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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020007 Haemophilus influenzae strain 48P153H1 chromosome, complete genome 1 crisprs DEDDh,DinG,cas3,WYL 1 0 5 0

Results visualization

1. NZ_CP020007
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020007_1 245969-246082 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020007_1 1.1|245996|60|NZ_CP020007|CRISPRCasFinder 245996-246055 60 NZ_CP020007.1 245264-245323 0 1.0
NZ_CP020007_1 1.1|245996|60|NZ_CP020007|CRISPRCasFinder 245996-246055 60 NZ_CP020007.1 245630-245689 0 1.0
NZ_CP020007_1 1.1|245996|60|NZ_CP020007|CRISPRCasFinder 245996-246055 60 NZ_CP020007.1 244898-244957 1 0.983

1. spacer 1.1|245996|60|NZ_CP020007|CRISPRCasFinder matches to position: 245264-245323, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

2. spacer 1.1|245996|60|NZ_CP020007|CRISPRCasFinder matches to position: 245630-245689, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

3. spacer 1.1|245996|60|NZ_CP020007|CRISPRCasFinder matches to position: 244898-244957, mismatch: 1, identity: 0.983

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgtttgag	Protospacer
******************************************************.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80574 : 92670 11 Vibrio_phage(14.29%) tRNA NA
DBSCAN-SWA_2 1297216 : 1305734 8 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_3 1493761 : 1500440 10 Sodalis_phage(16.67%) NA NA
DBSCAN-SWA_4 1560577 : 1566771 13 Mannheimia_phage(57.14%) NA NA
DBSCAN-SWA_5 1575169 : 1587164 11 Acinetobacter_phage(42.86%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage