CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP053364	Klebsiella pneumoniae strain BA2275 chromosome, complete genome	2 crisprs	DEDDh,DinG,csa3,cas3,WYL,RT	13
NZ_CP053367	Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_2_VBA2275	0 crisprs	NA	0
NZ_CP053368	Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_1_VBA2275	0 crisprs	NA	0
NZ_CP053366	Klebsiella pneumoniae strain BA2275 plasmid p2, complete sequence	0 crisprs	NA	2
NZ_CP053365	Klebsiella pneumoniae strain BA2275 plasmid p1, complete sequence	0 crisprs	cas3,DEDDh	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053364_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053364_1

4026602-4026687

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053364_1

>merge|NZ_CP053364|1|4026602-4026687|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP053364|1|1|4026602-4026687|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053364.1\|WP_002888329.1\|4019353_4020640_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP053364.1\|WP_002888345.1\|4026784_4028149_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP053364.1\|WP_004147026.1\|4020694_4023043_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP053364.1\|WP_002888348.1\|4028942_4029602_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP053364.1\|WP_002888327.1\|4018358_4019348_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP053364.1\|WP_002888373.1\|4040608_4041376_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP053364.1\|WP_002888320.1\|4015575_4016055_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP053364.1\|WP_002888323.1\|4017160_4017538_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP053364.1\|WP_002888321.1\|4016307_4017156_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP053364.1\|WP_002888340.1\|4024834_4026460_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP053364.1\|WP_002888357.1\|4036074_4037577_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP053364.1\|WP_002888332.1\|4023286_4024114_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP053364.1\|WP_004151368.1\|4029614_4032521_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP053364.1\|WP_002888347.1\|4028328_4028868_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP053364.1\|WP_002888370.1\|4039634_4040480_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP053364.1\|WP_002888353.1\|4035241_4035937_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP053364.1\|WP_002888349.1\|4032708_4035066_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP053364.1\|WP_002888337.1\|4024146_4024845_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP053364.1\|WP_002888324.1\|4017540_4018362_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP053364.1\|WP_002888368.1\|4037587_4039297_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221

Protein	Function_ID	Function_description	E-value
NZ_CP053364.1\|WP_002888329.1\|4019353_4020640_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP053364.1\|WP_002888345.1\|4026784_4028149_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP053364.1\|WP_004147026.1\|4020694_4023043_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP053364.1\|WP_002888348.1\|4028942_4029602_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP053364.1\|WP_002888327.1\|4018358_4019348_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP053364.1\|WP_002888373.1\|4040608_4041376_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP053364.1\|WP_002888320.1\|4015575_4016055_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP053364.1\|WP_002888323.1\|4017160_4017538_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP053364.1\|WP_002888321.1\|4016307_4017156_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP053364.1\|WP_002888340.1\|4024834_4026460_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP053364.1\|WP_002888357.1\|4036074_4037577_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP053364.1\|WP_002888332.1\|4023286_4024114_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP053364.1\|WP_004151368.1\|4029614_4032521_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP053364.1\|WP_002888347.1\|4028328_4028868_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP053364.1\|WP_002888370.1\|4039634_4040480_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP053364.1\|WP_002888353.1\|4035241_4035937_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP053364.1\|WP_002888349.1\|4032708_4035066_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP053364.1\|WP_002888337.1\|4024146_4024845_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP053364.1\|WP_002888324.1\|4017540_4018362_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP053364.1\|WP_002888368.1\|4037587_4039297_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0

>NZ_CP053364.1|WP_002888340.1|4024834_4026460_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP053364.1|WP_002888337.1|4024146_4024845_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP053364.1|WP_002888332.1|4023286_4024114_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP053364.1|WP_004147026.1|4020694_4023043_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP053364.1|WP_002888329.1|4019353_4020640_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP053364.1|WP_002888327.1|4018358_4019348_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP053364.1|WP_002888324.1|4017540_4018362_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP053364.1|WP_002888323.1|4017160_4017538_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP053364.1|WP_002888321.1|4016307_4017156_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP053364.1|WP_002888320.1|4015575_4016055_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP053364.1|WP_002888345.1|4026784_4028149_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP053364.1|WP_002888347.1|4028328_4028868_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP053364.1|WP_002888348.1|4028942_4029602_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP053364.1|WP_004151368.1|4029614_4032521_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP053364.1|WP_002888349.1|4032708_4035066_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP053364.1|WP_002888353.1|4035241_4035937_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP053364.1|WP_002888357.1|4036074_4037577_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP053364.1|WP_002888368.1|4037587_4039297_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP053364.1|WP_002888370.1|4039634_4040480_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP053364.1|WP_002888373.1|4040608_4041376_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP053364_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053364_2

4896158-4896235

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053364_2

>merge|NZ_CP053364|2|4896158-4896235|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP053364|2|2|4896158-4896235|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053364.1\|WP_004151700.1\|4899474_4900632_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP053364.1\|WP_002895655.1\|4903460_4905482_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP053364.1\|WP_002895284.1\|4884659_4885583_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP053364.1\|WP_004151698.1\|4889031_4889988_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP053364.1\|WP_002895575.1\|4896387_4896864_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP053364.1\|WP_014342949.1\|4891667_4892606_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP053364.1\|WP_002895358.1\|4890049_4890775_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP053364.1\|WP_004151696.1\|4886277_4887561_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP053364.1\|WP_002895580.1\|4898437_4899478_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP053364.1\|WP_004229842.1\|4883785_4883932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053364.1\|WP_004142100.1\|4900615_4901371_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP053364.1\|WP_002895648.1\|4901363_4902086_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP053364.1\|WP_004153329.1\|4887715_4889035_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP053364.1\|WP_002895658.1\|4905730_4906828_-\|two-component-system-sensor-histidine-kinase-PmrB	unknown	unknown	gnl\|CDD\|236751
NZ_CP053364.1\|WP_004152853.1\|4902027_4902750_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP053364.1\|WP_002895652.1\|4902836_4903049_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053364.1\|WP_002895283.1\|4884136_4884643_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053364.1\|WP_004147672.1\|4894227_4895610_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP053364.1\|WP_002895578.1\|4896934_4898224_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP053364.1\|WP_002895420.1\|4892602_4894129_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484

Protein	Function_ID	Function_description	E-value
NZ_CP053364.1\|WP_004151700.1\|4899474_4900632_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP053364.1\|WP_002895655.1\|4903460_4905482_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP053364.1\|WP_002895284.1\|4884659_4885583_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09
NZ_CP053364.1\|WP_004151698.1\|4889031_4889988_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP053364.1\|WP_002895575.1\|4896387_4896864_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP053364.1\|WP_014342949.1\|4891667_4892606_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP053364.1\|WP_002895358.1\|4890049_4890775_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP053364.1\|WP_004151696.1\|4886277_4887561_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP053364.1\|WP_002895580.1\|4898437_4899478_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP053364.1\|WP_002895658.1\|4905730_4906828_-\|two-component-system-sensor-histidine-kinase-PmrB	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	0
NZ_CP053364.1\|WP_004142100.1\|4900615_4901371_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP053364.1\|WP_002895648.1\|4901363_4902086_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP053364.1\|WP_004153329.1\|4887715_4889035_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP053364.1\|WP_004152853.1\|4902027_4902750_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP053364.1\|WP_004147672.1\|4894227_4895610_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP053364.1\|WP_002895578.1\|4896934_4898224_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP053364.1\|WP_002895420.1\|4892602_4894129_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0

>NZ_CP053364.1|WP_004147672.1|4894227_4895610_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP053364.1|WP_002895420.1|4892602_4894129_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP053364.1|WP_014342949.1|4891667_4892606_+|urocanate-hydratase
MKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP053364.1|WP_002895358.1|4890049_4890775_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP053364.1|WP_004151698.1|4889031_4889988_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP053364.1|WP_004153329.1|4887715_4889035_+|imidazolonepropionase
MVFSHKKITFPCAIVDFTGVMKINVYTTHDKLSAMTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP053364.1|WP_004151696.1|4886277_4887561_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP053364.1|WP_002895284.1|4884659_4885583_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP053364.1|WP_002895283.1|4884136_4884643_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP053364.1|WP_004229842.1|4883785_4883932_+|hypothetical-protein
MAGEMHEIAPTREGVNSNAVVDRWLSSASDSEHSGKYDEALSAFCTVR
>NZ_CP053364.1|WP_002895575.1|4896387_4896864_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP053364.1|WP_002895578.1|4896934_4898224_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP053364.1|WP_002895580.1|4898437_4899478_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP053364.1|WP_004151700.1|4899474_4900632_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP053364.1|WP_004142100.1|4900615_4901371_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP053364.1|WP_002895648.1|4901363_4902086_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP053364.1|WP_004152853.1|4902027_4902750_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP053364.1|WP_002895652.1|4902836_4903049_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP053364.1|WP_002895655.1|4903460_4905482_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP053364.1|WP_002895658.1|4905730_4906828_-|two-component-system-sensor-histidine-kinase-PmrB
MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVEHEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELENRTPDNLTPIVLSESVPEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGMGVDPLIQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELEAMLAQRQQRLLLTDIENEAVVSGDATLIGVILRNLVENAHRYSPEGSTIRVSVKAGLMPVMAVEDEGPGIDEAKSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPQRGGQNVSTH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7991 : 14023

uncultured_Caudovirales_phage(83.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001116156.1\|7991_8378_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_171910834.1\|8916_10062_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	3.1e-165	76.6
WP_004199809.1\|10072_10513_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152564.1\|10516_10942_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152567.1\|13120_13720_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004217362.1\|13795_14023_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	4.6e-20	56.0

DBSCAN-SWA_2

247610 : 254039

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|247610_248231_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_171910849.1\|248223_249489_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.5e-232	99.3
WP_004151610.1\|249500_250403_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_004176269.1\|251445_252306_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_004176262.1\|252603_252864_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620097.1\|252950_254039_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0

DBSCAN-SWA_3

1297220 : 1312480

Bacillus_phage(18.18%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012967600.1\|1297220_1298603_-	O9 family phosphomannomutase RfbK2	A0A127AWJ1	Bacillus_phage	4.2e-31	25.8
WP_004180506.1\|1298625_1300041_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
WP_004184806.1\|1301118_1302123_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5
WP_004144151.1\|1302523_1302646_+	small membrane protein	NA	NA	NA	NA
WP_023278827.1\|1303069_1304236_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	5.3e-112	54.7
WP_023278826.1\|1304416_1304971_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.5e-51	57.6
WP_004189149.1\|1304985_1305876_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_023278825.1\|1305907_1306777_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.7e-110	66.7
WP_023278824.1\|1306803_1307868_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.5e-105	55.0
WP_023288453.1\|1308024_1309395_-	O9 family phosphomannomutase RfbK1	A0A127AWJ1	Bacillus_phage	6.4e-32	26.0
WP_004180506.1\|1309417_1310833_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
WP_000043543.1\|1311073_1312480_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_4

1356254 : 1363158

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019705218.1\|1356254_1357733_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|1357729_1358452_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|1358770_1360132_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004151134.1\|1360374_1361271_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004899467.1\|1361510_1362284_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004180551.1\|1362294_1363158_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_5

1700000 : 1740299

Salmonella_phage(30.95%)

integrase,tail,terminase

attL 1731443:1731457|attR 1742037:1742051

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060617789.1\|1700000_1700297_+	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	9.0e-24	62.8
WP_071561468.1\|1700395_1700548_+	transmembrane anchored protein	G9L6D9	Escherichia_phage	1.9e-14	85.7
WP_004200533.1\|1700582_1700879_-	hypothetical protein	A0A2R9YJP3	Escherichia_phage	4.4e-47	94.8
WP_060617788.1\|1701077_1703552_-	hypothetical protein	A0A0F6TK45	Escherichia_coli_O157_typing_phage	0.0e+00	86.9
WP_060617787.1\|1703555_1705358_-	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	2.0e-251	77.1
WP_060617786.1\|1705354_1708168_-	hypothetical protein	T1SBJ1	Salmonella_phage	0.0e+00	92.6
WP_032447858.1\|1708178_1708718_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
WP_060617785.1\|1708717_1709182_-	hypothetical protein	Q858G2	Salmonella_phage	5.8e-70	80.5
WP_060617784.1\|1709181_1711659_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.2
WP_060617783.1\|1711658_1712264_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	1.1e-87	77.0
WP_060617782.1\|1712263_1712587_-	hypothetical protein	G9L6C8	Escherichia_phage	3.1e-46	85.0
WP_004152442.1\|1712637_1712979_-	hypothetical protein	G9L6C7	Escherichia_phage	4.0e-36	70.8
WP_060617781.1\|1712989_1713427_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.5e-64	89.7
WP_060617780.1\|1713478_1714465_-	hypothetical protein	G9L6C5	Escherichia_phage	8.7e-164	87.2
WP_060617779.1\|1714482_1715184_-	peptidase	G9L6C4	Escherichia_phage	5.9e-74	85.4
WP_060617778.1\|1715186_1715483_-	hypothetical protein	T1SBI9	Salmonella_phage	3.5e-36	77.6
WP_060617777.1\|1715479_1717153_-\|tail	phage tail protein	T1S9Z7	Salmonella_phage	9.5e-288	90.3
WP_060617776.1\|1717167_1717374_-	hypothetical protein	G9L6C1	Escherichia_phage	4.3e-09	83.8
WP_060617775.1\|1718129_1718498_+	hypothetical protein	NA	NA	NA	NA
WP_131729179.1\|1718629_1718893_+	hypothetical protein	NA	NA	NA	NA
WP_060617773.1\|1718994_1720470_-	hypothetical protein	Q858H3	Salmonella_phage	5.4e-279	92.7
WP_032441400.1\|1720466_1721051_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
WP_032418540.1\|1721128_1721386_-	hypothetical protein	NA	NA	NA	NA
WP_023339258.1\|1723368_1723707_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
WP_032441458.1\|1723699_1723903_-	hypothetical protein	NA	NA	NA	NA
WP_050491799.1\|1723902_1724523_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
WP_029602865.1\|1724519_1724813_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
WP_072200041.1\|1724812_1725280_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
WP_032441402.1\|1726213_1726405_-	hypothetical protein	NA	NA	NA	NA
WP_060617721.1\|1726388_1726799_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	7.3e-16	55.6
WP_060617722.1\|1727615_1727969_-	hypothetical protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	1.3e-37	70.7
WP_032418532.1\|1728088_1728874_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_023285446.1\|1728870_1729638_-	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152537.1\|1729637_1729847_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_023285447.1\|1729993_1730227_-	hypothetical protein	T1SAR5	Salmonella_phage	1.2e-23	66.2
WP_060617723.1\|1730381_1730963_+	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.8e-64	64.3
WP_004164037.1\|1731191_1731341_+	hypothetical protein	G9L6A5	Escherichia_phage	7.9e-13	84.2
WP_060617724.1\|1731337_1731637_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	1.1e-18	52.5
1731443:1731457	attL	NA	NA	NA	NA
WP_060617725.1\|1731633_1732455_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A193GYK2	Enterobacter_phage	7.0e-135	82.8
WP_060596280.1\|1732451_1733333_+	recombinase RecT	T1SBJ5	Salmonella_phage	7.1e-133	82.9
WP_009485476.1\|1733381_1733630_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.0e-28	70.7
WP_060617726.1\|1733739_1734033_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_032439437.1\|1734025_1734184_+	DUF1317 family protein	T1SAR0	Salmonella_phage	4.3e-17	78.8
WP_060617727.1\|1734180_1734774_+	adenine methylase	T1SA14	Salmonella_phage	9.6e-110	91.9
WP_060617728.1\|1734770_1735541_+	hypothetical protein	D5LH17	Escherichia_phage	2.7e-64	52.0
WP_004200579.1\|1735537_1735729_+	hypothetical protein	NA	NA	NA	NA
WP_060617729.1\|1735745_1736996_-\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	3.1e-206	85.1
WP_004151979.1\|1737187_1738765_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004151980.1\|1738832_1740299_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
1742037:1742051	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1813266 : 1944468

154

Salmonella_phage(47.52%)

integrase,capsid,terminase,lysis,portal,head,tail,holin,plate,tRNA

attL 1907654:1907700|attR 1946129:1946175

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029602978.1\|1813266_1816329_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	93.8
WP_004190616.1\|1816325_1816706_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.5e-55	77.0
WP_029602979.1\|1816715_1817198_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.8e-82	95.0
WP_029602980.1\|1817378_1817843_-	hypothetical protein	A0A286S298	Klebsiella_phage	3.9e-58	68.4
WP_029602981.1\|1817842_1821409_-\|tail	phage tail length tape measure family protein	K7PMB9	Enterobacterial_phage	7.4e-80	29.7
WP_029602982.1\|1821504_1821867_-	membrane protein	S4TR42	Salmonella_phage	2.3e-05	72.4
WP_050486020.1\|1821912_1822410_-	hypothetical protein	NA	NA	NA	NA
WP_029602984.1\|1822491_1823022_-	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	6.1e-63	68.4
WP_077255250.1\|1823198_1823396_-	hypothetical protein	NA	NA	NA	NA
WP_023313117.1\|1823533_1824016_-	hypothetical protein	NA	NA	NA	NA
WP_029602985.1\|1824069_1825242_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	3.2e-24	27.3
WP_029602986.1\|1825265_1825658_-	electron transfer flavoprotein subunit beta	A0A059VK45	Pseudomonas_phage	2.4e-16	34.6
WP_134920973.1\|1825654_1826206_-	hypothetical protein	G8C7Q1	Escherichia_phage	8.6e-28	39.8
WP_029602988.1\|1826207_1826591_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	5.4e-21	45.2
WP_029602989.1\|1826592_1827003_-	hypothetical protein	A0A0H5AUF0	Pseudomonas_phage	6.0e-10	40.4
WP_032438199.1\|1827006_1827273_-	hypothetical protein	NA	NA	NA	NA
WP_029602991.1\|1827322_1828459_-	hypothetical protein	G8C7P7	Escherichia_phage	6.9e-157	74.9
WP_029602992.1\|1828546_1829311_-	hypothetical protein	G8C7P6	Escherichia_phage	1.1e-78	61.8
WP_029602993.1\|1829417_1830530_-	hypothetical protein	I6PD76	Cronobacter_phage	2.1e-110	53.8
WP_029602994.1\|1830513_1831938_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	1.5e-193	71.5
WP_004146208.1\|1831942_1833247_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	4.8e-146	59.8
WP_029602995.1\|1833224_1834229_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	2.8e-37	45.0
WP_029602997.1\|1834479_1834716_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	2.2e-17	64.1
WP_029602998.1\|1835114_1835315_-	hypothetical protein	A0A1L6Z528	Klebsiella_phage	3.4e-19	75.0
WP_029602999.1\|1835625_1835898_-	hypothetical protein	NA	NA	NA	NA
WP_029497196.1\|1836030_1836315_+	hypothetical protein	NA	NA	NA	NA
WP_134920972.1\|1836550_1836826_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	1.3e-08	92.3
WP_171910884.1\|1836822_1837167_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.4e-38	80.7
WP_004184488.1\|1837163_1837703_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
WP_024940884.1\|1837699_1837999_-\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_029602868.1\|1838259_1839081_-	antitermination protein	K7PKS8	Enterobacteria_phage	1.4e-98	67.5
WP_134920971.1\|1839196_1839553_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	8.8e-42	64.1
WP_004892208.1\|1839549_1839846_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.2e-36	72.9
WP_029602867.1\|1840054_1840651_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.9e-89	79.6
WP_071557491.1\|1840685_1840934_-	hypothetical protein	K7PHG9	Enterobacteria_phage	5.0e-28	67.9
WP_004184503.1\|1841039_1841273_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_040241897.1\|1841648_1841876_-	hypothetical protein	NA	NA	NA	NA
WP_032438203.1\|1842041_1842293_-	hypothetical protein	A0A2P1MXF0	Escherichia_phage	5.3e-09	42.7
WP_110570673.1\|1842285_1842819_-	DUF551 domain-containing protein	R9TQX3	Aeromonas_phage	2.0e-42	53.2
WP_029602865.1\|1842938_1843232_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
WP_023328761.1\|1843752_1843959_-	hypothetical protein	R9TRD3	Aeromonas_phage	1.6e-32	100.0
WP_032438205.1\|1843955_1844369_-	hypothetical protein	T1SBJ7	Salmonella_phage	1.4e-19	52.8
WP_029602862.1\|1844496_1845282_-	hypothetical protein	C7BGF1	Burkholderia_phage	1.6e-64	52.9
WP_016160790.1\|1845274_1845610_-	DUF977 family protein	H6WRX9	Salmonella_phage	7.6e-11	43.0
WP_029602861.1\|1845617_1846367_-	ATP-binding protein	H6WRX8	Salmonella_phage	3.1e-121	84.3
WP_029602860.1\|1846369_1847278_-	DNA-binding protein	V5URT9	Shigella_phage	2.9e-89	49.2
WP_071826821.1\|1847292_1847481_-	hypothetical protein	NA	NA	NA	NA
WP_029602859.1\|1847825_1848389_-	hypothetical protein	K7P7P2	Enterobacteria_phage	3.6e-29	44.1
WP_029602858.1\|1848391_1848622_-	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	3.2e-29	85.9
WP_029602857.1\|1848725_1849112_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	1.0e-56	92.9
WP_032438209.1\|1849238_1849649_+	hypothetical protein	NA	NA	NA	NA
WP_029602856.1\|1849677_1849881_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.1e-20	76.1
WP_004179600.1\|1850346_1850538_+	YebW family protein	NA	NA	NA	NA
WP_023282477.1\|1850546_1850702_+	hypothetical protein	K7PGY4	Enterobacteria_phage	2.0e-14	71.2
WP_029602855.1\|1850839_1853938_+	PD-(D/E)XK nuclease-like domain-containing protein	H6WRX1	Salmonella_phage	6.0e-296	57.6
WP_029602854.1\|1853950_1855039_+	recombinase RecT	H6WRX0	Salmonella_phage	1.4e-106	56.0
WP_029602853.1\|1855073_1855757_+	hypothetical protein	R9VWB9	Serratia_phage	6.2e-76	64.3
WP_012542038.1\|1855753_1856062_+	hypothetical protein	I6PD68	Cronobacter_phage	4.2e-24	56.9
WP_071557557.1\|1856069_1856309_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	3.2e-24	71.8
WP_023301228.1\|1856345_1856621_+	excisionase Xis	H6WRW8	Salmonella_phage	9.2e-31	72.7
WP_023301229.1\|1856598_1857828_-\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	1.3e-238	96.3
WP_004144354.1\|1858259_1858739_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_002914070.1\|1858735_1859692_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_002914072.1\|1859691_1860342_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_002914074.1\|1860374_1860950_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_121980491.1\|1860946_1861042_-	rpoE leader peptide RseD	NA	NA	NA	NA
WP_002914076.1\|1861370_1862990_+	L-aspartate oxidase	NA	NA	NA	NA
WP_002914079.1\|1862974_1863712_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_004174811.1\|1863843_1865169_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|1865214_1865598_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|1865910_1866600_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|1866657_1867743_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|1867946_1868372_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|1868441_1869140_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004188841.1\|1869174_1871826_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|1871946_1873302_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|1873343_1873667_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|1873670_1874969_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|1880926_1883500_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|1883629_1884361_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|1884357_1885338_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|1885469_1886207_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|1886477_1886813_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|1886919_1886967_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|1887067_1888228_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|1888224_1889097_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|1889159_1890281_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|1890290_1891361_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|1891703_1892213_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|1892205_1893429_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|1893442_1893925_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|1893933_1895304_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|1895360_1895819_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|1895938_1896286_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|1896325_1897093_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|1897124_1897673_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|1897691_1897940_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|1898199_1899564_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|1899727_1900519_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|1900538_1901825_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|1901944_1902535_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|1902659_1903538_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|1903624_1905286_+	DNA repair protein RecN	NA	NA	NA	NA
WP_002914160.1\|1905433_1905775_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|1905841_1906132_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|1906121_1906598_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|1906708_1907191_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1907654:1907700	attL	NA	NA	NA	NA
WP_004150980.1\|1907794_1908172_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|1908199_1908418_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|1908484_1909579_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|1909575_1910061_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_171910885.1\|1910057_1912454_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.1e-107	44.5
WP_002896220.1\|1912680_1912800_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|1912814_1913114_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|1913166_1913682_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|1913691_1914864_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|1915012_1916086_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004200602.1\|1916137_1917256_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|1917265_1919215_-	CotH kinase family protein	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|1919216_1919888_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|1919880_1920789_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|1920775_1921138_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|1921134_1921707_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|1921801_1922668_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|1922690_1923137_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|1923129_1923552_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_072093160.1\|1923514_1923673_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	9.0e-15	75.0
WP_004150998.1\|1923647_1924076_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|1924072_1924456_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|1924460_1924970_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|1924950_1925166_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|1925169_1925373_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|1925372_1925837_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_134920983.1\|1925932_1926586_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	7.2e-90	79.5
WP_004151003.1\|1926589_1927642_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|1927658_1928492_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_019405037.1\|1928632_1930396_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151006.1\|1930395_1931439_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|1931495_1931765_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|1932286_1933288_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1933287_1934367_+	hypothetical protein	NA	NA	NA	NA
WP_004151009.1\|1934353_1935037_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|1935132_1935366_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|1935377_1935566_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_060617653.1\|1937636_1940021_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.8
WP_004151013.1\|1940017_1940869_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|1940865_1941093_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|1941092_1941326_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|1941393_1941732_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|1941695_1941896_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|1941903_1942413_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|1942445_1942688_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|1942810_1943440_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_060617654.1\|1943442_1944468_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	7.3e-190	93.5
1946129:1946175	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2664101 : 2712944

uncultured_Caudovirales_phage(68.75%)

capsid,protease,terminase,portal,head,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|2664101_2664596_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|2664599_2665238_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|2665207_2665492_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|2665549_2665942_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|2665957_2666386_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|2666651_2667779_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|2667969_2668368_+	DUF1043 family protein	NA	NA	NA	NA
WP_002918566.1\|2668541_2669909_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|2669996_2671055_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|2671191_2672130_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|2672544_2673015_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|2673390_2673654_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|2673752_2674019_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|2674069_2674345_-	barstar family protein	NA	NA	NA	NA
WP_002918632.1\|2674424_2676392_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|2676397_2677330_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|2677337_2677541_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|2677672_2678602_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|2678637_2680083_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|2680171_2683969_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|2684006_2685476_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|2685478_2686060_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|2686067_2686556_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|2686555_2687548_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|2687618_2688662_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|2688967_2690908_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|2690987_2691179_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|2691407_2692409_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|2692408_2693017_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|2693240_2693693_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|2693715_2694183_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|2694193_2695543_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|2695653_2695896_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|2695885_2697337_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|2697348_2698230_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|2698587_2699553_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|2699577_2699874_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|2700027_2700219_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|2700221_2701883_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|2701866_2702223_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150957.1\|2702353_2702506_-	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_004150959.1\|2702498_2702942_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|2702941_2703241_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|2703237_2703573_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|2703569_2704811_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|2704812_2705373_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|2705424_2706591_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|2706854_2707367_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|2707415_2707751_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|2708093_2710229_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|2710228_2710594_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|2710590_2710959_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004150967.1\|2710955_2711270_-	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|2711262_2711451_-	hypothetical protein	NA	NA	NA	NA
WP_106918304.1\|2711443_2711713_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_004150969.1\|2712164_2712944_-	phage antirepressor KilAC domain-containing protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

DBSCAN-SWA_8

4278337 : 4289991

Enterobacteria_phage(70.0%)

integrase

attL 4266472:4266486|attR 4289528:4289542

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4266472:4266486	attL	NA	NA	NA	NA
WP_002889890.1\|4278337_4280671_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|4280682_4281003_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889911.1\|4280999_4281227_-	hypothetical protein	NA	NA	NA	NA
WP_072028197.1\|4281223_4281775_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|4281777_4282044_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_002889917.1\|4282585_4283323_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889919.1\|4283319_4283565_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889930.1\|4283582_4284149_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_004152979.1\|4284717_4285143_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|4285142_4286093_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|4286080_4287271_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|4287623_4288877_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|4288887_4289991_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4289528:4289542	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4499549 : 4547204

Salmonella_phage(17.65%)

tRNA,capsid,terminase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004143010.1\|4499549_4500935_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
WP_004143016.1\|4500980_4501193_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143017.1\|4501194_4502061_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004151317.1\|4503532_4503868_-	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_004151316.1\|4503869_4504085_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
WP_004151314.1\|4504086_4504305_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
WP_069135318.1\|4504301_4505072_-	dcm methylase	D5LH17	Escherichia_phage	8.5e-66	52.4
WP_039108983.1\|4505068_4505596_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	3.8e-57	61.6
WP_064323882.1\|4505624_4506248_-	YqaJ viral recombinase family protein	A0A0S2SY31	Pseudomonas_phage	5.3e-58	59.7
WP_023342707.1\|4506244_4506991_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	7.0e-65	67.7
WP_100091652.1\|4507007_4507292_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.6e-40	80.9
WP_004151303.1\|4507380_4507575_-	hypothetical protein	NA	NA	NA	NA
WP_171910920.1\|4507567_4507726_-	hypothetical protein	NA	NA	NA	NA
WP_065799713.1\|4508012_4508216_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.0e-18	68.7
WP_064174666.1\|4508253_4509111_-	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	2.2e-38	40.6
WP_032420811.1\|4509513_4510224_-	helix-turn-helix domain-containing protein	K7P7K3	Enterobacteria_phage	2.9e-92	71.4
WP_001548452.1\|4510328_4510520_+	hypothetical protein	A0A2R2Z333	Escherichia_phage	2.4e-09	55.4
WP_038435002.1\|4510599_4510884_+	hypothetical protein	K7PHN8	Enterobacterial_phage	1.3e-19	56.2
WP_004151298.1\|4510918_4511065_+	hypothetical protein	NA	NA	NA	NA
WP_040220032.1\|4511057_4512143_+	replication protein	E5AGE9	Erwinia_phage	1.2e-84	45.6
WP_058343155.1\|4512139_4513513_+	replicative DNA helicase	E5AGF0	Erwinia_phage	5.2e-167	64.2
WP_058343166.1\|4513517_4513817_+	hypothetical protein	M1FPD5	Enterobacteria_phage	1.1e-18	55.8
WP_064766632.1\|4513813_4514326_+	hypothetical protein	K7PKY4	Enterobacterial_phage	3.4e-18	38.3
WP_014342897.1\|4514439_4514571_+	hypothetical protein	NA	NA	NA	NA
WP_014342898.1\|4514563_4515238_+	ead/Ea22-like family protein	C6ZR30	Salmonella_phage	7.8e-07	63.0
WP_041937862.1\|4515237_4515756_+	hypothetical protein	G9L6B3	Escherichia_phage	2.3e-91	92.7
WP_014342899.1\|4515752_4516706_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	2.5e-51	42.8
WP_004151288.1\|4517206_4517662_+	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
WP_023342724.1\|4517661_4517832_+	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
WP_134920947.1\|4517824_4518463_+	recombination protein NinG	H6WRY9	Salmonella_phage	2.9e-75	69.8
WP_041937861.1\|4518459_4518639_+	hypothetical protein	NA	NA	NA	NA
WP_014342901.1\|4518635_4518758_+	hypothetical protein	NA	NA	NA	NA
WP_041937860.1\|4518754_4519534_+	antitermination protein	Q76H66	Enterobacteria_phage	6.3e-101	76.7
WP_004146347.1\|4520171_4520486_+	hypothetical protein	H6WRZ3	Salmonella_phage	6.3e-44	86.1
WP_117090884.1\|4520488_4520992_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	3.2e-74	77.8
WP_134920949.1\|4520988_4521378_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	7.7e-23	48.4
WP_032444939.1\|4521836_4522472_+	hypothetical protein	I6S676	Salmonella_phage	4.2e-103	82.1
WP_043875689.1\|4522502_4522988_+	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	1.8e-66	78.3
WP_040218288.1\|4522989_4524666_+\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	1.8e-249	74.4
WP_134920950.1\|4524666_4526187_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.2e-105	44.8
WP_171910921.1\|4526239_4526929_+\|capsid	minor capsid protein	H9C0V1	Aeromonas_phage	1.6e-63	53.5
WP_134920951.1\|4526991_4528809_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	6.9e-58	37.5
WP_065803132.1\|4528810_4529293_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	5.9e-33	50.3
WP_019724831.1\|4529292_4530330_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.9e-84	50.0
WP_134920952.1\|4530331_4530658_+	hypothetical protein	H9C0V9	Aeromonas_phage	1.3e-10	41.6
WP_012542596.1\|4530657_4531101_+	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	1.8e-12	40.3
WP_012542595.1\|4531103_4531667_+	hypothetical protein	H9C0W2	Aeromonas_phage	3.7e-18	32.9
WP_029497286.1\|4531663_4532032_+	hypothetical protein	Q6UJ26	Burkholderia_virus	1.2e-06	29.8
WP_104466756.1\|4532013_4532565_+	hypothetical protein	NA	NA	NA	NA
WP_171910922.1\|4532568_4534050_+	DUF3383 domain-containing protein	Q2NPD0	Xanthomonas_phage	2.1e-60	35.0
WP_004196864.1\|4534049_4534493_+	hypothetical protein	NA	NA	NA	NA
WP_134920953.1\|4534674_4535232_+	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.7e-84	85.3
WP_134920962.1\|4535311_4535788_+	hypothetical protein	A0A068CGG2	Acinetobacter_phage	7.2e-07	29.8
WP_134920954.1\|4535992_4538005_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	6.1e-39	54.4
WP_134920955.1\|4538008_4538848_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.3e-27	31.4
WP_019725008.1\|4538849_4539155_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	3.6e-20	48.5
WP_134920956.1\|4539151_4540021_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	8.8e-27	28.3
WP_134920957.1\|4540010_4540601_+	hypothetical protein	A0A077KAY0	Edwardsiella_phage	1.1e-25	36.4
WP_134920958.1\|4541055_4541412_+	hypothetical protein	NA	NA	NA	NA
WP_101881433.1\|4541419_4542652_+\|plate	baseplate J/gp47 family protein	A0A077KGW9	Edwardsiella_phage	2.3e-105	51.0
WP_134920959.1\|4542644_4543232_+	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	2.9e-34	42.9
WP_134920960.1\|4544624_4547204_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-31	63.1

DBSCAN-SWA_10

4989700 : 5019833

Salmonella_phage(86.67%)

integrase,capsid,terminase,lysis,portal,head,tail,plate

attL 4989608:4989626|attR 5019906:5019924

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4989608:4989626	attL	NA	NA	NA	NA
WP_014342959.1\|4989700_4990681_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-97	57.2
WP_001154434.1\|4992754_4992943_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|4992953_4993187_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|4993301_4993979_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|4994254_4995997_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|4996059_4997085_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|4997084_4998851_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|4998993_4999827_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|4999843_5000902_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|5000905_5001556_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|5001651_5002116_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|5002115_5002319_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|5002322_5002538_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|5002518_5003028_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|5003032_5003416_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|5003412_5003841_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896170.1\|5003827_5003974_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.0e-13	76.1
WP_002896172.1\|5003936_5004368_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|5004360_5004807_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004150857.1\|5004803_5005496_-	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|5005590_5006163_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_002896179.1\|5006159_5006522_+	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896182.1\|5006508_5007417_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|5007409_5008009_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_019724930.1\|5010227_5010962_+	hypothetical protein	NA	NA	NA	NA
WP_171482189.1\|5011322_5011697_+	hypothetical protein	NA	NA	NA	NA
WP_002896188.1\|5011693_5011897_+	hypothetical protein	NA	NA	NA	NA
WP_171910931.1\|5011926_5013003_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|5013141_5014314_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|5014323_5014839_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|5014891_5015191_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|5015205_5015325_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_014342962.1\|5015550_5017944_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.1e-106	44.0
WP_002896224.1\|5017940_5018426_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|5018422_5019523_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|5019614_5019833_+	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	7.5e-20	69.0
5019906:5019924	attR	NA	NA	NA	NA

DBSCAN-SWA_11

5054245 : 5063710

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|5054245_5055361_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|5055357_5057298_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|5057374_5057596_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|5057921_5058239_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|5058269_5060549_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|5060670_5060889_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|5061242_5061944_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|5061988_5063710_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_12

5163072 : 5185530

Pectobacterium_phage(25.0%)

head,integrase,tail

attL 5161975:5161989|attR 5194626:5194640

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5161975:5161989	attL	NA	NA	NA	NA
WP_029602741.1\|5163072_5164101_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-94	54.1
WP_004191087.1\|5164104_5164329_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	5.9e-20	66.7
WP_025712917.1\|5164538_5164724_-	hypothetical protein	NA	NA	NA	NA
WP_025712916.1\|5164725_5165292_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.3e-51	61.5
WP_060617682.1\|5165291_5167433_-	hypothetical protein	H9C157	Pectobacterium_phage	3.5e-101	35.3
WP_060617681.1\|5167465_5167756_-	hypothetical protein	NA	NA	NA	NA
WP_077260001.1\|5167799_5168033_-	hypothetical protein	NA	NA	NA	NA
WP_025712912.1\|5169006_5169393_-	helix-turn-helix domain-containing protein	A5VW98	Enterobacteria_phage	3.4e-15	57.8
WP_022644596.1\|5169473_5169668_+	hypothetical protein	NA	NA	NA	NA
WP_022644597.1\|5169728_5170175_+	hypothetical protein	H9C162	Pectobacterium_phage	5.7e-30	56.1
WP_046387639.1\|5170258_5170417_+	hypothetical protein	NA	NA	NA	NA
WP_060617680.1\|5170419_5171412_+	hypothetical protein	A0A067ZIA1	Vibrio_phage	2.6e-30	55.5
WP_048293424.1\|5171408_5172797_+	AAA family ATPase	Q8HA30	Enterobacteria_phage	1.7e-104	47.2
WP_060617679.1\|5172835_5173486_+	hypothetical protein	NA	NA	NA	NA
WP_004191074.1\|5173489_5173723_+	hypothetical protein	NA	NA	NA	NA
WP_029602733.1\|5173762_5174548_+	hypothetical protein	C7BGF1	Burkholderia_phage	1.5e-62	51.4
WP_029602732.1\|5174675_5175266_+	adenine methylase	A0A0F6TJC3	Escherichia_coli_O157_typing_phage	2.5e-94	83.4
WP_004141582.1\|5175268_5175499_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	5.0e-06	37.3
WP_029602730.1\|5176171_5176486_+	hypothetical protein	NA	NA	NA	NA
WP_029602729.1\|5176478_5176817_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.6e-45	81.1
WP_029602728.1\|5176998_5177190_+	hypothetical protein	NA	NA	NA	NA
WP_004199500.1\|5177258_5177852_+	DUF1367 family protein	H9C173	Pectobacterium_phage	7.2e-81	72.1
WP_072002479.1\|5177841_5178165_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	2.3e-25	54.7
WP_023316634.1\|5178152_5178509_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_029602726.1\|5178505_5178799_+	hypothetical protein	G8C7W3	Escherichia_phage	9.8e-31	71.1
WP_004199520.1\|5178867_5179101_+	hypothetical protein	NA	NA	NA	NA
WP_023316637.1\|5179084_5179345_+	hypothetical protein	NA	NA	NA	NA
WP_060617678.1\|5179351_5179804_+	DNA-packaging protein	A3EYX3	Salmonella_phage	3.2e-49	66.4
WP_060617677.1\|5179888_5181283_+	hypothetical protein	A0A0E3JIA1	Rhodoferax_phage	6.9e-58	36.9
WP_060617676.1\|5181282_5182947_+\|head,tail	head-tail connector protein	A0A221SAN2	Ralstonia_phage	2.0e-104	39.3
WP_029503969.1\|5182949_5183273_+	hypothetical protein	NA	NA	NA	NA
WP_060617675.1\|5183259_5184012_+	hypothetical protein	NA	NA	NA	NA
WP_004191051.1\|5184022_5185018_+	hypothetical protein	W6MW28	Pseudomonas_phage	2.7e-104	60.2
WP_004191050.1\|5185056_5185530_+	hypothetical protein	K4NYY6	Pseudomonas_phage	1.8e-26	46.3
5194626:5194640	attR	NA	NA	NA	NA

DBSCAN-SWA_13

5190535 : 5201095

Salmonella_phage(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060617670.1\|5190535_5193043_+	transglycosylase SLT domain-containing protein	Q775D3	Bordetella_phage	3.5e-28	27.1
WP_060617669.1\|5193042_5194884_+	hypothetical protein	Q858F9	Salmonella_phage	8.0e-78	32.6
WP_060617668.1\|5194883_5197601_+	hypothetical protein	Q858F8	Salmonella_phage	1.4e-259	51.0
WP_060617667.1\|5197597_5197906_+	hypothetical protein	NA	NA	NA	NA
WP_060617666.1\|5197945_5198158_+	hypothetical protein	NA	NA	NA	NA
WP_064764910.1\|5198353_5199604_-	hypothetical protein	NA	NA	NA	NA
WP_060617664.1\|5199811_5200027_+\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	1.1e-12	61.0
WP_004199518.1\|5200028_5200568_+	lysozyme	H6WRZ4	Salmonella_phage	4.5e-82	78.7
WP_060617663.1\|5200564_5201095_+	hypothetical protein	K7PHH7	Enterobacteria_phage	1.6e-34	49.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP053366

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4031

Klebsiella_phage(57.14%)

integrase

attL 467:480|attR 6339:6352

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152153.1\|314_833_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
467:480	attL	NA	NA	NA	NA
WP_004154298.1\|838_1549_+	Rha family transcriptional regulator	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152151.1\|1538_1763_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004152150.1\|1759_1972_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_014343018.1\|2214_2448_+	hypothetical protein	NA	NA	NA	NA
WP_004198245.1\|2520_2667_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.9e-15	70.8
WP_004152148.1\|2626_2869_+	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152147.1\|2849_4031_-\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
6339:6352	attR	NA	NA	NA	NA

DBSCAN-SWA_2

12306 : 39641

uncultured_Caudovirales_phage(36.36%)

terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152573.1\|12306_12660_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152572.1\|12661_13315_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152571.1\|13368_13935_-	hypothetical protein	NA	NA	NA	NA
WP_004199301.1\|13977_14160_-	hypothetical protein	NA	NA	NA	NA
WP_004152570.1\|14209_14551_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004152569.1\|14550_15573_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004217362.1\|15575_15803_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	4.6e-20	56.0
WP_004152567.1\|15878_16478_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152565.1\|18469_18622_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152564.1\|18657_19083_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_171910950.1\|19086_19233_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	1.3e-15	77.1
WP_004152177.1\|19533_20679_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152176.1\|20682_21123_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_001116156.1\|21217_21604_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_000113538.1\|22105_22525_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000725700.1\|22493_22775_-	hypothetical protein	NA	NA	NA	NA
WP_000528476.1\|23766_24261_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_004199270.1\|24264_25467_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_171910951.1\|25518_26040_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	5.4e-48	56.5
WP_004152172.1\|27809_29210_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004218030.1\|29160_29649_-	hypothetical protein	A0A1I9KFG9	Aeromonas_phage	1.9e-10	38.6
WP_004152170.1\|30014_30335_-	hypothetical protein	NA	NA	NA	NA
WP_004153952.1\|30569_30959_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152169.1\|30955_31486_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004146526.1\|31488_31737_-\|holin	class II holin family protein	M9NZI9	Enterobacteria_phage	2.7e-05	41.8
WP_004152167.1\|32142_32925_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004198239.1\|32921_33398_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004198233.1\|33394_34357_-	toprim domain-containing protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_072200049.1\|34358_36017_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	95.8
WP_004152162.1\|36593_36815_-	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004152161.1\|36912_37581_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152160.1\|37751_38066_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152159.1\|38058_38247_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152158.1\|38416_38782_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152157.1\|38774_39029_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004177208.1\|39000_39219_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_004152156.1\|39215_39641_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP053365

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17209 : 73933

Stx2-converting_phage(22.22%)

transposase,integrase

attL 50693:50708|attR 76981:76996

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427623.1\|17209_18214_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_071527925.1\|18511_18754_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004118251.1\|19084_19378_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_004152282.1\|19476_20244_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004152281.1\|20244_21201_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004118243.1\|21197_22196_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118241.1\|22192_23095_-	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004152280.1\|23139_25464_-	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_004118237.1\|25549_26503_-	fec operon regulator FecR	NA	NA	NA	NA
WP_004118235.1\|26499_27021_-	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_004118231.1\|28123_28291_+\|integrase	integrase	NA	NA	NA	NA
WP_004118840.1\|28575_29703_+	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118229.1\|29699_30293_+	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004152279.1\|30289_31138_+	ABC transporter permease	NA	NA	NA	NA
WP_004118227.1\|31137_32058_+	ABC transporter permease	NA	NA	NA	NA
WP_004152278.1\|32070_33675_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118225.1\|33719_34667_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004230378.1\|35504_36407_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-15	29.6
WP_171910942.1\|38642_40181_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.6e-273	91.8
WP_004152557.1\|40230_40578_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.0e-59	95.7
WP_020956879.1\|40574_40961_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.1e-58	90.7
WP_004118217.1\|41508_42144_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_000005560.1\|42140_43253_-	His-Xaa-Ser system radical SAM maturase HxsC	S5WIP3	Leptospira_phage	1.5e-47	33.8
WP_004118216.1\|43245_44634_-	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	6.3e-51	29.0
WP_000333416.1\|44633_44906_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_001166628.1\|46582_47038_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294656.1\|47109_47475_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000732275.1\|47490_47766_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000522996.1\|47793_48219_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000209296.1\|48257_49943_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_001277466.1\|49960_50326_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_001087807.1\|50322_50559_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000993245.1\|50624_50837_+	DUF3330 domain-containing protein	NA	NA	NA	NA
50693:50708	attL	NA	NA	NA	NA
WP_010791757.1\|50995_52678_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	M4T586	Rhodobacter_phage	3.7e-05	24.7
WP_000393453.1\|52680_53589_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_000801210.1\|53585_54803_+	TniQ family protein	NA	NA	NA	NA
WP_000412211.1\|56486_57146_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|57346_57724_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001138073.1\|59115_62088_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|62090_62648_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000845039.1\|62954_63968_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_032488579.1\|64198_64753_+	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
WP_000679427.1\|64921_65269_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|65262_66102_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376617.1\|66229_66472_+	hypothetical protein	NA	NA	NA	NA
WP_001183923.1\|66555_66855_-	DUF2293 domain-containing protein	NA	NA	NA	NA
WP_016479969.1\|66968_67139_-	hypothetical protein	NA	NA	NA	NA
WP_004201046.1\|68364_69018_+	endonuclease III	NA	NA	NA	NA
WP_000855769.1\|69115_69961_-	RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_014386410.1\|71090_71870_+	APH(3')-VI family aminoglycoside O-phosphotransferase	E4ZFP6	Streptococcus_phage	6.9e-31	34.7
WP_000019445.1\|72952_73933_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
76981:76996	attR	NA	NA	NA	NA

DBSCAN-SWA_2

160358 : 226659

Escherichia_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000608644.1\|160358_161621_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_015058212.1\|161944_163090_+	class C beta-lactamase CMY-6	NA	NA	NA	NA
WP_001221666.1\|163183_163717_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	6.1e-47	54.1
WP_000118520.1\|163713_164031_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_000606835.1\|164758_170245_+	DUF4165 domain-containing protein	NA	NA	NA	NA
WP_001259346.1\|170393_171101_+	DsbC family protein	NA	NA	NA	NA
WP_000637384.1\|171097_173545_+	type IV secretion system protein TraC	NA	NA	NA	NA
WP_000351984.1\|173559_173877_+	hypothetical protein	NA	NA	NA	NA
WP_001010740.1\|173873_174404_+	S26 family signal peptidase	NA	NA	NA	NA
WP_001447719.1\|174366_175632_+	conjugal transfer protein TraW	NA	NA	NA	NA
WP_000575345.1\|175628_176300_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000983282.1\|176296_177304_+	TraU family protein	NA	NA	NA	NA
WP_001447718.1\|177407_180215_+	conjugal transfer mating pair stabilization protein TraN	NA	NA	NA	NA
WP_171910943.1\|181010_182201_-\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	1.9e-48	43.1
WP_134921023.1\|182205_182418_-	hypothetical protein	NA	NA	NA	NA
WP_000796664.1\|182540_183182_-	hypothetical protein	NA	NA	NA	NA
WP_000547566.1\|183475_183796_+	hypothetical protein	NA	NA	NA	NA
WP_001186917.1\|184099_184285_+	hypothetical protein	NA	NA	NA	NA
WP_000085160.1\|184504_185473_+	CbbQ/NirQ/NorQ C-terminal domain-containing protein	L7TKP0	Rhizobium_phage	1.2e-29	32.6
WP_000739139.1\|185483_186392_+	hypothetical protein	NA	NA	NA	NA
WP_000987165.1\|186452_186983_+	single-stranded DNA-binding protein	A0A291LCB6	Klebsiella_phage	2.6e-42	71.8
WP_001282585.1\|187077_188067_+	phage recombination protein Bet	B5AX97	Iodobacteriophage	1.1e-52	39.6
WP_000706865.1\|188129_189140_+	YqaJ viral recombinase family protein	E0YQ48	Mycobacterium_phage	5.6e-09	28.7
WP_000170087.1\|189339_190617_+	DUF3150 domain-containing protein	NA	NA	NA	NA
WP_000122922.1\|191458_193186_+	toprim domain-containing protein	A0A0P0ZFY3	Escherichia_phage	9.9e-14	32.6
WP_000268337.1\|193172_193451_+	hypothetical protein	NA	NA	NA	NA
WP_000714163.1\|193523_193745_+	hypothetical protein	NA	NA	NA	NA
WP_000427620.1\|193926_194931_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000184001.1\|195158_196364_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|196374_196680_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|196906_197671_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|198163_198748_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|198747_199986_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|199982_200888_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_014386481.1\|209160_209805_+	quinolone resistance pentapeptide repeat protein QnrB1	NA	NA	NA	NA
WP_134890811.1\|213093_213567_+	trimethoprim-resistant dihydrofolate reductase DfrA	G3MBI7	Bacillus_virus	3.5e-14	28.3
WP_001144737.1\|213787_214054_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004098817.1\|215220_216435_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_072094655.1\|216468_217872_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.0e-106	50.6
WP_001749967.1\|218283_218490_-	hypothetical protein	NA	NA	NA	NA
WP_001749966.1\|218494_219136_-	restriction endonuclease	NA	NA	NA	NA
WP_032433963.1\|219191_219515_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|221657_222362_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_060617735.1\|224689_225040_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	8.9e-39	63.8
WP_015632444.1\|225069_226659_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.9e-189	66.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053364

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP053366

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP053365

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection