVR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019655_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_9

3740496-3740984

TypeI-A

Consensus_repeat	Method
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRISPRCasFinder
GTTTCAATACACCTTGTGTTACTGTCAAAC	CRT
TTTCAATACACCTTGTGTTACTGTCAAAC	PILER-CR

7 spacers

csa3,c2c9_V-U4

The CRISPR arrays of NZ_CP019655_9

>merge|NZ_CP019655|9|3740496-3740984|CRISPRCasFinder,CRT,PILER-CR
GGGTTTATCCGCCTTGTGTTACTGCCAACATTCAACGTAAACCGACAGAACTCTTGCTGCCGACAATTTCAATACACCTTGTGTTACTGTCAAACCATTGATTCATCTTCTTCACAATCCTCCTCTGCAAGTTTCAATACACCTTGTGTTACTGTCAAACGCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCGTTTCAATACACCTTGTGTTACTGTCAAACCAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAGTTTCAATACACCTTGTGTTACTGTCAAACCAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGGTTTCAATACACCATGTGTTACTGTCAAACTCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTGTTTCAATACACCATGTGTTACTGTCAAACTTGACGATTAAATCAAAATCAGACGGATATCCGACAGTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019655|9|9|3740496-3740984|CRISPRCasFinder
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019655|9|6|3740496-3740984|CRT
GGGTTTATCCGCCTTGTGTTACTGCCAACA	TTCAACGTAAACCGACAGAACTCTTGCTGCCGACA
ATTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAA
GTTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCC
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTA
GTTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAG
GTTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGT
GTTTCAATACACCATGTGTTACTGTCAAAC	TTGACGATTAAATCAAAATCAGACGGATATCCGACA
GTTTCAATACACCTCGTGTTACTATCAAAC

>NZ_CP019655|9|8|3740562-3740918|PILER-CR
TTTCAATACACCTTGTGTTACTGTCAAAC	CATTGATTCATCTTCTTCACAATCCTCCTCTGCAAG
TTTCAATACACCTTGTGTTACTGTCAAAC	GCTAAAAAGTATGTGATTGACAGGCTCACCCACAGCCG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAATTGCGTTCGGGTTGTGCTTTATACAGTAATTAG
TTTCAATACACCTTGTGTTACTGTCAAAC	CAGTAAAACCGACCAGTACCGGGCGGCGGTCCATAGG
TTTCAATACACCATGTGTTACTGTCAAAC	TCGCAAAAGAATATCTGCAAGATCCCATTTCCAGTG
TTTCAATACACCATGTGTTACTGTCAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_077996010.1\|3731771_3733688_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226481
NZ_CP019655.1\|WP_077996012.1\|3735461_3735794_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_023483464.1\|3744222_3744609_-\|DUF1878-family-protein	unknown	unknown	gnl\|CDD\|370213
NZ_CP019655.1\|WP_036658190.1\|3736112_3736382_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP019655.1\|WP_077996015.1\|3744630_3745089_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_155121056.1\|3745780_3745930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_155121057.1\|3748001_3748154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996008.1\|3730802_3731027_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996017.1\|3747375_3747537_-\|transposase	c2c9_V-U4	-	gnl\|CDD\|223747
NZ_CP019655.1\|WP_149867721.1\|3745919_3747128_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996019.1\|3748794_3749499_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077997555.1\|3736414_3736708_+\|mRNA-degrading-endonuclease	unknown	unknown	gnl\|CDD\|182138
NZ_CP019655.1\|WP_077996011.1\|3733947_3735234_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP019655.1\|WP_077996014.1\|3742639_3744088_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP019655.1\|WP_077996009.1\|3731125_3731740_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP019655.1\|WP_077995375.1\|3741260_3742484_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP019655.1\|WP_023483432.1\|3736959_3737250_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP019655.1\|WP_036658187.1\|3739861_3740158_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996018.1\|3748143_3748752_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_077996013.1\|3737246_3739757_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|163244

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_023483464.1\|3744222_3744609_-\|DUF1878-family-protein	gnl\|CDD\|370213	pfam08963, DUF1878, Protein of unknown function (DUF1878). This domain is found in a set of hypothetical bacterial proteins.	0.000671324
NZ_CP019655.1\|WP_077997555.1\|3736414_3736708_+\|mRNA-degrading-endonuclease	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	3.30684e-31
NZ_CP019655.1\|WP_077996011.1\|3733947_3735234_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.65516e-62
NZ_CP019655.1\|WP_077996014.1\|3742639_3744088_-\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.06528e-32
NZ_CP019655.1\|WP_036658190.1\|3736112_3736382_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	1.40855e-22
NZ_CP019655.1\|WP_077996009.1\|3731125_3731740_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.37605e-12
NZ_CP019655.1\|WP_077995375.1\|3741260_3742484_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.86744e-145
NZ_CP019655.1\|WP_023483432.1\|3736959_3737250_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	9.84683e-15
NZ_CP019655.1\|WP_077996010.1\|3731771_3733688_-\|AAA-family-ATPase	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	2.15696e-17
NZ_CP019655.1\|WP_077996013.1\|3737246_3739757_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|163244	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol. [Cellular processes, Detoxification].	2.15442e-159
NZ_CP019655.1\|WP_077996017.1\|3747375_3747537_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30153e-05

>NZ_CP019655.1|WP_036658187.1|3739861_3740158_+|hypothetical-protein
MKSSFLGIIGVAILALGIGTAVYASEAKPYSSKEMIPDMEQRYPYMDMERMPTRMEQRHPHMDMKQMCTHMEQRHPHMDMEQRRTHMEQRHPQLNYSE
>NZ_CP019655.1|WP_077996013.1|3737246_3739757_+|FAD-dependent-oxidoreductase
MNKKVLIVGGVAGGASAAARLRRLDEDTEIVMFEKGEYVSFANCGLPYYIGDTIQDREKLFVQTPEAMRRRFNIDVRVNSEVTGIDPHTKTIRVQSKERGVYEETYDYLILSPGAKPVRPPLPGIDSVRIHTLRNIPDTDRIKASVTEEGTRSAVVIGGGFIGVEMAENLREIGLDVTLVEAGLQILAPFDPEMAGVLSKELEEQGVRLIIENSVQSFHDKDNYIETVLANGSVLQSDIVILAIGVSPDTAFLRDSGLELGPKGHIIVNNKLETNLDGVYAVGDAVEITDFVTKQKTAIPLAGPANKQGRIAADNICGLDTIYEGSQGTSILKVFGLTGAATGSNEKTLQKLGLPYKVNYVHPNSHASYYPGAAPLTIKLIFNDKGTVLGSQIVGYDGVDKRIDDIATVIRLRGTVTDLTELELAYAPPYSSAKDPVNMAGYTAENILAGRTEVFTPGDLLKRNKETTILVDVRTEMEHRNGHIEGSLSIPIDDLRSRMHELDPNKEIWVYCQVGLRGYTASRILIQHGFKVKNLTGGYKTYQMAQFKPGKVKPPVTPSRLQSETESETVYLSHRWEQQDHTSSAKQPLSFDESLDACGLCCPGPLIQVKQQMDRLQDGQVLKVTASDPGFYEDIQAWAGMCGNPLLQISKLNDGTVEAYIQKESTSAAPVEKTTSQTPIPENSTMVVFSGDLDKAIASFIIANGAASSGKKVTIFFTFWGLNIIRKSEKIPVSKSLIDKMFGAMMPRGSRKLALSKMNMMGMGAKMIRSVMKKNNVSSLEELMETALQQGVEIVACQMSMDVMGIKKEELIDGVRVGGVGYYLGKADKSGINLFI
>NZ_CP019655.1|WP_023483432.1|3736959_3737250_+|winged-helix-turn-helix-transcriptional-regulator
MNNDFERYNEAAELLKALAHPVRLCIVKGLMEKGSCNVSFMQNCLGLPQSTVSQHLQKLRALGIVAAHRTGLEINYSVENEKVKQLVQIFFREESS
>NZ_CP019655.1|WP_077997555.1|3736414_3736708_+|mRNA-degrading-endonuclease
MDFNPQIGHEQAGRRPGLVVSPTSFNRVTGFIVVCPITRTVRNYPYEVPLPSDLMTEGVVLAHQVKSLDWKARKAEVREKVPKEIIDDVLDLIHTFL
>NZ_CP019655.1|WP_036658190.1|3736112_3736382_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MGKDRERMSVMSTIVSKWGNSLAIRIPSNLAESLNIKEGSEVELSIMDSTLTIKPKKRKPTLEELLAKITDGNHHEEIDFGKPEGNEVW
>NZ_CP019655.1|WP_077996012.1|3735461_3735794_-|hypothetical-protein
MKILSKALLSSIAAFGLLAGSVSAQTPGQQAVTSQQAGVKSIIVNPLIKLKVGWSTWIGMPGSKVVLVSGEGVVSLDQYGKVVGLSPGNATVYNYAADGNLYINHIQVTY
>NZ_CP019655.1|WP_077996011.1|3733947_3735234_+|MFS-transporter
MNPEPKSATETALLRNRNYRFLLVADILSSPGYYIYIIAVEWLMLTMYDSRSYLGLMLFSSSFARLLFTIYGGIIADRLNRKLIILVTQWGEAFIIAAILLCYITDVISPVFLIVASFLFGILSAFASPAYESIITSIVEKSSLQRGNALLRMANQYSLIIGPLISSTLIVTIGFVGVFSFSLLTILASSLLVSFIQIPDQQSSEHSTSQWDDFKASVAHIRKHQVLPIIMGLGFVMNFFVTGPVAVVVPILAKDILEGNAFVLGMLEVSLGLGFILGSITVSIRKPFNRPGLAILYSLLVMVLAYSALGFVQQLILSMFALLLIGFFIQLMNIPLFTYIQTNTEANMIGKVMSLFISVASGLTPLSFAMVSYLLHLHIDIQLIIRIFGAFLIVITAGTFLISPIRNLTYENSPQGAKQPEKDQGVSS
>NZ_CP019655.1|WP_077996010.1|3731771_3733688_-|AAA-family-ATPase
MAYMIPETIPRRATAGERVLFQTLKDYLPGDYIAYYEPEIKGKKPDFVVIGPDLGLVVLEVKDYTRHTLFSLNRNEWQLHTSSGQITTVSNPYNQARDYAYEIVKVLTRDKNLIQLEGNHIGKLKFQYGYGAVFTRLKQKDFIQNNIHQIIPPEFVFCRDEIDPDEEGFSEEVLMEKLLNMFIVRNPRRKVLSNEDIQAIRYHLFPEVRISAEPVYYQDQLLLSLHDIKTMDLYQENLAKQLGDKHRLIRGVAGSGKTLVLASRTKILARTYPEWRILVLCFGIPLSRSLRQLIDRMMEEADDLIDIIQSSPESGCSPGKQIEVYNFHEWLRNKLNTREELIPQLLGKIEKNETILPTYDAILIDEGQDFESEWLKLLGHMLNPKTQSLLLVEDRAQSIFKRKNSLAQDTGLDFRGRSKILTINYRNTAQIVQFAWDFYRTHSLLQNKVKQGTTEGINIIPPQSTRRQGPEPRIARFDCFVNEIKDVVEHIRKLHREHRIPYGEMLILYRVKNTYKQSYIDIIKSLLKQAHIPYTWITENSESKRNFNRAEQTVKISTIDSAKGLDFRAVFIVNIENMPFVLEEEEEREVSLFYIGMTRSLEWLFLSYSGDSKFTKYLDDIVLKRKSSSIHTQSAIKL
>NZ_CP019655.1|WP_077996009.1|3731125_3731740_+|sigma-70-family-RNA-polymerase-sigma-factor
MDAMTKTVQPSEESIKELLNTMSKNPVIHQFLKRDEHYQLLLENLSNPTPENSRQLDESFRSFFFELRFTTYISSLIRNAAIDFDKKIRRNQRRLVFFPSNDPSHLHFVHPSLQVQPDLNPDSLQLEDMVTNEVLHEAIQQLTGKEKSVLLASYVWDYSDTEIARLNKVSQQSVSKTRLKALSKLRKYLVESGYGKSEEEKAGD
>NZ_CP019655.1|WP_077996008.1|3730802_3731027_+|hypothetical-protein
MEELLASRTRYRTLKIELLKLSKRIEGADPEDILFYQEICEKYASHLKAIETACYERIGASICNCQFHSEQQCN
>NZ_CP019655.1|WP_077995375.1|3741260_3742484_+|IS256-family-transposase
MAQYQINVDSQLLHQLFLGNSQDAGVAKLLESVLNQVLQAQVSEQVEADRYERTENRKAYRNGSYPHGLHTRVGTITLSVPRIRGGKFTTELFSRYQRSEQALILAMMEMVVNGVSTRKVSQVTEELCGTEFSKSTVSDLCKRLDPIVTAWNNRSLADSLFPFVLVDAMYLKVREDGRVRSRGIMIAIGVNTEGYREVLGLMLGDTESEASWSEFFISLKGRGLRGVDLITSDDHGGLVRAVRQQLQGVTWQRCQTHFTRNVLEASPKALKDEIHGRLRSILDAPDTGTARLLLKQTLAAYEDKAGKAMGVLESGFDDATAVLMLPERYRKRLRTTNSVERLNEEVRRRERVIRIFPNRESVIRLIGALLMEQDEKWAAGKKYLDMTEYMEWRKDRPKSDAKVTRIM
>NZ_CP019655.1|WP_077996014.1|3742639_3744088_-|IS1182-family-transposase
MLRKTGYEGRSQISMVSLDELVPIDHLVRKIEYAIDFSFIYDMVRDVYCEDNGRPSIDPVVLIKIALIQCLFGIRSMRQTIKEIETNVAYRWFIGYDFSQPIPHFSTLGKNYVRRFRDTGLFEGIFHRILEEAARHGFIEPDVLFIDATHVKASANKNKYVKQIVQEQSRKYQDQLDEEINQDRALHGKKPFEKKPNVTQKEVKVSTTDPECGLFVKGEKERVFAYSFHTACDRNGFVLGVKVTPGNIHDSQVFEDVLHEVTRVVPAPQAVAADAGYKTPAICKMLQEQEIRPVLPYTRPKTKEEFFKKHDYVYDEHYDCYLCPANAILSYETTNRAGYKMYRSNPAICQACPFRTQCTESKEAVKRISRHVWAECVEEADHLRHTEENKRIYAERKETIERVFADLKEKHGMRWTTLRGLKRVTMQAMLVFSAMNLKRMATWLWKRGRPSDKFNFVFEIGIKNIKNSRYCSISRDFVFNLK
>NZ_CP019655.1|WP_023483464.1|3744222_3744609_-|DUF1878-family-protein
MEQEIKKVKYHQKLMLTMILHDDPERFAFYHQIINYDLDEQIEKSVLCIISLFNNRLSKNDNLRFEKDYFDSIGLDVIYDVDVTPTIDEYESYLQKLSIPIDPKYLLMAINKQKESDDACQYLLQQYK
>NZ_CP019655.1|WP_077996015.1|3744630_3745089_-|hypothetical-protein
MFKFKKLILASLAVATMLTIAPMPSFAAENTTIEVKQVPMNWGSIDFKKNANNQSVVTMDQDGEVTAQGWKKSVVVWGLRNGGSAFHKITEWLGFGTKEAKYLKDNASKIADALERFESQVEQRLVDFMIFQCGIPQGSARVIAKAITTFIL
>NZ_CP019655.1|WP_155121056.1|3745780_3745930_-|hypothetical-protein
MKIKNWILCITVAITLIGGSSAFSTTTQATASNATIALSDHGVGGDYAS
>NZ_CP019655.1|WP_149867721.1|3745919_3747128_-|DNA-binding-protein
MKQLDTLTEALGLPEGHYYDLYLAECSNNNRVSIPRIKSFLIRCAELGKTDLIMNAIHMSVEHPKYTELLFSVAEELYLNGLVEESLLFYEEVIEEEKFNHSERLAISHYRVFRASIGSDADENFKAVIRFEGFRKNLPENFQLDALFQLARICFSLKKWNLAEQFADELRILVTIRYQEELLVQRSKRTSEPSIREHPLVVYYGQSYLMKSVALTKQGYYEKAKQYLQGYEDLGWFEILDEHGKKEVDKFRLWAQANKYGIELLLGNTSILDEYTNYLTDHPNEIPAGLCNILEAANTYAFNVDYILDKIPITSIGKEATAIEIERHCKIHYQKAIYAFNHHRFVEGLETILYCLPLSISTKKHSQTLLFVGRFQQYIKHASDSQKEQFANIMKEVSVDEN
>NZ_CP019655.1|WP_077996017.1|3747375_3747537_-|transposase
MGIDLGLLHLAVTSDSTMFKAPKQLRRNESHLKQLQRAITRKKRGSKRTSQIA
>NZ_CP019655.1|WP_155121057.1|3748001_3748154_-|hypothetical-protein
MKIKNWILCITVAITLIGGSALSTAIQKVATENPIMALIDHGIGDHKASS
>NZ_CP019655.1|WP_077996018.1|3748143_3748752_-|hypothetical-protein
MYYGQSYLIKSAALFKQGYYEKAKQYIEGYEDLSWFEVLDEQGKKEVEKFRLWAKANKYCIELLLGNVSVLDEYTNYLAEHPNEIPTGLARIMEAANAHGFSIEHILERFPEFSTDNNKVEIVRIEQHFRFHYQKAIYAFNQQHFAEGLETLLYCLSLSISNKEHSETVLCAAQLLQYLNYASDSQKEQFANIMKGVLKGEN
>NZ_CP019655.1|WP_077996019.1|3748794_3749499_-|hypothetical-protein
MDSRISLRDELEKAIAETGCTLSQLQEMGGSHVGNLSASLRGKTLRPITIKQLDKLTEVLGLPEGYYYEYYLAECFYKDKVARPRMGTFLYRCAELGKTELIMKAIDMLAECSRYTELLFSVAENLYMNGLLEESILFYEEVVEEEKYHHSDRLAISHYRIFRITIGTDAEENYKAVIRFEGFRKKLPEDLQLEALLQLAEVCLCLKKWRFTEQFADELRIVATIRYQEELLKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019655_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019655_10

4182325-4182462

Orphan

Consensus_repeat	Method
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019655_10

>merge|NZ_CP019655|10|4182325-4182462|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGACTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCGTTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

>NZ_CP019655|10|10|4182325-4182462|CRISPRCasFinder
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTACCTTAGA	CTACCATTTTTGCAAAGCAAAATATGGCCCATTCAGATCGGATTTTTCGAAGCG
TTACTGCTTCGATCAGGCTGCGAGAAAATATCCTGCCTTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019655.1\|WP_024095356.1\|4171773_4172379_-\|anti-sigma-W-factor-RsiW	unknown	unknown	gnl\|CDD\|227949
NZ_CP019655.1\|WP_079940468.1\|4189254_4190046_+\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	unknown	unknown	gnl\|CDD\|200573
NZ_CP019655.1\|WP_077996252.1\|4173254_4176038_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|366019
NZ_CP019655.1\|WP_024095358.1\|4177330_4177951_-\|cytochrome-aa3-quinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|131943
NZ_CP019655.1\|WP_077996254.1\|4179917_4180892_-\|cytochrome-aa3-quinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|273621
NZ_CP019655.1\|WP_023482142.1\|4197679_4198072_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP019655.1\|WP_077996258.1\|4194346_4195048_-\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019655.1\|WP_149867732.1\|4190331_4191120_+\|spore-gernimation-protein	unknown	unknown	gnl\|CDD\|380050
NZ_CP019655.1\|WP_042119364.1\|4168193_4169534_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP019655.1\|WP_023483469.1\|4177009_4177330_-\|cytochrome-aa3-quinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|200218
NZ_CP019655.1\|WP_077997570.1\|4169558_4170743_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
NZ_CP019655.1\|WP_023482933.1\|4170783_4171599_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP019655.1\|WP_158672826.1\|4188526_4189138_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP019655.1\|WP_023482935.1\|4172448_4173027_-\|RNA-polymerase-sigma-factor-SigW	unknown	unknown	gnl\|CDD\|182012
NZ_CP019655.1\|WP_077996257.1\|4191187_4192249_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_CP019655.1\|WP_024095360.1\|4188208_4188427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019655.1\|WP_036655469.1\|4192301_4193057_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
NZ_CP019655.1\|WP_079940469.1\|4193149_4194328_-\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235227
NZ_CP019655.1\|WP_077996253.1\|4177961_4179899_-\|cytochrome-aa3-quinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131928
NZ_CP019655.1\|WP_077996259.1\|4195766_4197032_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353

Protein	Function_ID	Function_description	E-value
NZ_CP019655.1\|WP_024095356.1\|4171773_4172379_-\|anti-sigma-W-factor-RsiW	gnl\|CDD\|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	1.03984e-16
NZ_CP019655.1\|WP_079940468.1\|4189254_4190046_+\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	gnl\|CDD\|200573	cd10949, CE4_BsPdaB_like, Putative catalytic NodB homology domain of Bacillus subtilis putative polysaccharide deacetylase PdaB, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by the putative polysaccharide deacetylase PdaB encoded by the pdaB gene on sporulation of Bacillus subtilis. Although its biochemical properties remain to be determined, the PdaB (YbaN) protein is essential for maintaining spores after the late stage of sporulation and is highly conserved in spore-forming bacteria. The glycans of the spore cortex may be candidate PdaB substrates. Based on sequence similarity, the family members are classified as carbohydrate esterase 4 (CE4) superfamily members. However, the classical His-His-Asp zinc-binding motif of CE4 esterases is missing in this family.	3.47886e-104
NZ_CP019655.1\|WP_077996252.1\|4173254_4176038_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
NZ_CP019655.1\|WP_024095358.1\|4177330_4177951_-\|cytochrome-aa3-quinol-oxidase-subunit-III	gnl\|CDD\|131943	TIGR02897, AA3-600_quinol_oxidase_subunit_III, cytochrome aa3 quinol oxidase, subunit III. This family (QoxC) encodes subunit III of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.56671e-86
NZ_CP019655.1\|WP_077996254.1\|4179917_4180892_-\|cytochrome-aa3-quinol-oxidase-subunit-II	gnl\|CDD\|273621	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b). [Energy metabolism, Electron transport].	5.53876e-111
NZ_CP019655.1\|WP_023482142.1\|4197679_4198072_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.11335e-85
NZ_CP019655.1\|WP_077996258.1\|4194346_4195048_-\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.33214e-107
NZ_CP019655.1\|WP_149867732.1\|4190331_4191120_+\|spore-gernimation-protein	gnl\|CDD\|380050	pfam17898, GerD, Spore germination GerD central core domain. This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination.	1.22791e-38
NZ_CP019655.1\|WP_042119364.1\|4168193_4169534_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP019655.1\|WP_023483469.1\|4177009_4177330_-\|cytochrome-aa3-quinol-oxidase-subunit-IV	gnl\|CDD\|200218	TIGR02901, cytochrome_aa3_quinol_oxidase_subunit_IV, cytochrome aa3 quinol oxidase, subunit IV. This family (QoxD) encodes subunit IV of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	5.26214e-31
NZ_CP019655.1\|WP_077997570.1\|4169558_4170743_-\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	7.13019e-49
NZ_CP019655.1\|WP_023482933.1\|4170783_4171599_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	7.24966e-98
NZ_CP019655.1\|WP_158672826.1\|4188526_4189138_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	1.34544e-17
NZ_CP019655.1\|WP_023482935.1\|4172448_4173027_-\|RNA-polymerase-sigma-factor-SigW	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	2.02161e-99
NZ_CP019655.1\|WP_077996257.1\|4191187_4192249_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	9.31048e-121
NZ_CP019655.1\|WP_036655469.1\|4192301_4193057_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	3.76868e-101
NZ_CP019655.1\|WP_079940469.1\|4193149_4194328_-\|sulfate-adenylyltransferase	gnl\|CDD\|235227	PRK04149, sat, sulfate adenylyltransferase; Reviewed.	0
NZ_CP019655.1\|WP_077996253.1\|4177961_4179899_-\|cytochrome-aa3-quinol-oxidase-subunit-I	gnl\|CDD\|131928	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I. This family (QoxB) encodes subunit I of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	0
NZ_CP019655.1\|WP_077996259.1\|4195766_4197032_-\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.08317e-39

>NZ_CP019655.1|WP_077996254.1|4179917_4180892_-|cytochrome-aa3-quinol-oxidase-subunit-II
MIKPNKPLFTLGLFLTFFLLSGCDYVVLDPKGPVAEEQKNLILYSIIFMIFIILVVYALFFIIVVKYRERKDKLDYEPPQKEGSKLLETIWTIIPIIIVIALSIPTVKAIYAIEKPKDESQEPLVINATSVDWKWVFSYPEQNIETVNYIKIPAGRPVLFKLTSADSMASFWVPALGGQKYAMAGMENKLYLEAHEPGVFDGRNANFTGEGFAHQTFKVTAQTKEDFEKWVNESKQTAPPLTQDQYDQLMLQGPADVMTFSSTHLQWVDHAREQDYALRVREKLGQLPKGTVDRKKNEDIPLSYMGSYESEKSGHEYQSHSGSH
>NZ_CP019655.1|WP_077996253.1|4177961_4179899_-|cytochrome-aa3-quinol-oxidase-subunit-I
MKWDEFFVTGDPLIYGADASIILASIAIVAGLTYFKKWKWLWREWLTTVDHKKIGIMYIISAVLMLFRGGVDALLMRTQLAVPDAGFLDSTHYNQIFTTHGTIMIIFMAMPFLIGIMNVVLPLQIGARDVAYPYLNAVSFWSFFMGAMLFNISFVIGGSPEAGWTSYMPLASNELSPGPGQNYYLLGLQISGIGTLLTGINFIVTILKMRAPGMKLFKMPMFAWSSLVTSIIIVFAFPILTVALALMTFDRLFGAHFFTLAGAGMDMLWANLFWLWGHPEVYIVILPAFGIFSEIISTFSRKRLFGYHAMVYSMLIIAGLSFLVWVHHFFTMGSGELVNSFFSISTMAIGIPTGVKLFNWLFTMYQGRIRFTTPMLWSLGFIVNFVIGGVTGVMLAMAAADYQYHNTYFLISHFHYVLIAGTVFACFAGLTYWYPKMFGHKLNERIGKWCFWIFMIGFNVCFMPMYFLGLAGMPRRIYTYPAETGWGGMNMVATIGAFLMGIAFLLLVYNIYYSFRYEKREETGDAWDGRTLEWATPKAIPPHYNFAAVPKVESLDAFWHMKMEKKKWIVKDNLQPIHMPSNSGVPFVMGVFFFIAGFGLVFEWFPMAIAGGIGVILTMIIRSFDYDQGFYVPLKEIEHDLSSVK
>NZ_CP019655.1|WP_024095358.1|4177330_4177951_-|cytochrome-aa3-quinol-oxidase-subunit-III
MEIAHGHDKSNSGAPLEYQSETGRLNILGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIAVHELRRRNVKGLVLWLVITLALGLGFLGFEIKEFVEYVHEGATIGTSAFWSSFFVLAGTHGAHVTLGIGWMILIIFQLLKRGLTPFTSSKVFIVSLYWHFLDVVWIFIFTVVYLARMVM
>NZ_CP019655.1|WP_023483469.1|4177009_4177330_-|cytochrome-aa3-quinol-oxidase-subunit-IV
MSNSHDTSAEHKGFPWKHVVGYLVSIVLTLLALWVAFKSGFSINVLMTFIYILAFLQAALQLLMFMHMTESSNGKYQTGTMLYAVFIAIVIAAGSVWVMSSGHAAH
>NZ_CP019655.1|WP_077996252.1|4173254_4176038_-|phosphoenolpyruvate-carboxylase
MSDNEMVFQRNVTNNLLRRDISFLGHILGEVLVHQGGNGLLTVVEKIREMSKSLRAQYNPEVFREFKEIIHSLNPEIRHQVVRAFAIYFQLVNIAEQNHRIRRKRDYERTSGVMIQPGSIESIIQHLKQKNVPAEELKEMIGGVTLELVMTAHPTEAVRRTVLNIHQRIAKDVMLLDNPTLTYREREQLREKLQAEVMTLWQTDELRDRKPTVLDEVHNGLYYFDETLFDVIPEVYQELERCLTKYYPSETWHVPTFLKFGSWIGGDRDGNPAVTSRVTWDTLELHHQLALKKYEEILHEIRDHMSFSKNIVNVSEELLASLQADQEALGRRDVWPNEKEPYRIKIGYMIQKIRNTGNDQIARFQKYNKPEELINDLVIIERSLRNHYADFVADAYINKLIRQVELFGFYVAALDIRQHSKEHELALDEILSKMGIQDHYSELDEEMKIDLLTRLLNDPGPITTPYLEYSESTQECLDVFKTVKQAQKEFGETCITSYLISMTQGSSDLLEVLLFAKEVGLYRKEKDGTITSTLQPVPLFETIEDLHAAPEIMKTVYEIPAYRESVEAYGDRQEIMLGYSDSNKDGGVITANYELRLALRSITAASDKYGVKVKFFHGRGGSLGRGGMPLNRSILTQPADTIGGGIKITEQGEVLSSRYSLQGIAYRSLEQATCALITATVISRKPEVLPYEAEWDEIMVGISEAAYNKYQDLIFRDPDFLTFFKETTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWVFAWTQSRYLLPAWYAAGTGLQSFYQGKEENLQIMRTMYEKWPFFRSMIDGLQMALAKADLLIAQEYARMVKDQEAGQRIFEFIREEFKLTSSLILKITGQKGILDNVPVIQESIRLRNPYVDPLSYLQVDLLTELRALREEGNDDAKLLREVLLTINGIAAGLRNTG
>NZ_CP019655.1|WP_023482935.1|4172448_4173027_-|RNA-polymerase-sigma-factor-SigW
MNVVEVRLAKLARKGDRGAFAELVNLYKDKIYHLAYRMLSNSQEAEDAVQETFLRVYMNLERYDVKQKFSTWIFRIATNLCIDRLRKRKPTYSLDAEMPDSEGNDFYAMLPSKEDTPEDQVILSETQEHIRCAINTLPVKYKTIVVLRYLHDMSLQEISDVLNIPVTTVKTRVHRGREYLRQKLSDEYQKKR
>NZ_CP019655.1|WP_024095356.1|4171773_4172379_-|anti-sigma-W-factor-RsiW
MDCKQALPLMHEYLDGDLQGADALALKEHLIACPGCRKLYKQMETTDALVKSIPTAQLPDDLTDRIMTKLPPEKKRNSVVHWLRRHPGLSVAVVFVVVMLGSFLTLWDENKQVMVKGPESGQVIIDGNTVIVPEGVTVNGNLVVQGGELDVEGELDGNLTLIDGTLNLASTAHISGNVQRINESIGWLWYKVNEFFSSFTK
>NZ_CP019655.1|WP_023482933.1|4170783_4171599_-|TIGR00159-family-protein
MEYFAVFSFNDIVDILIVSYVIYKLIMLIRGTRAIQLMKGIFIVVATWAFSFLFKLNTLQWMMNQMFNIGVIAIIIIFQPELRRALEQLGRGKLFSRSNDLDQDVNKRIAEVIKALNYLSKRKIGALIVFEKETGLTDYIESGIPMESKISSELLINIFIPNTPLHDGAVIIRGHQIMAAGCYLPLSENPFISKELGTRHRAAIGMSEVSDAVCLIVSEETGQISLSLNGQIVRDIKEESLISKLFEQLKPQGRSGDKNPFKKWWEGRRRG
>NZ_CP019655.1|WP_077997570.1|4169558_4170743_-|hypothetical-protein
MLGIMLWVVVRMDGNTGNISSVGLKEQTISNVAVVPKYDSSQYYVSSIEPSEVTIRLKGRQFAIDKVSTSNYKIELDLTKASAGEYYLAPMAVGLPSSLDWEIYPRTVKVAIEKQQKKEVPVVIDVTGTPKEGFKAGQPIVKPNRVHVTVPDSKADLVDSVHGEISVDQADSTIKQQVKLRAFDKKGKELDFEVSPAVVDVEVPVTMPFKAMPLQIKLVGDPPPGFAVASVKQSTDKVTVYSNSPNDLDKMEFYEGPEVNLADLKETKKFTLDIPHRNNVTQTDPDKVDVTVEIVPSVTKQVENFPLNITGLAKNMNAKITTPESGQISFTMEGAQTLLNEVKLEDIQAAIDVTNLPPGDHEVTVNINLPPYIKNATGEIKATVTITEKKKRAK
>NZ_CP019655.1|WP_042119364.1|4168193_4169534_-|phosphoglucosamine-mutase
MGKYFGTDGVRGIANRELTPELAYKIGRCGGYVLTGKAEHPKVIIGRDTRISGPMLEAALVAGLLSIGANVIRVGVVSTPAVAYLTRTLDADAGVMISASHNPVEDNGIKFFGGDGFKLLDETELEIERLLDAETDELPRPIGGNIGSVLDDEELKFKYAEFLKSTVDVSFEGMKIVLDCANGAAYELAPKVFKDLGAEVITMAAYPNGTNINDHCGSTHPEKLKELVVKEKADLGLAFDGDADRLIAVDENGEEVDGDFILSICGHDMHQSGKLKQGTIVTTVMANIGFFKGIEKVGLKAVQTAVGDRYVMEEMRKGGYNLGGEQSGHVIFLDHNTTGDGILTGLQLVNTVRKAGKKLNEMKSIMRKFPQVLVNVRVGDKNKLKDNQAVADVIQAVEAELGSNGRVLVRPSGTESLIRVMAEGPDKDQVETHVQQIAEIVQRELC
>NZ_CP019655.1|WP_024095360.1|4188208_4188427_-|hypothetical-protein
MLGFLFNDRECKELDYVLRKELDEMLFDLNDKRLDEEIKAAIEARYRTVFRMYARVATPKEISKYARNRVYH
>NZ_CP019655.1|WP_158672826.1|4188526_4189138_-|stage-II-sporulation-protein-M
MKFKPLWRHFREMKHYFIATTLVFVVGIFLGAVYNQQFYDFLAAQTKGMKDLVNKINSQETPQIWFFVVIFLNNSVKALLFIFSGLFFGLLPLFSMISNGLLLGFLISRTPASDVFEMVAKGILPHGIIELPAIIIASAYGLKLGGLVFKGMFSLFRPAALSNVKNELIQVLKLTGPLAVVLVGALFIAAIIESTLTFWLAQG
>NZ_CP019655.1|WP_079940468.1|4189254_4190046_+|polysaccharide-deacetylase-family-sporulation-protein-PdaB
MNYFYVMNGKKLKQAIFIIAALLFAAGIVYAERENISAFAGKDTGPKAIYSVPTDKKVIALTFDISWGDKRAEPILKILEEKGVKNATFFLSSPWTKSHPEIVKKIKDGGFEIGSHGHKHVNYSSLNDEEIRKQIQTADSMLADAVGQKPNLIRMPNGDFDKRVLKIAKDLGYSVIQWDTDSLDWMNIGTDKIIDRVMKKAHPGDIVLMHASDSCKQTHEALPVIIDQLKAKGYEFVTVGELLKQAKAENKDVQDQAANLHIT
>NZ_CP019655.1|WP_149867732.1|4190331_4191120_+|spore-gernimation-protein
MNVLTKLRFIPVLLFVILLVSCGPDTSQSSGTNQGNYKDTKTMVMDILKSEEGKKAIKEASKGGGNSGSGSGGGAMSMMSESQLAQLKIAAKDVLTSTDNSKLLQEIMKDPQFAGDFAKAIKNDNKQLQKDLMKDPEYQKQMLEVMKNSDYEKMVLEVMKSVPYRQQVMNLIQESMQSPLFKTQLISLMKKAVEQQEQPMQQKTEGGKEKEGKGGEGKDQGKKKDKEQSSGKEEGKDSSGDSDSESDTDSNKKKKKKDDENQ
>NZ_CP019655.1|WP_077996257.1|4191187_4192249_-|Mrp/NBP35-family-ATP-binding-protein
MTREEVLEALQDLVDPHYGKSIVELGGIKDVVIKGQTVALTCVLSKDEGVNKDKLKQDITEVLTRKEIEQVHIRFRVMTDFERAQLGQQAGTPSAGSKPVSLLSPSSKVQFIAVASGKGGVGKSTVTVNLAASLSRLGKKVGIMDADIYGFSVPDMMGIEEQPRLENDHIIPVERHGVKVISMGFFVQDNAPVIWRGPMLGKMLRNFFNEVNWGDLDYMLLDLPPGTGDVALDVHQLLPGCKEIIVTTPHATAAYVAARAGAMALHTDHEIIGVVENMSYYSCSKCGNKDYIFGRGGGGKLAEELHTKLLAQIPLGAPDNHVAEPDYSPSVFKESTETGQLYLELARKVLEKL
>NZ_CP019655.1|WP_036655469.1|4192301_4193057_-|N-acetylmuramoyl-L-alanine-amidase-CwlD
MPKKRKRLVVWLTFQSGLKIVFSAILVALLVMIYAYKLPATETWTEWTQPLAGKTIALDAGHGGPDGGASSKSGVIEKDINLIISLYVRDYLQQAGAIVVMTREMDKDLANPDTKGYSKRKTEDLLKRAEFVIQKKADLFLSIHLNSVPSPKWRGAQAFYYPNNQDNYRLASLIQEEIKRNMENTDRVAKQEESVYLLKTLKMPSTLIELGFLSNPDEARMLADDKYQKKLAASIYQGILRYYAGEKVSTS
>NZ_CP019655.1|WP_079940469.1|4193149_4194328_-|sulfate-adenylyltransferase
MTESIAPHGGRLVNRFPDKRDRDRLLKHAESLPQIQLNAWSLSDLELIGIGAFSPLQGFMNERDYLSVLNSMRLEDGTVWSLPITLPLSAKEQAYIRVGTEAALIGEDKHIYGIIQVDSLYDIDPVFEAIQVFKTRDEAHPGVARLMAKSYTYAGGTIQLLRRTQPEQFADYYFDPAETREQFRQRGWKTVVGFQTRNPVHRAHEYIQKSAMEIVDGLFLNPLVGQTKSDDISAEVRMKSYHTLLVHYYPEDRVFLGVFPAAMRYAGPREAIFHALVRKNYGCTHFIVGRDHAGVGDYYSTYEAQDIFRRFTSEEIGIIPLFFEHSFYCTACGNMASSKTCPHDSSKHLHLSGTKVRALLRKGQCPPPQFTRPEVAKVLIGGMKEQVSPINS
>NZ_CP019655.1|WP_077996258.1|4194346_4195048_-|phosphoadenylyl-sulfate-reductase
MNLPEKEVLLSQISQEYEQKSAEELVVKAVETFPHIIFACSFGAEDVVLVDIMQKVAPSIDIFYLDTHVHFKETYLTKDRLQEKYNIEFIQVEPKISLAEQADRFGEELWKSDPNSCCNIRKVEPLSRILSEYDAWITGIRRDQAPTRANAPKAAYDTKFDLAKFNPLANWTSDDVWDYIREYELIYNPLHDQNYPSIGCEYCTRQVLPGEDLRAGRWSGFGKTECGLHQPQT
>NZ_CP019655.1|WP_077996259.1|4195766_4197032_-|hypothetical-protein
MATKWLKSLVLSGALVTVGLIASNTTAHAAVPDGVKVQINNHLVNFSDAMPYLNQGSLMVPMRAVAENLGYKLEFEMVQNGTQVRVKLIGDGHVFEFESGKQKAKVDNRSVTLDEVPVIKNDRVYVHIRSIGEHFGHIVQWDMNNNIGILGADGKYHAPAWYKPAKRTTPSKDVTLSAKKSNKSAGKQHTEKSVDKQVKPATSKDVTLSAKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPADKQVKSATSKDVTSSVKKSNESAGKQHTEKPAHKQVEPATSKDVTSTDKKSIVSKATRQIGVPYLWGGTSPNGFDCSGLVTYIFKQQGINLPRTSSGMYGVGTSVSNPEQGDLVFFADGGKVFHVGIYVGGNQFISATDDGVKIDSLGNRYWNKFYIGAKKVI
>NZ_CP019655.1|WP_023482142.1|4197679_4198072_-|30S-ribosomal-protein-S9
MAQVQYYGTGRRKHSVARVRLVPGEGRIIINKRDLNDYFGHETLKLIVKQPLALTETLNKYDVIVLAHGGGMSGQAGAIRHGISRALLKADPESRGSLKRAGFLTRDPRMKERKKYGLKAARRAPQFSKR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019655_1	1.1\|181406\|56\|NZ_CP019655\|CRISPRCasFinder	181406-181461	56	NZ_CP019655.1	15225-15280	0	1.0
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019658.1	22730-22762	0	1.0
NZ_CP019655_4	4.19\|1975627\|34\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975627-1975660	34	NZ_CP019656.1	21610-21643	0	1.0
NZ_CP019655_4	4.25\|1976028\|34\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1976028-1976061	34	NZ_CP019656.1	10194-10227	0	1.0
NZ_CP019655_5	5.6\|1977169\|38\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977169-1977206	38	NZ_CP019656.1	31939-31976	0	1.0
NZ_CP019655_9	9.7\|3740919\|36\|NZ_CP019655\|CRISPRCasFinder,CRT	3740919-3740954	36	NZ_CP019655.1	2068269-2068304	0	1.0
NZ_CP019655_10	10.1\|4182367\|54\|NZ_CP019655\|CRISPRCasFinder	4182367-4182420	54	NZ_CP019655.1	15225-15278	0	1.0
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	NZ_CP019656.1	9366-9401	1	0.972
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NZ_CP019655.1	3416299-3416328	1	0.967
NZ_CP019655_3	3.11\|1576492\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576492-1576527	36	NZ_CP019656.1	37644-37679	2	0.944
NZ_CP019655_3	3.18\|1576962\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019658.1	20717-20750	2	0.941

1. spacer 1.1|181406|56|NZ_CP019655|CRISPRCasFinder matches to position: 15225-15280, mismatch: 0, identity: 1.0

cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	CRISPR spacer
cgcttcgaaaaatccgatctgaatgggccatattttgctttgcaaaaatggtagtc	Protospacer
********************************************************

2. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 22730-22762, mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

3. spacer 4.19|1975627|34|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 21610-21643, mismatch: 0, identity: 1.0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

4. spacer 4.25|1976028|34|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 10194-10227, mismatch: 0, identity: 1.0

ttcttccgttttgggccaatgtggatagtctgct	CRISPR spacer
ttcttccgttttgggccaatgtggatagtctgct	Protospacer
**********************************

5. spacer 5.6|1977169|38|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 31939-31976, mismatch: 0, identity: 1.0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************

6. spacer 9.7|3740919|36|NZ_CP019655|CRISPRCasFinder,CRT matches to position: 2068269-2068304, mismatch: 0, identity: 1.0

ttgacgattaaatcaaaatcagacggatatccgaca	CRISPR spacer
ttgacgattaaatcaaaatcagacggatatccgaca	Protospacer
************************************

7. spacer 10.1|4182367|54|NZ_CP019655|CRISPRCasFinder matches to position: 15225-15278, mismatch: 0, identity: 1.0

ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	CRISPR spacer
ctaccatttttgcaaagcaaaatatggcccattcagatcggatttttcgaagcg	Protospacer
******************************************************

8. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to position: 9366-9401, mismatch: 1, identity: 0.972

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

9. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to position: 3416299-3416328, mismatch: 1, identity: 0.967

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

10. spacer 3.11|1576492|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 37644-37679, mismatch: 2, identity: 0.944

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

11. spacer 3.18|1576962|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to position: 20717-20750, mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019655_3	3.4\|1576017\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MH431930	Paenibacillus phage Wanderer, complete genome	13687-13722	0	1.0
NZ_CP019655_3	3.4\|1576017\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MG727697	Paenibacillus phage Dragolir, complete genome	13687-13722	0	1.0
NZ_CP019655_3	3.4\|1576017\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576017-1576052	36	MH454081	Paenibacillus phage LincolnB, complete genome	13686-13721	0	1.0
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	28144-28176	0	1.0
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	21771-21803	0	1.0
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	22729-22761	0	1.0
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	22730-22762	0	1.0
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	MH431930	Paenibacillus phage Wanderer, complete genome	23452-23488	0	1.0
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	MH454081	Paenibacillus phage LincolnB, complete genome	23442-23478	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431934	Paenibacillus phage Gryphonian, complete genome	35354-35386	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727696	Paenibacillus phage Kiel007, complete genome	35344-35376	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454082	Paenibacillus phage Genki, complete genome	35353-35385	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296793	Bacteriophage Rani, complete genome	35348-35380	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727701	Paenibacillus phage Leyra, complete genome	37355-37387	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431937	Paenibacillus phage Lucielle, complete genome	35306-35338	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454077	Paenibacillus phage Bloom, complete genome	35332-35364	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454083	Paenibacillus phage Saudage, complete genome	35321-35353	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296794	Bacteriophage Redbud, complete genome	35330-35362	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431933	Paenibacillus phage DevRi, complete genome	35333-35365	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048689	Paenibacillus phage PBL1c, complete genome	35717-35749	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727700	Paenibacillus phage Tadhana, complete genome	35242-35274	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP296795	Bacteriophage Shelly, complete genome	36231-36263	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_028788	Bacteriophage Diva, complete genome	34605-34637	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431932	Paenibacillus phage Arcticfreeze, complete genome	35331-35363	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361652	Paenibacillus phage Xenia, complete genome	36228-36260	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431935	Paenibacillus phage Honeybear, complete genome	37416-37448	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048717	Paenibacillus phage Eltigre, complete genome	36034-36066	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KF010834	Paenibacillus phage phiIBB_Pl23, complete genome	38598-38630	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048688	Paenibacillus phage BN12, complete genome	36847-36879	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361650	Paenibacillus phage Willow, complete genome	35352-35384	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048718	Paenibacillus phage Jacopo, complete genome	35339-35371	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH454084	Paenibacillus phage Toothless, complete genome	36194-36226	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KT361649	Paenibacillus phage Fern, complete genome	35353-35385	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048714	Paenibacillus phage Yerffej, complete genome	40485-40517	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	KP202972	Paenibacillus phage HB10c2, complete genome	33015-33047	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MG727702	Paenibacillus phage Likha, complete genome	34857-34889	0	1.0
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	NC_048690	Paenibacillus phage Pagassa, complete genome	37394-37426	0	1.0
NZ_CP019655_4	4.11\|1975088\|35\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975088-1975122	35	MH431936	Paenibacillus phage Kawika, complete genome	33925-33959	0	1.0
NZ_CP019655_4	4.13\|1975224\|33\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975224-1975256	33	NC_023147	Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence	4577-4609	0	1.0
NZ_CP019655_4	4.13\|1975224\|33\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975224-1975256	33	NZ_CP019654	Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence	7640-7672	0	1.0
NZ_CP019655_4	4.19\|1975627\|34\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975627-1975660	34	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	21610-21643	0	1.0
NZ_CP019655_4	4.24\|1975960\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	37058-37093	0	1.0
NZ_CP019655_4	4.24\|1975960\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	MK533143	Paenibacillus phage vB_PlaP_API480, complete genome	35356-35391	0	1.0
NZ_CP019655_4	4.25\|1976028\|34\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1976028-1976061	34	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	10194-10227	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431934	Paenibacillus phage Gryphonian, complete genome	35354-35383	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MG727696	Paenibacillus phage Kiel007, complete genome	35344-35373	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH454082	Paenibacillus phage Genki, complete genome	35353-35382	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KP296793	Bacteriophage Rani, complete genome	35348-35377	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MG727701	Paenibacillus phage Leyra, complete genome	37355-37384	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431937	Paenibacillus phage Lucielle, complete genome	35306-35335	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH454077	Paenibacillus phage Bloom, complete genome	35332-35361	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH454083	Paenibacillus phage Saudage, complete genome	35321-35350	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KP296794	Bacteriophage Redbud, complete genome	35330-35359	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431933	Paenibacillus phage DevRi, complete genome	35333-35362	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048689	Paenibacillus phage PBL1c, complete genome	35717-35746	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MG727700	Paenibacillus phage Tadhana, complete genome	35242-35271	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KP296795	Bacteriophage Shelly, complete genome	36231-36260	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_028788	Bacteriophage Diva, complete genome	34605-34634	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431932	Paenibacillus phage Arcticfreeze, complete genome	35331-35360	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KT361652	Paenibacillus phage Xenia, complete genome	36228-36257	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431935	Paenibacillus phage Honeybear, complete genome	37416-37445	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048717	Paenibacillus phage Eltigre, complete genome	36034-36063	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KF010834	Paenibacillus phage phiIBB_Pl23, complete genome	38598-38627	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048688	Paenibacillus phage BN12, complete genome	36847-36876	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KT361650	Paenibacillus phage Willow, complete genome	35352-35381	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048718	Paenibacillus phage Jacopo, complete genome	35339-35368	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH454084	Paenibacillus phage Toothless, complete genome	36194-36223	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KT361649	Paenibacillus phage Fern, complete genome	35353-35382	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048714	Paenibacillus phage Yerffej, complete genome	40485-40514	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	KP202972	Paenibacillus phage HB10c2, complete genome	33015-33044	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MG727702	Paenibacillus phage Likha, complete genome	34857-34886	0	1.0
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_048690	Paenibacillus phage Pagassa, complete genome	37394-37423	0	1.0
NZ_CP019655_5	5.1\|1976838\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1976838-1976872	35	MH431930	Paenibacillus phage Wanderer, complete genome	30312-30346	0	1.0
NZ_CP019655_5	5.1\|1976838\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1976838-1976872	35	MH454081	Paenibacillus phage LincolnB, complete genome	30302-30336	0	1.0
NZ_CP019655_5	5.6\|1977169\|38\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977169-1977206	38	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	31939-31976	0	1.0
NZ_CP019655_5	5.7\|1977239\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1977239-1977273	35	KP296792	Bacteriophage Lily, complete genome	28044-28078	0	1.0
NZ_CP019655_6	6.12\|2047157\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047157-2047191	35	KT361653	Paenibacillus phage Paisley, complete genome	27234-27268	0	1.0
NZ_CP019655_6	6.12\|2047157\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047157-2047191	35	NC_028746	Paenibacillus phage Harrison, complete genome	27236-27270	0	1.0
NZ_CP019655_7	7.6\|2060756\|38\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060756-2060793	38	MH431930	Paenibacillus phage Wanderer, complete genome	35753-35790	0	1.0
NZ_CP019655_7	7.6\|2060756\|38\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060756-2060793	38	MH454081	Paenibacillus phage LincolnB, complete genome	35743-35780	0	1.0
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	KP296792	Bacteriophage Lily, complete genome	44282-44335	0	1.0
NZ_CP019655_3	3.22\|1577230\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577230-1577265	36	NZ_CP019718	Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence	27880-27915	1	0.972
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	9366-9401	1	0.972
NZ_CP019655_4	4.20\|1975693\|35\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975693-1975727	35	MH431936	Paenibacillus phage Kawika, complete genome	33733-33767	1	0.971
NZ_CP019655_4	4.24\|1975960\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55877-55912	1	0.972
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	MH431936	Paenibacillus phage Kawika, complete genome	37072-37101	1	0.967
NZ_CP019655_6	6.1\|2046421\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MH431930	Paenibacillus phage Wanderer, complete genome	30369-30401	1	0.97
NZ_CP019655_6	6.1\|2046421\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MH454081	Paenibacillus phage LincolnB, complete genome	30359-30391	1	0.97
NZ_CP019655_7	7.3\|2060547\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060547-2060582	36	MH431930	Paenibacillus phage Wanderer, complete genome	29077-29112	1	0.972
NZ_CP019655_7	7.3\|2060547\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060547-2060582	36	MH454081	Paenibacillus phage LincolnB, complete genome	29067-29102	1	0.972
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431934	Paenibacillus phage Gryphonian, complete genome	37216-37269	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH454082	Paenibacillus phage Genki, complete genome	37215-37268	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MG727701	Paenibacillus phage Leyra, complete genome	40951-41004	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH454077	Paenibacillus phage Bloom, complete genome	37194-37247	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431933	Paenibacillus phage DevRi, complete genome	37195-37248	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	NC_048689	Paenibacillus phage PBL1c, complete genome	39313-39366	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	KP296795	Bacteriophage Shelly, complete genome	39827-39880	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431932	Paenibacillus phage Arcticfreeze, complete genome	37193-37246	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	KT361652	Paenibacillus phage Xenia, complete genome	39824-39877	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MH431936	Paenibacillus phage Kawika, complete genome	39351-39404	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	NC_048718	Paenibacillus phage Jacopo, complete genome	37201-37254	1	0.981
NZ_CP019655_8	8.1\|3453388\|54\|NZ_CP019655\|CRISPRCasFinder	3453388-3453441	54	MG727702	Paenibacillus phage Likha, complete genome	38453-38506	1	0.981
NZ_CP019655_3	3.11\|1576492\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576492-1576527	36	NZ_CP019656	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence	37644-37679	2	0.944
NZ_CP019655_3	3.12\|1576560\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460826	Paenibacillus phage Heath, complete genome	36350-36383	2	0.941
NZ_CP019655_3	3.12\|1576560\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460825	Paenibacillus phage Scottie, complete genome	36780-36813	2	0.941
NZ_CP019655_3	3.12\|1576560\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576560-1576593	34	MH460827	Paenibacillus phage Halcyone, complete genome	36350-36383	2	0.941
NZ_CP019655_3	3.18\|1576962\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP020329	Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence	26131-26164	2	0.941
NZ_CP019655_3	3.18\|1576962\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019796	Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence	19759-19792	2	0.941
NZ_CP019655_3	3.18\|1576962\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019661	Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence	20716-20749	2	0.941
NZ_CP019655_3	3.18\|1576962\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576962-1576995	34	NZ_CP019658	Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence	20717-20750	2	0.941
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361655	Paenibacillus phage Hayley, complete genome	26955-26991	2	0.946
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361656	Paenibacillus phage Vadim, complete genome	28352-28388	2	0.946
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	NC_028767	Paenibacillus phage Vegas, complete genome	28352-28388	2	0.946
NZ_CP019655_3	3.25\|1577436\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577436-1577472	37	KT361657	Paenibacillus phage Diane, complete genome	28352-28388	2	0.946
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	MH431936	Paenibacillus phage Kawika, complete genome	37072-37104	2	0.939
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	MH431937	Paenibacillus phage Lucielle, complete genome	33110-33145	2	0.944
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	MH454083	Paenibacillus phage Saudage, complete genome	33125-33160	2	0.944
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	NC_048689	Paenibacillus phage PBL1c, complete genome	33097-33132	2	0.944
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	KT361650	Paenibacillus phage Willow, complete genome	33156-33191	2	0.944
NZ_CP019655_4	4.10\|1975020\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975020-1975055	36	KT361649	Paenibacillus phage Fern, complete genome	33157-33192	2	0.944
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	CP019719	Paenibacillus phage phiERICV, complete genome	13992-14021	2	0.933
NZ_CP019655_6	6.2\|2046486\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MH431930	Paenibacillus phage Wanderer, complete genome	5369-5403	2	0.943
NZ_CP019655_6	6.2\|2046486\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MG727697	Paenibacillus phage Dragolir, complete genome	5369-5403	2	0.943
NZ_CP019655_6	6.2\|2046486\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046486-2046520	35	MH454081	Paenibacillus phage LincolnB, complete genome	5369-5403	2	0.943
NZ_CP019655_3	3.19\|1577028\|37\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1577028-1577064	37	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	64947-64983	3	0.919
NZ_CP019655_4	4.7\|1974818\|33\|NZ_CP019655\|CRISPRCasFinder,CRT	1974818-1974850	33	CP019719	Paenibacillus phage phiERICV, complete genome	13992-14024	3	0.909
NZ_CP019655_4	4.17\|1975489\|35\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975489-1975523	35	MH460825	Paenibacillus phage Scottie, complete genome	19033-19067	3	0.914
NZ_CP019655_4	4.20\|1975693\|35\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975693-1975727	35	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	55797-55831	3	0.914
NZ_CP019655_4	4.24\|1975960\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	KT361653	Paenibacillus phage Paisley, complete genome	40746-40781	3	0.917
NZ_CP019655_4	4.24\|1975960\|36\|NZ_CP019655\|CRISPRCasFinder,CRT,PILER-CR	1975960-1975995	36	NC_028746	Paenibacillus phage Harrison, complete genome	40823-40858	3	0.917
NZ_CP019655_6	6.3\|2046553\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH454080	Paenibacillus phage Ley, complete genome	36872-36907	3	0.917
NZ_CP019655_6	6.3\|2046553\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH454076	Paenibacillus phage Ash, complete genome	36872-36907	3	0.917
NZ_CP019655_6	6.3\|2046553\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	MH431938	Paenibacillus phage C7Cdelta, complete genome	36823-36858	3	0.917
NZ_CP019655_6	6.3\|2046553\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046553-2046588	36	KT755656	Paenibacillus phage Tripp, complete genome	37811-37846	3	0.917
NZ_CP019655_6	6.15\|2047361\|32\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2047361-2047392	32	MH460825	Paenibacillus phage Scottie, complete genome	19723-19754	3	0.906
NZ_CP019655_4	4.27\|1974754\|32\|NZ_CP019655\|PILER-CR	1974754-1974785	32	MK448796	Streptococcus phage Javan53, complete genome	29557-29588	6	0.812
NZ_CP019655_3	3.17\|1576897\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576897-1576929	33	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	123252-123284	7	0.788
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NZ_CP019703	Agrobacterium rhizogenes strain K599 (NCPPB2659) plasmid pRi2659, complete sequence	135091-135120	7	0.767
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NC_002575	Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence	12949-12978	7	0.767
NZ_CP019655_4	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	NZ_KY000038	Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence	62647-62676	7	0.767
NZ_CP019655_6	6.1\|2046421\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046421-2046453	33	MT900488	Streptococcus phage SA01, complete genome	966-998	8	0.758
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019069	Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome	53483-53516	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	NC_031900	Synechococcus phage S-CAM4 isolate 0809SB33, complete genome	53483-53516	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019156	Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome	58387-58420	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019054	Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome	58482-58515	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KU686202	Synechococcus phage S-CAM4 isolate 1010NB23, complete genome	53544-53577	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KU686200	Synechococcus phage S-CAM4 isolate 0309CC44, complete genome	53477-53510	8	0.765
NZ_CP019655_6	6.7\|2046820\|34\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046820-2046853	34	KJ019089	Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome	58938-58971	8	0.765
NZ_CP019655_7	7.10\|2061030\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2061030-2061062	33	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	90443-90475	8	0.758
NZ_CP019655_7	7.10\|2061030\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2061030-2061062	33	NZ_CP030176	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence	4286-4318	8	0.758
NZ_CP019655_3	3.6\|1576152\|39\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	1576152-1576190	39	MH399772	Mycobacterium phage Constella, complete genome	61268-61306	9	0.769
NZ_CP019655_6	6.4\|2046621\|33\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046621-2046653	33	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	141217-141249	9	0.727
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MG727696	Paenibacillus phage Kiel007, complete genome	33490-33525	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296793	Bacteriophage Rani, complete genome	33494-33529	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296794	Bacteriophage Redbud, complete genome	33476-33511	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MG727700	Paenibacillus phage Tadhana, complete genome	33388-33423	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_028788	Bacteriophage Diva, complete genome	32751-32786	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MH431935	Paenibacillus phage Honeybear, complete genome	35562-35597	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_048688	Paenibacillus phage BN12, complete genome	34993-35028	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP296796	Bacteriophage Sitara, complete genome	37668-37703	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	MH454084	Paenibacillus phage Toothless, complete genome	34340-34375	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	KP202972	Paenibacillus phage HB10c2, complete genome	31161-31196	9	0.75
NZ_CP019655_6	6.8\|2046886\|36\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2046886-2046921	36	NC_048690	Paenibacillus phage Pagassa, complete genome	35540-35575	9	0.75
NZ_CP019655_7	7.1\|2060412\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	114336-114370	9	0.743
NZ_CP019655_7	7.1\|2060412\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	114564-114598	9	0.743
NZ_CP019655_7	7.1\|2060412\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	31142-31176	10	0.714
NZ_CP019655_7	7.1\|2060412\|35\|NZ_CP019655\|PILER-CR,CRISPRCasFinder,CRT	2060412-2060446	35	KU160495	Exiguobacterium phage vB_EauS-123, complete genome	30779-30813	10	0.714
NZ_CP019655_4	4.4\|1974618\|35\|NZ_CP019655\|CRISPRCasFinder,CRT	1974618-1974652	35	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	58032-58066	12	0.657

1. spacer 3.4|1576017|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

2. spacer 3.4|1576017|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

3. spacer 3.4|1576017|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

gagagattctacccgttttacttccgacagcttttc	CRISPR spacer
gagagattctacccgttttacttccgacagcttttc	Protospacer
************************************

4. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

5. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

6. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

7. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
gctaatggaaaacaaagagaatcatatatcaaa	Protospacer
*********************************

8. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

9. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
atccggtgcatcagagattggctcaactgtatttcaa	Protospacer
*************************************

10. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

11. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

12. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

13. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

14. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

15. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

16. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

17. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

18. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

19. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

20. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

21. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

22. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

23. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

24. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

25. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

26. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

27. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048717 (Paenibacillus phage Eltigre, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

28. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KF010834 (Paenibacillus phage phiIBB_Pl23, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

29. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

30. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

31. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

32. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

33. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

34. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

35. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

36. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

37. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 0, identity: 1.0

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
acttctttttcttcaaaggtgaccgttttgaaa	Protospacer
*********************************

38. spacer 4.11|1975088|35|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 0, identity: 1.0

tccctaccaaaaggagggtaggattagtggaagtt	CRISPR spacer
tccctaccaaaaggagggtaggattagtggaagtt	Protospacer
***********************************

39. spacer 4.13|1975224|33|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_023147 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid pPLA2_10, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

40. spacer 4.13|1975224|33|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019654 (Paenibacillus larvae subsp. larvae DSM 25430 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atcttgattaagatacaaactatcaattgtgta	CRISPR spacer
atcttgattaagatacaaactatcaattgtgta	Protospacer
*********************************

41. spacer 4.19|1975627|34|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atacggcaatgaatatgggcctcaacaagttcta	CRISPR spacer
atacggcaatgaatatgggcctcaacaagttcta	Protospacer
**********************************

42. spacer 4.24|1975960|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

43. spacer 4.24|1975960|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MK533143 (Paenibacillus phage vB_PlaP_API480, complete genome) position: , mismatch: 0, identity: 1.0

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaaatagacgaataaagg	Protospacer
************************************

44. spacer 4.25|1976028|34|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttccgttttgggccaatgtggatagtctgct	CRISPR spacer
ttcttccgttttgggccaatgtggatagtctgct	Protospacer
**********************************

45. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

46. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

47. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

48. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

49. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

50. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

51. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

52. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

53. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

54. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

55. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

56. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

57. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

58. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

59. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

60. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

61. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

62. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048717 (Paenibacillus phage Eltigre, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

63. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KF010834 (Paenibacillus phage phiIBB_Pl23, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

64. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

65. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

66. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

67. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

68. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

69. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048714 (Paenibacillus phage Yerffej, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

70. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

71. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

72. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 0, identity: 1.0

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttgaaa	Protospacer
******************************

73. spacer 5.1|1976838|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

74. spacer 5.1|1976838|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

cagaagtaccccttgggacatatgatgtgaagatt	CRISPR spacer
cagaagtaccccttgggacatatgatgtgaagatt	Protospacer
***********************************

75. spacer 5.6|1977169|38|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaatatgggatcgataaatttggagcgaattgataa	CRISPR spacer
gtcaatatgggatcgataaatttggagcgaattgataa	Protospacer
**************************************

76. spacer 5.7|1977239|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

gaatttgtaaaagttctacaagatgaagatattac	CRISPR spacer
gaatttgtaaaagttctacaagatgaagatattac	Protospacer
***********************************

77. spacer 6.12|2047157|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

78. spacer 6.12|2047157|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 0, identity: 1.0

aatcaattcagatttagagtgaaataggtcctcaa	CRISPR spacer
aatcaattcagatttagagtgaaataggtcctcaa	Protospacer
***********************************

79. spacer 7.6|2060756|38|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

80. spacer 7.6|2060756|38|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 0, identity: 1.0

tattatttgcgtcaaagcagcatgtaactcttcggccc	CRISPR spacer
tattatttgcgtcaaagcagcatgtaactcttcggccc	Protospacer
**************************************

81. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to KP296792 (Bacteriophage Lily, complete genome) position: , mismatch: 0, identity: 1.0

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	Protospacer
******************************************************

82. spacer 3.22|1577230|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

taattcaagtgatacgaccatagccgcattgatgta	CRISPR spacer
taattcaagtgatacgaccatagccgcattgatata	Protospacer
*********************************.**

83. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgcaattgattaacatgtttgat	Protospacer
***************.********************

84. spacer 4.20|1975693|35|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.971

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
gctgaactcaatatccatatctggagataactctt	Protospacer
*********.*************************

85. spacer 4.24|1975960|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 1, identity: 0.972

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataaagg	Protospacer
*********************.**************

86. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.967

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tccttttcttcaaaggtgaccgttttgaaa	Protospacer
**.***************************

87. spacer 6.1|2046421|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

88. spacer 6.1|2046421|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.97

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ccaagtctggtaaaccaatgttgacttgctgga	Protospacer
*************************.*******

89. spacer 7.3|2060547|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

90. spacer 7.3|2060547|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 1, identity: 0.972

tggaattctattagcgaaatccagtcaacgagcatt	CRISPR spacer
tggaattctattagcgaaatccagtcaacgagcagt	Protospacer
********************************** *

91. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH431934 (Paenibacillus phage Gryphonian, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

92. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH454082 (Paenibacillus phage Genki, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

93. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MG727701 (Paenibacillus phage Leyra, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

94. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH454077 (Paenibacillus phage Bloom, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

95. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH431933 (Paenibacillus phage DevRi, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

96. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

97. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to KP296795 (Bacteriophage Shelly, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

98. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH431932 (Paenibacillus phage Arcticfreeze, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

99. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to KT361652 (Paenibacillus phage Xenia, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

100. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

101. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to NC_048718 (Paenibacillus phage Jacopo, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

102. spacer 8.1|3453388|54|NZ_CP019655|CRISPRCasFinder matches to MG727702 (Paenibacillus phage Likha, complete genome) position: , mismatch: 1, identity: 0.981

ttaccccaaacatttttgataggctctaatcccctgatatataagggtttaagg	CRISPR spacer
ttaccccaaacatttttgataggctctaatcccttgatatataagggtttaagg	Protospacer
*********************************.********************

103. spacer 3.11|1576492|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019656 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ttttaatatcgcattgcctaatcgcgttttaagatc	CRISPR spacer
ttttaaaatcgcatttcctaatcgcgttttaagatc	Protospacer
****** ******** ********************

104. spacer 3.12|1576560|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460826 (Paenibacillus phage Heath, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

105. spacer 3.12|1576560|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

106. spacer 3.12|1576560|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460827 (Paenibacillus phage Halcyone, complete genome) position: , mismatch: 2, identity: 0.941

tcaagctcggcgacctcggctctgcgttggtcta	CRISPR spacer
tcaagctcggtgacctcggctttgcgttggtcta	Protospacer
**********.**********.************

107. spacer 3.18|1576962|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020329 (Paenibacillus larvae subsp. pulvifaciens strain CCM 38 plasmid pPLP2.1, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

108. spacer 3.18|1576962|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019796 (Paenibacillus larvae subsp. pulvifaciens strain ATCC 13537 plasmid pPLP2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

109. spacer 3.18|1576962|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019661 (Paenibacillus larvae subsp. larvae strain Eric_IV plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

110. spacer 3.18|1576962|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019658 (Paenibacillus larvae subsp. larvae strain Eric_III plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.941

cttgaaaactcctgttttattgttcatcatggaa	CRISPR spacer
cttgatcactcctgttttattgttcatcatggaa	Protospacer
*****  ***************************

111. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361655 (Paenibacillus phage Hayley, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

112. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361656 (Paenibacillus phage Vadim, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

113. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028767 (Paenibacillus phage Vegas, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

114. spacer 3.25|1577436|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT361657 (Paenibacillus phage Diane, complete genome) position: , mismatch: 2, identity: 0.946

atccggtgcatcagagattggctcaactgtatttcaa	CRISPR spacer
acccagtgcatcagagattggctcaactgtatttcaa	Protospacer
*.**.********************************

115. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to MH431936 (Paenibacillus phage Kawika, complete genome) position: , mismatch: 2, identity: 0.939

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttccttttcttcaaaggtgaccgttttgaaa	Protospacer
.****.***************************

116. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH431937 (Paenibacillus phage Lucielle, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

117. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH454083 (Paenibacillus phage Saudage, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

118. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_048689 (Paenibacillus phage PBL1c, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

119. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361650 (Paenibacillus phage Willow, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

120. spacer 4.10|1975020|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361649 (Paenibacillus phage Fern, complete genome) position: , mismatch: 2, identity: 0.944

aatattaagaccatgtaattgattaacatgtttgat	CRISPR spacer
aatattaagaccatgtacttgattaacctgtttgat	Protospacer
***************** ********* ********

121. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to CP019719 (Paenibacillus phage phiERICV, complete genome) position: , mismatch: 2, identity: 0.933

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcctcaaaggtgatcgttttgaaa	Protospacer
********.**********.**********

122. spacer 6.2|2046486|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431930 (Paenibacillus phage Wanderer, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

123. spacer 6.2|2046486|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

124. spacer 6.2|2046486|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454081 (Paenibacillus phage LincolnB, complete genome) position: , mismatch: 2, identity: 0.943

ggacaactggacatatcaaaatgattgtagaattg	CRISPR spacer
ggacaactggacctatcaaaatgattgtagaatta	Protospacer
************ *********************.

125. spacer 3.19|1577028|37|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.919

tcgaagtaatcacttccagcccgggatatctttaggc	CRISPR spacer
ttgaagtaattactgccagcccgggatatctttaggc	Protospacer
*.********.*** **********************

126. spacer 4.7|1974818|33|NZ_CP019655|CRISPRCasFinder,CRT matches to CP019719 (Paenibacillus phage phiERICV, complete genome) position: , mismatch: 3, identity: 0.909

acttctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
gcttctttttcctcaaaggtgatcgttttgaaa	Protospacer
.**********.**********.**********

127. spacer 4.17|1975489|35|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.914

attttaattttccgttcccctcgtgttgttatcgt	CRISPR spacer
tttttaattttccgttcccctcgtgttgttatcta	Protospacer
 ********************************

128. spacer 4.20|1975693|35|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 3, identity: 0.914

gctgaactcgatatccatatctggagataactctt	CRISPR spacer
actgaactcaatatccatatctggtgataactctt	Protospacer
.********.************** **********

129. spacer 4.24|1975960|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

130. spacer 4.24|1975960|36|NZ_CP019655|CRISPRCasFinder,CRT,PILER-CR matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 3, identity: 0.917

atctctctatcatggaaaaaaatagacgaataaagg	CRISPR spacer
atctctctatcatggaaaaaagtagacgaataagga	Protospacer
*********************.***********.*.

131. spacer 6.3|2046553|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454080 (Paenibacillus phage Ley, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

132. spacer 6.3|2046553|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454076 (Paenibacillus phage Ash, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

133. spacer 6.3|2046553|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431938 (Paenibacillus phage C7Cdelta, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

134. spacer 6.3|2046553|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KT755656 (Paenibacillus phage Tripp, complete genome) position: , mismatch: 3, identity: 0.917

gcgaaacaccccaccgttaatttcacgcaatttccc	CRISPR spacer
gcgaaacaccccaccgttaatttcacgtaatttact	Protospacer
***************************.***** *.

135. spacer 6.15|2047361|32|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH460825 (Paenibacillus phage Scottie, complete genome) position: , mismatch: 3, identity: 0.906

taaaaaacgagatgccaacgggtcgcccggat	CRISPR spacer
ctaaaaacgagctgccaacgggtcgcccggat	Protospacer
. ********* ********************

136. spacer 4.27|1974754|32|NZ_CP019655|PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 6, identity: 0.812

-gatggagcaatataaacacgcaaccaattata	CRISPR spacer
ttatggaa-aatataaacacgcaaacaatcatt	Protospacer
  *****. *************** ****.**

137. spacer 3.17|1576897|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.788

gctaatggaaaacaaagagaatcatatatcaaa	CRISPR spacer
tttaatggaaaacaaagagaattataaagaaca	Protospacer
 .********************.*** *  * *

138. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NZ_CP019703 (Agrobacterium rhizogenes strain K599 (NCPPB2659) plasmid pRi2659, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

139. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NC_002575 (Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

140. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NZ_KY000038 (Agrobacterium rhizogenes strain 1724 plasmid pRi_1724, complete sequence) position: , mismatch: 7, identity: 0.767

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tcacaatcttcaaaggtcaacgttttgaat	Protospacer
** .  *********** * *********

141. spacer 6.1|2046421|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MT900488 (Streptococcus phage SA01, complete genome) position: , mismatch: 8, identity: 0.758

ccaagtctggtaaaccaatgttgacctgctgga	CRISPR spacer
ctaagtctggtaaacctatgatgaccagtacta	Protospacer
*.************** *** ***** *.   *

142. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019069 (Synechococcus phage ACG-2014j isolate Syn7803US103, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

143. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_031900 (Synechococcus phage S-CAM4 isolate 0809SB33, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

144. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

145. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattgaaga	Protospacer
*********.************ ***..   *.*

146. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU686202 (Synechococcus phage S-CAM4 isolate 1010NB23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

147. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU686200 (Synechococcus phage S-CAM4 isolate 0309CC44, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

148. spacer 6.7|2046820|34|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KJ019089 (Synechococcus phage ACG-2014j isolate Syn7803US23, complete genome) position: , mismatch: 8, identity: 0.765

ttgtgtaaaaaactgatttcgaatgagcgccaaa	CRISPR spacer
ttgtgtaaagaactgatttcgattgaattaaaga	Protospacer
*********.************ ***..   *.*

149. spacer 7.10|2061030|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
gcccatcaaatacaataataattacagcaatta	Protospacer
*   * ********* ********** ***  *

150. spacer 7.10|2061030|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030176 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence) position: , mismatch: 8, identity: 0.758

gaaaaacaaatacaaaaataattacaccaagaa	CRISPR spacer
tcaagacaaatacaaaaataataacattagcaa	Protospacer
  **.***************** ***..*. **

151. spacer 3.6|1576152|39|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH399772 (Mycobacterium phage Constella, complete genome) position: , mismatch: 9, identity: 0.769

acatacgttgagctattcgcgggcatcggaggatttcga	CRISPR spacer
acgcatgttgatctattcgcgggcatcggcggattctcg	Protospacer
**..*.***** ***************** *****.. .

152. spacer 6.4|2046621|33|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 9, identity: 0.727

agacggtacgttaatcgtaccaatgacaaggag	CRISPR spacer
acagacaacgttaatcgttccaatgccaaggtt	Protospacer
* * .  *********** ****** *****

153. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727696 (Paenibacillus phage Kiel007, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

154. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296793 (Bacteriophage Rani, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

155. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296794 (Bacteriophage Redbud, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

156. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MG727700 (Paenibacillus phage Tadhana, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

157. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_028788 (Bacteriophage Diva, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

158. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

159. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_048688 (Paenibacillus phage BN12, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

160. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP296796 (Bacteriophage Sitara, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

161. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to MH454084 (Paenibacillus phage Toothless, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

162. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KP202972 (Paenibacillus phage HB10c2, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

163. spacer 6.8|2046886|36|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 9, identity: 0.75

ctcatagattaaatcttccatgccaaacattttacg	CRISPR spacer
ttcgcaaattaaatcctccataccaaacatttttaa	Protospacer
.**..*.********.*****.***********  .

164. spacer 7.1|2060412|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

165. spacer 7.1|2060412|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.743

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tggagataattcttttaattcttttagtatatctg	Protospacer
 .**  *  ** ************* ********

166. spacer 7.1|2060412|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
tgcggcgatttgttttaattctttttgttcatcgt	Protospacer
 . . *  ******************** .*** *

167. spacer 7.1|2060412|35|NZ_CP019655|PILER-CR,CRISPRCasFinder,CRT matches to KU160495 (Exiguobacterium phage vB_EauS-123, complete genome) position: , mismatch: 10, identity: 0.714

aagatctttttgttttaattctttttgtatatctt	CRISPR spacer
caaatccttttgttttaaatctttttgtttcctca	Protospacer
 *.***.*********** ********* * ...

168. spacer 4.4|1974618|35|NZ_CP019655|CRISPRCasFinder,CRT matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 12, identity: 0.657

tcaacataattttgttttctaattaaaagtaaatc	CRISPR spacer
catacctaattatgttttctaattaaaatccgcgt	Protospacer
.  ** ***** **************** . .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

440872 : 512774

Paenibacillus_phage(47.83%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997612.1\|440872_442135_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.2e-87	42.3
WP_077996631.1\|442166_442868_+	protein rep	NA	NA	NA	NA
WP_024093087.1\|443822_445271_+	amino acid permease	NA	NA	NA	NA
WP_042119415.1\|445328_447191_+	tyrosine decarboxylase	NA	NA	NA	NA
WP_023483977.1\|447300_448116_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_079940500.1\|448207_449593_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_077996632.1\|449879_450176_+	transcriptional regulator	NA	NA	NA	NA
WP_077997613.1\|450485_451136_+	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_077996633.1\|451364_452180_+	N-acetylmuramoyl-L-alanine amidase	D6QWP2	uncultured_phage	1.7e-40	52.9
WP_077996634.1\|453744_454302_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.4e-38	43.4
WP_077996635.1\|454298_455258_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.6e-76	45.7
WP_036655890.1\|455254_456109_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_077996636.1\|456352_456934_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_149867746.1\|457224_457860_-	hypothetical protein	NA	NA	NA	NA
WP_077996638.1\|458035_458290_+\|transposase	transposase	NA	NA	NA	NA
WP_079940501.1\|458773_460138_+	hypothetical protein	NA	NA	NA	NA
WP_155121069.1\|460124_460301_+	hypothetical protein	NA	NA	NA	NA
WP_077996641.1\|460465_460972_+	hypothetical protein	NA	NA	NA	NA
WP_077996642.1\|460990_461317_+	hypothetical protein	NA	NA	NA	NA
WP_077996644.1\|462232_463114_+	hypothetical protein	NA	NA	NA	NA
WP_077996645.1\|463136_464069_+	type III-B CRISPR module RAMP protein Cmr1	NA	NA	NA	NA
WP_077996646.1\|464068_465742_+	type III-B CRISPR-associated protein Cas10/Cmr2	NA	NA	NA	NA
WP_079940503.1\|465741_466866_+	hypothetical protein	NA	NA	NA	NA
WP_077997614.1\|466879_467776_+	type III-B CRISPR module RAMP protein Cmr4	NA	NA	NA	NA
WP_042118428.1\|467759_468164_+	type III-B CRISPR module-associated protein Cmr5	NA	NA	NA	NA
WP_149867747.1\|468237_468996_+	type III-B CRISPR module RAMP protein Cmr6	NA	NA	NA	NA
WP_077996650.1\|470896_471568_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.6e-12	29.7
WP_077996651.1\|473698_474187_+	hypothetical protein	NA	NA	NA	NA
WP_077996653.1\|475638_476895_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
WP_077996654.1\|477062_478250_+	alanine racemase	NA	NA	NA	NA
WP_024093124.1\|478484_478766_+	CopG family ribbon-helix-helix protein	NA	NA	NA	NA
WP_023485406.1\|478769_479120_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A2P0ZKX3	Lactobacillus_phage	6.9e-15	38.6
WP_104932789.1\|479291_481496_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_077997616.1\|481697_482264_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_023485404.1\|482661_483120_+	hypothetical protein	NA	NA	NA	NA
WP_024093128.1\|483204_483432_+	hypothetical protein	NA	NA	NA	NA
WP_079940505.1\|483687_484887_+	S8 family peptidase	A0A217EQY2	Bacillus_phage	3.4e-45	38.8
WP_096761197.1\|485195_485303_-	cortex morphogenetic protein CmpA	NA	NA	NA	NA
WP_077996657.1\|485464_485821_-	hydrolase/acyltransferase	NA	NA	NA	NA
WP_077996658.1\|485919_486390_+	SprT family protein	NA	NA	NA	NA
WP_077996659.1\|488101_488866_-	hypothetical protein	NA	NA	NA	NA
WP_077996660.1\|489165_489756_+	hypothetical protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
WP_077996661.1\|489767_490058_+	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
WP_036655918.1\|490371_490608_+\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
WP_077996662.1\|491285_491531_+\|transposase	transposase	A0A2I7SC00	Paenibacillus_phage	2.2e-31	93.8
WP_149867748.1\|491891_492293_+	hypothetical protein	D2XR29	Bacillus_phage	3.3e-21	45.1
WP_158530383.1\|492279_492438_-	hypothetical protein	NA	NA	NA	NA
WP_104932633.1\|493016_493445_+	hypothetical protein	NA	NA	NA	NA
WP_077995397.1\|493451_494675_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_077996665.1\|495937_496621_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	6.9e-120	97.8
WP_079940506.1\|497549_498194_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_104932629.1\|498170_499288_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.1e-153	99.3
WP_079940507.1\|499312_500710_+	phosphatidylinositol-specific phospholipase C domain-containing protein	NA	NA	NA	NA
WP_036654509.1\|501071_501755_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932634.1\|501775_502645_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996666.1\|503230_504505_+	hypothetical protein	NA	NA	NA	NA
WP_079940508.1\|504575_507188_+	peptidase	A0A1V0E026	Clostridioides_phage	2.6e-98	33.4
WP_079940509.1\|507713_508319_+	ADP-ribosyltransferase	Q331X8	Clostridium_botulinum_C_phage	9.7e-33	41.8
WP_077996667.1\|508673_509645_+	hypothetical protein	A0A2I7SCU7	Paenibacillus_phage	2.9e-143	78.9
WP_077996668.1\|509704_510724_+	hypothetical protein	A0A2I7SDE4	Paenibacillus_phage	1.9e-60	61.5
WP_077996669.1\|510740_511148_+	hypothetical protein	NA	NA	NA	NA
WP_104932629.1\|511504_512621_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.1e-153	99.3
WP_104932635.1\|512675_512774_+	dihydroorotate dehydrogenase	A0A2I7SCT3	Paenibacillus_phage	2.3e-08	96.9

DBSCAN-SWA_2

596715 : 650602

Paenibacillus_phage(16.67%)

tRNA,transposase,holin,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996720.1\|596715_597051_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_079940518.1\|598008_599097_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_024095277.1\|599321_599867_+	peroxiredoxin	NA	NA	NA	NA
WP_077997624.1\|600014_600407_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_079940519.1\|600444_602415_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_024095275.1\|602461_602662_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_024095273.1\|602849_603275_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|603575_604259_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|604279_605149_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_023484880.1\|605255_606236_-	hypothetical protein	NA	NA	NA	NA
WP_077996722.1\|606433_607252_+	RNA polymerase sigma factor SigI	NA	NA	NA	NA
WP_077996723.1\|607244_608357_+	anti-sigma factor domain-containing protein	NA	NA	NA	NA
WP_079940520.1\|608569_609964_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_052337463.1\|610104_610644_-	hypothetical protein	NA	NA	NA	NA
WP_079940521.1\|611004_612471_-	glycine dehydrogenase subunit 2	E3ST28	Prochlorococcus_phage	1.8e-80	39.4
WP_077996726.1\|612467_613823_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	5.3e-55	38.1
WP_077996727.1\|613863_614970_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_024095265.1\|615586_615976_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_023484889.1\|616197_616632_+	universal stress protein	NA	NA	NA	NA
WP_077585182.1\|616931_617216_+	hypothetical protein	NA	NA	NA	NA
WP_077996728.1\|617245_618202_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.3e-121	64.0
WP_023484892.1\|618256_618742_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	1.1e-31	42.5
WP_077996729.1\|618810_619119_+	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_023484894.1\|619139_619340_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	6.3e-05	40.0
WP_079940522.1\|619434_621861_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.8e-115	38.0
WP_077997625.1\|621917_622541_-	YcnI family protein	NA	NA	NA	NA
WP_023484897.1\|622630_623308_-	response regulator transcription factor	NA	NA	NA	NA
WP_036657484.1\|623304_624111_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_036655989.1\|624400_624643_-	hypothetical protein	NA	NA	NA	NA
WP_077996732.1\|625366_625651_+	hypothetical protein	NA	NA	NA	NA
WP_077996733.1\|625823_627509_+	hypothetical protein	NA	NA	NA	NA
WP_077996734.1\|627818_628175_+	hypothetical protein	NA	NA	NA	NA
WP_077996735.1\|628401_629064_-	hypothetical protein	NA	NA	NA	NA
WP_077996736.1\|629377_629572_+	helix-turn-helix transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	8.0e-05	37.3
WP_024095256.1\|629971_630673_-	iron-sulfur cluster repair di-iron protein	NA	NA	NA	NA
WP_077996738.1\|631030_632263_+	FprA family A-type flavoprotein	NA	NA	NA	NA
WP_077996739.1\|632287_633526_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_024095255.1\|633663_633828_+	rubredoxin	NA	NA	NA	NA
WP_077996740.1\|633899_634607_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_077996741.1\|634882_635536_-	hypothetical protein	NA	NA	NA	NA
WP_077996742.1\|635652_636834_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_155121072.1\|637019_637184_+	hypothetical protein	NA	NA	NA	NA
WP_077996743.1\|637641_637764_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_158672712.1\|637730_638087_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.3e-12	42.2
WP_077996746.1\|638165_638483_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158672713.1\|638550_639387_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-47	39.5
WP_024095236.1\|639786_640710_-	aldo/keto reductase	NA	NA	NA	NA
WP_023483724.1\|640876_641392_+	signal peptidase I	NA	NA	NA	NA
WP_104932642.1\|641813_642011_+	PTS transporter subunit EIIB	NA	NA	NA	NA
WP_077996747.1\|642493_643522_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.7e-29	37.9
WP_079940523.1\|643545_645996_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_077996748.1\|646102_649003_+	hypothetical protein	NA	NA	NA	NA
WP_023483729.1\|649008_649548_+	CvpA family protein	NA	NA	NA	NA
WP_036656016.1\|649629_649992_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_023483731.1\|650233_650602_-\|holin	phage holin family protein	NA	NA	NA	NA

DBSCAN-SWA_3

763358 : 915053

164

Paenibacillus_phage(62.82%)

tail,holin,terminase,integrase,capsid,coat,head,protease,transposase,portal

attL 768543:768602|attR 858018:859739

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995397.1\|763358_764582_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_023485364.1\|766356_766728_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_023485363.1\|766804_768316_+	PAS domain S-box protein	NA	NA	NA	NA
WP_079940531.1\|768339_768564_+	hypothetical protein	NA	NA	NA	NA
768543:768602	attL	NA	NA	NA	NA
WP_036654509.1\|768611_769295_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|769315_770185_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996804.1\|770384_770801_-	hypothetical protein	NA	NA	NA	NA
WP_077996805.1\|771065_771377_+	DUF1805 domain-containing protein	NA	NA	NA	NA
WP_077996806.1\|771363_771729_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077996807.1\|771775_772417_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_077996808.1\|772552_773659_-	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA
WP_077996809.1\|773678_774908_-	S-methyl-5-thioribose kinase	NA	NA	NA	NA
WP_024093280.1\|775126_775576_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	8.5e-42	61.3
WP_077996810.1\|775747_776320_+	DUF1802 family protein	NA	NA	NA	NA
WP_077996811.1\|776500_777334_+	Fe-S cluster assembly ATPase SufC	W8CYL7	Bacillus_phage	2.2e-06	25.3
WP_024093282.1\|777401_778697_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_077996812.1\|778693_779920_+	cysteine desulfurase	Q2XUY6	environmental_halophage	2.5e-112	46.5
WP_023485352.1\|779906_780344_+	SUF system NifU family Fe-S cluster assembly protein	A0A218MKD1	uncultured_virus	1.1e-12	31.2
WP_023485351.1\|780368_781766_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_077997632.1\|781847_783014_-\|integrase	site-specific integrase	S5MBZ0	Brevibacillus_phage	3.6e-60	37.2
WP_077996813.1\|783096_783729_-	helix-turn-helix domain-containing protein	A0A1B2APZ3	Phage_Wrath	3.2e-79	67.6
WP_077996814.1\|783881_784130_+	helix-turn-helix transcriptional regulator	A0A1B2APZ4	Phage_Wrath	4.6e-21	68.0
WP_077997633.1\|784163_784436_+	group-specific protein	A0A1B1P7U4	Bacillus_phage	1.8e-23	57.1
WP_077996815.1\|784520_784775_+	hypothetical protein	A0A0C5AER7	Bacteriophage	1.3e-34	91.5
WP_077996816.1\|784771_785143_+	hypothetical protein	R9VW30	Paenibacillus_phage	8.5e-56	90.0
WP_077996817.1\|785139_785364_+	hypothetical protein	A0A0K2CZE0	Paenibacillus_phage	7.8e-20	72.5
WP_158672717.1\|785360_785531_+	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	8.2e-22	92.0
WP_077996818.1\|785535_785724_+	hypothetical protein	NA	NA	NA	NA
WP_077996819.1\|785720_786398_+	hypothetical protein	A0A2I7SCV5	Paenibacillus_phage	1.8e-59	84.5
WP_077996820.1\|786412_786676_+	hypothetical protein	A0A0C5AFB6	Paenibacillus_phage	5.7e-30	70.1
WP_155121034.1\|786854_787022_+	hypothetical protein	NA	NA	NA	NA
WP_077996822.1\|787963_788767_+	hypothetical protein	A0A0P0IZH9	Lactobacillus_phage	5.4e-47	40.0
WP_077996823.1\|788816_789218_+	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.9e-46	73.5
WP_077996824.1\|789242_789575_+	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	1.6e-53	92.7
WP_077996825.1\|789623_790514_+	DnaD domain protein	A0A0K2CY85	Paenibacillus_phage	2.7e-124	86.5
WP_104932794.1\|790404_791226_+	ATP-binding protein	A0A0K2CYY7	Paenibacillus_phage	3.0e-117	97.2
WP_077996826.1\|791343_791574_+	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	9.7e-34	98.6
WP_077996827.1\|791554_792076_+	hypothetical protein	R9TMF8	Paenibacillus_phage	1.5e-50	53.5
WP_077996828.1\|792257_792488_+	hypothetical protein	R9TMG2	Paenibacillus_phage	6.1e-20	66.2
WP_077996830.1\|793048_793417_+	hypothetical protein	R9W0Q6	Paenibacillus_phage	1.4e-13	77.3
WP_077996831.1\|793423_793657_+	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	1.7e-14	69.8
WP_158672718.1\|793649_794060_+	hypothetical protein	A8ASP1	Listeria_phage	8.9e-14	39.4
WP_077996833.1\|794049_794286_+	hypothetical protein	NA	NA	NA	NA
WP_077996834.1\|794313_794751_+	transcriptional regulator	A0A0K2CYZ6	Paenibacillus_phage	2.5e-70	95.9
WP_077996835.1\|794956_795298_+	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	8.4e-58	100.0
WP_077996836.1\|795308_796772_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-123	49.1
WP_104932795.1\|796913_797213_+	DUF3310 domain-containing protein	E5DV94	Deep-sea_thermophilic_phage	4.8e-09	42.9
WP_077996839.1\|797393_797708_+	hypothetical protein	A0A0K2CZ01	Paenibacillus_phage	8.3e-44	86.5
WP_077996840.1\|797694_798036_+	HNH endonuclease	A0A0K2CYS9	Paenibacillus_phage	4.4e-59	98.2
WP_077996841.1\|798170_798488_+\|terminase	phage terminase small subunit P27 family	A0A0C5AMZ2	Paenibacillus_phage	1.7e-44	89.5
WP_077996842.1\|798462_800196_+\|terminase	terminase large subunit	A0A0K2CZH9	Paenibacillus_phage	1.1e-214	63.5
WP_077996843.1\|800214_801474_+\|portal	phage portal protein	A0A0A7RUE7	Clostridium_phage	4.9e-18	22.9
WP_077996844.1\|801409_802012_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	7.7e-14	34.6
WP_158672719.1\|802023_803208_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_158672720.1\|803209_803506_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J6E5	uncultured_Caudovirales_phage	2.9e-14	40.7
WP_158672721.1\|803483_803801_+\|head	phage head closure protein	A0A0C5AE87	Paenibacillus_phage	2.2e-52	92.4
WP_077996848.1\|803800_804229_+	hypothetical protein	A0A0C5AJ13	Paenibacillus_phage	3.0e-68	94.4
WP_158672722.1\|804212_804608_+	DUF3168 domain-containing protein	A0A0C5AEH4	Paenibacillus_phage	9.1e-56	84.7
WP_077996850.1\|804609_805044_+\|tail	phage major tail protein, TP901-1 family	A0A2I7SCY9	Paenibacillus_phage	2.0e-72	95.8
WP_104932650.1\|805043_805382_+	hypothetical protein	A0A0C5ABB9	Paenibacillus_phage	1.5e-22	51.3
WP_158672723.1\|805414_805663_+	hypothetical protein	A0A0C5AE91	Paenibacillus_phage	4.7e-26	70.4
WP_077996853.1\|805717_808354_+\|tail	phage tail tape measure protein	A0A0C5AJ16	Paenibacillus_phage	8.0e-249	95.9
WP_158672724.1\|808350_809226_+\|tail	phage tail family protein	A0A0C5AEI0	Paenibacillus_phage	5.0e-70	46.0
WP_158672725.1\|809228_810359_+	hypothetical protein	A0A0K2CZQ1	Paenibacillus_phage	1.7e-59	33.8
WP_104932651.1\|810363_812331_+	hypothetical protein	E2ELJ8	Clostridium_phage	1.5e-53	48.7
WP_077996857.1\|812343_812529_+	hypothetical protein	NA	NA	NA	NA
WP_077996858.1\|812546_812729_+	hypothetical protein	NA	NA	NA	NA
WP_158672726.1\|812721_812877_+	hypothetical protein	NA	NA	NA	NA
WP_024094415.1\|812917_813157_+	hypothetical protein	R9W0N4	Paenibacillus_phage	2.8e-36	100.0
WP_077996859.1\|814100_814343_+\|transposase	transposase	A0A0C5AN23	Paenibacillus_phage	4.3e-32	93.8
WP_104932634.1\|815605_816475_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|816495_817179_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996871.1\|817632_817797_+	hypothetical protein	NA	NA	NA	NA
WP_077996872.1\|819089_819710_+	hypothetical protein	NA	NA	NA	NA
WP_158672727.1\|819849_821133_+	MFS transporter	D0R099	Streptococcus_phage	1.2e-08	22.5
WP_077996875.1\|822820_823453_+	hypothetical protein	NA	NA	NA	NA
WP_104932796.1\|823546_823693_+\|holin	putative holin-like toxin	A0A0K2CYN9	Paenibacillus_phage	2.8e-18	100.0
WP_077997637.1\|826321_827359_+	amidinotransferase	NA	NA	NA	NA
WP_077996877.1\|827785_827986_+	hypothetical protein	NA	NA	NA	NA
WP_158672728.1\|828548_828749_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.1e-12	52.4
WP_155121082.1\|828850_829024_+	hypothetical protein	A0A0C5AMZ7	Paenibacillus_phage	7.1e-13	90.7
WP_155121083.1\|829067_829241_+	hypothetical protein	A0A2I7SDE4	Paenibacillus_phage	8.3e-22	98.2
WP_077996880.1\|829468_829876_+	hypothetical protein	A0A2I7SDE8	Paenibacillus_phage	3.4e-66	94.0
WP_077995249.1\|830220_831441_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077996881.1\|832518_832707_-	hypothetical protein	A0A2I7SC09	Paenibacillus_phage	9.1e-22	78.7
WP_077996882.1\|833524_833929_-	hypothetical protein	NA	NA	NA	NA
WP_077996883.1\|833910_834207_-	hypothetical protein	NA	NA	NA	NA
WP_155121084.1\|834743_834908_-	hypothetical protein	NA	NA	NA	NA
WP_077996884.1\|835142_836078_+	hypothetical protein	NA	NA	NA	NA
WP_077996885.1\|836101_836491_+	hypothetical protein	NA	NA	NA	NA
WP_155121085.1\|836487_836625_+	hypothetical protein	NA	NA	NA	NA
WP_024093300.1\|837344_837671_+\|transposase	transposase	NA	NA	NA	NA
WP_024093303.1\|838416_839460_+	hypothetical protein	NA	NA	NA	NA
WP_077996887.1\|839479_839785_+	hypothetical protein	NA	NA	NA	NA
WP_158225766.1\|839815_839914_+	sporulation protein YjcZ	NA	NA	NA	NA
WP_023484376.1\|840147_840543_+	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_077996888.1\|840738_841785_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_036656196.1\|841863_842196_-	hypothetical protein	NA	NA	NA	NA
WP_158672729.1\|842388_843357_+	collagen-like repeat preface domain-containing protein	NA	NA	NA	NA
WP_079940534.1\|843541_844957_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_023484381.1\|845101_845953_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_077585292.1\|846340_847444_+	radical SAM/CxCxxxxC motif protein YfkAB	NA	NA	NA	NA
WP_077996890.1\|847496_848867_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_104932652.1\|849029_849893_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.8e-134	98.3
WP_077996122.1\|849915_850599_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
WP_077585196.1\|850779_850992_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_024093310.1\|851264_851531_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_040932682.1\|851572_852142_+	hypothetical protein	NA	NA	NA	NA
WP_077996892.1\|852534_852831_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	3.5e-12	70.6
WP_023484389.1\|853060_853966_+	hypothetical protein	NA	NA	NA	NA
WP_158225767.1\|854088_854223_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_024093313.1\|855169_855367_+	hypothetical protein	NA	NA	NA	NA
WP_077996893.1\|856062_856668_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	6.1e-51	52.5
WP_077996894.1\|856800_857295_+	hypothetical protein	NA	NA	NA	NA
WP_036657847.1\|857532_857922_+	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|858086_858770_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|858790_859660_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077996895.1\|860051_860600_+	hypothetical protein	NA	NA	NA	NA
858018:859739	attR	NA	NA	NA	NA
WP_077996896.1\|860626_860881_+	hypothetical protein	NA	NA	NA	NA
WP_077996897.1\|861285_863601_+	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	4.9e-32	24.7
WP_023483454.1\|864378_865047_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_077996898.1\|865332_866985_+	mannitol dehydrogenase family protein	NA	NA	NA	NA
WP_077996899.1\|866975_868046_+	mannonate dehydratase	NA	NA	NA	NA
WP_077996900.1\|869671_871066_+	glucuronate isomerase	NA	NA	NA	NA
WP_023483448.1\|871131_871782_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_077996901.1\|871783_872788_+	sugar kinase	NA	NA	NA	NA
WP_158672833.1\|872761_872893_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_158530409.1\|872988_874824_+	PRD domain-containing protein	NA	NA	NA	NA
WP_077996903.1\|874843_875722_+	ketose-bisphosphate aldolase	NA	NA	NA	NA
WP_079940350.1\|875749_877633_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_077996904.1\|877661_878126_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_036658101.1\|878155_878470_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_104932653.1\|878478_879579_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_077996906.1\|879959_881489_-	glycosyltransferase	A0A0N7G7L1	Chrysochromulina_ericina_virus	5.9e-42	32.4
WP_077996907.1\|881706_882573_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-08	31.4
WP_077996908.1\|882688_883828_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_077996909.1\|883824_884466_+	acetyltransferase	NA	NA	NA	NA
WP_077996910.1\|884483_885206_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077996911.1\|885601_886240_-	hemolysin III family protein	NA	NA	NA	NA
WP_036656232.1\|888438_888717_-	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	7.2e-07	38.3
WP_023483458.1\|888817_889024_-	cold-shock protein	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
WP_158672834.1\|890556_892509_-	hypothetical protein	NA	NA	NA	NA
WP_155121046.1\|893541_893685_+	hypothetical protein	NA	NA	NA	NA
WP_104932654.1\|894075_895193_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.4e-154	100.0
WP_155116254.1\|895467_895611_+	hypothetical protein	NA	NA	NA	NA
WP_077996914.1\|896510_896951_+	hypothetical protein	NA	NA	NA	NA
WP_077996915.1\|897237_897519_-	sugar nucleotide-binding protein	NA	NA	NA	NA
WP_077996916.1\|897326_897785_-	sugar nucleotide-binding protein	NA	NA	NA	NA
WP_077996917.1\|898748_899471_-	NTP transferase domain-containing protein	H9NC64	Sphingomonas_phage	7.8e-45	40.6
WP_158672730.1\|899716_899899_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077996919.1\|900484_901375_+	hypothetical protein	A0A024B055	Bacillus_phage	3.7e-12	43.6
WP_077997639.1\|901679_902561_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_077996920.1\|903112_903994_+	hypothetical protein	D2KRB9	Lactobacillus_phage	2.0e-10	33.0
WP_023484075.1\|904310_904709_+\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	1.1e-21	43.5
WP_077996921.1\|904811_905330_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_077996922.1\|905320_905695_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_077996923.1\|905933_907103_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_023484080.1\|907099_907828_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_077997640.1\|907831_908689_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_077996924.1\|908876_909545_+	HAD family hydrolase	NA	NA	NA	NA
WP_077996925.1\|909593_910799_+	hypothetical protein	NA	NA	NA	NA
WP_104932797.1\|910832_912782_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_077996927.1\|912991_914491_-	flotillin family protein	A0A2I2L4B2	Orpheovirus	1.6e-07	27.2
WP_077997641.1\|914531_915053_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_4

1018046 : 1085262

Paenibacillus_phage(30.77%)

tail,bacteriocin,coat,plate,tRNA,transposase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024095080.1\|1018046_1018208_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_024095079.1\|1018670_1018928_+	hypothetical protein	NA	NA	NA	NA
WP_023482424.1\|1019037_1020093_+	nucleoid-associated protein	A0A0A8WF33	Clostridium_phage	6.3e-11	25.0
WP_079940336.1\|1020107_1021589_+	hypothetical protein	NA	NA	NA	NA
WP_077996979.1\|1021641_1022118_+	hypothetical protein	NA	NA	NA	NA
WP_077997645.1\|1022435_1022798_-	ImmA/IrrE family metallo-endopeptidase	A0A2P1JU12	Anoxybacillus_phage	7.9e-14	40.7
WP_077996980.1\|1022898_1023354_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_079940799.1\|1023607_1024048_+	transcriptional regulator	A0A0C5AC66	Paenibacillus_phage	1.1e-57	78.0
WP_079940335.1\|1024149_1024821_+	hypothetical protein	NA	NA	NA	NA
WP_023482429.1\|1025292_1025721_+	hypothetical protein	NA	NA	NA	NA
WP_077996983.1\|1025695_1025878_+	hypothetical protein	NA	NA	NA	NA
WP_077996984.1\|1025878_1027213_+\|tail	phage tail sheath protein	A0A0A7S087	Clostridium_phage	1.7e-109	46.4
WP_077996985.1\|1027214_1027676_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	2.1e-48	60.3
WP_077996986.1\|1027695_1028118_+\|portal	phage portal protein	X5JAB6	Clostridium_phage	4.4e-24	41.8
WP_079940334.1\|1028489_1030535_+	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	3.0e-134	41.7
WP_079940333.1\|1030534_1031176_+	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	4.6e-49	46.3
WP_077996990.1\|1031180_1032149_+	hypothetical protein	S5MNC9	Brevibacillus_phage	1.7e-111	59.8
WP_077996991.1\|1032148_1032436_+	DUF2577 domain-containing protein	S5MC71	Brevibacillus_phage	1.5e-15	39.3
WP_077996992.1\|1032438_1032861_+	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	2.5e-27	48.5
WP_104932655.1\|1032838_1033915_+\|plate	baseplate J/gp47 family protein	S5MUH6	Brevibacillus_phage	5.3e-98	50.3
WP_077997646.1\|1033919_1034489_+	DUF2313 domain-containing protein	S5MA71	Brevibacillus_phage	2.7e-32	42.3
WP_077996993.1\|1034485_1034764_+	hypothetical protein	NA	NA	NA	NA
WP_077996994.1\|1034767_1036540_+	hypothetical protein	S5MNY5	Brevibacillus_phage	3.2e-15	45.2
WP_077996995.1\|1036552_1036948_+	hypothetical protein	NA	NA	NA	NA
WP_155121041.1\|1036940_1037099_+	hypothetical protein	NA	NA	NA	NA
WP_077996996.1\|1037137_1037377_+\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.3e-36	98.7
WP_104932656.1\|1038297_1038528_+\|transposase	transposase	A0A2I7SC00	Paenibacillus_phage	3.9e-27	100.0
WP_155121040.1\|1038674_1038842_+	hypothetical protein	A0A0K2CZ50	Paenibacillus_phage	6.2e-06	78.1
WP_079940798.1\|1039193_1040252_+	malate permease	NA	NA	NA	NA
WP_077996997.1\|1040288_1041311_+	lactate dehydrogenase	A0A1V0SBV6	Catovirus	6.3e-16	28.5
WP_077996998.1\|1041492_1041699_+	hypothetical protein	NA	NA	NA	NA
WP_077995249.1\|1041828_1043049_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_158672732.1\|1043261_1044533_-	hypothetical protein	NA	NA	NA	NA
WP_077997000.1\|1045214_1045562_+	hypothetical protein	NA	NA	NA	NA
WP_077997648.1\|1045612_1045957_-	DUF2512 family protein	NA	NA	NA	NA
WP_023484507.1\|1046141_1046345_+\|coat	spore coat-like protein	NA	NA	NA	NA
WP_024093574.1\|1046363_1046666_+\|coat	spore coat protein	NA	NA	NA	NA
WP_023484509.1\|1047492_1048632_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_077997001.1\|1048816_1049170_+	BMC domain-containing protein	NA	NA	NA	NA
WP_023484510.1\|1049181_1049613_+	EutP/PduV family microcompartment system protein	NA	NA	NA	NA
WP_036655167.1\|1049847_1050420_+	ANTAR domain-containing response regulator	NA	NA	NA	NA
WP_077997002.1\|1050412_1051837_+	sensor histidine kinase	NA	NA	NA	NA
WP_077997003.1\|1051978_1053409_+	ethanolamine ammonia-lyase reactivating factor EutA	NA	NA	NA	NA
WP_077997004.1\|1053438_1054803_+	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_077997005.1\|1054824_1055775_+	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_023484516.1\|1055793_1056447_+	ethanolamine utilization microcompartment protein EutL	NA	NA	NA	NA
WP_077997006.1\|1056458_1057199_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997007.1\|1057349_1058813_+	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_036655161.1\|1058862_1059150_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997008.1\|1059294_1060122_+	cobalamin adenosyltransferase	NA	NA	NA	NA
WP_077997009.1\|1060133_1060772_+	phosphate propanoyltransferase	NA	NA	NA	NA
WP_024093587.1\|1060790_1061474_+	putative ethanolamine utilization protein	NA	NA	NA	NA
WP_036655159.1\|1061486_1061759_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_036655157.1\|1061751_1062297_+	BMC domain-containing protein	NA	NA	NA	NA
WP_077997010.1\|1062316_1063432_+	ethanolamine utilization protein EutH	NA	NA	NA	NA
WP_077997011.1\|1063770_1064622_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_036655155.1\|1066058_1066253_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077997012.1\|1066586_1067054_+	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	3.5e-22	30.5
WP_144029556.1\|1067979_1068282_+	hypothetical protein	NA	NA	NA	NA
WP_077997013.1\|1068298_1068823_+	VanZ family protein	NA	NA	NA	NA
WP_077997014.1\|1068892_1069306_+	hypothetical protein	NA	NA	NA	NA
WP_077997015.1\|1069578_1069881_-	hypothetical protein	NA	NA	NA	NA
WP_077997016.1\|1070265_1070703_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_077997017.1\|1071291_1072347_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	1.7e-16	30.5
WP_077997019.1\|1072743_1073382_+	transcriptional regulator	NA	NA	NA	NA
WP_077997020.1\|1073670_1074732_+	selenide, water dikinase SelD	NA	NA	NA	NA
WP_077997021.1\|1074786_1075839_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_077997022.1\|1076098_1076569_+	hypothetical protein	NA	NA	NA	NA
WP_024093604.1\|1076631_1077009_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_077585253.1\|1077055_1077202_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077585252.1\|1077767_1078292_-	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	1.0e-06	28.3
WP_077997023.1\|1080615_1081914_+	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA
WP_036654509.1\|1082009_1082693_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932657.1\|1082713_1083583_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_077997024.1\|1083704_1084670_-	hypothetical protein	NA	NA	NA	NA
WP_155121039.1\|1084830_1085010_+	hypothetical protein	A0A2I7SCT0	Paenibacillus_phage	1.1e-29	98.3
WP_077997025.1\|1085019_1085262_+\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	1.2e-31	93.8

DBSCAN-SWA_5

1233169 : 1271627

Paenibacillus_phage(45.45%)

protease,transposase,holin,integrase

attL 1247275:1247290|attR 1273741:1273756

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995375.1\|1233169_1234393_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997111.1\|1234576_1235773_+	MFS transporter	NA	NA	NA	NA
WP_077997112.1\|1236675_1237380_-	HD domain-containing protein	NA	NA	NA	NA
WP_023483185.1\|1237575_1238529_+\|integrase	tyrosine-type recombinase/integrase	A0A097BYJ7	Leuconostoc_phage	1.2e-05	26.3
WP_079940311.1\|1240627_1241887_+	hypothetical protein	NA	NA	NA	NA
WP_077997115.1\|1241927_1242491_-	signal peptidase I	NA	NA	NA	NA
WP_077997116.1\|1242690_1243611_+	nucleoside hydrolase	NA	NA	NA	NA
WP_104932660.1\|1243836_1246047_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	3.5e-11	25.5
WP_023483179.1\|1246532_1247447_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.8e-70	45.5
1247275:1247290	attL	NA	NA	NA	NA
WP_024094971.1\|1247473_1249042_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_077997118.1\|1249266_1250190_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_077997119.1\|1250375_1251371_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_077997652.1\|1251717_1252230_+	hypothetical protein	NA	NA	NA	NA
WP_077997120.1\|1252328_1252907_-	hypothetical protein	NA	NA	NA	NA
WP_077997121.1\|1253059_1254493_-	hypothetical protein	NA	NA	NA	NA
WP_077997122.1\|1254522_1255512_-	glycosyltransferase family 2 protein	B9UDL7	Salmonella_phage	2.4e-49	40.0
WP_158672737.1\|1255799_1256291_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_077997124.1\|1256430_1257060_+	hypothetical protein	NA	NA	NA	NA
WP_077997125.1\|1257056_1258115_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_077997126.1\|1258171_1259110_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.8e-21	29.0
WP_077997127.1\|1259102_1259882_+	ABC transporter permease	NA	NA	NA	NA
WP_079940308.1\|1260069_1261419_+	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	3.1e-71	35.1
WP_155121036.1\|1261422_1261563_+	hypothetical protein	NA	NA	NA	NA
WP_077997129.1\|1261546_1261759_+	hypothetical protein	NA	NA	NA	NA
WP_077997130.1\|1261849_1262377_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_158672738.1\|1262818_1264777_+	transcription antiterminator	NA	NA	NA	NA
WP_077997133.1\|1264769_1265912_+	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA
WP_024094960.1\|1265890_1266253_+	PRD domain-containing protein	NA	NA	NA	NA
WP_023483163.1\|1266292_1266649_+	hypothetical protein	NA	NA	NA	NA
WP_158672739.1\|1266652_1266991_+	DUF4312 family protein	NA	NA	NA	NA
WP_036658006.1\|1267011_1267797_+	DUF4311 domain-containing protein	NA	NA	NA	NA
WP_079940306.1\|1267799_1268465_+	DUF4310 family protein	NA	NA	NA	NA
WP_023483159.1\|1268506_1269613_+	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA
WP_023483158.1\|1269616_1270351_+	oxo-acid lyase	NA	NA	NA	NA
WP_024094956.1\|1270580_1270736_-\|integrase	phage integrase family protein	A0A0K2CZ62	Paenibacillus_phage	4.5e-19	88.2
WP_077997135.1\|1270749_1271082_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CZ62	Paenibacillus_phage	1.0e-44	78.3
WP_149867773.1\|1271103_1271295_-	hypothetical protein	A0A0K2CZ62	Paenibacillus_phage	1.6e-21	76.2
WP_077584997.1\|1271540_1271627_+\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
1273741:1273756	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1398546 : 1405301

Staphylococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023482600.1\|1398546_1398984_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.6e-21	45.3
WP_036658391.1\|1399928_1401041_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.2e-52	35.5
WP_023482602.1\|1401044_1401710_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.4e-39	43.3
WP_077997196.1\|1401744_1402977_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.6e-112	51.3
WP_024093718.1\|1403008_1403479_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.2e-43	57.9
WP_077997197.1\|1403908_1404691_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.3e-08	33.3
WP_036658393.1\|1404659_1405301_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.2e-14	31.9

DBSCAN-SWA_7

1519905 : 1585027

Paenibacillus_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149867779.1\|1519905_1520526_-\|transposase	transposase	NA	NA	NA	NA
WP_024093806.1\|1521355_1522168_+	exported lipase-like protein	NA	NA	NA	NA
WP_023482722.1\|1522215_1523193_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.0e-36	36.4
WP_036658426.1\|1523185_1524178_+	ABC transporter permease	NA	NA	NA	NA
WP_077997249.1\|1524205_1526179_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	4.9e-126	42.4
WP_036657935.1\|1526240_1528700_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	7.3e-111	35.0
WP_077997250.1\|1528764_1529601_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_077995397.1\|1529776_1531000_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_079940555.1\|1531133_1532135_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_077997251.1\|1532179_1533112_+	aldo/keto reductase	NA	NA	NA	NA
WP_077997252.1\|1533131_1534280_-	ABC transporter permease	NA	NA	NA	NA
WP_077997253.1\|1534297_1535221_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.1e-25	33.0
WP_158672745.1\|1535252_1536008_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_077997255.1\|1536620_1537013_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_158672835.1\|1537464_1537785_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_036658430.1\|1538133_1538364_+	hypothetical protein	NA	NA	NA	NA
WP_077997257.1\|1538360_1538891_+	hypothetical protein	NA	NA	NA	NA
WP_024093817.1\|1539042_1539294_+	hypothetical protein	NA	NA	NA	NA
WP_149867781.1\|1539382_1539619_+	hypothetical protein	NA	NA	NA	NA
WP_104932666.1\|1540725_1549122_+	glycosyl transferase family 36	NA	NA	NA	NA
WP_079940556.1\|1549351_1550059_+	RHS repeat protein	NA	NA	NA	NA
WP_079940557.1\|1550075_1559186_+	hypothetical protein	S5W9C6	Leptospira_phage	5.4e-10	38.0
WP_077997262.1\|1559198_1559789_+	hypothetical protein	NA	NA	NA	NA
WP_149867782.1\|1560369_1560666_+	hypothetical protein	NA	NA	NA	NA
WP_079940559.1\|1560960_1561656_+	hypothetical protein	NA	NA	NA	NA
WP_077997266.1\|1561669_1562071_+	hypothetical protein	NA	NA	NA	NA
WP_149867783.1\|1562214_1562805_+	hypothetical protein	NA	NA	NA	NA
WP_077997268.1\|1562801_1563332_+	hypothetical protein	NA	NA	NA	NA
WP_158672746.1\|1563390_1564251_+	hypothetical protein	S5W9C6	Leptospira_phage	2.6e-07	44.6
WP_158672747.1\|1564258_1564765_+	DUF2247 family protein	NA	NA	NA	NA
WP_079940560.1\|1565167_1565926_+	RHS repeat protein	NA	NA	NA	NA
WP_077995397.1\|1565918_1567142_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.0e-227	99.8
WP_158672748.1\|1567206_1568172_+	hypothetical protein	S5W9C6	Leptospira_phage	1.1e-09	41.5
WP_079940561.1\|1568242_1568869_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_077997276.1\|1568918_1569227_+	hypothetical protein	NA	NA	NA	NA
WP_077997277.1\|1569204_1569531_+	hypothetical protein	NA	NA	NA	NA
WP_077997661.1\|1569820_1570084_+	hypothetical protein	NA	NA	NA	NA
WP_077997279.1\|1570096_1570402_+	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|1570642_1571866_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_158672749.1\|1571947_1572682_+	hypothetical protein	NA	NA	NA	NA
WP_079940562.1\|1572700_1573393_+	hypothetical protein	NA	NA	NA	NA
WP_158672750.1\|1573432_1574476_+	RHS repeat-associated core domain-containing protein	S5W9C6	Leptospira_phage	4.8e-11	37.2
WP_149867785.1\|1577670_1577970_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|1578326_1579550_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997286.1\|1580150_1580555_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_077997287.1\|1580565_1581297_-	RNA pseudouridine synthase	NA	NA	NA	NA
WP_079940564.1\|1581300_1582167_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077997288.1\|1582370_1583387_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
WP_036654509.1\|1583453_1584137_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|1584157_1585027_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0

DBSCAN-SWA_8

1604862 : 1660203

Paenibacillus_phage(50.0%)

protease,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932634.1\|1604862_1605732_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_023482953.1\|1605844_1606270_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_077997298.1\|1606398_1607262_-	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_149867787.1\|1607603_1608635_-	AI-2E family transporter	NA	NA	NA	NA
WP_096761176.1\|1608864_1609302_+	DUF2383 domain-containing protein	NA	NA	NA	NA
WP_077997300.1\|1609407_1609731_+	hypothetical protein	NA	NA	NA	NA
WP_077997664.1\|1610611_1610851_+\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_079940567.1\|1610957_1612721_+	hypothetical protein	NA	NA	NA	NA
WP_077997303.1\|1612717_1613257_+	stage II sporulation protein M	NA	NA	NA	NA
WP_077997305.1\|1613828_1614497_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-14	28.6
WP_077997665.1\|1614856_1616380_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_077997306.1\|1616476_1617454_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_077997307.1\|1617461_1618472_+	iron ABC transporter permease	NA	NA	NA	NA
WP_079940568.1\|1618464_1619493_+	iron ABC transporter permease	NA	NA	NA	NA
WP_077997308.1\|1619839_1621021_+	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	7.7e-26	38.9
WP_104932668.1\|1621176_1622294_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.6e-153	99.3
WP_077997309.1\|1622406_1623243_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077997310.1\|1623305_1624181_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_079940569.1\|1624328_1625546_-	cytochrome P450	NA	NA	NA	NA
WP_079940570.1\|1626008_1627889_+	AAA family ATPase	NA	NA	NA	NA
WP_042119509.1\|1627975_1628245_-	DUF2642 domain-containing protein	NA	NA	NA	NA
WP_079940571.1\|1628664_1629465_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_077997313.1\|1629587_1630694_+	hypothetical protein	NA	NA	NA	NA
WP_079940572.1\|1631035_1634011_+	AAA family ATPase	NA	NA	NA	NA
WP_155121089.1\|1634044_1634227_-	hypothetical protein	NA	NA	NA	NA
WP_079940574.1\|1634288_1634468_-	hypothetical protein	NA	NA	NA	NA
WP_079940575.1\|1635583_1636258_-	hypothetical protein	NA	NA	NA	NA
WP_077997318.1\|1636790_1637513_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077997319.1\|1638879_1639179_-	hypothetical protein	NA	NA	NA	NA
WP_155121090.1\|1639487_1639637_+	hypothetical protein	NA	NA	NA	NA
WP_079940576.1\|1641076_1643158_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_079940577.1\|1643996_1645037_-	hypothetical protein	NA	NA	NA	NA
WP_077997666.1\|1645564_1646317_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_079940578.1\|1646379_1647072_-	LrgB family protein	NA	NA	NA	NA
WP_077997322.1\|1647061_1647427_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_155121120.1\|1647754_1648957_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_077997323.1\|1649165_1650488_+	CBS domain-containing protein	NA	NA	NA	NA
WP_155121091.1\|1650773_1650935_+	hypothetical protein	NA	NA	NA	NA
WP_079940580.1\|1650994_1652287_+	isocitrate lyase	NA	NA	NA	NA
WP_079940821.1\|1652328_1653915_+	malate synthase A	NA	NA	NA	NA
WP_104932669.1\|1654050_1657176_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_079940583.1\|1657953_1660203_+\|protease	M6 family metalloprotease domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_9

1664921 : 1700777

Cafeteria_roenbergensis_virus(14.29%)

coat,transposase,integrase,tRNA

attL 1664435:1664449|attR 1701694:1701708

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1664435:1664449	attL	NA	NA	NA	NA
WP_079940822.1\|1664921_1665881_-\|transposase	DDE transposase	NA	NA	NA	NA
WP_023482840.1\|1668504_1669467_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_023482839.1\|1669564_1670134_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_104932670.1\|1670235_1671591_+	hypothetical protein	NA	NA	NA	NA
WP_079940586.1\|1671714_1674396_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.8e-28	22.1
WP_079940587.1\|1674426_1676475_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.5e-66	30.0
WP_036656949.1\|1676595_1677375_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_077997333.1\|1677362_1678325_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_077997334.1\|1678402_1678642_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_024094598.1\|1678790_1681223_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_079940823.1\|1681433_1682081_+	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	5.4e-21	48.8
WP_077997337.1\|1682131_1682518_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_052337439.1\|1682707_1683409_+	YdcF family protein	NA	NA	NA	NA
WP_023482829.1\|1683450_1684452_+	lipoate--protein ligase	NA	NA	NA	NA
WP_024094593.1\|1684578_1685568_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	3.4e-51	45.5
WP_042119655.1\|1685605_1686883_+	GTPase HflX	NA	NA	NA	NA
WP_024094591.1\|1686925_1688176_+	aluminum resistance protein	NA	NA	NA	NA
WP_023482825.1\|1688346_1688754_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_104932671.1\|1688787_1690122_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_023483571.1\|1692976_1693351_+	hypothetical protein	NA	NA	NA	NA
WP_155121093.1\|1693311_1694103_+	hypothetical protein	NA	NA	NA	NA
WP_158672751.1\|1694168_1697525_+	hypothetical protein	A0A1V0E026	Clostridioides_phage	8.2e-89	38.0
WP_077995249.1\|1697757_1698978_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_158672752.1\|1699112_1699355_-\|transposase	transposase	NA	NA	NA	NA
WP_158672753.1\|1699263_1699545_-	hypothetical protein	NA	NA	NA	NA
WP_104935368.1\|1699597_1699918_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_077997348.1\|1699962_1700289_-\|transposase	transposase	NA	NA	NA	NA
WP_077997349.1\|1700357_1700777_-\|integrase	tyrosine-type recombinase/integrase	A0A0S2SXP1	Bacillus_phage	4.8e-39	61.4
1701694:1701708	attR	NA	NA	NA	NA

DBSCAN-SWA_10

1948434 : 1956918

Paenibacillus_phage(77.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997474.1\|1948434_1948959_-	helix-turn-helix transcriptional regulator	A0A0K2CZC9	Paenibacillus_phage	1.1e-45	80.0
WP_077584965.1\|1949098_1949272_-	helix-turn-helix transcriptional regulator	A0A0K2CZS1	Paenibacillus_phage	2.9e-14	91.3
WP_079940630.1\|1949472_1951548_+	S8 family serine peptidase	NA	NA	NA	NA
WP_036654509.1\|1951871_1952555_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|1952575_1953445_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_079940631.1\|1953696_1953879_+	hypothetical protein	A0A0C5AEH5	Bacteriophage	9.7e-21	89.7
WP_158672763.1\|1953875_1954244_+	hypothetical protein	A0A2I7SC06	Paenibacillus_phage	4.5e-49	86.9
WP_077995249.1\|1954342_1955563_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077997680.1\|1956254_1956458_-	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	2.7e-27	89.6
WP_077997477.1\|1956474_1956918_-	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.7e-42	56.6

DBSCAN-SWA_11

1983230 : 2041047

Paenibacillus_phage(91.43%)

tail,holin,terminase,capsid,integrase,portal

attL 1975490:1975521|attR 2036171:2036202

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1975490:1975521	attL	NA	NA	NA	NA
WP_079940638.1\|1983230_1984454_-\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	9.3e-200	86.0
WP_079940639.1\|1984479_1985178_-	LexA family transcriptional regulator	A0A2I7SCV6	Paenibacillus_phage	2.1e-47	46.0
WP_079940640.1\|1985314_1985515_+	helix-turn-helix transcriptional regulator	A0A2H4J3K6	uncultured_Caudovirales_phage	1.6e-08	44.1
WP_079940641.1\|1985580_1985808_+	excisionase family DNA-binding protein	A0A0C5AN65	Paenibacillus_phage	9.0e-24	77.1
WP_155121099.1\|1985833_1986247_+	hypothetical protein	A0A0N9SSV8	Paenibacillus_phage	2.5e-24	60.0
WP_079940643.1\|1986226_1986535_-	hypothetical protein	NA	NA	NA	NA
WP_079940644.1\|1986654_1987293_+	hypothetical protein	A0A0N9RZD8	Paenibacillus_phage	6.5e-128	99.1
WP_079940645.1\|1987315_1988110_+	phage antirepressor KilAC domain-containing protein	A0A0N9SJU0	Paenibacillus_phage	2.0e-126	87.3
WP_155121100.1\|1988106_1988283_+	hypothetical protein	NA	NA	NA	NA
WP_155121101.1\|1988279_1988453_+	hypothetical protein	A0A0N9SIN5	Paenibacillus_phage	1.6e-20	91.2
WP_077995167.1\|1988449_1988752_+	hypothetical protein	A0A0N9S7X2	Paenibacillus_phage	3.5e-47	96.0
WP_077995168.1\|1988767_1989094_+	helix-turn-helix domain-containing protein	A0A0N7GFE9	Paenibacillus_phage	6.6e-52	94.4
WP_149867651.1\|1989229_1989721_+	hypothetical protein	A0A0N9SJV6	Paenibacillus_phage	1.3e-19	44.4
WP_079940646.1\|1989778_1990150_+	hypothetical protein	A0A0N9SHL8	Paenibacillus_phage	3.4e-60	92.7
WP_040932746.1\|1990133_1990511_+	hypothetical protein	A0A0N9SSX1	Paenibacillus_phage	1.9e-55	84.8
WP_040932748.1\|1990529_1990796_+	hypothetical protein	A0A0N9RRC8	Paenibacillus_phage	3.7e-37	84.1
WP_077995171.1\|1990803_1991574_+	DNA replication protein	A0A0N7GFF0	Paenibacillus_phage	2.5e-142	94.9
WP_077995172.1\|1991570_1992947_+	AAA family ATPase	A0A0N9SIP5	Paenibacillus_phage	2.3e-223	84.5
WP_079940647.1\|1992959_1993910_+	toprim domain-containing protein	A0A0N9S7Y2	Paenibacillus_phage	1.5e-152	82.9
WP_077995175.1\|1993969_1994548_+	hypothetical protein	A0A0N9SGJ9	Paenibacillus_phage	7.6e-51	55.2
WP_077995176.1\|1994613_1995141_+	hypothetical protein	A0A0N9RTM1	Paenibacillus_phage	8.4e-81	93.7
WP_077995177.1\|1995225_1995948_+	hypothetical protein	A0A0N9SJW5	Paenibacillus_phage	9.3e-123	90.2
WP_077995178.1\|1996123_1996465_+	hypothetical protein	A0A7H5	Microcystis_virus	4.7e-08	43.5
WP_077995179.1\|1996609_1997023_+	hypothetical protein	A0A0N9RZF9	Paenibacillus_phage	5.0e-73	96.4
WP_079940648.1\|1997234_1997831_+	hypothetical protein	A0A0N9SIQ5	Paenibacillus_phage	1.3e-61	67.8
WP_079940828.1\|1997996_1999628_+	DNA polymerase I	A0A0N9S7Z3	Paenibacillus_phage	2.9e-305	94.3
WP_149867652.1\|1999596_1999947_+	hypothetical protein	A0A0N9SGL0	Paenibacillus_phage	1.8e-31	60.7
WP_077995183.1\|1999940_2001068_+	hypothetical protein	A0A0N9RTM8	Paenibacillus_phage	4.6e-177	79.4
WP_077995184.1\|2001068_2001266_+	hypothetical protein	A0A0N7GFF2	Paenibacillus_phage	4.7e-29	95.4
WP_077995185.1\|2001262_2001877_+	3'-5' exonuclease	A0A0N9SJX9	Paenibacillus_phage	2.8e-104	96.1
WP_077995186.1\|2001861_2002881_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	4.6e-136	81.1
WP_158672766.1\|2003137_2003389_+	hypothetical protein	A0A0N9ST03	Paenibacillus_phage	3.2e-30	85.5
WP_077995188.1\|2003385_2003568_+	hypothetical protein	NA	NA	NA	NA
WP_077995189.1\|2003533_2005852_+	ribonucleoside-diphosphate reductase subunit alpha	A0A0Y0AS84	Bacillus_phage	1.3e-279	63.4
WP_077995190.1\|2005865_2006897_+	ribonucleotide-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	1.9e-121	61.2
WP_079940649.1\|2006908_2007436_+	dUTP diphosphatase	D2XR49	Bacillus_phage	1.9e-40	54.3
WP_077995192.1\|2007428_2007725_+	hypothetical protein	NA	NA	NA	NA
WP_077995193.1\|2007721_2008060_+	hypothetical protein	NA	NA	NA	NA
WP_040930425.1\|2008060_2008387_+	hypothetical protein	NA	NA	NA	NA
WP_077995194.1\|2008528_2008729_+	hypothetical protein	A0A0N7GFF3	Paenibacillus_phage	1.1e-28	95.2
WP_077995195.1\|2008725_2008956_+	hypothetical protein	NA	NA	NA	NA
WP_077995196.1\|2008957_2009275_+	hypothetical protein	A0A0N9S804	Paenibacillus_phage	1.6e-50	87.6
WP_077995197.1\|2009268_2009739_+	DUF4065 domain-containing protein	A0A0N9SGM1	Paenibacillus_phage	3.2e-76	86.8
WP_077995198.1\|2009735_2010104_+	DUF5406 family protein	NA	NA	NA	NA
WP_077995199.1\|2010147_2011227_+	hypothetical protein	A0A0N9RTN7	Paenibacillus_phage	3.6e-62	51.7
WP_079940650.1\|2011210_2011771_+	AAA family ATPase	A0A0N9SJZ0	Paenibacillus_phage	1.6e-85	85.8
WP_155121102.1\|2011727_2011982_-	hypothetical protein	A0A0N9SHP7	Paenibacillus_phage	9.7e-35	76.2
WP_079940652.1\|2012189_2012597_+	DUF134 domain-containing protein	A0A0N9RZI0	Paenibacillus_phage	2.0e-58	88.1
WP_077995202.1\|2012586_2013039_+	hypothetical protein	A0A0N7GFF4	Paenibacillus_phage	4.5e-59	77.3
WP_079940653.1\|2013960_2014206_+	hypothetical protein	A0A0N9SIR9	Paenibacillus_phage	4.5e-13	97.8
WP_079940829.1\|2014198_2015029_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	2.6e-153	97.8
WP_077995205.1\|2015371_2015566_+	hypothetical protein	A0A0N9RTP7	Paenibacillus_phage	1.4e-06	86.2
WP_077995206.1\|2015587_2016007_+	hypothetical protein	A0A0N9SJZ8	Paenibacillus_phage	4.8e-71	92.8
WP_024094642.1\|2015996_2016395_+	helix-turn-helix domain-containing protein	A0A0N7GFF5	Paenibacillus_phage	7.5e-66	99.2
WP_155121103.1\|2017316_2017481_+	hypothetical protein	NA	NA	NA	NA
WP_155121104.1\|2017584_2017761_+	hypothetical protein	A0A0N9SSS1	Paenibacillus_phage	2.2e-17	94.8
WP_079940654.1\|2018026_2018326_+	hypothetical protein	NA	NA	NA	NA
WP_077997491.1\|2018538_2020224_+\|terminase	phage terminase large subunit	A0A0N9RZA7	Paenibacillus_phage	5.8e-301	97.6
WP_077995210.1\|2020247_2021732_+\|portal	phage portal protein	A0A0N7GFE4	Paenibacillus_phage	5.7e-244	92.1
WP_077995211.1\|2021728_2022589_+\|capsid	minor capsid protein	A0A0N9SJR1	Paenibacillus_phage	1.6e-145	93.4
WP_079940655.1\|2022680_2023316_+	hypothetical protein	A0A0N9SIL0	Paenibacillus_phage	3.0e-61	74.4
WP_077995214.1\|2023371_2024307_+	hypothetical protein	A0A0N9S7T7	Paenibacillus_phage	2.7e-167	94.9
WP_079940656.1\|2024321_2024705_+	hypothetical protein	A0A0N9SGG4	Paenibacillus_phage	9.7e-63	95.3
WP_077995215.1\|2024705_2025038_+	hypothetical protein	A0A0N9RTI3	Paenibacillus_phage	1.7e-55	96.4
WP_077995216.1\|2025034_2025460_+	hypothetical protein	A0A0N9SJT1	Paenibacillus_phage	3.5e-69	92.2
WP_077995217.1\|2025456_2025831_+	hypothetical protein	A0A0N7GFE5	Paenibacillus_phage	4.7e-62	94.4
WP_077995218.1\|2025843_2026392_+	hypothetical protein	A0A0N9SHI3	Paenibacillus_phage	2.9e-92	95.1
WP_079940657.1\|2026442_2026820_+	hypothetical protein	A0A0N9SST2	Paenibacillus_phage	5.1e-56	92.0
WP_155121105.1\|2026999_2027170_+	hypothetical protein	A0A0N9RZB8	Paenibacillus_phage	2.8e-14	74.5
WP_079940658.1\|2027197_2030092_+\|tail	phage tail tape measure protein	A0A0N9SJR9	Paenibacillus_phage	5.2e-249	56.2
WP_077995224.1\|2030091_2031549_+\|tail	phage tail family protein	A0A0N9RRA9	Paenibacillus_phage	1.3e-277	94.8
WP_158672767.1\|2031551_2033873_+	hypothetical protein	A0A0N9SIL8	Paenibacillus_phage	0.0e+00	97.5
WP_158672768.1\|2033869_2034307_+	hypothetical protein	A0A0N9S7V6	Paenibacillus_phage	1.1e-67	90.3
WP_077995228.1\|2034294_2034711_+\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	2.9e-68	97.1
WP_077995229.1\|2034703_2035573_+	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	1.6e-161	95.2
WP_077995230.1\|2035860_2036154_-	hypothetical protein	NA	NA	NA	NA
WP_077995231.1\|2036292_2036505_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
2036171:2036202	attR	NA	NA	NA	NA
WP_077995232.1\|2036507_2036891_+	hypothetical protein	NA	NA	NA	NA
WP_077995233.1\|2036896_2037133_+	hypothetical protein	NA	NA	NA	NA
WP_077995234.1\|2037578_2037941_-	hypothetical protein	A0A142F168	Bacillus_phage	7.6e-17	46.7
WP_077995235.1\|2038414_2038594_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155121106.1\|2038605_2038974_-	hypothetical protein	A0A2I7SCF4	Paenibacillus_phage	2.6e-52	83.2
WP_077995236.1\|2038976_2039327_-	hypothetical protein	A0A2I7SCF2	Paenibacillus_phage	4.6e-51	87.1
WP_040931863.1\|2039371_2039797_-	hypothetical protein	NA	NA	NA	NA
WP_077995237.1\|2039961_2040588_-	hypothetical protein	A0A0N9SJT2	Paenibacillus_phage	2.5e-39	62.4
WP_079940660.1\|2040660_2041047_-	hypothetical protein	A0A0N9SIM5	Paenibacillus_phage	3.4e-63	94.5

DBSCAN-SWA_12

2318178 : 2380121

Paenibacillus_phage(55.0%)

protease,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158672772.1\|2318178_2318643_-\|protease	trypsin-like serine protease	W5SAB9	Pithovirus	3.4e-09	41.1
WP_155121112.1\|2318686_2318848_-	hypothetical protein	NA	NA	NA	NA
WP_079940833.1\|2318972_2320145_+	MFS transporter	NA	NA	NA	NA
WP_077995360.1\|2320167_2320926_-	TrmB family transcriptional regulator	NA	NA	NA	NA
WP_079940834.1\|2321104_2321836_+	hypothetical protein	NA	NA	NA	NA
WP_079940693.1\|2321864_2323331_+	antitoxin	NA	NA	NA	NA
WP_079940835.1\|2323415_2323979_-	hypothetical protein	NA	NA	NA	NA
WP_024094102.1\|2324103_2325000_-	cation transporter	NA	NA	NA	NA
WP_024094104.1\|2325983_2326352_+	hypothetical protein	NA	NA	NA	NA
WP_077995363.1\|2326542_2327277_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_023484542.1\|2327332_2328118_-	delta-lactam-biosynthetic de-N-acetylase	NA	NA	NA	NA
WP_079940695.1\|2328231_2329749_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_104932805.1\|2329828_2330845_-	amidase domain-containing protein	NA	NA	NA	NA
WP_023484539.1\|2331421_2331694_-	ribonuclease inhibitor-like protein	NA	NA	NA	NA
WP_104932703.1\|2331714_2332134_-	ribonuclease	NA	NA	NA	NA
WP_077995368.1\|2332656_2334087_-	MBL fold metallo-hydrolase	A0A2N9QVZ6	Dishui_lake_phycodnavirus	1.3e-06	36.6
WP_077995369.1\|2334161_2335361_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_077995370.1\|2335843_2336074_-	hypothetical protein	NA	NA	NA	NA
WP_158672773.1\|2336337_2337396_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_024094116.1\|2337510_2338527_+	NTP transferase domain-containing protein	K7QKA7	Escherichia_phage	8.7e-26	33.5
WP_104932488.1\|2339470_2339698_-	hypothetical protein	NA	NA	NA	NA
WP_023484729.1\|2339786_2340560_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_077995376.1\|2340900_2341431_-	hypothetical protein	NA	NA	NA	NA
WP_104932704.1\|2341810_2344237_-	penicillin acylase family protein	NA	NA	NA	NA
WP_036656619.1\|2344730_2345522_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_079940699.1\|2345557_2346238_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_077995379.1\|2346242_2347775_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_079940700.1\|2348148_2349267_-	UDP-glucuronosyltransferase	NA	NA	NA	NA
WP_023484737.1\|2349443_2350271_+	metallophosphoesterase	NA	NA	NA	NA
WP_079940701.1\|2350717_2352280_-	gluconokinase	NA	NA	NA	NA
WP_042118974.1\|2352314_2353676_-	GntP family permease	NA	NA	NA	NA
WP_024094123.1\|2353786_2354464_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_023484741.1\|2355639_2355957_-	DUF4870 domain-containing protein	A0A2H4JDX0	uncultured_Caudovirales_phage	3.4e-13	45.0
WP_077995381.1\|2356545_2356857_-	DUF4870 domain-containing protein	A0A2H4J741	uncultured_Caudovirales_phage	1.4e-11	45.9
WP_104932806.1\|2357306_2358352_-\|transposase	IS630 family transposase	A0A1V0SDF8	Indivirus	7.9e-06	20.9
WP_077995382.1\|2358827_2359019_+	hypothetical protein	NA	NA	NA	NA
WP_077995383.1\|2359671_2360061_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_077995384.1\|2360549_2363105_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	1.9e-258	56.1
WP_077997499.1\|2363358_2363778_+	DUF4064 domain-containing protein	A0A0K2CZQ0	Paenibacillus_phage	5.7e-24	100.0
WP_079940702.1\|2364070_2366704_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	3.1e-232	47.7
WP_077995388.1\|2368253_2369195_+	hypothetical protein	NA	NA	NA	NA
WP_077997500.1\|2370002_2370221_-	helix-turn-helix transcriptional regulator	A0A2I7SC05	Paenibacillus_phage	4.0e-13	50.0
WP_079940703.1\|2370679_2370871_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	3.4e-24	94.7
WP_036654824.1\|2370867_2371140_+	hypothetical protein	A0A0C5AEQ9	Bacteriophage	3.9e-42	100.0
WP_077995391.1\|2371143_2371356_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	1.3e-29	97.0
WP_077995392.1\|2371707_2372256_-	hypothetical protein	A0A0C5AEH5	Bacteriophage	9.9e-77	85.8
WP_104932621.1\|2372507_2373377_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|2373397_2374081_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_079940836.1\|2374338_2374521_-	hypothetical protein	NA	NA	NA	NA
WP_036654509.1\|2374751_2375435_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932621.1\|2375455_2376325_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_077995401.1\|2378190_2378463_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	4.5e-30	93.3
WP_077995402.1\|2378666_2380121_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9

DBSCAN-SWA_13

2642346 : 2696343

Paenibacillus_phage(34.78%)

tRNA,protease,transposase,integrase

attL 2681255:2681270|attR 2696824:2696839

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042119028.1\|2642346_2643741_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A2H5BJT2	Erwinia_phage	3.8e-40	27.6
WP_036653992.1\|2643910_2644453_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_077997509.1\|2644631_2645960_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_023484649.1\|2645972_2648063_-	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	1.8e-110	40.9
WP_077995507.1\|2648210_2649320_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.7e-38	40.4
WP_077995508.1\|2649423_2650359_-	succinate--CoA ligase subunit alpha	NA	NA	NA	NA
WP_077995509.1\|2650415_2651576_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_024094298.1\|2651964_2652225_-	hypothetical protein	NA	NA	NA	NA
WP_024094299.1\|2652256_2652652_-	hypothetical protein	NA	NA	NA	NA
WP_077997510.1\|2652866_2654390_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_024094301.1\|2654487_2654892_-	YraN family protein	NA	NA	NA	NA
WP_023484363.1\|2654901_2655234_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
WP_104932713.1\|2655230_2657042_-	hypothetical protein	NA	NA	NA	NA
WP_023484361.1\|2657096_2657780_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	5.7e-21	37.7
WP_077995513.1\|2658072_2658954_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_077995514.1\|2659062_2659647_-	signal peptidase I	NA	NA	NA	NA
WP_023484358.1\|2659758_2660100_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_024094305.1\|2660242_2660995_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_077995515.1\|2660991_2661513_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_023484355.1\|2661738_2661969_-	KH domain-containing protein	NA	NA	NA	NA
WP_023484354.1\|2661991_2662264_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_023484353.1\|2662305_2663673_-	signal recognition particle protein	NA	NA	NA	NA
WP_024094307.1\|2663702_2664065_-	putative DNA-binding protein	NA	NA	NA	NA
WP_077995516.1\|2664198_2665206_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_023484350.1\|2665290_2668869_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_077997511.1\|2669037_2669739_-	ribonuclease III	A0A167RGU4	Powai_lake_megavirus	2.1e-26	29.6
WP_024094309.1\|2669918_2671154_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_024094310.1\|2671243_2671477_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	6.0e-07	38.0
WP_024094311.1\|2671595_2672336_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	5.0e-23	36.4
WP_023484345.1\|2672435_2673371_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_077995517.1\|2673402_2674389_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_024094313.1\|2674399_2675386_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_077584878.1\|2675387_2675978_-	transcription factor FapR	NA	NA	NA	NA
WP_023484341.1\|2676153_2676327_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_077995518.1\|2676445_2676958_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_036658730.1\|2677045_2678119_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_023484339.1\|2678303_2679653_+	spore cortex formation factor-like protein	NA	NA	NA	NA
WP_023484338.1\|2679663_2680173_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.0e-26	39.5
WP_023484337.1\|2680190_2680748_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
2681255:2681270	attL	NA	NA	NA	NA
WP_024094320.1\|2681297_2681495_-	helix-turn-helix transcriptional regulator	D0R7I7	Paenibacillus_phage	2.4e-09	76.9
WP_024094321.1\|2681559_2681973_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	8.7e-33	98.6
WP_024094322.1\|2682120_2682510_-	hypothetical protein	NA	NA	NA	NA
WP_077995520.1\|2683291_2683429_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_079940765.1\|2683609_2684941_-	chitin-binding protein	A0A2D1GD28	Mycobacterium_phage	4.1e-07	29.3
WP_104932807.1\|2685387_2686432_+\|transposase	IS630 family transposase	A0A1V0SDF8	Indivirus	6.0e-06	20.9
WP_077995522.1\|2686497_2686740_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	8.6e-33	98.8
WP_077585229.1\|2686749_2687418_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A0K2CXQ8	Paenibacillus_phage	4.0e-128	95.9
WP_024094328.1\|2687417_2687657_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
WP_104932714.1\|2688069_2689285_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.6e-12	28.7
WP_077995527.1\|2690628_2690979_-	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	5.8e-30	60.9
WP_077995375.1\|2691028_2692252_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_158672787.1\|2692632_2692923_-	hypothetical protein	A0A0C5AFG5	Paenibacillus_phage	6.5e-35	79.8
WP_077995529.1\|2693062_2693578_+	DUF3231 family protein	NA	NA	NA	NA
WP_042119037.1\|2693660_2693864_-	hypothetical protein	A0A0S2SXP3	Bacillus_phage	6.8e-07	40.0
WP_158672788.1\|2694459_2694684_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158672838.1\|2694947_2695541_+	hypothetical protein	R9VW28	Paenibacillus_phage	4.0e-39	44.2
WP_158672789.1\|2695560_2696118_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	3.0e-28	40.4
WP_158672790.1\|2696127_2696343_+\|integrase	tyrosine-type recombinase/integrase	S5MNZ2	Brevibacillus_phage	3.3e-20	71.6
2696824:2696839	attR	NA	NA	NA	NA

DBSCAN-SWA_14

2790520 : 2826307

Brevibacillus_phage(57.69%)

tail,terminase,capsid,bacteriocin,plate,transposase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149867691.1\|2790520_2790622_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_077997514.1\|2791082_2791367_+	hypothetical protein	NA	NA	NA	NA
WP_077995568.1\|2791347_2792760_-	NADP-dependent phosphogluconate dehydrogenase	E3SJC4	Synechococcus_phage	3.0e-32	29.4
WP_104932718.1\|2793440_2793680_-	hypothetical protein	A0A0K2CYG5	Paenibacillus_phage	1.5e-21	64.9
WP_104932719.1\|2794343_2795603_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_104932720.1\|2796288_2796780_-	hypothetical protein	NA	NA	NA	NA
WP_104932721.1\|2797481_2798471_+	hypothetical protein	NA	NA	NA	NA
WP_079940233.1\|2798440_2799313_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_079940235.1\|2799711_2800194_-	SocA family protein	A0A0N9SGM1	Paenibacillus_phage	1.2e-25	41.3
WP_079940237.1\|2801395_2803114_-	DUF2326 domain-containing protein	NA	NA	NA	NA
WP_079940238.1\|2803104_2803332_-	hypothetical protein	NA	NA	NA	NA
WP_079940239.1\|2803318_2804302_-	SMEK domain-containing protein	NA	NA	NA	NA
WP_079940787.1\|2804733_2805369_-	hypothetical protein	NA	NA	NA	NA
WP_079940240.1\|2805403_2806120_-	hypothetical protein	NA	NA	NA	NA
WP_079940241.1\|2806255_2806498_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	7.3e-32	96.2
WP_036655918.1\|2807461_2807698_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
WP_077996661.1\|2808011_2808302_-	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
WP_077996660.1\|2808313_2808904_-	hypothetical protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
WP_079940243.1\|2808907_2809186_-	hypothetical protein	NA	NA	NA	NA
WP_104932808.1\|2809182_2809746_-	DUF2313 domain-containing protein	S5MA71	Brevibacillus_phage	5.7e-35	46.4
WP_079940245.1\|2809756_2810833_-\|plate	baseplate J/gp47 family protein	A0A0K2CP27	Brevibacillus_phage	1.2e-102	53.3
WP_079940246.1\|2810825_2811236_-	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	1.2e-29	50.0
WP_079940247.1\|2811238_2811481_-	DUF2577 domain-containing protein	S6C459	Thermus_phage	3.1e-14	47.6
WP_079940248.1\|2811480_2812464_-	hypothetical protein	S5MA66	Brevibacillus_phage	2.6e-104	55.9
WP_079940249.1\|2812468_2813107_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	2.2e-51	49.5
WP_079940250.1\|2813103_2815221_-	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	1.2e-141	42.3
WP_023485206.1\|2815444_2815870_-	hypothetical protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
WP_079940251.1\|2815896_2816361_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	7.2e-52	62.7
WP_158672793.1\|2817696_2817864_-	hypothetical protein	NA	NA	NA	NA
WP_079940253.1\|2817856_2818267_-	hypothetical protein	S5MUN8	Brevibacillus_phage	2.3e-25	45.2
WP_079940789.1\|2818674_2818995_-	ABC transporter ATP-binding protein	S5M673	Brevibacillus_phage	6.5e-28	57.5
WP_079940255.1\|2819035_2819407_-	DNA-packaging protein	S5MP25	Brevibacillus_phage	1.3e-32	60.5
WP_079940256.1\|2819432_2819690_-	hypothetical protein	NA	NA	NA	NA
WP_079940257.1\|2819701_2820745_-\|capsid	phage capsid protein	A0A0K2CP76	Brevibacillus_phage	1.1e-172	87.0
WP_079940790.1\|2820760_2821120_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	3.6e-43	73.0
WP_079940258.1\|2821132_2821756_-	hypothetical protein	A0A0K2CP96	Brevibacillus_phage	2.4e-71	68.9
WP_079940259.1\|2821799_2822819_-\|capsid	minor capsid protein	S5MTV5	Brevibacillus_phage	2.6e-102	53.8
WP_104932722.1\|2822815_2824288_-\|portal	phage portal protein	A0A0K2CNK4	Brevibacillus_phage	3.5e-169	62.0
WP_079940260.1\|2824302_2825574_-\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.3e-164	66.0
WP_079940261.1\|2825566_2826307_-	hypothetical protein	A0A2H4J4R0	uncultured_Caudovirales_phage	2.1e-45	48.4

DBSCAN-SWA_15

2829317 : 2845582

Paenibacillus_phage(76.92%)

integrase

attL 2842279:2842292|attR 2851407:2851420

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079940266.1\|2829317_2829530_-	DUF2829 domain-containing protein	A0A1C8E971	Bacillus_phage	7.8e-30	87.0
WP_079940267.1\|2829590_2829941_-	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	6.2e-56	88.8
WP_155121032.1\|2829961_2830135_-	hypothetical protein	A0A0K2CZI7	Paenibacillus_phage	8.1e-17	77.2
WP_079940268.1\|2830353_2830557_-	hypothetical protein	A0A0K2CZA1	Paenibacillus_phage	1.9e-25	86.6
WP_104932809.1\|2830690_2831146_-	transcriptional regulator	A0A0C5AC66	Paenibacillus_phage	5.8e-54	73.0
WP_104932723.1\|2831296_2831629_-	hypothetical protein	NA	NA	NA	NA
WP_104932724.1\|2831621_2832029_-	hypothetical protein	A8ASP1	Listeria_phage	4.9e-12	39.6
WP_104932725.1\|2832035_2832260_-	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	1.2e-31	94.4
WP_036654579.1\|2832266_2832545_-	hypothetical protein	NA	NA	NA	NA
WP_158672794.1\|2832596_2832740_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	4.5e-13	80.0
WP_104932810.1\|2832755_2833451_-	dUTPase	A0A1L2JY27	Aeribacillus_phage	4.7e-31	39.1
WP_104932726.1\|2833571_2834672_-	sigma-70 family RNA polymerase sigma factor	A0A0K2CZU8	Paenibacillus_phage	1.4e-159	79.5
WP_104932727.1\|2834876_2835251_-	RusA family crossover junction endodeoxyribonuclease	A0A0K2CYQ8	Paenibacillus_phage	2.6e-44	67.5
WP_104932728.1\|2835252_2835462_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	1.7e-29	86.8
WP_104932729.1\|2835580_2836402_-	ATP-binding protein	A0A0K2CYM7	Paenibacillus_phage	4.9e-120	98.6
WP_077996825.1\|2836292_2837183_-	DnaD domain protein	A0A0K2CY85	Paenibacillus_phage	2.7e-124	86.5
WP_077996824.1\|2837231_2837564_-	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	1.6e-53	92.7
WP_077996823.1\|2837588_2837990_-	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.9e-46	73.5
WP_077996822.1\|2838039_2838843_-	hypothetical protein	A0A0P0IZH9	Lactobacillus_phage	5.4e-47	40.0
WP_155121034.1\|2839784_2839952_-	hypothetical protein	NA	NA	NA	NA
WP_077996820.1\|2840130_2840394_-	hypothetical protein	A0A0C5AFB6	Paenibacillus_phage	5.7e-30	70.1
WP_077996819.1\|2840408_2841086_-	hypothetical protein	A0A2I7SCV5	Paenibacillus_phage	1.8e-59	84.5
WP_077996818.1\|2841082_2841271_-	hypothetical protein	NA	NA	NA	NA
WP_158672717.1\|2841275_2841446_-	hypothetical protein	A0A0K2CZS8	Paenibacillus_phage	8.2e-22	92.0
WP_077996817.1\|2841442_2841667_-	hypothetical protein	A0A0K2CZE0	Paenibacillus_phage	7.8e-20	72.5
WP_104932730.1\|2841663_2842035_-	hypothetical protein	R9VW30	Paenibacillus_phage	3.2e-55	90.0
WP_104932731.1\|2842027_2842315_-	hypothetical protein	NA	NA	NA	NA
2842279:2842292	attL	NA	NA	NA	NA
WP_104932732.1\|2842330_2842621_-	helix-turn-helix domain-containing protein	A0A0K2CZS5	Paenibacillus_phage	1.9e-39	84.2
WP_104932733.1\|2842617_2843358_-	phage antirepressor Ant	A0A0C5AFE7	Paenibacillus_phage	2.9e-132	96.3
WP_104932734.1\|2843354_2843624_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104932735.1\|2843850_2844270_+	helix-turn-helix domain-containing protein	Q786F1	Bacillus_phage	3.4e-16	49.4
WP_104932736.1\|2844352_2845582_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	1.6e-119	54.6
2851407:2851420	attR	NA	NA	NA	NA

DBSCAN-SWA_16

2900556 : 2911682

Paenibacillus_phage(61.54%)

integrase

attL 2908404:2908417|attR 2913364:2913377

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079940192.1\|2900556_2901930_-	family 10 glycosylhydrolase	A0A2I7SC76	Paenibacillus_phage	4.8e-27	88.5
WP_079940193.1\|2902639_2902972_-	hypothetical protein	A0A2I7SCG0	Paenibacillus_phage	8.5e-31	90.5
WP_077995599.1\|2903121_2903511_+	hypothetical protein	A0A0K2CZD8	Paenibacillus_phage	1.3e-06	50.7
WP_024094459.1\|2903700_2903904_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	5.0e-26	88.1
WP_077995601.1\|2904528_2905173_+	hypothetical protein	NA	NA	NA	NA
WP_077995602.1\|2905787_2905991_+	hypothetical protein	A0A0K2CYF6	Paenibacillus_phage	5.8e-06	60.0
WP_024094463.1\|2906059_2906281_-	helix-turn-helix transcriptional regulator	A0A0E3U244	Fusobacterium_phage	3.8e-11	44.4
WP_077995603.1\|2906379_2906571_+	hypothetical protein	A0A2I7SC25	Paenibacillus_phage	4.4e-24	100.0
WP_155121024.1\|2906574_2906727_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	2.3e-07	81.2
WP_079940195.1\|2907141_2907633_-	hypothetical protein	A0A0C5AEH5	Bacteriophage	1.7e-72	90.9
WP_079940196.1\|2908022_2908523_-	hypothetical protein	R9VWV6	Paenibacillus_phage	7.1e-05	31.7
2908404:2908417	attL	NA	NA	NA	NA
WP_077995606.1\|2909102_2909285_+	hypothetical protein	NA	NA	NA	NA
WP_077995607.1\|2909580_2909991_+	helix-turn-helix transcriptional regulator	F8J1E0	Lactobacillus_phage	2.3e-09	39.8
WP_077995608.1\|2910022_2910439_+	ImmA/IrrE family metallo-endopeptidase	A0A2P1JU12	Anoxybacillus_phage	4.6e-18	37.0
WP_079940197.1\|2910560_2911682_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	4.4e-87	45.3
2913364:2913377	attR	NA	NA	NA	NA

DBSCAN-SWA_17

3210243 : 3310831

118

Paenibacillus_phage(43.33%)

tail,terminase,bacteriocin,capsid,integrase,tRNA,plate,protease,transposase,portal

attL 3250371:3250388|attR 3307375:3307392

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024094745.1\|3210243_3211380_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.2e-88	46.4
WP_077995745.1\|3211385_3212480_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_023482764.1\|3212589_3213594_-	Holliday junction branch migration DNA helicase RuvB	NA	NA	NA	NA
WP_024094746.1\|3213621_3214242_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_024094747.1\|3214238_3214742_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_036657674.1\|3214896_3215574_-	hypothetical protein	NA	NA	NA	NA
WP_023482986.1\|3217945_3218824_-	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_077995747.1\|3218842_3219709_-	prephenate dehydratase	NA	NA	NA	NA
WP_104932745.1\|3219705_3220671_-	homoserine kinase	NA	NA	NA	NA
WP_077995748.1\|3220740_3221805_-	threonine synthase	NA	NA	NA	NA
WP_079940225.1\|3221829_3223116_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_042119159.1\|3223140_3223623_-	ACT domain-containing protein	NA	NA	NA	NA
WP_077995749.1\|3223828_3224335_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_104932746.1\|3224408_3225779_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_077995750.1\|3225817_3227119_-	GTPase ObgE	NA	NA	NA	NA
WP_077995751.1\|3227128_3227893_-	hypothetical protein	NA	NA	NA	NA
WP_024094757.1\|3228111_3228423_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_077995752.1\|3228428_3228776_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_023482975.1\|3228791_3229103_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_023482973.1\|3230011_3230887_-\|protease	membrane metalloprotease-like protein	NA	NA	NA	NA
WP_077995754.1\|3230879_3231794_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_079940228.1\|3231922_3233095_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_023482970.1\|3233107_3233902_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_023482969.1\|3233999_3234638_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_077995755.1\|3234707_3235238_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_023482967.1\|3235237_3236095_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_024094763.1\|3236137_3237169_-	rod shape-determining protein	NA	NA	NA	NA
WP_024094764.1\|3237235_3237925_-	JAB domain-containing protein	NA	NA	NA	NA
WP_024094765.1\|3238410_3238842_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_077995756.1\|3238922_3239519_-	septum formation protein Maf	NA	NA	NA	NA
WP_077995757.1\|3239588_3239831_-	DUF4321 domain-containing protein	NA	NA	NA	NA
WP_077997528.1\|3240081_3241224_+	hypothetical protein	A0A2H4JCM7	uncultured_Caudovirales_phage	2.9e-22	35.5
WP_024094768.1\|3241324_3242614_-	hypothetical protein	NA	NA	NA	NA
WP_077995759.1\|3242736_3244125_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_023484266.1\|3244132_3245506_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_079940786.1\|3245576_3248243_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	4.1e-168	41.4
WP_077995760.1\|3249035_3250187_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
3250371:3250388	attL	NA	NA	NA	NA
WP_079940229.1\|3250596_3250836_-	hypothetical protein	A0A0K2CYG5	Paenibacillus_phage	1.3e-20	66.7
WP_079940230.1\|3251450_3251789_+	hypothetical protein	NA	NA	NA	NA
WP_104932747.1\|3251927_3254498_-	hypothetical protein	A0A0K2CYN4	Paenibacillus_phage	3.5e-233	51.8
WP_079940232.1\|3256740_3257730_+	hypothetical protein	NA	NA	NA	NA
WP_079940233.1\|3257699_3258572_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_079940235.1\|3258970_3259453_-	SocA family protein	A0A0N9SGM1	Paenibacillus_phage	1.2e-25	41.3
WP_079940237.1\|3260654_3262373_-	DUF2326 domain-containing protein	NA	NA	NA	NA
WP_079940238.1\|3262363_3262591_-	hypothetical protein	NA	NA	NA	NA
WP_079940239.1\|3262577_3263561_-	SMEK domain-containing protein	NA	NA	NA	NA
WP_104932657.1\|3263983_3264853_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_036654509.1\|3264873_3265557_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_079940787.1\|3265717_3266353_-	hypothetical protein	NA	NA	NA	NA
WP_079940240.1\|3266387_3267104_-	hypothetical protein	NA	NA	NA	NA
WP_079940241.1\|3267239_3267482_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	7.3e-32	96.2
WP_036655918.1\|3268445_3268682_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	6.0e-31	98.6
WP_077996661.1\|3268995_3269286_-	hypothetical protein	E2ELK3	Clostridium_phage	1.5e-18	50.5
WP_077996660.1\|3269297_3269888_-	hypothetical protein	S5MNY5	Brevibacillus_phage	1.1e-12	24.9
WP_079940243.1\|3269891_3270170_-	hypothetical protein	NA	NA	NA	NA
WP_104932808.1\|3270166_3270730_-	DUF2313 domain-containing protein	S5MA71	Brevibacillus_phage	5.7e-35	46.4
WP_079940245.1\|3270740_3271817_-\|plate	baseplate J/gp47 family protein	A0A0K2CP27	Brevibacillus_phage	1.2e-102	53.3
WP_079940246.1\|3271809_3272220_-	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	1.2e-29	50.0
WP_079940247.1\|3272222_3272465_-	DUF2577 domain-containing protein	S6C459	Thermus_phage	3.1e-14	47.6
WP_079940248.1\|3272464_3273448_-	hypothetical protein	S5MA66	Brevibacillus_phage	2.6e-104	55.9
WP_079940249.1\|3273452_3274091_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	2.2e-51	49.5
WP_079940250.1\|3274087_3276205_-	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	1.2e-141	42.3
WP_023485206.1\|3276428_3276854_-	hypothetical protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
WP_079940251.1\|3276880_3277345_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	7.2e-52	62.7
WP_079940252.1\|3277346_3278678_-\|tail	phage tail sheath protein	A0A0K2CNL4	Brevibacillus_phage	2.9e-114	50.1
WP_155121029.1\|3278678_3278849_-	hypothetical protein	NA	NA	NA	NA
WP_079940253.1\|3278841_3279252_-	hypothetical protein	S5MUN8	Brevibacillus_phage	2.3e-25	45.2
WP_079940254.1\|3279248_3279659_-	HK97 gp10 family phage protein	A0A0A7RTT0	Clostridium_phage	2.1e-39	58.0
WP_079940789.1\|3279658_3279979_-	ABC transporter ATP-binding protein	S5M673	Brevibacillus_phage	6.5e-28	57.5
WP_079940255.1\|3280019_3280391_-	DNA-packaging protein	S5MP25	Brevibacillus_phage	1.3e-32	60.5
WP_079940256.1\|3280417_3280675_-	hypothetical protein	NA	NA	NA	NA
WP_079940257.1\|3280686_3281730_-\|capsid	phage capsid protein	A0A0K2CP76	Brevibacillus_phage	1.1e-172	87.0
WP_079940790.1\|3281745_3282105_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	3.6e-43	73.0
WP_079940258.1\|3282117_3282741_-	hypothetical protein	A0A0K2CP96	Brevibacillus_phage	2.4e-71	68.9
WP_079940259.1\|3282784_3283804_-\|capsid	minor capsid protein	S5MTV5	Brevibacillus_phage	2.6e-102	53.8
WP_104932722.1\|3283800_3285273_-\|portal	phage portal protein	A0A0K2CNK4	Brevibacillus_phage	3.5e-169	62.0
WP_079940260.1\|3285287_3286559_-\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.3e-164	66.0
WP_079940261.1\|3286551_3287292_-	hypothetical protein	A0A2H4J4R0	uncultured_Caudovirales_phage	2.1e-45	48.4
WP_155121030.1\|3287350_3287518_-	hypothetical protein	NA	NA	NA	NA
WP_162544753.1\|3287561_3287972_-	hypothetical protein	NA	NA	NA	NA
WP_079940792.1\|3287951_3288218_+	DUF3892 domain-containing protein	NA	NA	NA	NA
WP_079940263.1\|3288778_3289084_-	hypothetical protein	NA	NA	NA	NA
WP_079940264.1\|3289209_3289644_-	hypothetical protein	NA	NA	NA	NA
WP_079940265.1\|3289661_3290165_-	hypothetical protein	NA	NA	NA	NA
WP_079940266.1\|3290302_3290515_-	DUF2829 domain-containing protein	A0A1C8E971	Bacillus_phage	7.8e-30	87.0
WP_079940267.1\|3290575_3290926_-	hypothetical protein	A0A0K2CZA6	Paenibacillus_phage	6.2e-56	88.8
WP_155121032.1\|3290946_3291120_-	hypothetical protein	A0A0K2CZI7	Paenibacillus_phage	8.1e-17	77.2
WP_079940268.1\|3291338_3291542_-	hypothetical protein	A0A0K2CZA1	Paenibacillus_phage	1.9e-25	86.6
WP_104932809.1\|3291675_3292131_-	transcriptional regulator	A0A0C5AC66	Paenibacillus_phage	5.8e-54	73.0
WP_079940270.1\|3292281_3292722_-	hypothetical protein	NA	NA	NA	NA
WP_079940271.1\|3292714_3292939_-	hypothetical protein	A0A0K2CYJ4	Paenibacillus_phage	4.7e-17	60.3
WP_155121033.1\|3292990_3293155_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	3.6e-14	85.0
WP_079940793.1\|3293170_3293866_-	hypothetical protein	A0A1L2JY27	Aeribacillus_phage	2.8e-31	39.5
WP_079940272.1\|3293986_3295087_-	sigma-70 family RNA polymerase sigma factor	A0A2I7SC33	Paenibacillus_phage	6.5e-160	79.5
WP_079940273.1\|3295290_3295665_-	RusA family crossover junction endodeoxyribonuclease	A0A0K2CYQ8	Paenibacillus_phage	8.4e-43	65.0
WP_079940274.1\|3295666_3295876_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	5.5e-28	83.8
WP_079940275.1\|3295994_3296816_-	ATP-binding protein	A0A0K2CYM7	Paenibacillus_phage	1.9e-119	98.2
WP_079940276.1\|3296706_3297597_-	DnaD domain protein	A0A0K2CY85	Paenibacillus_phage	6.1e-124	86.1
WP_079940277.1\|3297645_3297978_-	hypothetical protein	A0A0K2CY25	Paenibacillus_phage	6.1e-53	91.8
WP_079940278.1\|3298002_3298404_-	single-stranded DNA-binding protein	A0A0K2CYR2	Paenibacillus_phage	3.0e-46	73.5
WP_079940279.1\|3298453_3299257_-	hypothetical protein	A0A0P0IZH9	Lactobacillus_phage	1.2e-46	40.0
WP_079940280.1\|3299219_3300110_-	hypothetical protein	A0A0A7S0A9	Clostridium_phage	6.8e-83	57.8
WP_155121034.1\|3300200_3300368_-	hypothetical protein	NA	NA	NA	NA
WP_079940282.1\|3300679_3301006_-	hypothetical protein	A0A0K2CYQ7	Paenibacillus_phage	9.8e-48	93.2
WP_079940283.1\|3301020_3301698_-	hypothetical protein	A0A2I7SCV5	Paenibacillus_phage	6.8e-59	83.1
WP_079940284.1\|3301694_3301883_-	hypothetical protein	NA	NA	NA	NA
WP_079940285.1\|3301918_3302227_-	hypothetical protein	NA	NA	NA	NA
WP_079940286.1\|3302223_3302979_-	phage repressor protein/antirepressor Ant	A0A0C5AEJ9	Bacteriophage	1.5e-107	76.5
WP_155121035.1\|3303015_3303180_-	hypothetical protein	NA	NA	NA	NA
WP_079940287.1\|3303326_3303587_-	hypothetical protein	R9W0P6	Paenibacillus_phage	5.6e-22	76.1
WP_079940288.1\|3303583_3303955_-	hypothetical protein	R9VW30	Paenibacillus_phage	1.5e-55	88.3
WP_079940289.1\|3303947_3304130_-	hypothetical protein	NA	NA	NA	NA
WP_079940290.1\|3304239_3304530_-	helix-turn-helix domain-containing protein	A0A0K2CZS5	Paenibacillus_phage	4.3e-39	85.3
WP_079940291.1\|3304776_3304986_-	helix-turn-helix transcriptional regulator	Q786F1	Bacillus_phage	6.3e-08	44.3
WP_023483881.1\|3305260_3305986_+	helix-turn-helix transcriptional regulator	Q786F1	Bacillus_phage	1.5e-11	42.2
WP_079940292.1\|3306053_3307283_+\|integrase	site-specific integrase	A0A0K2CZ62	Paenibacillus_phage	1.3e-180	75.6
WP_079940293.1\|3307355_3308189_-	RluA family pseudouridine synthase	NA	NA	NA	NA
3307375:3307392	attR	NA	NA	NA	NA
WP_077997530.1\|3309874_3310831_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	1.2e-32	34.6

DBSCAN-SWA_18

3321195 : 3454657

170

Paenibacillus_phage(42.06%)

tail,terminase,bacteriocin,capsid,integrase,tRNA,plate,coat,head,protease,transposase,portal

attL 3353761:3353779|attR 3409795:3409813

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079940295.1\|3321195_3322596_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_023484282.1\|3322767_3323301_-	hypothetical protein	NA	NA	NA	NA
WP_077995767.1\|3323438_3323840_-	adenosylmethionine decarboxylase	A0A0E3FA82	Synechococcus_phage	1.5e-18	36.4
WP_023484284.1\|3324212_3324800_-	hypothetical protein	NA	NA	NA	NA
WP_077995768.1\|3325190_3325805_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_083039125.1\|3325823_3328157_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	9.5e-169	41.5
WP_024094788.1\|3328306_3330025_-\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	4.7e-16	24.7
WP_104932751.1\|3330240_3330948_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_077995769.1\|3330998_3332120_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_077995770.1\|3332224_3333487_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.9e-149	65.0
WP_024094790.1\|3333502_3334093_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.2e-57	56.6
WP_104932752.1\|3334257_3335559_-	trigger factor	NA	NA	NA	NA
WP_046655164.1\|3335738_3336641_-	hypothetical protein	NA	NA	NA	NA
WP_079940297.1\|3336771_3337992_-	CapA family protein	A0A2H4J5Z6	uncultured_Caudovirales_phage	1.3e-55	34.2
WP_024094793.1\|3338218_3338332_-	DUF4023 family protein	NA	NA	NA	NA
WP_158672797.1\|3338386_3339892_-	PH domain-containing protein	NA	NA	NA	NA
WP_077995775.1\|3339884_3340361_-	PH domain-containing protein	NA	NA	NA	NA
WP_024094796.1\|3340527_3340881_-	hypothetical protein	NA	NA	NA	NA
WP_024094797.1\|3341169_3343014_+	asparagine synthase (glutamine-hydrolyzing)	L7RC73	Acanthamoeba_polyphaga_moumouvirus	5.8e-28	24.7
WP_079940299.1\|3343081_3343714_-	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_024094798.1\|3343700_3344456_-	ribonuclease PH	NA	NA	NA	NA
WP_079940300.1\|3344766_3345798_-	hypothetical protein	NA	NA	NA	NA
WP_036656345.1\|3346034_3346550_+	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	8.5e-38	53.6
WP_077995776.1\|3346661_3347471_+	MFS transporter	NA	NA	NA	NA
WP_104932621.1\|3347708_3348578_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3348598_3349282_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932668.1\|3349534_3350651_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.6e-153	99.3
WP_077995777.1\|3350804_3351119_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_023485249.1\|3351118_3351460_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_024094809.1\|3351527_3352109_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_079940351.1\|3352464_3352926_+	hypothetical protein	A0A2I7SC09	Paenibacillus_phage	2.1e-35	47.0
WP_079940352.1\|3352965_3353169_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	1.6e-16	65.7
3353761:3353779	attL	NA	NA	NA	NA
WP_079940353.1\|3354582_3354822_-\|transposase	transposase	A0A2I7SDD6	Paenibacillus_phage	1.6e-31	93.7
WP_079940354.1\|3355755_3355992_-\|bacteriocin	bacteriocin biosynthesis protein	A0A0K2CZB4	Paenibacillus_phage	1.0e-30	100.0
WP_024094416.1\|3356027_3356186_-	hypothetical protein	NA	NA	NA	NA
WP_077995811.1\|3356178_3356574_-	hypothetical protein	NA	NA	NA	NA
WP_079940355.1\|3356586_3357954_-	kelch-like protein	S5MNY5	Brevibacillus_phage	2.4e-10	38.5
WP_079940243.1\|3357957_3358236_-	hypothetical protein	NA	NA	NA	NA
WP_104932808.1\|3358232_3358796_-	DUF2313 domain-containing protein	S5MA71	Brevibacillus_phage	5.7e-35	46.4
WP_079940357.1\|3358806_3359883_-\|plate	baseplate J/gp47 family protein	A0A0K2CP27	Brevibacillus_phage	1.6e-102	53.5
WP_079940358.1\|3359875_3360286_-	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	1.4e-27	47.8
WP_079940359.1\|3360288_3360531_-	DUF2577 domain-containing protein	S5MC71	Brevibacillus_phage	1.1e-11	35.9
WP_079940360.1\|3360530_3361514_-	hypothetical protein	S5MNC9	Brevibacillus_phage	7.7e-104	55.3
WP_079940361.1\|3361518_3362157_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	9.9e-52	50.5
WP_079940362.1\|3362153_3364262_-	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	3.3e-144	43.0
WP_077995249.1\|3364382_3365603_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_079940363.1\|3365681_3366323_-	hypothetical protein	S5MUN3	Brevibacillus_phage	1.1e-34	41.2
WP_079940364.1\|3366561_3366987_-\|portal	phage portal protein	X5JAB6	Clostridium_phage	1.6e-26	44.8
WP_079940365.1\|3367010_3367478_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	4.2e-52	64.3
WP_079940366.1\|3367479_3368811_-\|tail	phage tail sheath protein	A0A0K2CNL4	Brevibacillus_phage	6.5e-114	49.9
WP_155121029.1\|3368811_3368982_-	hypothetical protein	NA	NA	NA	NA
WP_079940367.1\|3368974_3369385_-	hypothetical protein	S5MUN8	Brevibacillus_phage	8.3e-28	47.6
WP_079940368.1\|3369381_3369789_-	HK97 gp10 family phage protein	S5MNW5	Brevibacillus_phage	2.6e-37	60.3
WP_079940803.1\|3369788_3370109_-	ABC transporter ATP-binding protein	S5M673	Brevibacillus_phage	2.5e-27	56.6
WP_079940369.1\|3370149_3370518_-	DNA-packaging protein	S5MP25	Brevibacillus_phage	1.5e-28	51.7
WP_079940370.1\|3370504_3371515_-\|coat	coat protein	D2J006	Enterococcus_phage	2.2e-114	65.6
WP_079940371.1\|3371532_3372174_-	hypothetical protein	A0A0K2CP96	Brevibacillus_phage	1.5e-63	71.8
WP_079940372.1\|3372214_3373234_-\|capsid	minor capsid protein	S5M601	Brevibacillus_phage	2.9e-106	55.5
WP_104932812.1\|3373230_3374670_-\|portal	phage portal protein	S5MNW1	Brevibacillus_phage	9.1e-170	62.1
WP_079940374.1\|3374677_3375931_-\|terminase	PBSX family phage terminase large subunit	A0A0K2CP71	Brevibacillus_phage	2.8e-199	79.7
WP_079940375.1\|3375917_3376355_-\|terminase	terminase small subunit	S6B9Y6	Thermus_phage	1.3e-47	63.9
WP_155121047.1\|3376404_3376572_-	hypothetical protein	NA	NA	NA	NA
WP_155121048.1\|3376605_3376779_-	hypothetical protein	A0A0C5AJR9	Paenibacillus_phage	3.3e-10	78.0
WP_104932753.1\|3376997_3377627_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_077995927.1\|3377586_3377826_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	9.8e-21	75.4
WP_079940378.1\|3377943_3379056_-	sigma-70 family RNA polymerase sigma factor	A0A0K2CZU8	Paenibacillus_phage	1.2e-161	80.3
WP_079940379.1\|3379239_3379461_-	hypothetical protein	A0A0K2CZG3	Paenibacillus_phage	2.1e-33	93.2
WP_079940380.1\|3379465_3379870_-	RusA family crossover junction endodeoxyribonuclease	A0A2I7SC39	Paenibacillus_phage	3.9e-70	96.2
WP_079940381.1\|3379850_3380435_-	hypothetical protein	K7Z7Q9	Megavirus	1.8e-28	39.9
WP_079940382.1\|3380830_3381160_-	hypothetical protein	A0A0C5JZC6	Enterococcus_phage	3.3e-11	49.3
WP_079940383.1\|3381165_3383379_-	AAA family ATPase	A0A2I7SC35	Paenibacillus_phage	0.0e+00	93.2
WP_079940384.1\|3383728_3383893_-	DUF3797 domain-containing protein	A0A0K2CZU3	Paenibacillus_phage	8.7e-21	95.6
WP_079940385.1\|3383902_3385483_-	DEAD/DEAH box helicase	A0A0K2CZF8	Paenibacillus_phage	6.9e-296	97.3
WP_079940386.1\|3385492_3386002_-	hypothetical protein	A0A0K2CZ91	Paenibacillus_phage	4.6e-84	92.9
WP_079940387.1\|3386023_3387103_-	ATP-binding protein	A0A0K2CZH1	Paenibacillus_phage	1.2e-174	84.4
WP_079940388.1\|3387102_3388413_-	AAA family ATPase	A0A2I7SC23	Paenibacillus_phage	8.5e-175	81.2
WP_079940389.1\|3388478_3389189_-	hypothetical protein	A0A2I7SC22	Paenibacillus_phage	7.5e-125	98.3
WP_079940390.1\|3389225_3389597_-	hypothetical protein	A0A0K2CZF3	Paenibacillus_phage	5.3e-58	95.9
WP_079940391.1\|3389664_3389865_-	hypothetical protein	NA	NA	NA	NA
WP_079940392.1\|3389885_3390107_-	hypothetical protein	A0A0K2CZM7	Paenibacillus_phage	5.7e-23	69.9
WP_079940393.1\|3390146_3390422_-	hypothetical protein	A0A0N9RRC2	Paenibacillus_phage	3.4e-25	89.0
WP_079940394.1\|3390697_3390964_-	hypothetical protein	NA	NA	NA	NA
WP_079940395.1\|3390965_3391199_-	hypothetical protein	NA	NA	NA	NA
WP_079940396.1\|3391337_3391589_-	hypothetical protein	R9W0P6	Paenibacillus_phage	1.9e-22	72.2
WP_155121049.1\|3391589_3391844_-	hypothetical protein	NA	NA	NA	NA
WP_079940398.1\|3391873_3392167_-	helix-turn-helix domain-containing protein	A0A2I7SC15	Paenibacillus_phage	1.4e-40	86.6
WP_079940399.1\|3392163_3392901_-	phage antirepressor Ant	A0A2I7SC24	Paenibacillus_phage	2.7e-130	92.7
WP_079940400.1\|3392918_3393548_-	hypothetical protein	NA	NA	NA	NA
WP_079940401.1\|3393765_3393957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_079940402.1\|3394082_3394499_+	helix-turn-helix transcriptional regulator	R9W020	Paenibacillus_phage	8.4e-44	76.4
WP_158672798.1\|3394479_3395508_+	ImmA/IrrE family metallo-endopeptidase	A0A0F6N3H6	Staphylococcus_phage	1.2e-06	30.6
WP_079940404.1\|3395606_3396842_+\|integrase	site-specific integrase	A0A0K2CZ62	Paenibacillus_phage	1.4e-232	96.6
WP_079940405.1\|3397099_3398083_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_077995778.1\|3398092_3398827_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_079940804.1\|3399329_3400274_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_077995780.1\|3401090_3401549_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_155121050.1\|3401675_3402038_-	hypothetical protein	NA	NA	NA	NA
WP_162544755.1\|3402057_3402225_-	hypothetical protein	NA	NA	NA	NA
WP_104932754.1\|3402155_3402350_-\|transposase	transposase	NA	NA	NA	NA
WP_079940407.1\|3402863_3406460_+	hypothetical protein	A0A126FC74	Lonomia_obliqua_multiple_nucleopolyhedrovirus	2.8e-42	25.6
WP_077995782.1\|3406532_3407102_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_079940408.1\|3407610_3408516_+\|integrase	tyrosine-type recombinase/integrase	A0A0A7AR08	Bacillus_phage	3.4e-90	57.2
WP_023483458.1\|3408925_3409132_+	cold-shock protein	Q9AZD3	Lactococcus_phage	4.6e-19	64.6
WP_036656232.1\|3409232_3409511_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	7.2e-07	38.3
WP_023482516.1\|3410175_3410814_+	hemolysin III family protein	NA	NA	NA	NA
3409795:3409813	attR	NA	NA	NA	NA
WP_077995375.1\|3412126_3413350_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077995783.1\|3414158_3415721_-	recombinase family protein	A0A0C5AJM7	Paenibacillus_phage	5.6e-290	98.5
WP_144029589.1\|3415659_3415908_-	hypothetical protein	A0A0C5AF76	Paenibacillus_phage	9.8e-40	98.8
WP_077995784.1\|3415952_3416411_-	transcriptional regulator	A0A0C5AC66	Paenibacillus_phage	5.4e-76	96.7
WP_077995785.1\|3416461_3416920_-	hypothetical protein	A0A2I7SCC0	Paenibacillus_phage	2.7e-75	98.0
WP_104932755.1\|3417078_3417666_-	hypothetical protein	A0A0C5ABQ1	Bacteriophage	4.7e-101	93.8
WP_077995787.1\|3417662_3417875_-	hypothetical protein	R9VYB7	Paenibacillus_phage	8.3e-32	85.7
WP_077995788.1\|3417982_3418174_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	3.4e-16	80.0
WP_077995789.1\|3418223_3418589_-	helix-turn-helix transcriptional regulator	R9W020	Paenibacillus_phage	9.9e-57	95.8
WP_155116288.1\|3418635_3418785_-	hypothetical protein	R9W0Q6	Paenibacillus_phage	5.0e-23	100.0
WP_077995790.1\|3418799_3419105_-	hypothetical protein	A0A0C5AEC7	Paenibacillus_phage	4.9e-49	91.1
WP_077997534.1\|3419107_3420430_-	AAA family ATPase	A0A0K2CY23	Paenibacillus_phage	2.4e-246	98.6
WP_149867712.1\|3420395_3421064_-	hypothetical protein	A0A2I7SDJ4	Paenibacillus_phage	1.9e-122	98.6
WP_023483155.1\|3421245_3421560_-	hypothetical protein	A0A0C5AEL1	Paenibacillus_phage	2.0e-37	100.0
WP_077995791.1\|3421556_3422315_-	MBL fold metallo-hydrolase	A0A0B5A2C7	Paenibacillus_phage	1.5e-139	94.8
WP_077995792.1\|3422327_3423242_-	recombinase RecT	A0A0C5AEK7	Bacteriophage	8.9e-147	85.9
WP_077995793.1\|3423244_3423442_-	hypothetical protein	A0A0C5AN67	Paenibacillus_phage	8.0e-29	93.8
WP_077995794.1\|3423438_3424959_-	AAA family ATPase	A0A0C5AN14	Bacteriophage	8.5e-227	83.9
WP_077995795.1\|3424942_3425236_-	hypothetical protein	A0A0C5AJQ8	Paenibacillus_phage	3.8e-43	95.9
WP_077995796.1\|3425240_3425501_-	hypothetical protein	A0A0C5AN52	Paenibacillus_phage	5.5e-25	64.4
WP_077995797.1\|3425536_3425947_-	hypothetical protein	NA	NA	NA	NA
WP_077995798.1\|3426108_3426342_-	hypothetical protein	A0A0C5AN13	Bacteriophage	4.9e-33	88.3
WP_077995799.1\|3426338_3426581_-	hypothetical protein	A0A0C5AER7	Bacteriophage	2.0e-29	78.9
WP_155121051.1\|3426677_3426854_+	hypothetical protein	NA	NA	NA	NA
WP_077995800.1\|3426837_3427110_-	hypothetical protein	A0A0C5AEJ1	Bacteriophage	3.6e-43	95.5
WP_077995801.1\|3427136_3427877_-	phage antirepressor protein	A0A2I7SDG8	Paenibacillus_phage	8.9e-129	97.2
WP_155121052.1\|3427905_3428049_-	hypothetical protein	A0A2I7SCU1	Paenibacillus_phage	2.7e-18	95.7
WP_077995803.1\|3428246_3428465_-	helix-turn-helix transcriptional regulator	A0A0C5AMZ9	Paenibacillus_phage	5.6e-31	95.7
WP_077995804.1\|3428682_3429129_+	helix-turn-helix transcriptional regulator	A0A0C5AN12	Bacteriophage	1.3e-71	96.6
WP_077995805.1\|3429702_3429906_+	YqaE/Pmp3 family membrane protein	A0A0C5AJ71	Bacteriophage	6.3e-29	100.0
WP_077995806.1\|3430002_3430233_-	helix-turn-helix transcriptional regulator	A0A0C5ABM0	Bacteriophage	3.0e-35	96.0
WP_077995807.1\|3430708_3430900_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	1.1e-25	96.6
WP_079940409.1\|3430896_3431163_+	hypothetical protein	A0A2I7SC25	Paenibacillus_phage	8.0e-32	84.3
WP_079940410.1\|3431166_3431373_+	hypothetical protein	A0A2I7SC04	Paenibacillus_phage	4.2e-28	89.7
WP_077995809.1\|3431464_3431707_-\|transposase	transposase	A0A0C5AEQ4	Bacteriophage	7.6e-29	96.2
WP_077997536.1\|3431959_3432631_-	hypothetical protein	A0A2I7SC18	Paenibacillus_phage	6.8e-128	93.3
WP_077995810.1\|3432630_3432870_-\|bacteriocin	bacteriocin biosynthesis protein	R9W0N4	Paenibacillus_phage	3.1e-35	96.2
WP_024094416.1\|3432905_3433064_-	hypothetical protein	NA	NA	NA	NA
WP_077995811.1\|3433056_3433452_-	hypothetical protein	NA	NA	NA	NA
WP_077995812.1\|3433464_3435249_-	hypothetical protein	A0A0C5AEQ0	Bacteriophage	2.3e-69	90.6
WP_079940411.1\|3435249_3435813_-\|tail	phage tail protein I	A0A0C5AJ63	Bacteriophage	1.9e-91	91.4
WP_079940805.1\|3435809_3436919_-\|plate	baseplate J/gp47 family protein	A0A0C5AEG2	Bacteriophage	1.6e-203	99.7
WP_077995813.1\|3436930_3437257_-	hypothetical protein	A0A0C5ABJ8	Bacteriophage	7.3e-51	98.1
WP_077995814.1\|3437246_3437648_-\|tail	phage tail protein	A0A0C5AN08	Bacteriophage	1.0e-70	95.5
WP_079940412.1\|3437644_3438022_-	hypothetical protein	A0A0C5AEP6	Bacteriophage	1.6e-57	90.4
WP_077995816.1\|3438024_3439053_-	late control protein	A0A0C5AJ59	Bacteriophage	1.3e-186	91.8
WP_079940413.1\|3439255_3441751_-	tape measure protein	A0A0C5ABJ2	Bacteriophage	0.0e+00	84.4
WP_077995821.1\|3441910_3442246_-\|tail	phage tail assembly protein	A0A0C5AEP1	Bacteriophage	6.8e-44	85.0
WP_077995822.1\|3442273_3442792_-\|tail	phage major tail tube protein	A0A0C5AJ56	Bacteriophage	9.4e-85	94.8
WP_077995823.1\|3442804_3444247_-\|tail	phage tail protein	A0A0C5AEE8	Bacteriophage	3.5e-262	92.1
WP_077995824.1\|3444250_3444523_-	hypothetical protein	A0A0C5ABI6	Bacteriophage	1.4e-42	95.6
WP_077995825.1\|3444519_3444987_-	hypothetical protein	A0A0C5AN06	Bacteriophage	2.3e-82	97.4
WP_077995826.1\|3444983_3445535_-	hypothetical protein	A0A0C5AEN6	Bacteriophage	3.1e-94	98.9
WP_077995827.1\|3445531_3445843_-	hypothetical protein	A0A0C5AJ53	Bacteriophage	4.8e-52	100.0
WP_155121053.1\|3445839_3445989_-	hypothetical protein	A0A0C5AEE3	Bacteriophage	3.0e-20	100.0
WP_077995828.1\|3446002_3447031_-\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	1.7e-194	99.4
WP_077995829.1\|3447046_3447403_-\|head	head decoration protein	A0A0C5AN05	Bacteriophage	6.3e-56	97.5
WP_079940414.1\|3447399_3448521_-\|protease	Clp protease ClpP	A0A0C5AEN1	Bacteriophage	6.7e-205	98.4
WP_077995832.1\|3448480_3450040_-\|portal	phage portal protein	A0A0C5AJ48	Bacteriophage	9.2e-293	96.3
WP_077995833.1\|3450036_3450258_-	hypothetical protein	A0A0C5AEE0	Bacteriophage	1.8e-29	89.0
WP_077995834.1\|3450274_3452137_-\|terminase	phage terminase large subunit family protein	A0A0C5ABH4	Bacteriophage	0.0e+00	98.7
WP_077995835.1\|3452120_3452633_-	hypothetical protein	A0A0C5AN04	Bacteriophage	3.4e-71	84.0
WP_036654551.1\|3453780_3453984_+	type II toxin-antitoxin system HicA family toxin	A0A0C5AC70	Paenibacillus_phage	1.5e-33	100.0
WP_077995836.1\|3454014_3454425_+	pilus assembly protein HicB	A0A0C5AEN7	Bacteriophage	7.2e-72	98.5
WP_077995837.1\|3454453_3454657_-	hypothetical protein	A0A0C5ABQ7	Bacteriophage	5.2e-31	98.5

DBSCAN-SWA_19

3560009 : 3619449

Paenibacillus_phage(60.78%)

tail,holin,terminase,capsid,integrase,tRNA,coat,transposase,portal

attL 3579035:3579051|attR 3619457:3619473

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104932657.1\|3560009_3560879_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_024094875.1\|3561027_3561708_-	LrgB family protein	NA	NA	NA	NA
WP_023483267.1\|3561704_3562076_-\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_036654876.1\|3562198_3563092_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_104932764.1\|3563467_3564025_-	hypothetical protein	NA	NA	NA	NA
WP_077995895.1\|3564135_3565284_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_077995896.1\|3565311_3565551_-	hypothetical protein	NA	NA	NA	NA
WP_155116295.1\|3565573_3565726_-	hypothetical protein	NA	NA	NA	NA
WP_023483263.1\|3565844_3566987_+	MFS transporter	NA	NA	NA	NA
WP_077995897.1\|3567186_3567537_+	DNA primase	NA	NA	NA	NA
WP_077995898.1\|3567538_3568180_-	SCO family protein	NA	NA	NA	NA
WP_096761322.1\|3568270_3569197_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_024094881.1\|3569441_3571454_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.2e-11	24.3
WP_023483257.1\|3572061_3572541_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_077995899.1\|3572579_3572858_-	hypothetical protein	NA	NA	NA	NA
WP_036654885.1\|3572945_3573929_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_023483255.1\|3574065_3574290_-	alpha/beta-type small acid-soluble spore protein	A0A1P8CX76	Bacillus_phage	5.6e-10	47.8
WP_042119744.1\|3574416_3574602_+	DUF5325 family protein	NA	NA	NA	NA
WP_036654887.1\|3574794_3575781_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_077995900.1\|3576159_3577623_-	cobyrinate a,c-diamide synthase	NA	NA	NA	NA
WP_036654889.1\|3577790_3578429_-	ribonuclease H	NA	NA	NA	NA
3579035:3579051	attL	NA	NA	NA	NA
WP_077995901.1\|3579170_3579557_+	DUF3862 domain-containing protein	NA	NA	NA	NA
WP_077584997.1\|3579768_3579855_-\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
WP_158672803.1\|3579950_3580178_-	helix-turn-helix transcriptional regulator	A0A0K2CYV5	Paenibacillus_phage	3.0e-27	85.1
WP_077995903.1\|3580647_3580833_+	hypothetical protein	A0A0K2CZ26	Paenibacillus_phage	3.6e-23	82.0
WP_077995904.1\|3580918_3581182_+	hypothetical protein	A0A0K2CYM1	Paenibacillus_phage	1.4e-41	97.7
WP_104932621.1\|3581310_3582180_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	3.0e-136	100.0
WP_036654509.1\|3582200_3582884_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_104932814.1\|3583036_3583672_-	hypothetical protein	NA	NA	NA	NA
WP_077995908.1\|3583706_3584423_-	hypothetical protein	NA	NA	NA	NA
WP_077995909.1\|3584558_3584801_-\|transposase	transposase	A0A2I7SCT4	Paenibacillus_phage	1.1e-32	96.2
WP_077997545.1\|3584810_3585479_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A2I7SD00	Paenibacillus_phage	2.5e-130	96.4
WP_024094328.1\|3585478_3585718_-	hypothetical protein	A0A0C5AEG8	Bacteriophage	2.8e-36	100.0
WP_077995910.1\|3585897_3586230_-	hypothetical protein	A0A2I7SBZ3	Paenibacillus_phage	8.2e-50	87.2
WP_077995911.1\|3586239_3586992_-	hypothetical protein	A0A0K2CZJ3	Paenibacillus_phage	4.8e-82	98.0
WP_077995912.1\|3586994_3588467_-	hypothetical protein	A0A1B2APX2	Phage_Wrath	1.2e-124	53.9
WP_077995913.1\|3588466_3589168_-	hypothetical protein	A0A1B2APY0	Phage_Wrath	2.9e-44	42.1
WP_155121055.1\|3589170_3590514_-	hypothetical protein	A0A097PAU2	Streptococcus_pyogenes_phage	1.3e-16	65.1
WP_077995249.1\|3590662_3591883_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077995915.1\|3591941_3593738_-	tape measure protein	M1IEW1	Bacillus_virus	1.3e-53	39.8
WP_104932815.1\|3593758_3594058_-	phenylalanine racemase	A0A097PAX1	Streptococcus_pyogenes_phage	3.7e-17	47.4
WP_077997546.1\|3594171_3594474_-	segregation and condensation protein B	NA	NA	NA	NA
WP_077995917.1\|3594476_3594995_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.0e-51	71.6
WP_077995918.1\|3595008_3595419_-	DUF5072 family protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.7e-33	44.1
WP_036658585.1\|3595423_3595759_-	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	2.4e-09	37.2
WP_077995919.1\|3595764_3596070_-	hypothetical protein	NA	NA	NA	NA
WP_077995920.1\|3596066_3596387_-	hypothetical protein	NA	NA	NA	NA
WP_077995921.1\|3596389_3596938_-	hypothetical protein	A7J297	Streptococcus_phage	7.2e-35	49.2
WP_077995249.1\|3597016_3598237_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.8e-57	53.5
WP_077995922.1\|3598278_3598644_-	hypothetical protein	A7J297	Streptococcus_phage	1.2e-25	55.3
WP_077995923.1\|3598656_3599247_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_077995924.1\|3599333_3600227_-\|capsid	minor capsid protein	S5MTV5	Brevibacillus_phage	8.7e-38	33.9
WP_077995925.1\|3600135_3601548_-\|portal	phage portal protein	A0A1P8BLJ1	Lactococcus_phage	7.4e-116	49.3
WP_077997547.1\|3601548_3602967_-\|terminase	phage terminase large subunit	A0A090EUA8	Clostridium_phage	2.9e-189	69.4
WP_077997548.1\|3602962_3603460_-\|transposase	transposase	A0A0E3U2Q7	Fusobacterium_phage	6.7e-40	65.2
WP_077995926.1\|3603675_3604299_-	RNA polymerase subunit sigma-24	NA	NA	NA	NA
WP_077995927.1\|3604264_3604504_-	hypothetical protein	A0A0K2CZP1	Paenibacillus_phage	9.8e-21	75.4
WP_158672804.1\|3604621_3605725_-	sigma-70 family RNA polymerase sigma factor	A0A2I7SC33	Paenibacillus_phage	4.2e-183	89.6
WP_077995929.1\|3605741_3605963_-	hypothetical protein	A0A0K2CZG3	Paenibacillus_phage	5.5e-34	94.5
WP_077995930.1\|3605966_3606362_-	RusA family crossover junction endodeoxyribonuclease	A0A2I7SC39	Paenibacillus_phage	6.9e-72	97.7
WP_079940424.1\|3606351_3606630_-	hypothetical protein	A0A0K2CZH7	Paenibacillus_phage	1.4e-47	98.9
WP_077995932.1\|3606916_3609169_-	AAA family ATPase	A0A2I7SC35	Paenibacillus_phage	0.0e+00	99.9
WP_077995933.1\|3609173_3609503_-	hypothetical protein	A0A2I7SC50	Paenibacillus_phage	1.9e-62	99.1
WP_077995934.1\|3609499_3611089_-	DEAD/DEAH box helicase	A0A2I7SC38	Paenibacillus_phage	1.4e-301	98.9
WP_023485397.1\|3611098_3611599_-	hypothetical protein	A0A2I7SC41	Paenibacillus_phage	3.1e-93	100.0
WP_104932765.1\|3611623_3612322_-	hypothetical protein	A0A2I7SC26	Paenibacillus_phage	5.2e-139	99.6
WP_077995935.1\|3612353_3613457_-	ATP-binding protein	A0A2I7SC30	Paenibacillus_phage	7.6e-209	99.2
WP_077995936.1\|3613456_3614767_-	AAA family ATPase	A0A2I7SC23	Paenibacillus_phage	2.5e-174	76.4
WP_104932766.1\|3614827_3615538_-	hypothetical protein	A0A2I7SC22	Paenibacillus_phage	3.3e-125	98.7
WP_023484471.1\|3615587_3615959_-	hypothetical protein	A0A2I7SC29	Paenibacillus_phage	3.4e-60	100.0
WP_051427850.1\|3615988_3616273_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.8e-48	100.0
WP_079940425.1\|3616276_3616510_-	hypothetical protein	A0A0K2CZM7	Paenibacillus_phage	4.3e-21	84.1
WP_077995939.1\|3616525_3616780_-	hypothetical protein	A0A0K2CYH1	Paenibacillus_phage	2.8e-10	43.4
WP_077995940.1\|3616751_3616973_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_077995941.1\|3617057_3617300_-	helix-turn-helix transcriptional regulator	A0A0K2CZL1	Paenibacillus_phage	2.4e-22	69.3
WP_077995942.1\|3617424_3617757_+	helix-turn-helix transcriptional regulator	A0A0K2CZS1	Paenibacillus_phage	2.7e-16	55.8
WP_077995943.1\|3617766_3618228_+	ImmA/IrrE family metallo-endopeptidase	R9TQI1	Paenibacillus_phage	8.7e-50	64.1
WP_077995944.1\|3618309_3619449_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	4.2e-61	39.6
3619457:3619473	attR	NA	NA	NA	NA

DBSCAN-SWA_20

3698484 : 3822971

108

Paenibacillus_phage(21.43%)

protease,transposase,holin,integrase

attL 3700350:3700364|attR 3830218:3830232

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077995988.1\|3698484_3699030_-\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	7.0e-22	37.4
WP_079940438.1\|3699463_3700168_-	copper homeostasis protein CutC	NA	NA	NA	NA
3700350:3700364	attL	NA	NA	NA	NA
WP_077995989.1\|3700723_3703951_+	lantibiotic dehydratase	A0A2H4PQG8	Staphylococcus_phage	1.1e-77	24.4
3700350:3700364	attL	NA	NA	NA	NA
WP_158672808.1\|3703943_3705299_+	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_077995991.1\|3705587_3706904_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_077995992.1\|3707192_3708176_-	hypothetical protein	NA	NA	NA	NA
WP_079940439.1\|3708523_3710542_-	sodium:proton antiporter	NA	NA	NA	NA
WP_036658223.1\|3710581_3710860_-	hypothetical protein	NA	NA	NA	NA
WP_077995995.1\|3711655_3712453_-	hypothetical protein	NA	NA	NA	NA
WP_024094946.1\|3712670_3714128_+	cardiolipin synthase	NA	NA	NA	NA
WP_149867718.1\|3714321_3715350_-	hypothetical protein	NA	NA	NA	NA
WP_158672809.1\|3715652_3716042_+	hypothetical protein	NA	NA	NA	NA
WP_077997553.1\|3716017_3716770_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_077995998.1\|3716866_3718060_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_036658210.1\|3718085_3719645_-	PTS maltose transporter subunit IICB	NA	NA	NA	NA
WP_024094951.1\|3720410_3720659_+	hypothetical protein	NA	NA	NA	NA
WP_036658206.1\|3720665_3720929_+	hypothetical protein	NA	NA	NA	NA
WP_024094953.1\|3721112_3722054_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_023484418.1\|3722235_3722850_+	DUF3298 and DUF4163 domain-containing protein	NA	NA	NA	NA
WP_077997554.1\|3723072_3724263_-	MFS transporter	NA	NA	NA	NA
WP_023484416.1\|3724298_3724988_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_149867719.1\|3725187_3725502_-	hypothetical protein	NA	NA	NA	NA
WP_077996002.1\|3725953_3727225_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-09	27.0
WP_077996004.1\|3727463_3727958_-	DUF4261 domain-containing protein	NA	NA	NA	NA
WP_077996005.1\|3728320_3728851_+	lysoplasmalogenase	NA	NA	NA	NA
WP_149867720.1\|3728845_3729610_-	HAD family hydrolase	NA	NA	NA	NA
WP_104932770.1\|3729880_3730621_-	hypothetical protein	NA	NA	NA	NA
WP_077996008.1\|3730802_3731027_+	hypothetical protein	NA	NA	NA	NA
WP_077996009.1\|3731125_3731740_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_077996010.1\|3731771_3733688_-	AAA family ATPase	Q331U3	Clostridium_botulinum_C_phage	3.2e-05	35.2
WP_077996011.1\|3733947_3735234_+	MFS transporter	NA	NA	NA	NA
WP_077996012.1\|3735461_3735794_-	hypothetical protein	NA	NA	NA	NA
WP_036658190.1\|3736112_3736382_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_077997555.1\|3736414_3736708_+	mRNA-degrading endonuclease	NA	NA	NA	NA
WP_023483432.1\|3736959_3737250_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077996013.1\|3737246_3739757_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_036658187.1\|3739861_3740158_+	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|3741260_3742484_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996014.1\|3742639_3744088_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.2e-123	48.9
WP_023483464.1\|3744222_3744609_-	DUF1878 family protein	NA	NA	NA	NA
WP_077996015.1\|3744630_3745089_-	hypothetical protein	NA	NA	NA	NA
WP_155121056.1\|3745780_3745930_-	hypothetical protein	NA	NA	NA	NA
WP_149867721.1\|3745919_3747128_-	DNA-binding protein	A0A0K2CP77	Brevibacillus_phage	1.7e-68	36.5
WP_077996017.1\|3747375_3747537_-\|transposase	transposase	NA	NA	NA	NA
WP_155121057.1\|3748001_3748154_-	hypothetical protein	NA	NA	NA	NA
WP_077996018.1\|3748143_3748752_-	hypothetical protein	A0A0K2CP77	Brevibacillus_phage	1.1e-31	34.5
WP_077996019.1\|3748794_3749499_-	hypothetical protein	NA	NA	NA	NA
WP_077996021.1\|3750444_3750885_+	hypothetical protein	NA	NA	NA	NA
WP_077996022.1\|3751017_3751389_-	3'-5' exonuclease	A2I2Z6	Vibrio_virus	1.8e-13	42.0
WP_077996023.1\|3751656_3751956_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_104932771.1\|3751989_3752223_-	hypothetical protein	NA	NA	NA	NA
WP_155121058.1\|3752209_3752560_-	hypothetical protein	NA	NA	NA	NA
WP_077996025.1\|3752860_3754390_-	alkyl hydroperoxide reductase subunit F	A0A2I2L5E1	Orpheovirus	5.7e-37	32.4
WP_042118705.1\|3754401_3754965_-	peroxiredoxin	NA	NA	NA	NA
WP_036658506.1\|3755108_3755273_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_077996026.1\|3755289_3757278_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_036658128.1\|3757274_3757502_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_077996027.1\|3759081_3760239_+	MFS transporter	NA	NA	NA	NA
3759158:3759172	attR	NA	NA	NA	NA
WP_036658123.1\|3760497_3761010_+\|transposase	IS630 family transposase	NA	NA	NA	NA
3759158:3759172	attR	NA	NA	NA	NA
WP_083039549.1\|3761006_3761300_+	hypothetical protein	NA	NA	NA	NA
WP_077997556.1\|3761443_3762367_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.4e-30	32.6
WP_077996029.1\|3762881_3763244_-	hypothetical protein	A0A2I7SCG2	Paenibacillus_phage	9.9e-49	80.0
WP_104932772.1\|3763258_3763708_-	hypothetical protein	A0A2I7SCF1	Paenibacillus_phage	5.0e-58	80.8
WP_077996030.1\|3764288_3765263_+	hypothetical protein	NA	NA	NA	NA
WP_077996031.1\|3765214_3766030_+	S8 family peptidase	A0A127AWU5	Bacillus_phage	1.1e-36	37.4
WP_079940442.1\|3766274_3767540_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|3767572_3768796_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077997558.1\|3768910_3769099_-	hypothetical protein	A0A1V0E026	Clostridioides_phage	6.5e-12	58.9
WP_051428085.1\|3769082_3769274_-	hypothetical protein	NA	NA	NA	NA
WP_077996034.1\|3769326_3770073_-	hypothetical protein	Q331X8	Clostridium_botulinum_C_phage	1.7e-31	40.9
WP_079940443.1\|3770339_3772787_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_077996035.1\|3772798_3773845_-	aminomethyl transferase family protein	NA	NA	NA	NA
WP_077996036.1\|3773847_3776640_-	hypothetical protein	NA	NA	NA	NA
WP_077996037.1\|3776636_3777125_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
WP_024093465.1\|3777131_3777419_-	acyl carrier protein	NA	NA	NA	NA
WP_023484175.1\|3777541_3778288_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	4.9e-10	46.1
WP_077996038.1\|3778280_3779231_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_036655264.1\|3779227_3779647_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_024093462.1\|3779652_3780807_-	ABC transporter permease	NA	NA	NA	NA
WP_077996039.1\|3780982_3781930_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-24	32.4
WP_042118638.1\|3782322_3783375_+	Fic family protein	NA	NA	NA	NA
WP_024093460.1\|3783810_3785694_-	molecular chaperone HtpG	A0A1V0SAD6	Catovirus	3.6e-94	34.4
WP_158672810.1\|3786412_3787210_-	hypothetical protein	NA	NA	NA	NA
WP_077996042.1\|3787214_3788093_-	ABC transporter permease	NA	NA	NA	NA
WP_077996043.1\|3790861_3791761_-	DUF91 domain-containing protein	NA	NA	NA	NA
WP_077996044.1\|3791910_3795129_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_104932817.1\|3795135_3795762_-	hypothetical protein	NA	NA	NA	NA
WP_077996045.1\|3795889_3797350_-	hypothetical protein	NA	NA	NA	NA
WP_079940444.1\|3797334_3798639_-	DUF2399 domain-containing protein	NA	NA	NA	NA
WP_155121059.1\|3798864_3799002_-	hypothetical protein	NA	NA	NA	NA
WP_077996048.1\|3799290_3802641_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	2.0e-18	22.9
WP_158672811.1\|3802651_3803062_-	hypothetical protein	NA	NA	NA	NA
WP_077995375.1\|3803143_3804367_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_158672812.1\|3804359_3805244_-	hypothetical protein	NA	NA	NA	NA
WP_077996051.1\|3805250_3806708_-	SAM-dependent DNA methyltransferase	A0A1W6JNK1	Staphylococcus_phage	4.2e-21	28.6
WP_077584997.1\|3807258_3807345_-\|holin	putative holin-like toxin	A0A0K2CZR6	Paenibacillus_phage	2.0e-05	100.0
WP_149867724.1\|3807518_3808028_+	hypothetical protein	NA	NA	NA	NA
WP_077996053.1\|3808724_3811898_-	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA
WP_077996054.1\|3811999_3812221_-	mersacidin/lichenicidin family type 2 lantibiotic	NA	NA	NA	NA
WP_077996055.1\|3812321_3813476_-	hypothetical protein	NA	NA	NA	NA
WP_077996056.1\|3813481_3814180_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-14	30.0
WP_077996057.1\|3814195_3815206_-	S8 family serine peptidase	A0A2H4PQH1	Staphylococcus_phage	1.2e-22	28.9
WP_051428052.1\|3815202_3815451_-	response regulator transcription factor	NA	NA	NA	NA
WP_077997560.1\|3818296_3820234_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-11	44.2
WP_158672813.1\|3820550_3820835_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_077996060.1\|3820848_3821520_-\|transposase	IS3 family transposase	O48391	Streptococcus_phage	9.8e-18	68.8
WP_149867726.1\|3822306_3822678_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158672814.1\|3822803_3822971_-\|transposase	transposase	NA	NA	NA	NA
3830218:3830232	attR	NA	NA	NA	NA

DBSCAN-SWA_21

3841281 : 3850180

Synechococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996072.1\|3841281_3841905_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-26	38.9
WP_077996073.1\|3841901_3842948_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.5e-68	44.7
WP_077996074.1\|3843041_3844616_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.7e-49	31.6
WP_079940448.1\|3844600_3846844_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.5e-168	44.5
WP_023485275.1\|3846821_3847517_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_023485276.1\|3847589_3847832_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	4.3e-08	35.4
WP_077996075.1\|3847926_3848811_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	9.5e-37	33.6
WP_036655290.1\|3848884_3850180_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	6.3e-21	34.3

DBSCAN-SWA_22

3918127 : 3972112

Paenibacillus_phage(40.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036657132.1\|3918127_3919276_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.9e-27	33.6
WP_077996099.1\|3919699_3921001_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_104932776.1\|3921006_3921981_-	ATPase	NA	NA	NA	NA
WP_077996100.1\|3922026_3923034_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_024093340.1\|3923698_3924313_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	7.5e-73	62.6
WP_077996101.1\|3924430_3927049_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_077996102.1\|3927109_3928096_-	ABC transporter permease	NA	NA	NA	NA
WP_024093337.1\|3928092_3928869_-	ABC transporter permease	NA	NA	NA	NA
WP_077996103.1\|3928884_3929832_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-23	30.4
WP_079940453.1\|3929991_3930201_-	hypothetical protein	NA	NA	NA	NA
WP_077585258.1\|3930549_3930705_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.8e-06	46.0
WP_036655317.1\|3931016_3931319_-	hypothetical protein	NA	NA	NA	NA
WP_036657135.1\|3931427_3932588_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_077996105.1\|3932746_3933088_+	hypothetical protein	NA	NA	NA	NA
WP_023485170.1\|3933312_3933705_-	holo-[acyl-carrier-protein] synthase	NA	NA	NA	NA
WP_036655319.1\|3933799_3934705_-	ABC transporter permease	NA	NA	NA	NA
WP_077996106.1\|3934697_3935624_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-36	36.9
WP_023485173.1\|3935828_3936635_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.3e-53	45.2
WP_077585259.1\|3937081_3937510_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_023485175.1\|3937654_3938008_-	DUF3905 domain-containing protein	NA	NA	NA	NA
WP_077996107.1\|3938011_3938878_-	hypothetical protein	NA	NA	NA	NA
WP_077996108.1\|3938995_3939718_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_023485178.1\|3939720_3940239_-	PspC domain-containing protein	NA	NA	NA	NA
WP_077996109.1\|3940245_3940911_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_077996110.1\|3940965_3941256_-	hypothetical protein	NA	NA	NA	NA
WP_023485180.1\|3941514_3942201_-	hypothetical protein	NA	NA	NA	NA
WP_077996111.1\|3942340_3943363_+	hypothetical protein	NA	NA	NA	NA
WP_079940454.1\|3943396_3943897_+	FAD-binding protein	NA	NA	NA	NA
WP_155121060.1\|3944192_3944363_-	hypothetical protein	NA	NA	NA	NA
WP_104932657.1\|3944526_3945396_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.1e-135	99.6
WP_036654509.1\|3945416_3946100_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.6e-124	100.0
WP_077996114.1\|3946166_3946427_-	hypothetical protein	NA	NA	NA	NA
WP_077996115.1\|3946516_3947002_+	hypothetical protein	NA	NA	NA	NA
WP_077996116.1\|3947158_3948427_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.4e-28	60.2
WP_042118522.1\|3948525_3948888_-	hypothetical protein	NA	NA	NA	NA
WP_077996117.1\|3948966_3949299_-	hypothetical protein	NA	NA	NA	NA
WP_149867728.1\|3949283_3949748_-	hypothetical protein	NA	NA	NA	NA
WP_077996119.1\|3950748_3951342_+	undecaprenyl-diphosphatase	NA	NA	NA	NA
WP_158672815.1\|3951448_3951685_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.6e-26	98.3
WP_077995375.1\|3951749_3952973_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.2e-226	99.5
WP_077996122.1\|3953734_3954418_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.7e-118	96.9
WP_024093255.1\|3954605_3955307_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.3e-32	36.1
WP_077996123.1\|3955296_3956676_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-19	31.9
WP_024093253.1\|3956833_3957355_+	C40 family peptidase	NA	NA	NA	NA
WP_077996124.1\|3957428_3957911_-	hypothetical protein	NA	NA	NA	NA
WP_077996125.1\|3957961_3958693_-	VOC family protein	NA	NA	NA	NA
WP_077996126.1\|3959092_3959884_+	hypothetical protein	NA	NA	NA	NA
WP_077996127.1\|3959880_3960783_-	EamA family transporter	NA	NA	NA	NA
WP_051427941.1\|3961114_3962098_-	phosphotransferase	NA	NA	NA	NA
WP_036655338.1\|3962355_3963573_-	MFS transporter	NA	NA	NA	NA
WP_024093246.1\|3963638_3964229_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_077996128.1\|3964353_3965415_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_077996129.1\|3965691_3966732_-	oxidoreductase	NA	NA	NA	NA
WP_149867729.1\|3966816_3967116_-	hypothetical protein	NA	NA	NA	NA
WP_036655344.1\|3967640_3968123_-	hypothetical protein	NA	NA	NA	NA
WP_024093241.1\|3968532_3969018_-	hypothetical protein	NA	NA	NA	NA
WP_042119436.1\|3969974_3970289_-	MGMT family protein	NA	NA	NA	NA
WP_024093237.1\|3970552_3970924_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_077996131.1\|3970925_3971351_-	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_077996132.1\|3971707_3972112_-\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	5.1e-30	55.3

DBSCAN-SWA_23

4032491 : 4040187

Pneumococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077996172.1\|4032491_4033010_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.2e-49	63.1
WP_024093191.1\|4033036_4033774_-	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	4.2e-54	41.8
WP_077996173.1\|4033766_4034252_-	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	7.7e-57	68.2
WP_077996174.1\|4034248_4034920_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.4e-67	58.3
WP_077996175.1\|4035468_4037172_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	4.0e-76	32.3
WP_077996177.1\|4038204_4040187_+	acyltransferase family protein	B5WZU0	Pseudomonas_phage	2.0e-42	32.7

Anti-CRISPR protein detection

Acr_ID: NZ_CP019655.1|WP_079940400.1|3392918_3393548_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP019655.1|WP_162544755.1|3402057_3402225_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP019655.1|WP_079940400.1|3392918_3393548_-|hypothetical-protein

3392918_3393548_-

209 aa aa

3321195-3454657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019655_4	Unclear	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NZ_CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

NZ_CP019655.1|WP_162544755.1|3402057_3402225_-|hypothetical-protein

3402057_3402225_-

55 aa aa

3321195-3454657

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP019655_4	Unclear	4.28\|1974821\|30\|NZ_CP019655\|PILER-CR	1974821-1974850	30	3416299-3416328	1

1. spacer 4.28|1974821|30|NZ_CP019655|PILER-CR matches to NZ_CP019655 position: 3416299-3416328, mismatch: 1

tctttttcttcaaaggtgaccgttttgaaa	CRISPR spacer
tctttttcttcaaaggtgaccgttttaaaa	Protospacer
**************************.***

3. NZ_CP019658

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP019657

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23576 : 29973

Bacillus_phage(50.0%)

integrase

attL 25760:25773|attR 31070:31083

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077997741.1\|23576_23816_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0N9S804	Paenibacillus_phage	3.3e-08	50.0
WP_077997739.1\|23812_24142_+	mRNA-degrading endonuclease	NA	NA	NA	NA
WP_077997682.1\|24386_25025_-	hemolysin III family protein	NA	NA	NA	NA
25760:25773	attL	NA	NA	NA	NA
WP_077997683.1\|25792_26071_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.4e-15	51.7
WP_077997684.1\|26180_26387_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.6e-19	66.2
WP_077996502.1\|26743_27427_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-117	96.9
WP_077997687.1\|28431_29349_-\|integrase	tyrosine-type recombinase/integrase	A0A0A7AR08	Bacillus_phage	2.6e-93	57.0
WP_077997688.1\|29495_29747_+	hypothetical protein	NA	NA	NA	NA
WP_077997689.1\|29712_29973_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A125RQ76	Bacillus_phage	2.4e-20	54.7
31070:31083	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage