CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP020089	Enterobacter cloacae strain PIMB10EC27 chromosome, complete genome	4 crisprs	csa3,DEDDh,WYL,DinG,cas1,cas8f,cas5f,cas7f,cas6f,cas3	19	7
NZ_CP020090	Enterobacter cloacae strain PIMB10EC27 plasmid pEC27-1, complete sequence	0 crisprs	NA	0	1
NZ_CP020091	Enterobacter cloacae strain PIMB10EC27 plasmid pEC27-2, complete sequence	0 crisprs	RT	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020089_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020089_1

800887-801018

Orphan

Consensus_repeat	Method
TGTTGCCGCCATCGTCGGTATTGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP020089_1

>merge|NZ_CP020089|1|800887-801018|CRISPRCasFinder
TGCCGCCGCCGTTATCGGTATTATTACCACCGTCGCCGTTATCATTGCCGCCGCTGTTGCCGCCATCGTCGGTATTGCTGCCATTGTCACTGTTACCGCCATTATCAGTGTTACCGCCATCGTCGGTATTGC

>NZ_CP020089|1|1|800887-801018|CRISPRCasFinder
TGCCGCCGCCGTTATCGGTATTAT	TACCACCGTCGCCGTTATCATTGCCGCCGC
TGTTGCCGCCATCGTCGGTATTGC	TGCCATTGTCACTGTTACCGCCATTATCAG
TGTTACCGCCATCGTCGGTATTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020089.1\|WP_057071063.1\|808303_809290_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP020089.1\|WP_058678754.1\|810629_812981_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP020089.1\|WP_023620045.1\|795127_796276_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP020089.1\|WP_013095539.1\|807104_807482_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP020089.1\|WP_029882680.1\|788810_791627_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP020089.1\|WP_023620041.1\|803229_803760_+\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP020089.1\|WP_013095542.1\|809289_810576_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP020089.1\|WP_013095532.1\|796294_799519_+\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP020089.1\|WP_013095540.1\|807485_808307_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP020089.1\|WP_013095538.1\|806251_807100_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP020089.1\|WP_020688470.1\|787838_788765_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP020089.1\|WP_058678753.1\|803752_805618_+\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP020089.1\|WP_013095544.1\|813220_814039_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP020089.1\|WP_013095528.1\|792244_792694_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP020089.1\|WP_013095533.1\|799658_799892_+\|YgdI/YgdR-family-lipoprotein	unknown	unknown	gnl\|CDD\|380215
NZ_CP020089.1\|WP_028015471.1\|792695_793646_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP020089.1\|WP_058678751.1\|793851_794673_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP020089.1\|WP_003856458.1\|787247_787511_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP020089.1\|WP_008502023.1\|805732_806212_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP020089.1\|WP_013095527.1\|791626_792127_+\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739

Protein	Function_ID	Function_description	E-value
NZ_CP020089.1\|WP_057071063.1\|808303_809290_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP020089.1\|WP_058678754.1\|810629_812981_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP020089.1\|WP_023620045.1\|795127_796276_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP020089.1\|WP_013095539.1\|807104_807482_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	9.40134e-77
NZ_CP020089.1\|WP_029882680.1\|788810_791627_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP020089.1\|WP_023620041.1\|803229_803760_+\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	1.52855e-134
NZ_CP020089.1\|WP_013095542.1\|809289_810576_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP020089.1\|WP_013095532.1\|796294_799519_+\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP020089.1\|WP_013095540.1\|807485_808307_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.09184e-146
NZ_CP020089.1\|WP_013095538.1\|806251_807100_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP020089.1\|WP_020688470.1\|787838_788765_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	9.41429e-172
NZ_CP020089.1\|WP_058678753.1\|803752_805618_+\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP020089.1\|WP_013095544.1\|813220_814039_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	3.34124e-172
NZ_CP020089.1\|WP_013095528.1\|792244_792694_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	1.82359e-107
NZ_CP020089.1\|WP_013095533.1\|799658_799892_+\|YgdI/YgdR-family-lipoprotein	gnl\|CDD\|380215	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein. Members of this family are exclusively lipoproteins of small size, including YgdI and YgdR from E. coli K-12.	6.95711e-30
NZ_CP020089.1\|WP_028015471.1\|792695_793646_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP020089.1\|WP_058678751.1\|793851_794673_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	7.43131e-141
NZ_CP020089.1\|WP_003856458.1\|787247_787511_-\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.02681e-26
NZ_CP020089.1\|WP_008502023.1\|805732_806212_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.13223e-126
NZ_CP020089.1\|WP_013095527.1\|791626_792127_+\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	3.46545e-76

>NZ_CP020089.1|WP_013095533.1|799658_799892_+|YgdI/YgdR-family-lipoprotein
MQNKLLIASVLAATAMFTVAGCSSNQAVKTTDGRTIITDGKPQVDDDTGLVSYKNAETGQTEQINRDQVKSMGELDN
>NZ_CP020089.1|WP_013095532.1|796294_799519_+|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAAEVGYPCIIRPSFTMGGTGGGIAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAELGINGLDADFLRMLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLIEVNPRAARTVPFVSKATGIPLAKVAARVMAGQTLAQQGVTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKSGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGRQAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQINK
>NZ_CP020089.1|WP_023620045.1|795127_796276_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNLDAALALEKAKAFPGLNGMDLAKEVTTTEAYSWTQGSWTLSDDLPEAKKESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIDAIKSFLETDIPVFGICLGHQLLALASGANTIKMKFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP020089.1|WP_058678751.1|793851_794673_+|4-hydroxy-tetrahydrodipicolinate-reductase
MHDAQIRVAIAGAGGRMGRQLIQAALQMDGVALGAALEREGSSLVGADAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLTHLAFCRQHGKGMVIGTTGFDEAGKQAIQDASHEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIVEAHHRYKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSRMTFANGAVRSALWLKDKENGLFDMRDVLDLNNL
>NZ_CP020089.1|WP_028015471.1|792695_793646_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALEIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVLTLNVKNEARLSFMTQTTLSVDDTSDVIDALRQRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGKAAFLIDDATDIQEAWVKNAACVGVTAGASAPDILVQNVIARLQELGGGEAVPLEGREENIVFEVPKELRIDAREVE
>NZ_CP020089.1|WP_013095528.1|792244_792694_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSKSVQSNSAVLVHFTLKLDDGSTAESTRNNGKPALFRLGDTSLSEGLEQQLLGLKEGEKKAFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGRTVHFDIEVLEIDPVLEA
>NZ_CP020089.1|WP_013095527.1|791626_792127_+|lipoprotein-signal-peptidase
MSKTLCSTGLRWLWLVVVVLIIDLGSKFLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGICVVLAVLMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADSAICIGAALIVLEGFLPKPAAKEQA
>NZ_CP020089.1|WP_029882680.1|788810_791627_+|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELKVEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRADFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFEAVDQDAIKGKFGLPGVSGPISLVIWTTTPWTLPANRAISLSGEFEYALVQIDGQALILAKDLVESVLKRANITDYTVLGTVKGDALELMRFKHPFLDFDVPAILGDHVTLEAGTGAVHTAGGHGPDDYNISLKYGLEIANPVGPDGSYLPGTYPSLDGINVFKANDIIVEMLRERGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPNTLELMEEVAKRVEVDGIQAWWDLDARDILGADADNYEKVPDTLDVWFDSGSTHASVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDIVKAYESYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYEGLFDLSSTEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGAKVADYADASADAQQSELLKGLKVALSKAEGEKCPRCWHYTTDVGQVAEHADICGRCVSNVAGDGEKRKFA
>NZ_CP020089.1|WP_020688470.1|787838_788765_+|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSKAPHGCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLELFAGDKSPARLTRLREKLRYLAQSGVDYVLCVRFDRRFAALTAQNFVSDLLVKRLGVQFLAVGDDFRFGAGRQGDFLLLQKAGLEYGFDVTSAMTFCEGGVRVSSTAVRQALANDELETAENLLGHPFTISGRVVHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPFYGVANIGTRPTVAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTAREFFGL
>NZ_CP020089.1|WP_003856458.1|787247_787511_-|30S-ribosomal-protein-S20
MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQNAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
>NZ_CP020089.1|WP_023620041.1|803229_803760_+|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQVRTLDNVEIRSLYQLYPDFNIDIAAEQEALTRADLIIWQHPMQWYSTPPLLKLWIDKVFSHGWAYGHNGHALKGKSLMWAVTTGGGESHFDIGSFPGFEVLAQPLQATALYCGLTWLPPFAMHCTFVCDDETLQAQARHYKQRLLEWQETHNG
>NZ_CP020089.1|WP_058678753.1|803752_805618_+|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGAAALIVPVAVRLGLGSVLGYLIAGCVIGPWGFRLVTDAEAILHFAEIGVVLMLFVIGLELDPQRLWKLRVSVFGGGALQMAACGLLLGGFCILLGMDWKVAELIGMTLALSSTAIAMQAMNERNLTVSQMGRSAFSVLLFQDIAAIPLVAMIPLLAASGASTTLGAFALSALKVVGALALVVLLGRYVTRPLLRFVARSGLREVFSAVALFLVFGFGLLLEEAGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLVTHPLRILILLVGFLVIKMVMLWLIARPLNVPGRQRLWFAVLLGQGSEFAFVVFGAAQMANVLDPEWAKALTLAVALSMAATPILLVLLTRLEKTGSEQEREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVILDHDPDHVDTLRKFDMKVFYGDATRVDLLESAGAAKAEVLINAIDDPQTSMQLVELVKEHFPNLTIISRARDVDHYIQLRQAGVDAPERETFEGALKSGRMALESLGLGAYEARERADLFRRFNTDMVEEMVAMAGSTATERAAVFKRTSAMLTEIINEDRNHLSLVQRHGWQGTEEGKHTGDPADEPKSKPSA
>NZ_CP020089.1|WP_008502023.1|805732_806212_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRTTLNKPVVMGRLTWESIGRPLPGRKNIVISSQPGTDDRVEWVKSVDEAIAACGNAEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP020089.1|WP_013095538.1|806251_807100_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLKQVDFTPGRDILWLTGDLVARGPGSLEVLRFVKSLGDSVRMVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELINWLRRQPLLQIDEEKKLVMAHAGITPQWDLETAKTCARDVEAVLASDSYPFFLDAMYGDMPNHWSEDLSGLARLRFITNAFTRMRFCFPNGQLDMYSKETPESAPAPLKPWFAIPGPVTSEYSVVFGHWAALEGKGTPEGIYGLDTGCCWGGDLTCLRWEDKTYFVQPSNRQLDLGEGEAVAS
>NZ_CP020089.1|WP_013095539.1|807104_807482_-|Co2+/Mg2+-efflux-protein-ApaG
MIDSPRVCVQVQSVYVESQSSPDEERFVFAYTVTIRNLGRMPVQLLGRYWLITNGNGREIEVQGEGVVGEQPHIAPGEEYQYTSGAVIETPLGTMQGHYEMVDVDGNVFRVAIPVFRLAVTTLIH
>NZ_CP020089.1|WP_013095540.1|807485_808307_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDLRVLSRITTEAFNQRRKTIRNSLGNLFTVDVLAELGIDPAMRAENISVEQYCKLANYISENAPPKES
>NZ_CP020089.1|WP_057071063.1|808303_809290_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MKQHRVVITPGEPAGIGPDLVVQLAQRSWPVELVVCADATLLQDRASLLGLPLTLIPYVEGQQPAPQQAGTLTLLPVPLRTPVIPGQLSTENGHYVVETLARACDGCIKSEFAALITGPVHKGVINEAGIPFTGHTEFFEERSHTPKVVMMLATEAMRVALVTTHLPIKAIPDAITPELLREIIGILHHDLQTKFGIKQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLNEMRAKGMNLSGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALDLAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP020089.1|WP_013095542.1|809289_810576_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGISYSTYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPENPTSDQAAEAESQARAIVEQARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQARAKLQQIAADIKSGKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVKVLSN
>NZ_CP020089.1|WP_058678754.1|810629_812981_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIGTALYSQQGLAADLASQCMLGVPSYNRPLVSGDTNSLPVTITADSSKGTYPDNATFTGSVDINQGNSRLQADEVQLHQKQPEGAAEPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSNTWSVVGSEVIHDREEQVAEIWNARFKLGPVPVFYSPYLQLPVGDKRRSGFLIPNAKYSTSNYFEFYLPYYWNIAPNMDATITPHYIHKRGNVMWENEFRYLTQAGTGLMELDYLPSDKVFQDEHPTEGDKHRWMYYWQHAGVMDQVWRFNVDYTKVSDPYYFNDFDSKYGSSTDGYATQIFSAGYAVQNFDATVSTKQFQVFDSQNTSTYGAEPQLDVNWYQNDVGPFDTRVYAQAVHFVNTNSDMPEATRVHLEPTINLPLSNNWSSLNTEAKLMATHYQQKNVDWYNNRYGTDLDESVNRVLPQFKMDGKLIFERDMGLLADGYTQTLEPRMQYLYVPYRDQSKIQNYDSAFLQSDYSGLFRDRTYGGLDRIASANQLTTGVTTRVYDESAVERFNVSVGQIYYFTESRTGDDNINWEKDNKTGSLVWAGDTYWRMTDRWGLRGGLQYDTRLDNIATSSAAVEYRRDEDRMVQLTYRYASPEYIQATLPNYATSEQYKDGISQVGGAASWPIADRWSIVGAYYFDTNANKPADQMVGLQYNSCCYALRVGYERKLNGWDTQNNQSKYDNVIGFNVELRGLSSNYGLGTQQMLRSNILPYRSSL
>NZ_CP020089.1|WP_013095544.1|813220_814039_+|co-chaperone-DjlA
MQYWGKIIGVAFAIIMGAGFWGIVLGLIIGHMFDKARSRKMAWFANQRERQSLFFSTTFEVMGHLTKSKGRVTEADIQIASVFMDRMNLHGESRVAAQNAFRIGKSDNYPLREKMRQFRSICFGRFDLIRMFLEIQIQAAFADGSLHPNERDVLYVIAEELGISRMQFDQFLRMMQGGAHFGGGYQQHQSSGGGWQQAQRGPTLEDACNVLGVKPSDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKNFK

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Crispr_ID: NZ_CP020089_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020089_2

1388913-1389029

Orphan

Consensus_repeat	Method
GCCCTCACCCCGGCCCTCTCCCACGGGGAGAGGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020089_2

>merge|NZ_CP020089|2|1388913-1389029|CRISPRCasFinder
GCCCTCACCCCGGCCCTCTCCCACGGGGAGAGGGAGCAAACACTAAAAACGGCAACGGGGTTGCCGTTTTGCTTTTACCTCGCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGGAG

>NZ_CP020089|2|2|1388913-1389029|CRISPRCasFinder
GCCCTCACCCCGGCCCTCTCCCACGGGGAGAGGGAG	CAAACACTAAAAACGGCAACGGGGTTGCCGTTTTGCTTTTACCTC
GCCCTCACCCCGGCCCTCTCCCACAGGGAGAGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020089.1\|WP_013097646.1\|1385310_1387344_+\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP020089.1\|WP_038418881.1\|1397578_1398571_-\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP020089.1\|WP_058678329.1\|1383108_1384581_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP020089.1\|WP_058678325.1\|1380003_1380774_+\|(S)-acetoin-forming-diacetyl-reductase	unknown	unknown	gnl\|CDD\|181518
NZ_CP020089.1\|WP_038418883.1\|1402125_1403301_+\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP020089.1\|WP_058651704.1\|1384594_1385182_-\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP020089.1\|WP_058678351.1\|1400977_1401937_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP020089.1\|WP_058678333.1\|1387869_1388154_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP020089.1\|WP_058678342.1\|1392640_1392853_+\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP020089.1\|WP_038418873.1\|1381430_1383095_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP020089.1\|WP_058678340.1\|1391430_1392630_+\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP020089.1\|WP_058678347.1\|1398567_1399575_-\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP020089.1\|WP_058678327.1\|1380912_1381386_+\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP020089.1\|WP_013097652.1\|1378303_1379983_+\|acetolactate-synthase-AlsS	unknown	unknown	gnl\|CDD\|236312
NZ_CP020089.1\|WP_058678331.1\|1387481_1387868_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368831
NZ_CP020089.1\|WP_058678335.1\|1388234_1388882_-\|enterobactin-synthase-subunit-EntD	unknown	unknown	gnl\|CDD\|182334
NZ_CP020089.1\|WP_058678345.1\|1392849_1396707_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP020089.1\|WP_058678349.1\|1399683_1400931_+\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP020089.1\|WP_020684607.1\|1396781_1397582_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP020089.1\|WP_058678337.1\|1389044_1391285_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410

Protein	Function_ID	Function_description	E-value
NZ_CP020089.1\|WP_013097646.1\|1385310_1387344_+\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP020089.1\|WP_038418881.1\|1397578_1398571_-\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP020089.1\|WP_058678329.1\|1383108_1384581_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP020089.1\|WP_058678325.1\|1380003_1380774_+\|(S)-acetoin-forming-diacetyl-reductase	gnl\|CDD\|181518	PRK08643, PRK08643, (S)-acetoin forming diacetyl reductase.	2.00553e-179
NZ_CP020089.1\|WP_038418883.1\|1402125_1403301_+\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP020089.1\|WP_058651704.1\|1384594_1385182_-\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	1.8735e-116
NZ_CP020089.1\|WP_058678351.1\|1400977_1401937_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP020089.1\|WP_058678333.1\|1387869_1388154_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	7.43944e-16
NZ_CP020089.1\|WP_058678342.1\|1392640_1392853_+\|MbtH-family-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	1.66982e-28
NZ_CP020089.1\|WP_038418873.1\|1381430_1383095_-\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_CP020089.1\|WP_058678340.1\|1391430_1392630_+\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP020089.1\|WP_058678347.1\|1398567_1399575_-\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	1.59726e-177
NZ_CP020089.1\|WP_058678327.1\|1380912_1381386_+\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	2.31131e-10
NZ_CP020089.1\|WP_013097652.1\|1378303_1379983_+\|acetolactate-synthase-AlsS	gnl\|CDD\|236312	PRK08617, PRK08617, acetolactate synthase AlsS.	0
NZ_CP020089.1\|WP_058678331.1\|1387481_1387868_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368831	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system. RelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, pfam04221.	4.63001e-07
NZ_CP020089.1\|WP_058678335.1\|1388234_1388882_-\|enterobactin-synthase-subunit-EntD	gnl\|CDD\|182334	PRK10251, PRK10251, enterobactin synthase subunit EntD.	9.33841e-59
NZ_CP020089.1\|WP_058678345.1\|1392849_1396707_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP020089.1\|WP_058678349.1\|1399683_1400931_+\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP020089.1\|WP_020684607.1\|1396781_1397582_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP020089.1\|WP_058678337.1\|1389044_1391285_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0

>NZ_CP020089.1|WP_058678335.1|1388234_1388882_-|enterobactin-synthase-subunit-EntD
MHTTHSTFVLASLTVHRITFAPTTFTDADLLWLPHHAQLADAGRKRKAEHLAGRIAAAHALPGHAVPGIGPSGEPLWPEGVSGSITHSGTQAMAVVVHHPHALVGIDTEAILSDREAHEIQDGIINAQEAACLTRSGYPFAQALTLAFSAKESLFKALFPQVKIYMGFDCARVAALDDKTLVLVLSRPAGEYAEGTRFTLFWHKRDDSVLTLLQA
>NZ_CP020089.1|WP_058678333.1|1387869_1388154_+|helix-turn-helix-domain-containing-protein
MSIFDELKTSLEEAVEIHSGRKAASKVTRYEVADVRAIREQLNVTQSEMAKALGTSVDTIKSWESKRRNPTGLAAKVLNVIQKDPAFYKALAAQ
>NZ_CP020089.1|WP_058678331.1|1387481_1387868_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MNHAIEFIETSLFTRQIKSIATDDELKDLQKELIAWPDKGDLIQQTGGLRKIRMATGPKGKRGGARVIYFLATKEVIYFIMAYPKNTKDSLTEAEKAELKKLTSVLKNTASNAVNERCTMYSVQAEGV
>NZ_CP020089.1|WP_013097646.1|1385310_1387344_+|choline-BCCT-transporter-BetT
MTDLSQDREKDKINPVVFYTSAGLILLFSLMTIFFSDFSAEWIGRTLNWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKKINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSLAAKAALIALSVIIATISVTAGVDKGIRVLSELNVALALGLILFVLFVGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFTFTLLWLSVFGNSALHEIIHGDAAFAQEAMAHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPLGAQDRLSWKKRLSRLMNYPGTRYTSQMMETVCFPAMEEVAQELRLRGAYVELKNLPPEEGETLGHLDLLVHMGDEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGNSVMFPDV
>NZ_CP020089.1|WP_058651704.1|1384594_1385182_-|transcriptional-regulator-BetI
MPKVGMQPIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITGQLRDAVLSRLHALPDGSAEQRLQAIVGGNFDETQISSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKPLDKNVAQSLTSHFISQHLPTE
>NZ_CP020089.1|WP_058678329.1|1383108_1384581_-|betaine-aldehyde-dehydrogenase
MSRMAEQQLYINGGYTSATSGRTFETINPANGDVLATVQAAGREDVDRAVQSARQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKFKAAFEQKIVERVGRIRAGDLFDESTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGEGFDNGAWVAPTVFTDCTDEMTIVREEIFGPVMSILTYETDEEAIRRANDTDYGLAAGIVTADLNRAHRAIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMGKFQSIF
>NZ_CP020089.1|WP_038418873.1|1381430_1383095_-|choline-dehydrogenase
MQFDYIIIGAGSAGNVLATRLTEDPDTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPYMNNRRMECGRGKGLGGSSLINGMCYVRGNAMDLDNWAKEPGLEHWSYLNCLPYYRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKQRPNLTIRTHAMTDRILFDGKRAVGVEWLEGESTIPSKASANKEVLLCAGAIASPQILQRSGVGNAELLKQFDIPLVHDLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFEWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDKYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGSCKMGYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADAIRGREPLAKSTAAYYVANGAPVRR
>NZ_CP020089.1|WP_058678327.1|1380912_1381386_+|cold-shock-domain-containing-protein
MNGTITTWFKDKGFGFIKDENGDNRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAYAVKVIPESKYLYIAGERVKLPSIKSFVVFSEEEPADTGIDKENAVLSVGLLMNNIKPKTDKKPGEMRTVKKLAITTFQNTTLIFTEDEIDIDATVKLLK
>NZ_CP020089.1|WP_058678325.1|1380003_1380774_+|(S)-acetoin-forming-diacetyl-reductase
MQKVALVTGSGQGIGKAIALRLVKDGFAVAIADFNDETARAVADEIIRNGGNAIAVKVDVSDRDQVFAAVEKARTALGGFNVIVNNAGIAPSTPIESITPEIVDKVYNINVKGVIWGMQAAIDAFRKEGHGGKIINACSQAGHTGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNAYCPGIVKTPMWAEIDCQVSEAAGKPLGYGTETFAKRITLGRLSEPEDVAACVSYLAGPDSDYMTGQSLLIDGGMVFN
>NZ_CP020089.1|WP_013097652.1|1378303_1379983_+|acetolactate-synthase-AlsS
MNSEKQSRQWAHGADMVVGQLEAQGVKQVFGIPGAKIDKVFDSLLDSSIEIIPVRHEANAAFMAAAVGRLTGKAGVALVTSGPGCSNLITGIATANSEGDPVVALGGAVKRADKAKLVHQSMDTVAMFSPVTKYAVEVSSPDAIAEVVSNAFRAAEHGRPGGAFVSLPQDIVDQPATGAILPASGPALMGPAPESAINDVAKLIDKAKNPVILLGLMASQPANSAALRKLLEKSRIPVTSTYQAAGAVNQEHFTRFAGRVGLFNNQAGDRLLHLADLIICIGYSPVEYEPSMWNSGDATLVHIDVLPAYEERNYVPDLELVGDIAETLNLLANRIDHKLELSQRASEILVDRQHQRDLLDRRGASLNQFALHPLRIVRAMQDIVNNDVTLTVDMGSFHIWIARYLYSFRARQVMISNGQQTMGVALPWAIGAWLVNPGRKVVSVSGDGGFLQSSMELETAVRLNANVLHIIWVDNGYNMVAIQEEKKYQRLSGVEFGPVDFKAYADAFGARGFAVESADALEPTLRAAMDVNGPAVVAIPVDYSDNPLLMGQLHLSQIL
>NZ_CP020089.1|WP_058678337.1|1389044_1391285_-|TonB-dependent-siderophore-receptor
MNKKIHSLALLVNLGIYGVALPAMADDNTASAQHEDTMVITAAEQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGSWNTYLNAPEHKDEGSTKRTNFSLSGPLGGDFSFRMYGNLDKTQADAWDINQGHQSERTGAYANTLPAGREGVENKDINGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNALVKKNYGKETNRIYRQNFAVTWNGGWDNGITTSNWAQYEHTRNSRLGEGLAGGTEGLFNSDKFTDTDLADVMLHSEINLPIDFIVNQNLTLGTEWNQQRMKDSTSFSQTLQGGTIPGMSDDRSPYTSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASSDGVGCYMMGNDDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRNKIEAGYAPIGQTATSKVTTDIYQWENVPKAVVEGLEGSLNVPVSDTINWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVHQDVSLQSTFTWYGKQQPKKYNYKGQPVTGSEKDEVSPYSILGLSATWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNTSTGAYMYGAGAYTYNEPGRTWYMSVNTRF
>NZ_CP020089.1|WP_058678340.1|1391430_1392630_+|enterochelin-esterase
MTVLTTGSEAWWQSKNGPEWVREQGKYRVTFWWRDPAGTQHTSAVKRVWLYITGVTDHHKNARPQSLERIPDTDVWQWQGEFSPQWRGSYCFIPSENTDDFAPDVFHGEQPDRLALREGWRKLLPQAMSDPLNTQSWRGGRGHDVSALEMPDAPVQPGWDRPNTPYRQPVCIDWQSNRLGNCRRVWIFTTGDDDPERPLAVLLDGQFWAESMPVWPALTALTDGRKLPPAVYVLIDVIDMAHRNNELPCNPDFWLAVQEELLPLVKQHTAFSDRADRTVVAGQSFGGLSSLYAALNWPQRFGCVLSQSGSYWWPHRGGQQEGLLIAQLKAGEKTARGLRIVLEAGRNEPLIYRANQAIYDELHTQQQVYWRQVDGGHDALCWRGGLTQGLMTLWQPLIH
>NZ_CP020089.1|WP_058678342.1|1392640_1392853_+|MbtH-family-protein
MEFSNPFDNPQGQFAILRNDQGQYSLWPQKCELPAGWRVVCEAQSQDACQQWLAEHWQTLSPSNYAGEHA
>NZ_CP020089.1|WP_058678345.1|1392849_1396707_+|enterobactin-non-ribosomal-peptide-synthetase-EntF
MNRLPLVAAQPGIWMAEQLSSLPNAWSVAHYTELKGDIDAPLLAKAVAEGMMQADTLRMRFTEDNGEVWQWVDASMTLPEPEIVNAGSHDAAVALMDADLNQNLRVDSGQLLAFHLLIQIGPQHWYWYQRYHHLVVDGFSFPAITRQIAAIYAAWKRGEPTPDSPFTPFAGVVEEYQRYRDSEAYQRDGAFWVEQRKQLPSPVSLSSAPLPGRAATTDILRLKIAADGRAFSQLAQAAGQVQRTDLALALVALWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPLAVNIHPHESLPELAQRLANQLKKMRRHQRYDAEQIVRDSGRAAGDEALFGPVLNVKVFDYQLDIDGVEATTHTLATGPVNDLELALFPDEQGGLSIEILANKQRYDETTLARHVARLNAMLTQFAANPDLRCGEVETVSEQEYQQLTRINDTGLALPSTTLAELVAEQASKTPDAPALADAHIELSYRQMREQVVALAHLLRERGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAKPSLLITTDEQRPRFSDLSVGTFSYNTLLPAADAEPLRLAKPEQTAYIIFTSGSTGRPKGVMVGHTAIVNRLKWMQDHYPLTACDVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPDAHRDPQAMQQFFAHYGVTTTHFVPSMLAAFVASLTLENAECCKSLRQVFCSGEALPTELCREWERLTHVPLHNLYGPTEAAVDVSWYPAFGPELAAVAGNSVPIGFPVWNTGLRILDAMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLSLPDVAQAVAHACVFNQAAATGGDARQLVGYVVSESGLPLDRDALLASLRSQLPPHMVPVVLLQISALPLSANGKLDRKALPLPELTSKTSGRAPESATEIAVSQAFASLLGCAVNDIEADFFALGGHSLLAMRLAAQLSRTFARKVTPGQIMVASTVSRLSALLDSPISDEQAQRLGYETLLPLRESDGPTLFCFHPASGFAWQFSVLARYLSPRWSITGIQSPRPEGPMQQCADLDGVIEHHLTTLRGRQPHGPYYLFGYSLGGTLAQGIAARLRQQGETVAFLGLLDTWPPETQNWAEKEANGLDPAVLAEIERERQAFIAAQQGQGSSALFNAIEGNYADAVRLLTTAHSSRFDGKATLFVAERTRTIDPQVAWSPWVNELEVYSQDCAHVDIISPQAFEKIGPVLQKMLG
>NZ_CP020089.1|WP_020684607.1|1396781_1397582_-|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTDSTTRLRGESLTLGYGKKIVAHDLTVNIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPVEGHVFLDGEQIQRFASKEVARRIGLLAQNATTPGDITVQELVSRGRYPHQPLFTRWRKEDEDAVNRAMQATGITDLARQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSELNRTQGYTLAAVLHDLNQACRYATHLIALRDGEIVAQGAPKEIVTPALIERIYGMRCMIIDDPVAGTPLVVPLGKRAR
>NZ_CP020089.1|WP_038418881.1|1397578_1398571_-|iron-enterobactin-ABC-transporter-permease
MMAPSRRLIVSVSLLVIAILMLAIASLCSGAVTLDLAQVFNALTGSAPRAVTMVVTEWRLPRVAMAMLVGAALGVSGAIFQSLMRNPLGSPDVMGLNTGAWSGVLVAMVLFGQHLTAITVTAMTGGILTALVIWLLAWRNGIDTFRLIIIGIGVRAMLMAFNTWLLLQASLETALSAGLWYAGSLNGLTWGKVWPAAPLILLMFIAALLLVRRMRLLEMGDDSACALGVGVERSRLMLMLVAVLLTAASTAIAGPISFIALVAPHIARRLSGTARWGLTQAALCGSMLLLAADLCAQRLFMPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP020089.1|WP_058678347.1|1398567_1399575_-|Fe(3+)-siderophore-ABC-transporter-permease
MSFSSSSAVRAVAVPVLLLLLILAMALSLLVGAKPLPASVIVDALFGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNSGASFTIVLGAALFGFTSPSEQLVMAFCGALAASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLETLKVVVIPVMIAAAVALGLSRALNSLSLGSDTATALGNRVARTQLTGLVVITVLCGSATAVVGPIAFIGLMMPHLSRWLVGADHRWSLPVTLLATPVLLLFADVVGRLLVPGELRVSVVSAFIGAPVLIFLVRRKRGGDA
>NZ_CP020089.1|WP_058678349.1|1399683_1400931_+|enterobactin-transporter-EntS
MNQKSWLINLSLLKTHPAYRAVFIARFISILSLGLLGVAVPVQIQTLTHSSWLVGLSVTLTGGAMFIGLMIGGVLADRYERKKLILLARGTCGVGFVGLCLNAMLPEPSLLAIYALGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAGVWQMSASEIGVLYAAIPLGAACGALTSGRLAQSARPGLIMLLTTLASFIAMGFFSLMPVWALGVLCLVLFGWLSAISSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGDAIGAAILGGLGAVMTPVASASTSGFALAVVGGILFMVLAELRRFRQEVVLNDGAA
>NZ_CP020089.1|WP_058678351.1|1400977_1401937_-|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKFPAVCRNALLLTGCFVLGLTSAIAADWPRQVTDSRGVHTLESKPTRIVSTSVTLTGSLLAIDAPVVASGATTPNNRVADAQGFLRQWGDMAKQRNVARLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSAIAPTLIINYDDKSWQELLKQLGTITGQEKQAAERIAAFDKQLAQVKQQMTLPPQPVNAIVYTAAAHSANLWTAESAQGQLLHQLGFTLAELPAGLHTSKSQGKRHDIIQLGGENLATGLNGEGLFLFAGDQKDVEAIYANPLLAHLPAVKNKRVWALGTETFRLDYYSAMLVLERLNALFK
>NZ_CP020089.1|WP_038418883.1|1402125_1403301_+|isochorismate-synthase-EntC
MDTSLAEEVQHTATTLPSDSFFFMSPYRSFTTSGCFSRFSEPAEGGDNPSGAFQQKLAQAFRNAKASGIAHPVMVGAIPFDTRKPSSLFIPQHWQTFSRPARQQSARYFSASQALSVETRTEIPPQPVFEEMVARAAALTATPQVNKVVLSRLIDIATDKTIDSGALMERLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGTHFSSLPLAGSARRQPDDVLDREAGNKLLASEKDRHEHDLVTQAMKAILAPRSHHLSMPASPQLITTPTLWHLATPVEGEARENENALTLACLLHPTPALSGFPHQAAKELIAGLEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLLKNRVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH

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Crispr_ID: NZ_CP020089_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020089_3

1719950-1721839

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRT

31 spacers

cas1,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP020089_3

>merge|NZ_CP020089|3|1719950-1721839|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGTACAGGCAGCTTAGAAAAGTTATCCCAAACAAGGCGATTTGGCACCGAGAGTTCACTGCCGTACAGGCAGCTTAGAAATACAGCCTCACCCCGTCAGGGAACGACCAGGCGTTCACTGCCGTACAGGCAGCTTAGAAAACCCCGCACGCTGCGCCGCTCCTTGACCCTCCGTTCACTGCCGTACAGGCAGCTTAGAAAAGTAAAAATCATATTTCGTCTGGCGGGAGAACGTTCACTGCCGTACAGGCAGCTTAGAAAGCTGCACCGTATCTACCTCAGCCCCCACCAAAGTTCACTGCCGTACAGGCAGCTTAGAAAATGCTGGAAAGGAAGGCTGGCAGAAATGCAGTGTTCACTGCCGTACAGGCAGCTTAGAAATGAGTCGCGATTCAGTTCTCGGGAGAACATGAGTTCACTGCCGTACAGGCAGCTTAGAAAAGCGAGGTGTTCACGTTGGCGTATGCACGCTGGTTCACTGCCGTACAGGCAGCTTAGAAAGATAAACAGATGGAGCACCGGTAGCCGGGTGAGTTCACTGCCGTACAGGCAGCTTAGAAAAACAATGCCGGAGAGCTTGCTTATGAGGCTACGTTCACTGCCGTACAGGCAGCTTAGAAACACGCGGCGAGGTGAGTCAGTAATACCGCCGCTGTTCACTGCCGTACAGGCAGCTTAGAAAGTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCCGTTCACTGCCGTACAGGCAGCTTAGAAAGCGCAGCTCCGGCAACCGGGCGCCGCGCCATCGTTCACTGCCGTACAGGCAGCTTAGAAAGGAAGCGCACTCACCAGTTTGATTTAGCGACAGTTCACTGCCGTACAGGCAGCTTAGAAAGCAAATACAAGCACCGCTGGAAGTGTGCGCAGGTTCACTGCCGTACAGGCAGCTTAGAAATGACAATATCCAGATGCTTGCCAGCACCTACGGTTCACTGCCGTACAGGCAGCTTAGAAACTGCCCTGACATTGCACCGACCTGCTCAAGGTGTTCACTGCCGTACAGGCAGCTTAGAAAATCGCCGCCGCTTCGAGCCGCTGCGCGACGAGGTTCACTGCCGTACAGGCAGCTTAGAAAGTTAGCGGATTCGGCGAGGGGTTACATGTTGCGTTCACTGCCGTACAGGCAGCTTAGAAAACATGCGCCGGTTGCGCGCCGCGGTACCCGACGTTCACTGCCGTACAGGCAGCTTAGAAATGTACGCCGTCATAACCGCCTGGAAGAGTGGCGTTCACTGCCGTACAGGCAGCTTAGAAAACCGCCCGCGCTGACACGAAGTACGGATTCACGTTCACTGCCGTACAGGCAGCTTAGAAAGTTCTCGCCGCGCGAGTGCAGCGCCTGACGGTGTTCACTGCAGTACAGGCAGCTTAGAAAAGCGGAAGCCAGTCGGGATAGTCGATAATTGGGTTCACTGCCGTACAGGCAGCTTAGAAATGATTCGTTCCAGTCATATACCACGTTCACTTGTTCACTGCCGTACAGGCAGCTTAGAAATCAGGGACTATCAAGACTTTGGCAATCAAGCTGTTCACTGCCGTACAGGCAGCTTAGAAATTAATTGCAGAGCGAAGCTTACGCGCCGCAGCGTTCACTGCCGTACAGGCAGCTTAGAAATACCATTGTCGCATTCGTGGTTTTGTTAATGGGTTCACTGCCGTACAGGCAGCTTAGAAATGTCATTACTTACGTCGTAGCATGGAGTAACCGTTCACTGCCGTACAGGCAGCTTAGAAAGGGCAAAGACAGCTGCGCTAGCTCTGTGCGGAGTTCACTGCTGTGCAAGTAGCTTAGAAAAATGAACAACATCGACAAACAGGCGCTACACGGTTCACTGCCGCACAGGCAGTACAATTA

>NZ_CP020089|3|1|1719950-1721659|PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTTATCCCAAACAAGGCGATTTGGCACCGAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACAGCCTCACCCCGTCAGGGAACGACCAGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCCGCACGCTGCGCCGCTCCTTGACCCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAAAAATCATATTTCGTCTGGCGGGAGAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGCACCGTATCTACCTCAGCCCCCACCAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATGCTGGAAAGGAAGGCTGGCAGAAATGCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGTCGCGATTCAGTTCTCGGGAGAACATGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCGAGGTGTTCACGTTGGCGTATGCACGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATAAACAGATGGAGCACCGGTAGCCGGGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AACAATGCCGGAGAGCTTGCTTATGAGGCTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	CACGCGGCGAGGTGAGTCAGTAATACCGCCGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCGCAGCTCCGGCAACCGGGCGCCGCGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAAGCGCACTCACCAGTTTGATTTAGCGACA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCAAATACAAGCACCGCTGGAAGTGTGCGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGACAATATCCAGATGCTTGCCAGCACCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGCCCTGACATTGCACCGACCTGCTCAAGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCGCCGCCGCTTCGAGCCGCTGCGCGACGAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTAGCGGATTCGGCGAGGGGTTACATGTTGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACATGCGCCGGTTGCGCGCCGCGGTACCCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTACGCCGTCATAACCGCCTGGAAGAGTGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCGCCCGCGCTGACACGAAGTACGGATTCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTCTCGCCGCGCGAGTGCAGCGCCTGACGGT
GTTCACTGCAGTACAGGCAGCTTAGAAA	AGCGGAAGCCAGTCGGGATAGTCGATAATTGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATTCGTTCCAGTCATATACCACGTTCACTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCAGGGACTATCAAGACTTTGGCAATCAAGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTAATTGCAGAGCGAAGCTTACGCGCCGCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACCATTGTCGCATTCGTGGTTTTGTTAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP020089|3|3|1719950-1721839|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTTATCCCAAACAAGGCGATTTGGCACCGAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACAGCCTCACCCCGTCAGGGAACGACCAGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCCGCACGCTGCGCCGCTCCTTGACCCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAAAAATCATATTTCGTCTGGCGGGAGAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGCACCGTATCTACCTCAGCCCCCACCAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATGCTGGAAAGGAAGGCTGGCAGAAATGCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGTCGCGATTCAGTTCTCGGGAGAACATGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCGAGGTGTTCACGTTGGCGTATGCACGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATAAACAGATGGAGCACCGGTAGCCGGGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AACAATGCCGGAGAGCTTGCTTATGAGGCTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	CACGCGGCGAGGTGAGTCAGTAATACCGCCGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCGCAGCTCCGGCAACCGGGCGCCGCGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAAGCGCACTCACCAGTTTGATTTAGCGACA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCAAATACAAGCACCGCTGGAAGTGTGCGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGACAATATCCAGATGCTTGCCAGCACCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGCCCTGACATTGCACCGACCTGCTCAAGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCGCCGCCGCTTCGAGCCGCTGCGCGACGAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTAGCGGATTCGGCGAGGGGTTACATGTTGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACATGCGCCGGTTGCGCGCCGCGGTACCCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTACGCCGTCATAACCGCCTGGAAGAGTGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCGCCCGCGCTGACACGAAGTACGGATTCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTCTCGCCGCGCGAGTGCAGCGCCTGACGGT
GTTCACTGCAGTACAGGCAGCTTAGAAA	AGCGGAAGCCAGTCGGGATAGTCGATAATTGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATTCGTTCCAGTCATATACCACGTTCACTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCAGGGACTATCAAGACTTTGGCAATCAAGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTAATTGCAGAGCGAAGCTTACGCGCCGCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACCATTGTCGCATTCGTGGTTTTGTTAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTCATTACTTACGTCGTAGCATGGAGTAACC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA
GTTCACTGCTGTGCAAGTAGCTTAGAAA	AATGAACAACATCGACAAACAGGCGCTACACG
GTTCACTGCCGCACAGGCAGTACAATTA

>NZ_CP020089|3|1|1719950-1721779|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTTATCCCAAACAAGGCGATTTGGCACCGAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACAGCCTCACCCCGTCAGGGAACGACCAGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCCGCACGCTGCGCCGCTCCTTGACCCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAAAAATCATATTTCGTCTGGCGGGAGAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGCACCGTATCTACCTCAGCCCCCACCAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATGCTGGAAAGGAAGGCTGGCAGAAATGCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGTCGCGATTCAGTTCTCGGGAGAACATGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCGAGGTGTTCACGTTGGCGTATGCACGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATAAACAGATGGAGCACCGGTAGCCGGGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AACAATGCCGGAGAGCTTGCTTATGAGGCTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	CACGCGGCGAGGTGAGTCAGTAATACCGCCGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGTCAGCCTGGGCGGAAAGTGGCTGTGTGCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCGCAGCTCCGGCAACCGGGCGCCGCGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAAGCGCACTCACCAGTTTGATTTAGCGACA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCAAATACAAGCACCGCTGGAAGTGTGCGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGACAATATCCAGATGCTTGCCAGCACCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGCCCTGACATTGCACCGACCTGCTCAAGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCGCCGCCGCTTCGAGCCGCTGCGCGACGAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTAGCGGATTCGGCGAGGGGTTACATGTTGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACATGCGCCGGTTGCGCGCCGCGGTACCCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTACGCCGTCATAACCGCCTGGAAGAGTGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCGCCCGCGCTGACACGAAGTACGGATTCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTCTCGCCGCGCGAGTGCAGCGCCTGACGGT
GTTCACTGCAGTACAGGCAGCTTAGAAA	AGCGGAAGCCAGTCGGGATAGTCGATAATTGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATTCGTTCCAGTCATATACCACGTTCACTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCAGGGACTATCAAGACTTTGGCAATCAAGCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTAATTGCAGAGCGAAGCTTACGCGCCGCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TACCATTGTCGCATTCGTGGTTTTGTTAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTCATTACTTACGTCGTAGCATGGAGTAACC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA
GTTCACTGCTGTGCAAGTAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020089.1\|WP_058679277.1\|1729969_1730524_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP020089.1\|WP_013097331.1\|1707732_1708632_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP020089.1\|WP_058679278.1\|1728960_1729959_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP020089.1\|WP_058679279.1\|1728011_1728947_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|187867
NZ_CP020089.1\|WP_020689930.1\|1713739_1715680_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP020089.1\|WP_006174393.1\|1716239_1716560_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP020089.1\|WP_023622157.1\|1705935_1707588_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP020089.1\|WP_058679276.1\|1730546_1731020_-\|RES-domain-containing-protein	unknown	unknown	gnl\|CDD\|227941
NZ_CP020089.1\|WP_013097330.1\|1708789_1709485_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP020089.1\|WP_038981400.1\|1731016_1731460_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP020089.1\|WP_008499993.1\|1715750_1715972_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP020089.1\|WP_058679275.1\|1733017_1734739_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP020089.1\|WP_058679282.1\|1712627_1713743_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP020089.1\|WP_058679281.1\|1722113_1723097_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP020089.1\|WP_058679283.1\|1711511_1712468_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP020089.1\|WP_002211347.1\|1731764_1731983_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP020089.1\|WP_013097329.1\|1709856_1711515_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP020089.1\|WP_013097324.1\|1732267_1732972_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP020089.1\|WP_023622164.1\|1716587_1718867_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP020089.1\|WP_058679280.1\|1726704_1728015_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866

Protein	Function_ID	Function_description	E-value
NZ_CP020089.1\|WP_058679277.1\|1729969_1730524_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	9.09989e-96
NZ_CP020089.1\|WP_013097331.1\|1707732_1708632_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	1.02983e-112
NZ_CP020089.1\|WP_058679278.1\|1728960_1729959_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP020089.1\|WP_058679279.1\|1728011_1728947_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	4.0537e-131
NZ_CP020089.1\|WP_020689930.1\|1713739_1715680_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP020089.1\|WP_006174393.1\|1716239_1716560_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP020089.1\|WP_023622157.1\|1705935_1707588_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP020089.1\|WP_058679276.1\|1730546_1731020_-\|RES-domain-containing-protein	gnl\|CDD\|227941	COG5654, COG5654, Uncharacterized conserved protein [Function unknown].	5.68305e-30
NZ_CP020089.1\|WP_013097330.1\|1708789_1709485_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	5.29297e-146
NZ_CP020089.1\|WP_038981400.1\|1731016_1731460_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	1.28163e-45
NZ_CP020089.1\|WP_008499993.1\|1715750_1715972_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	6.50125e-48
NZ_CP020089.1\|WP_058679275.1\|1733017_1734739_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP020089.1\|WP_058679282.1\|1712627_1713743_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP020089.1\|WP_058679281.1\|1722113_1723097_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP020089.1\|WP_058679283.1\|1711511_1712468_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	2.50619e-121
NZ_CP020089.1\|WP_002211347.1\|1731764_1731983_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.9822e-48
NZ_CP020089.1\|WP_013097329.1\|1709856_1711515_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP020089.1\|WP_013097324.1\|1732267_1732972_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.85646e-140
NZ_CP020089.1\|WP_023622164.1\|1716587_1718867_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP020089.1\|WP_058679280.1\|1726704_1728015_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.69539e-167

>NZ_CP020089.1|WP_023622164.1|1716587_1718867_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPNQASDPSNQVNNNEEQAGGEDRMENFTTNLNQLARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVIADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDVTEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPASKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLRTLGNRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTEVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDQAKNELTYDFQSAAKHKPEAAH
>NZ_CP020089.1|WP_006174393.1|1716239_1716560_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA
>NZ_CP020089.1|WP_008499993.1|1715750_1715972_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPIEAETVA
>NZ_CP020089.1|WP_020689930.1|1713739_1715680_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELTDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLSAAQNVEVPAVYAGVERKKRLARAQALLTRLGLAERVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRASRAAAPKEALPAATGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKTNVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYSTISGRIMGQSWLNSITVRVKEGYDSALAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQIFLPGWEIGFSPVAILTAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP020089.1|WP_058679282.1|1712627_1713743_+|macrolide-transporter-subunit-MacA
MNLKGKRRKWFLLLAIVVVAAAYWLWQVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQALAERNLAQVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTVPLSALGESAGDNRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGDEVVTSETLPGAAK
>NZ_CP020089.1|WP_058679283.1|1711511_1712468_-|DUF535-domain-containing-protein
MSSIVDTPYSTLSQPKSGWQLFKSLVTGAITPGLAWQNPAYRRKFALRTLATPLSTARLLSSLAKQPRLMQMLQVQPGLPCRLHRPWLTVNMDRPHALEALNWHYQTMSHHLPAALLKGYLSKQGVTLLTLTGKDEQQFTVRLCADAFLDKEGEATLFFSDHRDTVLAEITFTLCPFEGKSTLFIGGLQGAKAHVPHELIQKATKACHGLFPKRLLVEAVMTLGSAFPVEQIVAVSNATHIYRSWRYRKKKEGKLLADYDSFWISLGGHKQDNGNFELPLAMPRKSMEEIASKKRAEYRRRYELLDSLTEQVTQATRR
>NZ_CP020089.1|WP_013097329.1|1709856_1711515_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEGDLYHFVHDDFWFPPGDVNGREKHLHIILTFRESEPGRHRVRRFRPMSPCWVQSDDGFHRIFYRLEGEMSENEGVLTLREFLDQKGNPIPLDNIDELARHLIRLMPVLRLRDARFMRRIRNGTVPHMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSQSRHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRITTTNSGELLSLTPVEYVCRLVRESSRVSAYRLGPGGMNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNDEREEERDHLTMLPAMDMEHFMYRQGFDDVFHRIAMVPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGIESVPTLLRKMFSRVLWLARGKAD
>NZ_CP020089.1|WP_013097330.1|1708789_1709485_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKEVIGYIVAQVVGGIIAAAVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIVGGILGGVLYRTLLEKRD
>NZ_CP020089.1|WP_013097331.1|1707732_1708632_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIVGYLIPLHQASALRLINRFLSWIVYVILFFMGISLAFLDNLATNLLSILHYSAVTVVVILLCNIAALFWLERTIPWKNHHHQEKLPSRIAMALESLKLCGVVVLGFVLGLTGWPFLQHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMIVAVIVVASSMVAGVINALILDLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLSGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPVLMAFFSA
>NZ_CP020089.1|WP_023622157.1|1705935_1707588_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADASARVDNPMSELQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLIGGCDGARGERNYFTDFATRVPEDCLILTLACGKYRFNKLDFGNIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAVLNEKFGLRSVTTVEEDMQQLLSA
>NZ_CP020089.1|WP_058679281.1|1722113_1723097_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MSVNSITPTDLKTILHSKRANIYYLEKCRIQVNGGRVEYVTQEGKESFYWNIPIANTTAVMLGMGTSVTQMAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLSPQSEYRPTGYLQNWVSFWFDEEKRLLAAKQFQFIRLQQIEKQWAGLRMQRETSFQPGRDALDTILERARRGMENAQDHTSLMLQEAQLTKSLYKLVNQTVGYGCFTRAKRGGGADMANRFLDQGNYLAYGLAAVAAWVTGIPHGLAVMHGKTRRGGLVFDIADLIKDALVMPQAFIAAMEGEDNQQFRQRCINAFQQSDALDVMIATLQETSHSLAGVAK
>NZ_CP020089.1|WP_058679280.1|1726704_1728015_+|type-I-F-CRISPR-associated-protein-Csy1
MSRSVVTAFISEYIAERRQTKLEAFDKEAAKRSDIDSATLAAERRELELRYEPKAWLTDAAKRAGQINLVTHAAKFTHGDSKSSSIYSEAVAKEGYLCTATLSGLETDAVGNAAALDVAKLLQTRAEGGDSLLASLKRGDHAALAAFTDDASQLSEWIAGFSRALTPGEPASHKLAKQNYFPVDDDYHLLSPLFATSLVHALHQKMIAFRFGDDVKAIWKARREKTWHPTPLMLFPDSAEIHFGGTKPQNISYLNSVRGGRSWLLSCQPPQWKRAEKPPTSLRSVFAWGGEFDRRAKSHIQLLVSLLTKAGDYTNFRIREARDGYINMIIDLLFEIASDFQRETAQNWTRNCPDLKPHQQLWLDPWRTKTDEAFRLEREKDDWQDAVAEDFSLWLNARLRKSMPDLGAVEKREWETRERLRANLREMEKIIQEALK
>NZ_CP020089.1|WP_058679279.1|1728011_1728947_+|type-I-F-CRISPR-associated-protein-Csy2
MSSLILLRRVRVENANAVAGLTWGFPAITHFMGFSHALSRRLTEKHGLHIDGCAVVSHEHQIHAHTSGRDYQFALTRNPLTREAKTASFNEEGRMHLTVSLLLECHGEIPNGEYGQRDLAEFLSQICPTLRLAGGIIVDIQNISVMAMPASVREMGRLQWQLMPGFALRDRSSWLGEHHQTLLENNPDATLLDAWLDFASLKMQAEMPDEGDIQEGDPASWHYVPKPKPGYLVPLMTGYQRISELYAPGVVANARDAETPFAFTEAVYGVGEWCGLHRIRSLEDIFWRYRTTETGYYCQGTSAPVTSEPLN
>NZ_CP020089.1|WP_058679278.1|1728960_1729959_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAPTAVKTASVLAFERKLATSDAVMYSGCWEGETWQPIRIQEKAVRGTISNRLKNALTNDPAKLDAEIQKANLQRVDVAALPADADTLQVKFTLRVLGNLSTPSVCNDRAYQEELQQAIDGYIHEHGFAELARRYANNLANGRFLWRNRVGAEKIVVKVTGSQSWTFDAYSYALRDFTARDKSLTELAQEIEKGLSGKGFVLLNVEAQVLLGAGQEIFPSQELVLDSNNSKSRLLYQVDEVAGIHSQKIGNAIRTIDTWHPKVDELGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDNWVTKGQKPDVDQQHYVMAVLIRGGVFGEKSE
>NZ_CP020089.1|WP_058679277.1|1729969_1730524_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEIRVLPDPEFSEEMLMAALVAKLHRALGQRGQGDIGISFPAYAVKPGAILRLHGHRQALNELERLAWRKGLSDYCDCTEIKNVPEVNHWRCVSRVQVKSSAQRLMRRSVKKGWLTEEEAQQRMLTMAEARTDLPWLNLRSLSTGQSFRLFIRHGDLLSAPVTGVFSTYGLSATATIPWF
>NZ_CP020089.1|WP_058679276.1|1730546_1731020_-|RES-domain-containing-protein
MIFYRLVTGRYASEAWSGGGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVKKDTVLNQYQLFSIDIPEEQIEYLDKAWLPEDWQEDPAPMSTMDLGTGWLQSSSALALILPSCIIPYENNAILNPLHPDFHQRLETVQQLPFSFDNRLAEKTAS
>NZ_CP020089.1|WP_038981400.1|1731016_1731460_-|DUF2384-domain-containing-protein
MRTWVPAQKPADNALWRYAGLPANRGMQLIELLSQGLPVSVLDNIHEWTAMSKADILRVTGINERNVARRKSAGRTLTPDESERVARFVRVLDAAVDYFGSKDDAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
>NZ_CP020089.1|WP_002211347.1|1731764_1731983_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP020089.1|WP_013097324.1|1732267_1732972_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHNIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPTQFHLSRSMKRFHAKSPYRVTLNHAFGQVIEGCAEDRHEGTWITRDIITAYHQLHELGYAHSIEVWEGGELVGGMYGVAQGTLFCGESMFSRAVNASKTALLVFCQEFAQRGGQLLDCQVLNEHTASLGAVEISRRHYIEHLDNCRQEKLPRDFWVPRTLFMPNV
>NZ_CP020089.1|WP_058679275.1|1733017_1734739_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLTLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYNFNYMLPAAGVRGTAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARFRQGELLNRVVADVDTLDHLYLRVISPIVGAFVVIVVVTLGLSVLDVAVALTLGGIMLLTLIILPPLFYRAGKSTGENLTRLRGEYRQQLTSWLQGQAELTIFGASERYRARMENTELNWHEAQRRQSELTAFSQALMMLIGGVAVIAMLWMASGGVGNNAQPGPLIALFVFCALAAFEALAPVTGAFQHLGQVIASALRITEIAEQDPEVKFTAEQTATPEQVALTLNNVTFAYDKQAQNALEGISLTVDAGQRIAILGRTGCGKSTLLQLLTRAWDPQQGQIQFNGTPLADFSEQALRKTVSVVPQRVHLFSATLRDNLLLAAPEATDDVLRAMLEQVGLHKLLEDDGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLANVMAGKTVLMVTHRLRGLANFDRIIVMDNGHIIEQGSHAELLTKQGRYYQFKQRL

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Crispr_ID: NZ_CP020089_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020089_4

1799778-1799865

Orphan

Consensus_repeat	Method
CGGTTTTCACCCGTCAGAATCTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020089_4

>merge|NZ_CP020089|4|1799778-1799865|CRISPRCasFinder
CGGTTTTCACCCGTCAGAATCTGACCCTTCAAAATCTGAACCGTCAGATTCTGGATGTTCAAGCGGTTTTCACCCGTCAGATTCTGAC

>NZ_CP020089|4|4|1799778-1799865|CRISPRCasFinder
CGGTTTTCACCCGTCAGAATCTGAC	CCTTCAAAATCTGAACCGTCAGATTCTGGATGTTCAAG
CGGTTTTCACCCGTCAGATTCTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020089.1\|WP_058679239.1\|1796286_1796697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_065187067.1\|1805031_1805313_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|368449
NZ_CP020089.1\|WP_024176468.1\|1798893_1799118_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP020089.1\|WP_058679240.1\|1796677_1796881_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_001283165.1\|1804658_1805045_+\|membrane-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP020089.1\|WP_023315880.1\|1805312_1805855_+\|glycoside-hydrolase-family-108-protein	unknown	unknown	gnl\|CDD\|226439
NZ_CP020089.1\|WP_058679241.1\|1797449_1797881_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|182039
NZ_CP020089.1\|WP_045407358.1\|1803593_1804514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_058679242.1\|1799143_1799440_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_058679247.1\|1805851_1806121_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_058679245.1\|1801238_1802618_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273206
NZ_CP020089.1\|WP_023150198.1\|1798082_1798781_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP020089.1\|WP_058679244.1\|1800363_1801242_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181180
NZ_CP020089.1\|WP_032635101.1\|1795495_1795690_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_032635102.1\|1795689_1796097_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_072205166.1\|1806130_1806751_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020089.1\|WP_080339756.1\|1807510_1808035_+\|DUF1983-domain-containing-protein	unknown	unknown	gnl\|CDD\|370435
NZ_CP020089.1\|WP_058679246.1\|1802645_1803482_+\|antitermination-protein	unknown	unknown	gnl\|CDD\|367572
NZ_CP020089.1\|WP_044901833.1\|1796996_1797383_-\|S24-family-peptidase	unknown	unknown	gnl\|CDD\|119397
NZ_CP020089.1\|WP_042889584.1\|1794671_1795499_-\|serine-protease	unknown	unknown	gnl\|CDD\|366488

Protein	Function_ID	Function_description	E-value
NZ_CP020089.1\|WP_024176468.1\|1798893_1799118_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	3.86624e-24
NZ_CP020089.1\|WP_065187067.1\|1805031_1805313_+\|phage-holin-family-protein	gnl\|CDD\|368449	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	1.63389e-19
NZ_CP020089.1\|WP_001283165.1\|1804658_1805045_+\|membrane-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	2.36318e-36
NZ_CP020089.1\|WP_058679241.1\|1797449_1797881_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|182039	PRK09706, PRK09706, transcriptional repressor DicA; Reviewed.	2.03077e-10
NZ_CP020089.1\|WP_044901833.1\|1796996_1797383_-\|S24-family-peptidase	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.17612e-11
NZ_CP020089.1\|WP_058679245.1\|1801238_1802618_+\|AAA-family-ATPase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	1.07662e-106
NZ_CP020089.1\|WP_023150198.1\|1798082_1798781_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.12901e-27
NZ_CP020089.1\|WP_058679244.1\|1800363_1801242_+\|ATP-binding-protein	gnl\|CDD\|181180	PRK07952, PRK07952, DNA replication protein DnaC; Validated.	2.05211e-35
NZ_CP020089.1\|WP_042889584.1\|1794671_1795499_-\|serine-protease	gnl\|CDD\|366488	pfam01145, Band_7, SPFH domain / Band 7 family. This family has been called SPFH, Band 7 or PHB domain. Recent phylogenetic analysis has shown this domain to be a slipin or Stomatin-like integral membrane domain conserved from protozoa to mammals.	1.48988e-26
NZ_CP020089.1\|WP_080339756.1\|1807510_1808035_+\|DUF1983-domain-containing-protein	gnl\|CDD\|370435	pfam09327, DUF1983, Domain of unknown function (DUF1983). Members of this family of functionally uncharacterized domains are found in various bacteriophage host specificity proteins.	0.000114903
NZ_CP020089.1\|WP_058679246.1\|1802645_1803482_+\|antitermination-protein	gnl\|CDD\|367572	pfam03589, Antiterm, Antitermination protein.	3.39501e-29
NZ_CP020089.1\|WP_023315880.1\|1805312_1805855_+\|glycoside-hydrolase-family-108-protein	gnl\|CDD\|226439	COG3926, zliS, Lysozyme family protein [General function prediction only].	7.02262e-46

>NZ_CP020089.1|WP_058679242.1|1799143_1799440_+|hypothetical-protein
MNHSDFVRKYSFDNPLQRLVMLRILMGGSMDGEGERVIDHQVLYEFCCCSKQAMFKAIKAIERVGFLKVRKIGALDTGLAVRVEPARGYTITPVQEFV
>NZ_CP020089.1|WP_024176468.1|1798893_1799118_+|helix-turn-helix-domain-containing-protein
MNQHVKRAIDILGGQAALARACGVTQPAVFRWLNGSRVKADHVMSIVKATGGEVKAYQIRPDLPDTFPHPGNEV
>NZ_CP020089.1|WP_023150198.1|1798082_1798781_-|helix-turn-helix-transcriptional-regulator
MNTFSDRLQKAMVDAGLTQAELAMKVGVSQPAIWRLVAGKTNTTRKLVEIANALGVSPEWLSTGKNHVPHRQGYVIETMPEREVKDNAGIFRVEVLDLSVSAGPGTFMLSEYVEVLHAIEFTTQHAKSLFGNRSEDVVKVMTVNGDSMASTFNSGDRVFVDISVRHFLTDGVYVFVFGKTFHLKRLQMQGNRLAVLSDNPAYEKWYITEENQDDLYVMGKAIMHESINYNRL
>NZ_CP020089.1|WP_058679241.1|1797449_1797881_-|helix-turn-helix-domain-containing-protein
MNTQITVAKTIGKRILNQRSSLRLSQDFLADHLGLTTETINNWETEKTVPFADQLIQLANILHSDVLWLISGNEQCGDFTEPTSIITSNQLNSWSADIGNCRMALSNAMDCMPTELSAIGTLTIVYEKLDDLQETICKQADKI
>NZ_CP020089.1|WP_044901833.1|1796996_1797383_-|S24-family-peptidase
MQNSVAINQPVKTPQMLFGSDNINDFGNRVQSCRMEGDSMQPTIEPCEVVAFVDCGGRALTSGIYVYTMDAFGRPCLFIKRIEPLADGSLKIISDNHHYETFILNTDEQKEIKIYGRVVASLAVMRLV
>NZ_CP020089.1|WP_058679240.1|1796677_1796881_-|hypothetical-protein
MLSKDSSLETAKNTADNLYQLMELINSNIIDMDIEQIISLSGLCLDLSAQVSIWMGSEFERREKQRN
>NZ_CP020089.1|WP_058679239.1|1796286_1796697_-|hypothetical-protein
MKNNVIETYRRRILKAALLRHQRKTGSNCLVIKLNKGGINTVELTEILLDGLLRKFERLAISEYGNVEGVKAIKGIYSSAVDVNGSGEFLTDSGKELIDELISELVEFVKKQKVEAPKTEGHEMGGSDGTDSDTNS
>NZ_CP020089.1|WP_032635102.1|1795689_1796097_-|hypothetical-protein
MNDKRISTTSIDSAFAKELQPVYVVSRHGYSRRFLSRSAAISNLAHYMVTKTFHRAGLNTNEPDEPVFSNGVLVNRMGQHTQQYLFAHNRCMRRIRRILERKREARKWLGKWDAMHDRFVREQAELQACKPEGLR
>NZ_CP020089.1|WP_032635101.1|1795495_1795690_-|hypothetical-protein
MIAYLRVVLSLVIVASVYGLFVPILISMKDTTAVLSGFALAIMTPPCIYAICKGLVVTVTKEKK
>NZ_CP020089.1|WP_042889584.1|1794671_1795499_-|serine-protease
MKKAIMASIIALSAIGLVGCDRVEPGNVGIKVNKLGDDKGVGEVVGVGRYWTGWNTEVYIFPTFKQMKTYDDAFNFQMSDGTTIGYHIGVAYKVDPTKVTTVFQTYRKGVDDITDTDLRQKIADALNRLASRMSTDKFIDGGKAELLENALKEIQSDMGPVGIQVISLSYVGRPEYPPTVIDSINAKVTANQKTLQREQEVKQREAEANMLRAEADGQADAKLKLAEAEAKSIQIRGQAMRENPEVLQLEAINKWNGTLPQYMTSGANTPFIQVK
>NZ_CP020089.1|WP_058679244.1|1800363_1801242_+|ATP-binding-protein
MLNIKQREEKESLIGERENLREELAFSLEGKKPWRHENWQESIGKANCENHGEYLVHVLTGPEFRGSATVKKSLCSECIKAKLERIESGLRALRVADLMDNAGIARRFETCEFDNYQAINPDAAKNLAACQRYTASWRDRLNAGTGLVMTGNCGTGKNHLAVSMAKSIIRDHLAKVGITDVMRLTRAVKSTWRHNAEITEEDVIERFASLDLLIIDEVGVQFGSPTEMTILQEIINARYESILPTILISNLTFDQLKETIGERIVDRVTDGGRNRLAFGWESFRAIASGVVA
>NZ_CP020089.1|WP_058679245.1|1801238_1802618_+|AAA-family-ATPase
MTPVWKNEDLEGAVIGAIFLRGADPEVLDILSRVPASAFSVPQYREIYTGICRQARGTGVIDPVLLCESMPKHSAIILDSSRIAWAKSALVSYVLTLERNAAVRDAEAVIERALADLRSAHNGDAALSAFRAAQNSIAAISLEEKTVQPVHIDDILPAVVDRVDARNRGLEEARSLMTGIEELDEKTGGIEPTDLVFIAARPSMGKTELALDIIEKVSEQGRGVLFFSMEMPNIQIGERMVSAAGGMSVSRLKKAADFDDEDWARLTNGVERLTGRSIWMVDSTDLTVDQIQQIATRLQLAHPEIALVVVDYLALIKIESTARYDLAVGEVSKGLKRLAKSNKTPVLALSQLSRGVESRPNKRPMNSDLKNSGEIEADADLIMMLYRDEVYNPESPAKGIAEINVTKQRNGELGTIYRRFYNGHFLPIDQELAKQRSAPQQKAQTRRYSKERHSSNADY
>NZ_CP020089.1|WP_058679246.1|1802645_1803482_+|antitermination-protein
MKLEASLKHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALARYAMDVAPKNVRKAAGGQFGWCMQMLAQFAFADYSRSAATSVTCHSCSGTGRTTSEQITRKVSYPWGKAPYWACRSRAVRPSDWEQWTEVTEVVPAVCDACEGKGTISARCRCGGKGEVLDRKATSERGAPVFKTCERCSGNGFSAVPSTAAYKVILKRVPDLHVRTWTRNWKPFLEALVSICQQEEGKAAREFQAVTSSCEESSKV
>NZ_CP020089.1|WP_045407358.1|1803593_1804514_-|hypothetical-protein
MIFLRTENGSEKVDDWELITSRPNFVAKIAKGDHQFEEIIGYYKFKEEIHCGLTGCNQPHQMGYIVKTSRGIETNIGNKCGKNEFGVEFGENVLSFNKFMEIETNREIISTAKDKCDAWKKNIEALRSVKPTIDYLSFAIEKSKNSNFSGRLGAAEIRLLEKNQSGFVTLSEVETDKKTRTILFAMNKHMRDSGEATSEYDMGKVSFTHVLLPENNLRNLFVSISEDIKKIRTIDLSTAPSPEIAETARIAATIEERIKQLKNLKHQAGKFLTKKNLLPIANKIKYSSTAEEIELKNFMGFLGWLK
>NZ_CP020089.1|WP_001283165.1|1804658_1805045_+|membrane-protein
MSDPISGTGLAGGALTGASIYGLLTGTDYGVVFGAFAGAVFYIATAADLSATRRLAYFIVSYIAGILCSGLVGSKLSAWTGYSDKPLDAIGAVIISALAVKILTFLNNQDVGSLVALITRRGGSGGTK
>NZ_CP020089.1|WP_065187067.1|1805031_1805313_+|phage-holin-family-protein
MVLNDPTATLNALLCAGVVITLMFYRRGDSRHRPWVSRLAWLITVTYSAVPLAYLCGIYPHSSWATIGANIIFLSVLVAVRGNVARLVDHLRH
>NZ_CP020089.1|WP_023315880.1|1805312_1805855_+|glycoside-hydrolase-family-108-protein
MTKDEIFNAILGKEGGYVNHPDDKGGPTNWGITQAVARAHGFTGDMRNLTRQQALDILTADYWTGPRFDLVSEVSPAIAAELCDTGVNMGPSVQTKWFQRWLNVFNIQGTLYPDLIADGFIGPRTISALKSYLSRRGKEGELVMLRALNCSQGQRYLELAEQRSANETFVYGWVKERVVI
>NZ_CP020089.1|WP_058679247.1|1805851_1806121_+|hypothetical-protein
MTLEMITGLVVAVFAAIAAAFGLGHSRGTSKAEAKADQQRTEEKAAATEAVAERRVEATKEASNVQQTVNRMPDDDVDRELRDTWKRGS
>NZ_CP020089.1|WP_072205166.1|1806130_1806751_+|hypothetical-protein
MRKTIDLTGVKFGKLTVQSYANKDKSGVSMWLCGCECGTEKIIRSNALRSGRTQSCGCMSGVKHGHRRPSETSPTYISWLSMQRRCNYPGDAYYGDYGGRGISVCERWGNFEAFLKDMGERPAGHTLDRIDVDKAYSPENCRWATPKDQARNRRSNHMLDTPAGRMCITKAAETYGVKVKTIAHRLSRGWSVEKALLTQPWQGNNE
>NZ_CP020089.1|WP_080339756.1|1807510_1808035_+|DUF1983-domain-containing-protein
MIGDAAVSANYSVKMNVNHGGKLHVAGMAVCIEGDQRKVVFEADRFKVNEAAQSASNNEETAFNGGLAFGGFPGAISHDGANPADGNNATAEPISSIASATGTATKTRLTDEMQELVLKAVRESDLFAALQAKIDAQTASVVGLQQAMHEAVNDALRNALKPGGILWNTRSSGL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	30348-30379	0	1.0
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	NZ_LN890526	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence	40713-40744	0	1.0
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MT261384	Salmonella virus PAT1, complete genome	25469-25500	1	0.969
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MT580116	Salmonella phage 65FD, complete genome	17515-17546	1	0.969
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MT580117	Salmonella phage 66FD, complete genome	8353-8384	1	0.969
NZ_CP020089_3	3.17\|1720940\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720940-1720971	32	NC_004775	Enterobacteria phage epsilon15, complete genome	36161-36192	1	0.969
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KU927496	Salmonella phage 101962B_sal5, complete genome	29635-29666	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KU927491	Salmonella phage 146851_sal5, complete genome	30402-30433	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KR296686	Salmonella phage 22, complete genome	169-200	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	NC_002371	Enterobacteria phage P22 virus, complete genome	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KU927495	Salmonella phage 103203_sal4, complete genome	29898-29929	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KR296688	Salmonella phage 34, complete genome	10349-10380	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	M59749	Bacteriophage P22 packaging genes	6060-6091	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KU927498	Salmonella phage 64795_sal4, complete genome	6904-6935	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KU927492	Salmonella phage 146851_sal4, complete genome	6915-6946	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	AF217253	Bacteriophage P22 complete genome	29248-29279	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	NC_030919	Salmonella phage 118970_sal4, complete genome	29927-29958	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	KR296687	Salmonella phage 25, complete genome	10363-10394	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	GQ422451	Enterobacteria phage Phi75, partial genome	28660-28691	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	GQ422450	Enterobacteria phage UAB_Phi20, complete genome	15133-15164	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	AF527608	Bacteriophage P22-pbi, complete sequence	5773-5804	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	6917-6948	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	NC_047875	Salmonella phage UPF_BP1, complete genome	19277-19308	2	0.938
NZ_CP020089_3	3.8\|1720399\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720399-1720430	32	MT932212	Salmonella phage VSe13, complete genome	6051-6082	2	0.938
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	KC911857	Salmonella phage SPC32N, complete genome	1313-1344	2	0.938
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	KC911856	Salmonella phage SPC32H, complete genome	1313-1344	2	0.938
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NC_016761	Salmonella phage SPN1S, complete genome	1342-1373	2	0.938
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	JQ691610	Salmonella phage SPN9TCW, complete genome	1342-1373	2	0.938
NZ_CP020089_3	3.20\|1721120\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721120-1721151	32	HQ201308	Cronobacter phage ENT47670, complete genome	47397-47428	2	0.938
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_CP014649	Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence	49276-49307	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NC_021654	Klebsiella pneumoniae plasmid pKN-LS6, complete sequence	192095-192126	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_CP007729	Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence	156669-156700	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_CP037929	Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence	253224-253255	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MN922301	Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence	253224-253255	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MK416010	Klebsiella phage ST11-OXA245phi3.2, complete genome	28757-28788	3	0.906
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	MK422448	Klebsiella phage ST512-KPC3phi13.3, complete genome	32442-32473	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	CP053324	Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence	35882-35913	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_004313	Salmonella phage ST64B, complete genome	24465-24496	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_006949	Enterobacteria phage ES18, complete genome	30384-30415	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	CP051275	Salmonella phage SW-37, complete genome	22867-22898	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	JQ288021	Salmonella phage SPN3UB, complete genome	37694-37725	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	30384-30415	3	0.906
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	24465-24496	3	0.906
NZ_CP020089_4	4.1\|1799803\|38\|NZ_CP020089\|CRISPRCasFinder	1799803-1799840	38	AJ298298	Bacteriophage P27 complete genome	10703-10740	3	0.921
NZ_CP020089_4	4.1\|1799803\|38\|NZ_CP020089\|CRISPRCasFinder	1799803-1799840	38	NC_003356	Enterobacteria phage phiP27, complete genome	10703-10740	3	0.921
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	45654-45685	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25469-25500	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25469-25500	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25406-25437	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	JQ182733	Enterobacterial phage mEp213, complete genome	26421-26452	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KR296686	Salmonella phage 22, complete genome	22180-22211	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4158-4189	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25469-25500	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KR296688	Salmonella phage 34, complete genome	32369-32400	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AF217253	Bacteriophage P22 complete genome	7220-7251	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KR296687	Salmonella phage 25, complete genome	32376-32407	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25406-25437	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MN856003	Bacteriophage sp. isolate 1, complete genome	31820-31851	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_019706	Enterobacteria phage mEp043 c-1, complete genome	26421-26452	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AF527608	Bacteriophage P22-pbi, complete sequence	25469-25500	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	EU570103	Salmonella phage epsilon34, complete genome	25168-25199	4	0.875
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_047875	Salmonella phage UPF_BP1, complete genome	36129-36160	4	0.875
NZ_CP020089_3	3.1\|1719978\|33\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1719978-1720010	33	MG945491	UNVERIFIED: Microviridae sp. isolate 1258-1602, complete genome	2084-2116	5	0.848
NZ_CP020089_3	3.1\|1719978\|33\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1719978-1720010	33	MH572345	Microviridae sp. isolate SD_SC_53, complete genome	236-268	5	0.848
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP042999	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence	17709-17740	5	0.844
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	HQ201308	Cronobacter phage ENT47670, complete genome	46212-46243	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	45487-45518	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	12195-12226	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	36929-36960	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	116168-116199	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_031077	Enterobacter phage Tyrion, complete genome	39917-39948	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	16647-16678	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	24969-25000	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_004348	Enterobacteria phage ST64T, complete genome	8156-8187	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MW013503	Salmonella virus L cII-101, complete genome	24969-25000	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_010393	Phage Gifsy-2, complete genome	10147-10178	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_010392	Phage Gifsy-1, complete genome	38172-38203	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	25135-25166	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	8156-8187	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	8155-8186	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_004775	Enterobacteria phage epsilon15, complete genome	37198-37229	5	0.844
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ832078	Enterobacteria phage Sf101, complete genome	20979-21010	5	0.844
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	49531-49560	6	0.8
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	436076-436105	6	0.8
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1386373-1386402	6	0.8
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NC_041927	Sphingobium phage Lacusarx, complete genome	102311-102342	6	0.812
NZ_CP020089_3	3.23\|1721300\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721300-1721331	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	511832-511863	6	0.812
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MT774487	Salmonella phage MG40, complete genome	22947-22978	6	0.812
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NC_016158	Escherichia phage HK639, complete genome	41038-41069	6	0.812
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	737346-737375	7	0.767
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	737376-737405	7	0.767
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	735787-735816	7	0.767
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	740034-740063	7	0.767
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	726935-726964	7	0.767
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	737376-737405	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052797	Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence	63456-63485	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	12622-12651	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	129996-130025	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	221022-221051	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	232950-232979	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	231525-231554	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP028316	Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence	128630-128659	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	101317-101346	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP022063	Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence	84260-84289	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052781	Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence	187128-187157	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052834	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence	24105-24134	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052793	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence	43406-43435	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	178361-178390	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052830	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence	211357-211386	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP022662	Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence	73314-73343	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052812	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence	19319-19348	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052810	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence	230399-230428	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052808	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence	11111-11140	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	182227-182256	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052791	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence	185722-185751	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	208172-208201	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1688442-1688471	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052799	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence	24105-24134	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	264943-264972	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	77271-77300	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	298048-298077	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	110008-110037	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052783	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence	176473-176502	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	764-793	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	122769-122798	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP031362	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence	123173-123202	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	109328-109357	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	93338-93367	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	77270-77299	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052824	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence	73851-73880	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052822	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence	93338-93367	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	77270-77299	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052820	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence	77270-77299	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	77270-77299	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	77270-77299	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052816	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598	147671-147700	7	0.767
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	81463-81492	7	0.767
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1054486-1054517	7	0.781
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_CP026561	Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p4_tig6, complete sequence	853-884	7	0.781
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_LT222315	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3	5760-5791	7	0.781
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_LT222315	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3	71377-71408	7	0.781
NZ_CP020089_3	3.15\|1720820\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720820-1720851	32	NZ_LT963397	Pseudomonas cerasi isolate PL963 plasmid PP2, complete sequence	119956-119987	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP047896	Sphingomonas sp. C33 plasmid pC33, complete sequence	58639-58670	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	203867-203898	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	416621-416652	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	59038-59069	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP031116	Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence	131490-131521	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	51175-51206	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1277910-1277941	7	0.781
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	353684-353715	7	0.781
NZ_CP020089_3	3.20\|1721120\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721120-1721151	32	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	33354-33385	7	0.781
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	62056-62087	7	0.781
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	29928-29959	7	0.781
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MH370364	Salmonella phage S107, complete genome	31936-31967	7	0.781
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MH370382	Salmonella phage S135, complete genome	31936-31967	7	0.781
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	MH370383	Salmonella phage S137, complete genome	31936-31967	7	0.781
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NC_022049	Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence	341179-341208	8	0.733
NZ_CP020089_1	1.2\|800965\|30\|NZ_CP020089\|CRISPRCasFinder	800965-800994	30	KP881232	Sinorhizobium phage phiM9, complete genome	86166-86195	8	0.733
NZ_CP020089_3	3.3\|1720099\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720099-1720130	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	637094-637125	8	0.75
NZ_CP020089_3	3.3\|1720099\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720099-1720130	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	495916-495947	8	0.75
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	258097-258128	8	0.75
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	886856-886887	8	0.75
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4550221-4550252	8	0.75
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NZ_CP044329	Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence	30237-30268	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	622934-622965	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	127992-128023	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	MT723940	Mycobacterium phage Ellie, complete genome	57246-57277	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP018821	Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence	50538-50569	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	518667-518698	8	0.75
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_LR594663	Variovorax sp. RA8 plasmid 2	176859-176890	8	0.75
NZ_CP020089_3	3.20\|1721120\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721120-1721151	32	NZ_CP049751	Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence	3977-4008	8	0.75
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	58224-58255	8	0.75
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	56396-56427	8	0.75
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	58346-58377	8	0.75
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	57668-57699	8	0.75
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	MF417874	Uncultured Caudovirales phage clone 3S_14, partial genome	5991-6020	9	0.7
NZ_CP020089_1	1.1\|800911\|30\|NZ_CP020089\|CRISPRCasFinder	800911-800940	30	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	707379-707408	9	0.7
NZ_CP020089_3	3.3\|1720099\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720099-1720130	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	453528-453559	9	0.719
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	335972-336003	9	0.719
NZ_CP020089_3	3.9\|1720459\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720459-1720490	32	KY962008	Escherichia phage ST31, complete genome	13450-13481	9	0.719
NZ_CP020089_3	3.9\|1720459\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720459-1720490	32	NC_023576	Citrobacter phage CR44b complete genome	13571-13602	9	0.719
NZ_CP020089_3	3.9\|1720459\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720459-1720490	32	MT446393	UNVERIFIED: Escherichia virus TH16, complete genome	31963-31994	9	0.719
NZ_CP020089_3	3.9\|1720459\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720459-1720490	32	MT350292	Enterococcus phage EFA-1, complete genome	15217-15248	9	0.719
NZ_CP020089_3	3.9\|1720459\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720459-1720490	32	MT862763	Escherichia phage vB_EcoP-U8, complete genome	33483-33514	9	0.719
NZ_CP020089_3	3.10\|1720519\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720519-1720550	32	NZ_CP019022	Escherichia coli strain Ecol_881 plasmid pEC881_7, complete sequence	1497-1528	9	0.719
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	409818-409849	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	1200710-1200741	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP013072	Sphingobium indicum B90A plasmid pSRL2, complete sequence	71943-71974	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP013454	Burkholderia vietnamiensis strain MSMB608WGS plasmid pMSMB608, complete sequence	64720-64751	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP016354	Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence	92529-92560	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	349858-349889	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	32813-32844	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	51966-51997	9	0.719
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	2179284-2179315	9	0.719
NZ_CP020089_3	3.23\|1721300\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721300-1721331	32	MN586021	Arthrobacter phage Beagle, complete genome	4883-4914	9	0.719
NZ_CP020089_3	3.23\|1721300\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721300-1721331	32	MT889394	Arthrobacter phage Odyssey395, complete genome	5081-5112	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP020897	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence	249596-249627	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013524	Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence	330834-330865	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013553	Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence	328065-328096	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013586	Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence	342123-342154	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013559	Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence	338786-338817	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013576	Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence	339567-339598	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013548	Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence	339563-339594	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013528	Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence	337227-337258	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013533	Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence	339563-339594	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013538	Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence	332276-332307	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013543	Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence	343823-343854	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013564	Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence	328065-328096	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013581	Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence	337230-337261	9	0.719
NZ_CP020089_3	3.24\|1721360\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721360-1721391	32	NZ_CP013570	Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence	339567-339598	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	231801-231832	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019095	Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome	57907-57938	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019107	Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome	53863-53894	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019142	Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome	53657-53688	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019111	Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome	53677-53708	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019155	Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome	53644-53675	9	0.719
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	KJ019085	Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome	53475-53506	9	0.719
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	MK448803	Streptococcus phage Javan551, complete genome	4692-4723	10	0.688
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	MK448981	Streptococcus phage Javan548, complete genome	4692-4723	10	0.688
NZ_CP020089_3	3.6\|1720279\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720279-1720310	32	KC348598	Streptococcus phage phi20c, complete genome	28703-28734	10	0.688
NZ_CP020089_3	3.13\|1720700\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720700-1720731	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	376815-376846	10	0.688
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1849639-1849670	10	0.688
NZ_CP020089_3	3.20\|1721120\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721120-1721151	32	KJ829260	Mycobacterium phage YungJamal, complete genome	2767-2798	10	0.688
NZ_CP020089_3	3.31\|1721780\|32\|NZ_CP020089\|CRISPRCasFinder	1721780-1721811	32	NZ_CP010024	Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence	204907-204938	10	0.688
NZ_CP020089_3	3.16\|1720880\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1720880-1720911	32	MN047793	Xanthomonas phage Xoo-sp13, complete genome	42723-42754	11	0.656
NZ_CP020089_3	3.18\|1721000\|32\|NZ_CP020089\|PILER-CR,CRISPRCasFinder,CRT	1721000-1721031	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	301866-301897	11	0.656
NZ_CP020089_3	3.30\|1721720\|32\|NZ_CP020089\|CRISPRCasFinder,CRT	1721720-1721751	32	NC_010009	Bacillus megaterium QM B1551 plasmid pBM200, complete sequence	3412-3443	11	0.656

1. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 0, identity: 1.0

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
atgctggaaaggaaggctggcagaaatgcagt	Protospacer
********************************

2. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
atgctggaaaggaaggctggcagaaatgcagt	Protospacer
********************************

3. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 1, identity: 0.969

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgtgcgcag	Protospacer
**********.*********************

4. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 1, identity: 0.969

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgtgcgcag	Protospacer
**********.*********************

5. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 1, identity: 0.969

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgtgcgcag	Protospacer
**********.*********************

6. spacer 3.17|1720940|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 1, identity: 0.969

ctgccctgacattgcaccgacctgctcaaggt	CRISPR spacer
ctgccctggcattgcaccgacctgctcaaggt	Protospacer
********.***********************

7. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

8. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

9. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

10. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

11. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

12. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

13. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

14. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

15. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

16. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to M59749 (Bacteriophage P22 packaging genes) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

17. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

18. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

19. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

20. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

21. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

22. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

23. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

24. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

25. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

26. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

27. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

28. spacer 3.8|1720399|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT932212 (Salmonella phage VSe13, complete genome) position: , mismatch: 2, identity: 0.938

agcgaggtgttcacgttggcgtatgcacgctg	CRISPR spacer
agcgaggtgttaacgttggcgtaggcacgctg	Protospacer
*********** *********** ********

29. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 2, identity: 0.938

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgcgcgcag	Protospacer
**********.**************.******

30. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 2, identity: 0.938

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgcgcgcag	Protospacer
**********.**************.******

31. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 2, identity: 0.938

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgcgcgcag	Protospacer
**********.**************.******

32. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 2, identity: 0.938

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaaacaccgctggaagtgcgcgcag	Protospacer
**********.**************.******

33. spacer 3.20|1721120|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to HQ201308 (Cronobacter phage ENT47670, complete genome) position: , mismatch: 2, identity: 0.938

acatgcgccggttgcgcgccgcggtacccgac	CRISPR spacer
acatgcgccggttgtgcgccgcggtaccccac	Protospacer
**************.************** **

34. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014649 (Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

35. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_021654 (Klebsiella pneumoniae plasmid pKN-LS6, complete sequence) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

36. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007729 (Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

37. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037929 (Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

38. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MN922301 (Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

39. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MK416010 (Klebsiella phage ST11-OXA245phi3.2, complete genome) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcatcgctggaagtgcgcgcaa	Protospacer
*************.***********.*****.

40. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MK422448 (Klebsiella phage ST512-KPC3phi13.3, complete genome) position: , mismatch: 3, identity: 0.906

gcaaatacaagcaccgctggaagtgtgcgcag	CRISPR spacer
gcaaatacaagcaccgctggaaatgcgcgcaa	Protospacer
**********************.**.*****.

41. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to CP053324 (Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgtg	Protospacer
*****.***********************..*

42. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgag	Protospacer
*****.***********************. *

43. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgtg	Protospacer
*****.***********************..*

44. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgtg	Protospacer
*****.***********************..*

45. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctactgg	Protospacer
*****.***********************  *

46. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgtg	Protospacer
*****.***********************..*

47. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 3, identity: 0.906

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctacgag	Protospacer
*****.***********************. *

48. spacer 4.1|1799803|38|NZ_CP020089|CRISPRCasFinder matches to AJ298298 (Bacteriophage P27 complete genome) position: , mismatch: 3, identity: 0.921

ccttcaaaatctgaaccgtcagattctggatgttcaag	CRISPR spacer
ccttcaaaatctgaaccgtcagaatctgaatgttcagg	Protospacer
*********************** ****.*******.*

49. spacer 4.1|1799803|38|NZ_CP020089|CRISPRCasFinder matches to NC_003356 (Enterobacteria phage phiP27, complete genome) position: , mismatch: 3, identity: 0.921

ccttcaaaatctgaaccgtcagattctggatgttcaag	CRISPR spacer
ccttcaaaatctgaaccgtcagaatctgaatgttcagg	Protospacer
*********************** ****.*******.*

50. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgcttcgtg	Protospacer
*****.********************* *..*

51. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

52. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

53. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

54. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to JQ182733 (Enterobacterial phage mEp213, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

55. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

56. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

57. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

58. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

59. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

60. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

61. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

62. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

63. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_019706 (Enterobacteria phage mEp043 c-1, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

64. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

65. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

66. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 4, identity: 0.875

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtg	Protospacer
*****.*********************.*..*

67. spacer 3.1|1719978|33|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MG945491 (UNVERIFIED: Microviridae sp. isolate 1258-1602, complete genome) position: , mismatch: 5, identity: 0.848

agttatcccaaacaaggcgatttggcaccgaga	CRISPR spacer
aattatcccaaacaaggcgatttggaacaaaaa	Protospacer
*.*********************** ** .*.*

68. spacer 3.1|1719978|33|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MH572345 (Microviridae sp. isolate SD_SC_53, complete genome) position: , mismatch: 5, identity: 0.848

agttatcccaaacaaggcgatttggcaccgaga	CRISPR spacer
agttatcccagacaaggcgatttggtactgcaa	Protospacer
**********.**************.**.* .*

69. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 5, identity: 0.844

atcgcc-gccgcttcgagccgctgcgcgacgag	CRISPR spacer
-ccgccggccgattcgagccgccgcgcgacgcg	Protospacer
 .**** **** **********.******** *

70. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to HQ201308 (Cronobacter phage ENT47670, complete genome) position: , mismatch: 5, identity: 0.844

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
aacggcagccattcgggatagtcgataatagc	Protospacer
*.*** ***** ***************** *

71. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctaaggt	Protospacer
*****.********************** .

72. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtc	Protospacer
*****.*********************.*..

73. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtc	Protospacer
*****.*********************.*..

74. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgtc	Protospacer
*****.*********************.*..

75. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcgctgcgaa	Protospacer
*****.*********************.*. .

76. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgagcaacatcgacaaacaggcgctgcggg	Protospacer
 ****.*********************.*. *

77. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

78. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

79. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

80. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

81. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

82. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

83. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

84. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacgggcgcttcgtg	Protospacer
*****.**************.****** *..*

85. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggtgctgcgtg	Protospacer
*****.*****************.***.*..*

86. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ832078 (Enterobacteria phage Sf101, complete genome) position: , mismatch: 5, identity: 0.844

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcaacaaacaggcgctgcgtg	Protospacer
*****.*******.*************.*..*

87. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP017753 (Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cagcgccgtcgccgtcatcatggccgccga	Protospacer
.* *.**********.***** *******

88. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cagcgccgtcgccgtcatcatggccgccga	Protospacer
.* *.**********.***** *******

89. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 6, identity: 0.8

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
tattgccaccgccgttaccattgccgccgc	Protospacer
**...**..********.************

90. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_041927 (Sphingobium phage Lacusarx, complete genome) position: , mismatch: 6, identity: 0.812

atcgccg-ccgcttcgagccgctgcgcgacgag	CRISPR spacer
-tcgtggaaggcttcgaggcgctgcgcgacgag	Protospacer
 ***. *   ******** **************

91. spacer 3.23|1721300|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 6, identity: 0.812

gttctcgccgcgcgagtgcagcgcctgacggt--	CRISPR spacer
cttcttgacgcgcgagtgcagcgc--gaaggtcg	Protospacer
 ****.* ****************  ** ***

92. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacaggcagtaacag	Protospacer
*****.******************. **   *

93. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 6, identity: 0.812

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgacaaacatgccgtccaag	Protospacer
*****.*************** **  * ** *

94. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

95. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

96. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

97. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

98. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

99. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 7, identity: 0.767

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
cgtctccgtcgccgtcatcatcgccgccgg	Protospacer
...* **********.*****.*******

100. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052797 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

101. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

102. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

103. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

104. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

105. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

106. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP028316 (Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

107. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

108. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP022063 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

109. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052781 (Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

110. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052834 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

111. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052793 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

112. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

113. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052830 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

114. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP022662 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattccccc	Protospacer
.*******.***.************ .*

115. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052812 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

116. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052810 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

117. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052808 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

118. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

119. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052791 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

120. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

121. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccactggtaccgccattcgacg	Protospacer
.*******.***** **********    *

122. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052799 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

123. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

124. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

125. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

126. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

127. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052783 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

128. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

129. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

130. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP031362 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

131. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

132. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

133. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

134. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052824 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

135. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052822 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

136. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

137. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052820 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

138. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

139. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

140. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052816 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

141. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 7, identity: 0.767

tgccattgtcactgttaccgccattatcag	CRISPR spacer
cgccattgccaccgttaccgccattgcccc	Protospacer
.*******.***.************..*

142. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgcagctccggcaaccgggcgccgcgccatc	CRISPR spacer
gcgcagctccgccaaccgggcgcaggcctcgc	Protospacer
*********** *********** *  *.  *

143. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026561 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p4_tig6, complete sequence) position: , mismatch: 7, identity: 0.781

gcaaatacaagcaccgctggaagtgtgcgcag----	CRISPR spacer
gcaaatacaggcatcgctggaagt----tcagaatc	Protospacer
*********.***.**********     ***

144. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT222315 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3) position: , mismatch: 7, identity: 0.781

gcaaatacaagcaccgctggaagtgtgcgcag----	CRISPR spacer
gcaaatacaggcatcgctggaagt----tcagaatc	Protospacer
*********.***.**********     ***

145. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT222315 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T3) position: , mismatch: 7, identity: 0.781

gcaaatacaagcaccgctggaagtgtgcgcag----	CRISPR spacer
gcaaatacaggcatcgctggaagt----tcagaatc	Protospacer
*********.***.**********     ***

146. spacer 3.15|1720820|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT963397 (Pseudomonas cerasi isolate PL963 plasmid PP2, complete sequence) position: , mismatch: 7, identity: 0.781

gcaaatacaagcaccgctggaagtgtgcgcag----	CRISPR spacer
gcaaatacaggcatcgctggaagt----tcagaatc	Protospacer
*********.***.**********     ***

147. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047896 (Sphingomonas sp. C33 plasmid pC33, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
ggccgctcggcttcgagccgctgcccgacgag	Protospacer
. *  * * *************** *******

148. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tgcggacccgcttcgaggagctgcgcgacgag	Protospacer
  **   **********  *************

149. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
atgtccgccgcttcgggccgctgggcgatggc	Protospacer
**  ***********.******* ****.*.

150. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
agcgcctccgcttcgagccgctccgcctggac	Protospacer
* **** *************** ***   **

151. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031116 (Rubrobacter indicoceani strain SCSIO 08198 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgc-cgcttcgagccgctgcgcgacgag	CRISPR spacer
-ttacggcgggcttcgacccgttgcgcgacgag	Protospacer
 *..* **  ******* ***.***********

152. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
atcgccgcggcttccagccgctggccgttgat	Protospacer
******** ***** ********  ** .**

153. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
accgagcccgcttcgagcgcctgcgcgacgcg	Protospacer
*.**   ***********  ********** *

154. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 7, identity: 0.781

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
accgagcccgcttcgagcgcctgcgcgacgcg	Protospacer
*.**   ***********  ********** *

155. spacer 3.20|1721120|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 7, identity: 0.781

acatgcgccggttgcgcgccgcggtacccgac	CRISPR spacer
tcgcccgacggttgcgggccgcggtacccggc	Protospacer
 *.. ** ******** *************.*

156. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 7, identity: 0.781

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgataaacaggcagtaacag	Protospacer
*****.*********.********. **   *

157. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 7, identity: 0.781

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgataaacaggcagtaacag	Protospacer
*****.*********.********. **   *

158. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgataaacaggcagtaacag	Protospacer
*****.*********.********. **   *

159. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgataaacaggcagtaacag	Protospacer
*****.*********.********. **   *

160. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
aatgagcaacatcgataaacaggcagtaacag	Protospacer
*****.*********.********. **   *

161. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NC_022049 (Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence) position: , mismatch: 8, identity: 0.733

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
ggtttcggtcgccgatatcatggccgccgc	Protospacer
 ... * ******* ****** ********

162. spacer 1.2|800965|30|NZ_CP020089|CRISPRCasFinder matches to KP881232 (Sinorhizobium phage phiM9, complete genome) position: , mismatch: 8, identity: 0.733

tgccattgtcactgttaccgccattatcag	CRISPR spacer
tgccattgccaccgttaccgccagctccgc	Protospacer
********.***.********** . .*.

163. spacer 3.3|1720099|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

accccgcacgctgcgccgctccttgaccctcc	CRISPR spacer
ggcccgcgcgctgcgccgctccgtgccgcgcg	Protospacer
. *****.************** ** * * *

164. spacer 3.3|1720099|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

accccgcacgctgcgccgctccttgaccctcc	CRISPR spacer
ggcccgcgcgctgcgccgctccgtgccgcgcg	Protospacer
. *****.************** ** * * *

165. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 8, identity: 0.75

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
atcctcgaaaggaaggctggcagattgctggt	Protospacer
** ** ******************    ..**

166. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgcagctccggcaaccgggcgccgcgccatc	CRISPR spacer
ctccaactccggcaaccaggcgccgcgcgcgc	Protospacer
 . **.***********.**********   *

167. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

gcgcagctccggcaaccgggcgccgcgccatc--	CRISPR spacer
aggcagctccggcagcccggcgc--cgtcgtcga	Protospacer
. ************.** *****  **.*.**

168. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044329 (Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgcagctccggcaaccgggcgccgcgccatc-	CRISPR spacer
cagcagctccgtcaaccaggcgccg-atcaccg	Protospacer
  ********* *****.******* ..**.*

169. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
acgcctaacgattcgagccgccgcgcgacgag	Protospacer
*.  *.. ** **********.**********

170. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tccgctgccgcttccagccgctgcgctttgcg	Protospacer
 .***.******** ***********  .* *

171. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT723940 (Mycobacterium phage Ellie, complete genome) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
gccctcgcggtttcgagccgctgcgcgacaac	Protospacer
..* .*** *.******************.*

172. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018821 (Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
ttctcgaccgcatcgagctgctgcgcgacgtc	Protospacer
 ** * .**** ******.***********

173. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
aagccggctgcttcgagacgctgcgcgaccac	Protospacer
*   * **.******** *********** *

174. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 8, identity: 0.75

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
aagccggctgcttcgagacgctgcgcgaccac	Protospacer
*   * **.******** *********** *

175. spacer 3.20|1721120|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049751 (Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

acatgcgccggttgcgcgccgcggtacccgac	CRISPR spacer
gctcgcgccggttgcgtgcggcggtacgccag	Protospacer
.* .************.** ******* * *

176. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 8, identity: 0.75

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggacc	Protospacer
 ***************** * ***. *. **

177. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 8, identity: 0.75

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggacc	Protospacer
 ***************** * ***. *. **

178. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 8, identity: 0.75

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
catgaacaacatcgacaacctggcaatggacc	Protospacer
 ***************** * ***. *. **

179. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 8, identity: 0.75

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggacc	Protospacer
 ***************** * ***. *. **

180. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to MF417874 (Uncultured Caudovirales phage clone 3S_14, partial genome) position: , mismatch: 9, identity: 0.7

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
gcccagcgtagccgttatcattgccaaacg	Protospacer
  *** *** ***************.

181. spacer 1.1|800911|30|NZ_CP020089|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

taccaccgtcgccgttatcattgccgccgc	CRISPR spacer
aaagcccgtcgccgttatcatcgccgaaat	Protospacer
 *   ****************.****  ..

182. spacer 3.3|1720099|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 9, identity: 0.719

accccgcacgctgcgccgctccttgaccctcc	CRISPR spacer
ccttccggcgctgcgccgcttcgtgaccctct	Protospacer
 *..*  .************.* ********.

183. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
atgctgaaaaggaaggccggcaggcctatatc	Protospacer
******.**********.*****.  *..* .

184. spacer 3.9|1720459|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KY962008 (Escherichia phage ST31, complete genome) position: , mismatch: 9, identity: 0.719

gataaacagatggagcaccggtagccgggtga	CRISPR spacer
tctcaccatatggagcaccgttagccgggacc	Protospacer
  * * ** *********** ********

185. spacer 3.9|1720459|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_023576 (Citrobacter phage CR44b complete genome) position: , mismatch: 9, identity: 0.719

gataaacagatggagcaccggtagccgggtga	CRISPR spacer
tctcaccatatggagcaccgttagccgggact	Protospacer
  * * ** *********** ********

186. spacer 3.9|1720459|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT446393 (UNVERIFIED: Escherichia virus TH16, complete genome) position: , mismatch: 9, identity: 0.719

gataaacagatggagcaccggtagccgggtga	CRISPR spacer
tctcaccatatggagcaccgttagccgggact	Protospacer
  * * ** *********** ********

187. spacer 3.9|1720459|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT350292 (Enterococcus phage EFA-1, complete genome) position: , mismatch: 9, identity: 0.719

gataaacagatggagcaccggtagccgggtga	CRISPR spacer
tctcaccatatggagcaccgttagccgggact	Protospacer
  * * ** *********** ********

188. spacer 3.9|1720459|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT862763 (Escherichia phage vB_EcoP-U8, complete genome) position: , mismatch: 9, identity: 0.719

gataaacagatggagcaccggtagccgggtga	CRISPR spacer
tctcaccatatggagcaccgttagccgggacc	Protospacer
  * * ** *********** ********

189. spacer 3.10|1720519|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019022 (Escherichia coli strain Ecol_881 plasmid pEC881_7, complete sequence) position: , mismatch: 9, identity: 0.719

aacaatgccggagagcttgcttatgaggctac	CRISPR spacer
gacaatgccggagagtttgattatcgtacttt	Protospacer
.**************.*** **** . .** .

190. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcagctccggcaaccgggcgccgcgccatc	CRISPR spacer
catcagcgccggcagccgggcgccgcgggtgc	Protospacer
   **** ******.************    *

191. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tcggccaccgcttccagccgctgcgcgaactc	Protospacer
 . ***.******* *************

192. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013072 (Sphingobium indicum B90A plasmid pSRL2, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
gcctgttccgcatcgagcggctgcgcgacgac	Protospacer
..*  . **** ****** ************

193. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013454 (Burkholderia vietnamiensis strain MSMB608WGS plasmid pMSMB608, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
aagaaacccgcttcgagccgctggtcgacgaa	Protospacer
*  .   ****************  ******.

194. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016354 (Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
ccggccgccgcttcgagcggctgcacggctgc	Protospacer
 . *************** *****.**.* .

195. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
ccgcccgccgcgtcgagcagctgcgcgccccg	Protospacer
 .  ******* ****** ******** *  *

196. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tccagcagcgcatcgagcggctgcgcgacgac	Protospacer
 .*. *. *** ****** ************

197. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tccagcagcgcatcgagcggctgcgcgacgac	Protospacer
 .*. *. *** ****** ************

198. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
atcgccgccgcttcgaggcactggggcttcac	Protospacer
***************** *.*** *   . *

199. spacer 3.23|1721300|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MN586021 (Arthrobacter phage Beagle, complete genome) position: , mismatch: 9, identity: 0.719

gttctcgccgcgcgagtgcagcgcctgacggt	CRISPR spacer
ggtggcgccgagcgcgtgcagcgcctgatatc	Protospacer
* *  ***** *** *************.. .

200. spacer 3.23|1721300|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MT889394 (Arthrobacter phage Odyssey395, complete genome) position: , mismatch: 9, identity: 0.719

gttctcgccgcgcgagtgcagcgcctgacggt	CRISPR spacer
ggtggcgccgagcgcgtgcagcgcctgatacc	Protospacer
* *  ***** *** *************.. .

201. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020897 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

202. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013524 (Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

203. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

204. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013586 (Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

205. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013559 (Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

206. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013576 (Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

207. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013548 (Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

208. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013528 (Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

209. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013533 (Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

210. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013538 (Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

211. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013543 (Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

212. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

213. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013581 (Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

214. spacer 3.24|1721360|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013570 (Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence) position: , mismatch: 9, identity: 0.719

agcggaagccagtcgggatagtcgataattgg	CRISPR spacer
atcggaaaccagtcgggattgtcgatgccgcc	Protospacer
* *****.*********** ******. .

215. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
gaaaaacatcatcgccaaacaggcgctcggca	Protospacer
.* .**** ***** ************  .*.

216. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019095 (Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

217. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019107 (Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

218. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019142 (Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

219. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019111 (Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

220. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019155 (Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

221. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to KJ019085 (Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome) position: , mismatch: 9, identity: 0.719

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tatgaacaacatcgacaacctggcaatggatc	Protospacer
 ***************** * ***. *. *.

222. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MK448803 (Streptococcus phage Javan551, complete genome) position: , mismatch: 10, identity: 0.688

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
accaaagaaagaaacgctggcagaaatgcttg	Protospacer
*.   .*****.** **************

223. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MK448981 (Streptococcus phage Javan548, complete genome) position: , mismatch: 10, identity: 0.688

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
accaaagaaagaaacgctggcagaaatgcttg	Protospacer
*.   .*****.** **************

224. spacer 3.6|1720279|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KC348598 (Streptococcus phage phi20c, complete genome) position: , mismatch: 10, identity: 0.688

atgctggaaaggaaggctggcagaaatgcagt	CRISPR spacer
accaaagaaagaaacgctggcagaaatgcttg	Protospacer
*.   .*****.** **************

225. spacer 3.13|1720700|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 10, identity: 0.688

gcgcagctccggcaaccgggcgccgcgccatc	CRISPR spacer
cgggccctccgccaaccgggagccgcgccgga	Protospacer
  *   ***** ******** ********.

226. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.688

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
tggagggccgcgccgagccgctgcgcgaccat	Protospacer
   .  ***** .**************** *

227. spacer 3.20|1721120|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to KJ829260 (Mycobacterium phage YungJamal, complete genome) position: , mismatch: 10, identity: 0.688

acatgcgccggttgcgcgccgcggtacccgac	CRISPR spacer
caccccgcccgtcgcgcgccgcggtaccgtgc	Protospacer
   . **** **.***************  .*

228. spacer 3.31|1721780|32|NZ_CP020089|CRISPRCasFinder matches to NZ_CP010024 (Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence) position: , mismatch: 10, identity: 0.688

aatgaacaacatcgacaaacaggcgctacacg	CRISPR spacer
tgggctcagcatcgacaaagaggcgctactga	Protospacer
 . *  **.********** *********  .

229. spacer 3.16|1720880|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to MN047793 (Xanthomonas phage Xoo-sp13, complete genome) position: , mismatch: 11, identity: 0.656

tgacaatatccagatgcttgccagcacctacg	CRISPR spacer
acacaatatccagttgcttgacagcgttgtaa	Protospacer
  *********** ****** ****...   .

230. spacer 3.18|1721000|32|NZ_CP020089|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 11, identity: 0.656

atcgccgccgcttcgagccgctgcgcgacgag	CRISPR spacer
ccaagtgccgcttcgagcagccgcgcgacttc	Protospacer
 . . .************ **.*******

231. spacer 3.30|1721720|32|NZ_CP020089|CRISPRCasFinder,CRT matches to NC_010009 (Bacillus megaterium QM B1551 plasmid pBM200, complete sequence) position: , mismatch: 11, identity: 0.656

gggcaaagacagctgcgctagctctgtgcgga	CRISPR spacer
ccataaagacagctgcgccagctccgtatttc	Protospacer
  ..**************.*****.**..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

613679 : 646776

Escherichia_phage(80.0%)

tRNA,integrase,capsid,transposase

attL 615340:615376|attR 629022:629058

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058678887.1\|613679_614438_+\|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	NA	NA	NA	NA
WP_058678886.1\|614468_615191_+	hypothetical protein	NA	NA	NA	NA
615340:615376	attL	NA	NA	NA	NA
WP_029497222.1\|615924_616293_+	hypothetical protein	NA	NA	NA	NA
WP_058678885.1\|616887_617496_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_159066724.1\|619461_619617_+	hypothetical protein	NA	NA	NA	NA
WP_100160586.1\|619853_620456_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_080347057.1\|621019_621256_+	hypothetical protein	NA	NA	NA	NA
WP_058678882.1\|621245_621587_+	hypothetical protein	NA	NA	NA	NA
WP_058678881.1\|622144_622372_+	hypothetical protein	NA	NA	NA	NA
WP_058678880.1\|622376_622754_+	hypothetical protein	NA	NA	NA	NA
WP_058678879.1\|622772_623810_+\|capsid	major capsid protein E	NA	NA	NA	NA
WP_045615232.1\|623936_624131_+	hypothetical protein	NA	NA	NA	NA
WP_058678878.1\|624130_625996_+	hypothetical protein	A0A291LB80	Escherichia_phage	7.6e-36	29.5
WP_105826554.1\|625996_626674_+	hypothetical protein	A0A1D7XFF4	Escherichia_phage	5.7e-74	73.0
WP_040117157.1\|626707_627379_-	EAL domain-containing protein	NA	NA	NA	NA
WP_040118269.1\|627671_628898_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_058679617.1\|629061_629934_-	HNH endonuclease	NA	NA	NA	NA
629022:629058	attR	NA	NA	NA	NA
WP_159066725.1\|630956_631097_-	hypothetical protein	NA	NA	NA	NA
WP_058679615.1\|631226_632432_+	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	68.8
WP_006797589.1\|632428_633406_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	5.0e-87	54.1
WP_105826555.1\|633561_634266_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	99.6
WP_001752509.1\|634520_635021_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_016947617.1\|635337_636318_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
WP_000780222.1\|636595_636877_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|636857_637187_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	3.1e-17	43.1
WP_001166628.1\|637389_637845_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294653.1\|637916_638312_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000732275.1\|638327_638603_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000522996.1\|638630_639056_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_058679484.1\|639094_640780_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.1e-39	28.9
WP_058679485.1\|640797_641163_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_001087807.1\|641159_641396_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001446012.1\|641379_641499_-	hypothetical protein	NA	NA	NA	NA
WP_000993245.1\|641461_641674_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000118563.1\|641682_642759_-	signal peptidase II	NA	NA	NA	NA
WP_058679486.1\|642755_645161_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.5e-140	46.0
WP_000405672.1\|645246_645681_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000427623.1\|645771_646776_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1196582 : 1302320

104

Enterobacteria_phage(41.46%)

tRNA,tail,terminase,portal,transposase,integrase,plate,head,protease,capsid

attL 1231092:1231114|attR 1305807:1305829

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_105826559.1\|1196582_1197653_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_058679670.1\|1198673_1199141_+	hypothetical protein	NA	NA	NA	NA
WP_058679173.1\|1200317_1201001_-	hypothetical protein	NA	NA	NA	NA
WP_058679172.1\|1201511_1202108_+	hypothetical protein	NA	NA	NA	NA
WP_058679171.1\|1202130_1202487_+	hypothetical protein	NA	NA	NA	NA
WP_058679170.1\|1202674_1204309_-	hypothetical protein	NA	NA	NA	NA
WP_058679169.1\|1204305_1205358_-	hypothetical protein	NA	NA	NA	NA
WP_105578560.1\|1205735_1206365_+	recombinase family protein	NA	NA	NA	NA
WP_072205161.1\|1206579_1206810_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	1.8e-16	63.0
WP_020686138.1\|1207299_1207551_+	hypothetical protein	NA	NA	NA	NA
WP_013095877.1\|1207547_1207763_+	hypothetical protein	NA	NA	NA	NA
WP_058679168.1\|1207841_1209263_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_013095879.1\|1209348_1209960_+	membrane protein	NA	NA	NA	NA
WP_058679167.1\|1210037_1211108_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	3.1e-90	53.7
WP_058679166.1\|1211211_1214277_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	66.2
WP_045292924.1\|1214310_1215132_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_014830896.1\|1215266_1215542_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_058679165.1\|1215522_1217100_-	EAL domain-containing protein	NA	NA	NA	NA
WP_006176933.1\|1217331_1217592_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003859006.1\|1217594_1217735_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_023620096.1\|1217731_1218442_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_058679164.1\|1218543_1220004_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	5.5e-13	25.5
WP_058679163.1\|1219975_1220443_-	hypothetical protein	NA	NA	NA	NA
WP_013095888.1\|1220558_1221110_-	maltose O-acetyltransferase	NA	NA	NA	NA
WP_013095889.1\|1221319_1221538_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_008499288.1\|1221565_1221940_-	Hha toxicity modulator TomB	NA	NA	NA	NA
WP_013095890.1\|1222452_1225599_-	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	6.8e-53	23.5
WP_023620093.1\|1225621_1226815_-	multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA	NA	NA	NA
WP_013095892.1\|1226956_1227610_+	multidrug efflux transporter transcriptional repressor AcrR	NA	NA	NA	NA
WP_038418817.1\|1227723_1231071_+	mechanosensitive channel MscK	NA	NA	NA	NA
WP_058679162.1\|1231072_1231258_-	pleiotropic regulatory protein RsmS	NA	NA	NA	NA
1231092:1231114	attL	NA	NA	NA	NA
WP_020685008.1\|1231270_1231798_-	primosomal replication protein N''	NA	NA	NA	NA
WP_013095896.1\|1231848_1232226_+	DUF454 family protein	NA	NA	NA	NA
WP_000127359.1\|1232377_1232929_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.6e-29	45.9
WP_058679161.1\|1233017_1234946_+	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	6.0e-44	42.9
WP_003858972.1\|1234999_1235332_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_013095898.1\|1235331_1235937_+	recombination protein RecR	NA	NA	NA	NA
WP_058679160.1\|1236047_1237922_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.6e-113	36.9
WP_006809841.1\|1238117_1238762_+	adenylate kinase	NA	NA	NA	NA
WP_013095900.1\|1238886_1239849_+	ferrochelatase	NA	NA	NA	NA
WP_020685011.1\|1239911_1241216_+	inosine/guanosine kinase	NA	NA	NA	NA
WP_040021505.1\|1241306_1242983_-	Kef family K(+) transporter	NA	NA	NA	NA
WP_013095903.1\|1243211_1244432_-	MFS transporter	NA	NA	NA	NA
WP_058679159.1\|1244595_1246248_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_010428207.1\|1246370_1246850_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_013095905.1\|1247049_1247844_-	hypothetical protein	NA	NA	NA	NA
WP_038982812.1\|1247992_1250491_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.5e-111	37.4
WP_080396561.1\|1250766_1250877_-	hypothetical protein	NA	NA	NA	NA
WP_001575870.1\|1250963_1251944_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.2e-184	98.5
WP_010428212.1\|1252854_1253187_-	hypothetical protein	NA	NA	NA	NA
WP_045346406.1\|1253299_1253548_-	hypothetical protein	Q858U4	Yersinia_virus	4.0e-09	50.0
WP_058678844.1\|1253587_1254724_-	phage late control D family protein	B9A7A9	Serratia_phage	3.0e-160	75.5
WP_058678845.1\|1254876_1256058_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.8e-174	76.5
WP_058678846.1\|1256058_1256574_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.4e-59	64.7
WP_058678847.1\|1256622_1256940_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	2.6e-21	56.1
WP_032424037.1\|1256945_1257101_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	2.7e-11	63.3
WP_058678876.1\|1257087_1260054_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	1.2e-261	53.6
WP_058678848.1\|1260068_1260557_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	5.4e-66	74.1
WP_058678849.1\|1260988_1261504_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.1e-12	42.4
WP_058678850.1\|1263704_1264232_-\|tail	phage tail protein I	Q858V5	Yersinia_virus	7.6e-74	75.0
WP_058678851.1\|1264224_1265121_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	7.0e-104	67.4
WP_058678852.1\|1265107_1265476_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.3e-35	64.3
WP_058678853.1\|1265472_1266054_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	3.2e-73	67.9
WP_058678854.1\|1266050_1266689_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	3.5e-57	53.1
WP_058678855.1\|1266681_1267152_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.9e-61	68.0
WP_072189927.1\|1267253_1267466_-	peptidase	NA	NA	NA	NA
WP_058678856.1\|1267362_1267800_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_058678857.1\|1267796_1268342_-	lysozyme	Q1I0Z1	Pasteurella_virus	1.2e-29	41.7
WP_058678858.1\|1268325_1268628_-	hypothetical protein	NA	NA	NA	NA
WP_058678859.1\|1268618_1268819_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	3.7e-21	75.4
WP_058678860.1\|1268818_1269343_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.4e-43	53.5
WP_058678861.1\|1269441_1270299_-\|terminase	terminase	B9A7B6	Serratia_phage	1.2e-68	61.4
WP_058651655.1\|1270344_1271394_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	5.1e-106	53.0
WP_058678862.1\|1271417_1272254_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.4e-101	68.3
WP_058678863.1\|1272413_1274144_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	4.0e-265	75.5
WP_058678864.1\|1274143_1275202_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.2e-142	68.8
WP_058678865.1\|1275880_1278103_-	S8 family peptidase	NA	NA	NA	NA
WP_058678866.1\|1278114_1279254_-	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	4.1e-16	27.4
WP_080396552.1\|1279387_1281802_-	replication endonuclease	F1BUS0	Erwinia_phage	3.9e-133	40.7
WP_058678867.1\|1282011_1282998_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	2.2e-66	46.8
WP_155738256.1\|1282990_1283158_-	hypothetical protein	NA	NA	NA	NA
WP_127353156.1\|1283238_1283520_-	hypothetical protein	NA	NA	NA	NA
WP_045347041.1\|1283733_1284069_-	hypothetical protein	NA	NA	NA	NA
WP_045346978.1\|1284317_1284617_+	helix-turn-helix transcriptional regulator	Q1JS29	Enterobacteria_phage	8.5e-30	59.6
WP_045346979.1\|1284686_1285709_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LA05	Escherichia_phage	4.9e-93	50.2
WP_013095907.1\|1285795_1286206_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_020685017.1\|1286202_1286655_-	NfeD family protein	NA	NA	NA	NA
WP_008499312.1\|1286651_1287566_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_013095909.1\|1287728_1288400_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	1.7e-25	35.7
WP_013095910.1\|1288392_1289175_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_013095911.1\|1289223_1290078_-	co-chaperone YbbN	NA	NA	NA	NA
WP_013095912.1\|1290136_1290907_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_013095913.1\|1290935_1291559_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_013095914.1\|1291529_1292216_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-33	36.4
WP_038982818.1\|1292212_1294627_+	ABC transporter permease	NA	NA	NA	NA
WP_013095916.1\|1294809_1295955_+	porin	NA	NA	NA	NA
WP_058678868.1\|1296038_1297109_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_013095918.1\|1297204_1298272_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_058678869.1\|1298268_1298778_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_020685024.1\|1298938_1299124_-	hypothetical protein	NA	NA	NA	NA
WP_045902393.1\|1299189_1299399_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_023620084.1\|1299539_1300262_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_020685026.1\|1300265_1300760_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_058678870.1\|1300934_1302320_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.1e-44	34.8
1305807:1305829	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1774433 : 1866388

Enterobacteria_phage(32.69%)

tRNA,tail,terminase,portal,integrase,holin,head,protease,capsid

attL 1768426:1768441|attR 1827296:1827311

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1768426:1768441	attL	NA	NA	NA	NA
WP_013097296.1\|1774433_1775213_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_013097295.1\|1775216_1776539_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_013097294.1\|1776519_1777224_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_020689707.1\|1777223_1781672_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_058679356.1\|1781851_1783675_+	L,D-transpeptidase	NA	NA	NA	NA
WP_013097290.1\|1783849_1784401_+	YcbK family protein	NA	NA	NA	NA
WP_058679357.1\|1784421_1785069_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_029882979.1\|1785126_1786317_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_058679358.1\|1786501_1787590_-	porin	Q1MVN1	Enterobacteria_phage	1.0e-101	53.1
WP_029882977.1\|1788971_1790372_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	1.1e-79	36.2
WP_058679235.1\|1790537_1791740_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	4.9e-44	31.6
WP_058679236.1\|1791924_1793217_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.7e-244	95.8
WP_058657756.1\|1793261_1793519_-	excisionase family protein	S4TND0	Salmonella_phage	1.4e-36	91.2
WP_058679237.1\|1793502_1793889_-	hypothetical protein	NA	NA	NA	NA
WP_058679238.1\|1793876_1794626_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	4.8e-122	88.0
WP_042889584.1\|1794671_1795499_-\|protease	serine protease	Q8W654	Enterobacteria_phage	2.2e-112	85.1
WP_032635101.1\|1795495_1795690_-	hypothetical protein	NA	NA	NA	NA
WP_032635102.1\|1795689_1796097_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.2e-23	47.1
WP_058679239.1\|1796286_1796697_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	9.5e-48	88.3
WP_058679240.1\|1796677_1796881_-	hypothetical protein	NA	NA	NA	NA
WP_044901833.1\|1796996_1797383_-	S24 family peptidase	F1C5A0	Cronobacter_phage	1.1e-37	59.1
WP_058679241.1\|1797449_1797881_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023150198.1\|1798082_1798781_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	3.0e-78	62.5
WP_024176468.1\|1798893_1799118_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	1.3e-19	59.7
WP_058679242.1\|1799143_1799440_+	hypothetical protein	NA	NA	NA	NA
WP_058679243.1\|1799436_1800348_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	4.5e-90	59.2
WP_058679244.1\|1800363_1801242_+	ATP-binding protein	Q8W641	Enterobacteria_phage	8.2e-81	61.8
WP_058679245.1\|1801238_1802618_+	AAA family ATPase	Q8W640	Enterobacteria_phage	1.2e-174	68.4
WP_058679246.1\|1802645_1803482_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	1.4e-122	80.7
WP_045407358.1\|1803593_1804514_-	hypothetical protein	A0A1B5FPA3	Escherichia_phage	1.7e-57	72.9
WP_001283165.1\|1804658_1805045_+	membrane protein	A0A192Y8P2	Salmonella_phage	7.3e-58	93.8
WP_065187067.1\|1805031_1805313_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.7e-19	46.2
WP_023315880.1\|1805312_1805855_+	glycoside hydrolase family 108 protein	A0A0U2I1S0	Escherichia_phage	5.2e-78	73.2
WP_058679247.1\|1805851_1806121_+	hypothetical protein	NA	NA	NA	NA
WP_072205166.1\|1806130_1806751_+	hypothetical protein	A0A1B0VMI8	Pseudomonas_phage	9.6e-44	42.7
WP_080339756.1\|1807510_1808035_+	DUF1983 domain-containing protein	G8C7Q4	Escherichia_phage	4.8e-52	68.7
WP_058679248.1\|1808045_1808270_+	hypothetical protein	NA	NA	NA	NA
WP_058679249.1\|1808290_1809748_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	2.6e-273	92.0
WP_072205167.1\|1809791_1810310_+	hypothetical protein	K7PJS8	Enterobacterial_phage	1.7e-46	53.8
WP_058679250.1\|1810290_1810881_+	hypothetical protein	S4TR53	Salmonella_phage	1.9e-94	80.5
WP_072205168.1\|1810880_1811231_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	1.6e-51	81.9
WP_058679251.1\|1811388_1811862_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	6.6e-85	98.1
WP_058679252.1\|1811861_1813598_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	98.8
WP_058679253.1\|1813597_1814902_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	6.8e-233	92.9
WP_058679254.1\|1814915_1815764_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	2.0e-137	91.4
WP_058679255.1\|1815773_1816985_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.5e-194	86.5
WP_058679256.1\|1817027_1817354_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.2e-50	86.1
WP_045326823.1\|1817350_1817695_+\|head	phage head closure protein	Q7Y406	Yersinia_phage	9.4e-25	54.5
WP_058679257.1\|1817675_1818065_+	hypothetical protein	Q6UAX2	Klebsiella_phage	1.9e-42	57.4
WP_058679258.1\|1818061_1818466_+	hypothetical protein	Q6UAX1	Klebsiella_phage	2.2e-44	72.7
WP_045326819.1\|1818498_1818954_+\|tail	major tail shaft subunit	Q6UAX0	Klebsiella_phage	8.9e-63	78.1
WP_045326818.1\|1819018_1819381_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	4.0e-26	53.4
WP_058679259.1\|1819619_1822949_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	66.6
WP_058679260.1\|1822951_1823290_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	4.6e-48	75.9
WP_058679261.1\|1823286_1824042_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.5e-139	94.8
WP_058679262.1\|1824043_1824754_+	peptidase P60	K7PGV2	Enterobacterial_phage	2.2e-145	97.9
WP_058679263.1\|1824782_1825130_+	hypothetical protein	NA	NA	NA	NA
WP_058679264.1\|1825156_1825747_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	1.7e-90	84.7
WP_058679265.1\|1825800_1829631_+	DUF1983 domain-containing protein	Q9MCR7	Enterobacteria_phage	0.0e+00	83.5
1827296:1827311	attR	NA	NA	NA	NA
WP_058679266.1\|1829635_1830601_+	hypothetical protein	G1CSU0	Cronobacter_virus	9.7e-59	40.5
WP_105826562.1\|1830661_1831999_+\|tail	tail fiber domain-containing protein	K7PGY2	Enterobacteria_phage	3.3e-65	40.3
WP_023292714.1\|1832117_1832384_-	DinI family protein	K7PKR6	Enterobacteria_phage	2.1e-40	96.6
WP_058651223.1\|1832811_1835424_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.4e-19	22.4
WP_038985600.1\|1835475_1836246_-	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	38.0
WP_029883221.1\|1836242_1837034_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_058651224.1\|1837043_1838189_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
WP_023619891.1\|1838185_1839148_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_023619892.1\|1839140_1839716_-	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_058651226.1\|1839965_1840976_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_013097268.1\|1841141_1841684_+	cell division protein ZapC	NA	NA	NA	NA
WP_058678402.1\|1841680_1842790_-	MOSC domain-containing protein	V5UTY8	Synechococcus_phage	8.4e-06	42.0
WP_058678401.1\|1842890_1844999_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_058678400.1\|1845011_1846919_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	5.6e-50	28.3
WP_028027912.1\|1846932_1848186_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_013097263.1\|1848190_1849831_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_013097262.1\|1849827_1850394_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_013097261.1\|1850650_1850818_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227926.1\|1850890_1851409_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_013097259.1\|1851477_1853238_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_013097258.1\|1853424_1853877_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_044158562.1\|1853940_1854996_-	porin OmpA	NA	NA	NA	NA
WP_013097256.1\|1855350_1855860_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_013097255.1\|1856077_1856704_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_058678399.1\|1856660_1858823_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_013097253.1\|1858842_1859289_-	YccF domain-containing protein	NA	NA	NA	NA
WP_057072035.1\|1859411_1861466_+	DNA helicase IV	A7KV33	Bacillus_phage	1.6e-18	27.1
WP_013097251.1\|1861549_1862008_-	methylglyoxal synthase	NA	NA	NA	NA
WP_023619904.1\|1862088_1862751_-	DUF2057 family protein	NA	NA	NA	NA
WP_020689684.1\|1862922_1863339_+	CoA-binding protein	NA	NA	NA	NA
WP_013097248.1\|1863372_1863690_-	heat shock protein HspQ	NA	NA	NA	NA
WP_013097247.1\|1863750_1864941_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_058678398.1\|1865033_1865315_+	acylphosphatase	NA	NA	NA	NA
WP_013097245.1\|1865311_1865641_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_013097244.1\|1865728_1866388_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.9e-48	54.9

DBSCAN-SWA_4

3245365 : 3296530

Salmonella_phage(43.55%)

lysis,tail,terminase,transposase,integrase,holin,head

attL 3288050:3288064|attR 3305139:3305153

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029881831.1\|3245365_3246532_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	1.1e-197	86.0
WP_058679660.1\|3246874_3247264_-	hypothetical protein	G8C7R9	Escherichia_phage	2.4e-64	92.2
WP_058679661.1\|3247346_3247613_+	DinI family protein	K7PKM2	Enterobacterial_phage	1.2e-40	97.7
WP_072205148.1\|3249026_3252884_-\|tail	phage tail protein	H6WRW4	Salmonella_phage	0.0e+00	85.5
WP_058679064.1\|3252893_3253427_-\|tail	tail assembly protein	H6WRW3	Salmonella_phage	1.0e-54	67.6
WP_058679066.1\|3253369_3254089_-	C40 family peptidase	A0A1V0E5M9	Salmonella_phage	4.3e-120	81.9
WP_058679063.1\|3254088_3254793_-\|tail	phage minor tail protein L	A0A1V0E5N2	Salmonella_phage	4.3e-133	96.6
WP_058679062.1\|3254829_3255177_-\|tail	phage tail protein	H6WRV8	Salmonella_phage	2.7e-59	93.9
WP_058679061.1\|3255176_3258386_-	tape measure protein	R9TMK1	Aeromonas_phage	1.5e-119	44.7
WP_058679060.1\|3258442_3258757_-	hypothetical protein	H6WRV4	Salmonella_phage	2.0e-37	73.1
WP_017384095.1\|3258858_3259212_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	4.2e-60	100.0
WP_058679059.1\|3259302_3259833_-	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	2.2e-81	85.2
WP_058679058.1\|3260015_3260669_-	hypothetical protein	I6R0Q2	Salmonella_phage	3.0e-112	90.3
WP_017384092.1\|3260710_3261445_-	hypothetical protein	A0A1V0E5P2	Salmonella_phage	2.2e-116	87.2
WP_058679057.1\|3261460_3261847_-	hypothetical protein	I6R9A6	Salmonella_phage	2.3e-64	95.3
WP_058679056.1\|3261843_3262281_-	hypothetical protein	A0A1V0E5P5	Salmonella_phage	7.4e-75	97.9
WP_058679055.1\|3262288_3262651_-	hypothetical protein	A0A1V0E5P3	Salmonella_phage	3.0e-61	90.8
WP_058679054.1\|3262643_3262823_-	DUF551 domain-containing protein	Q5G8X7	Enterobacteria_phage	1.6e-28	96.6
WP_058679053.1\|3262822_3263224_-	hypothetical protein	I6S619	Salmonella_phage	4.7e-60	81.2
WP_058679052.1\|3263286_3263571_-	hypothetical protein	A0A1V0E5P8	Salmonella_phage	1.1e-31	74.2
WP_058679051.1\|3263581_3264679_-	hypothetical protein	G0ZND9	Cronobacter_phage	7.9e-182	84.7
WP_020838514.1\|3264691_3265153_-	hypothetical protein	G0ZND8	Cronobacter_phage	2.6e-62	81.1
WP_058679050.1\|3265165_3266431_-	hypothetical protein	H6WRT2	Salmonella_phage	7.8e-226	94.5
WP_058679049.1\|3266434_3267364_-\|head	phage head morphogenesis protein	H6WRT1	Salmonella_phage	4.5e-138	83.5
WP_058679048.1\|3267317_3268670_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	2.1e-205	77.1
WP_058679047.1\|3268867_3270121_-\|terminase	terminase	I6RSK1	Salmonella_phage	1.2e-213	97.0
WP_045281509.1\|3270117_3270552_-	hypothetical protein	Q716H4	Shigella_phage	2.2e-47	74.8
WP_058679046.1\|3270559_3270778_-	hypothetical protein	NA	NA	NA	NA
WP_058679045.1\|3270848_3271112_-	hypothetical protein	A0A1V0E5Q1	Salmonella_phage	5.5e-33	84.7
WP_058679065.1\|3271897_3272338_-\|lysis	lysis protein	A0A2H4FNE5	Salmonella_phage	6.6e-55	76.4
WP_157843662.1\|3272370_3272847_-	HNH endonuclease	A0A0K1YA40	Cronobacter_phage	2.5e-23	41.5
WP_105826603.1\|3272855_3273302_-	lysozyme	A0A0M4R365	Salmonella_phage	7.9e-56	75.7
WP_058679043.1\|3273285_3273627_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	6.3e-29	54.2
WP_058679042.1\|3273928_3274618_-	antiterminator	I6PDF8	Cronobacter_phage	7.1e-56	51.5
WP_058679041.1\|3274727_3275339_-	protein ninG	M9NYX8	Enterobacteria_phage	3.4e-41	51.2
WP_058679040.1\|3275331_3275502_-	NinE family protein	G8C7V4	Escherichia_phage	2.6e-20	85.7
WP_032647533.1\|3275494_3275944_-	recombination protein NinB	I6R9D0	Salmonella_phage	2.5e-33	47.2
WP_125387033.1\|3276190_3276433_-	hypothetical protein	NA	NA	NA	NA
WP_058679039.1\|3276429_3276795_-	DUF551 domain-containing protein	A0A1V0E5M5	Salmonella_phage	7.7e-09	41.7
WP_080396558.1\|3276791_3277052_-	hypothetical protein	S4TNP2	Salmonella_phage	2.9e-10	68.9
WP_058679037.1\|3277489_3277912_-	HNH endonuclease	C6ZR29	Salmonella_phage	6.7e-65	85.2
WP_017693170.1\|3278440_3278737_-	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	7.1e-29	63.0
WP_058679036.1\|3278978_3279323_-	helix-turn-helix transcriptional regulator	G8C7U7	Escherichia_phage	7.4e-54	92.9
WP_058679035.1\|3279324_3280014_-	phage replication protein	G8C7U6	Escherichia_phage	4.2e-125	96.1
WP_058679034.1\|3280010_3280874_-	hypothetical protein	G8C7U5	Escherichia_phage	2.9e-147	91.6
WP_049012403.1\|3280873_3281566_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_058679033.1\|3281651_3282194_-	hypothetical protein	M9NZI6	Enterobacteria_phage	1.2e-71	77.2
WP_016042179.1\|3282223_3282451_-	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	4.1e-37	100.0
WP_016042178.1\|3282561_3283251_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	2.2e-126	100.0
WP_032655965.1\|3283439_3284387_+	hypothetical protein	A9YX09	Burkholderia_phage	2.0e-61	42.3
WP_015386429.1\|3284475_3285684_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-47	45.7
WP_058679032.1\|3285739_3285937_-	hypothetical protein	G8C7T7	Escherichia_phage	9.2e-25	95.3
WP_058679031.1\|3286283_3286475_+	hypothetical protein	NA	NA	NA	NA
WP_058679030.1\|3286500_3286977_+	hypothetical protein	A0A0B4SK56	Proteus_phage	4.2e-07	33.7
WP_058679029.1\|3287023_3287662_+	hypothetical protein	L0AQZ0	Klebsiella_phage	7.8e-49	43.7
WP_058679028.1\|3287796_3288036_+	hypothetical protein	B5WZV1	Pseudomonas_phage	1.5e-05	43.0
3288050:3288064	attL	NA	NA	NA	NA
WP_017383253.1\|3288118_3288349_+	hypothetical protein	NA	NA	NA	NA
WP_058679027.1\|3288348_3288579_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	7.7e-31	95.5
WP_058679026.1\|3288565_3289012_+	hypothetical protein	NA	NA	NA	NA
WP_058679025.1\|3289082_3290051_+	hypothetical protein	M9P0E1	Enterobacteria_phage	2.7e-85	98.8
WP_058679024.1\|3290058_3290343_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	9.4e-47	92.6
WP_058679023.1\|3290361_3291207_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	9.6e-71	61.6
WP_058679022.1\|3291203_3291884_+	YqaJ viral recombinase family protein	M9NZE1	Enterobacteria_phage	1.6e-129	98.7
WP_058679020.1\|3292347_3292989_+	DNA methyltransferase	G8C7S6	Escherichia_phage	3.0e-109	90.4
WP_159066728.1\|3292978_3293575_+	HNH endonuclease	A0A142IF90	Pseudomonas_phage	4.8e-24	42.3
WP_058679018.1\|3293571_3294666_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	4.6e-142	66.1
WP_058679017.1\|3294662_3294881_+	hypothetical protein	NA	NA	NA	NA
WP_045346713.1\|3295179_3295371_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	5.4e-30	93.7
WP_058679016.1\|3295351_3296530_-\|integrase	site-specific integrase	K7P703	Enterobacteria_phage	4.9e-222	93.6
3305139:3305153	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3320663 : 3332476

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058678688.1\|3320663_3321773_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	2.1e-33	29.8
WP_058678687.1\|3321782_3322193_-	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_058678686.1\|3322192_3322741_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.7e-48	51.9
WP_058678685.1\|3322780_3323587_-	glycosyltransferase	NA	NA	NA	NA
WP_058678684.1\|3323719_3324601_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.6e-108	64.5
WP_058678683.1\|3324653_3325553_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-26	35.0
WP_058678682.1\|3325552_3326638_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-99	52.8
WP_058678681.1\|3326739_3328626_-	polysaccharide biosynthesis protein	L7Y3T9	Megavirus	5.7e-23	27.9
WP_058678680.1\|3328664_3329225_-	sugar O-acyltransferase	NA	NA	NA	NA
WP_058678679.1\|3329217_3330261_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_058678678.1\|3330260_3331205_-	NAD-dependent epimerase/dehydratase family protein	K7QJG5	Escherichia_phage	5.4e-06	29.7
WP_013097865.1\|3331579_3332476_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	9.0e-43	41.9

DBSCAN-SWA_6

3535608 : 3544691

Pseudomonas_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020690664.1\|3535608_3537894_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2D1GNB1	Pseudoalteromonas_phage	1.0e-284	64.0
WP_013098012.1\|3538001_3539132_+	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	6.0e-177	79.4
WP_013098013.1\|3539131_3539386_+	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	5.1e-28	67.9
WP_058678186.1\|3539505_3541197_+\|holin	glucose-methanol-choline oxidoreductase	A0A1V0S9J5	Catovirus	6.1e-24	30.3
WP_058678187.1\|3541090_3542647_+\|holin	glucose-methanol-choline oxidoreductase	A0A1V0SI18	Klosneuvirus	2.9e-36	28.0
WP_058678188.1\|3542678_3543608_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013098017.1\|3543632_3544691_-	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	7.7e-09	50.9

DBSCAN-SWA_7

4336223 : 4374276

Stx2-converting_phage(22.22%)

integrase,transposase

attL 4371270:4371284|attR 4376893:4376907

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000227969.1\|4336223_4337300_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_016151369.1\|4338839_4339190_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	9.6e-41	65.5
WP_007901308.1\|4342724_4343648_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.5e-173	97.4
WP_001101446.1\|4343987_4345013_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_007896426.1\|4345220_4346546_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	6.5e-114	48.1
WP_016151347.1\|4347789_4348311_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_023304425.1\|4348307_4349261_+	fec operon regulator FecR	NA	NA	NA	NA
WP_022652364.1\|4349347_4351672_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_007898890.1\|4351716_4352619_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004118243.1\|4352615_4353614_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118246.1\|4353610_4354567_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	5.3e-17	26.1
WP_004152282.1\|4354567_4355335_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_007898888.1\|4355433_4355727_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.7e-49	95.9
WP_007898884.1\|4356057_4356336_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000427614.1\|4356597_4357602_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_032435706.1\|4358005_4358998_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_007851507.1\|4359367_4360450_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.5e-189	98.1
WP_058679570.1\|4360571_4363646_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_003846917.1\|4363697_4364951_+	lactose permease	NA	NA	NA	NA
WP_003846919.1\|4365007_4365178_+	hypothetical protein	NA	NA	NA	NA
WP_017384068.1\|4366032_4367166_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_085949497.1\|4367500_4368648_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.3e-147	92.6
WP_017384060.1\|4368738_4369167_-	hypothetical protein	NA	NA	NA	NA
WP_017384059.1\|4369170_4371288_-	hypothetical protein	NA	NA	NA	NA
4371270:4371284	attL	NA	NA	NA	NA
WP_007897920.1\|4371275_4373042_-	hypothetical protein	NA	NA	NA	NA
WP_007897923.1\|4373028_4374276_-\|integrase	site-specific integrase	NA	NA	NA	NA
4376893:4376907	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP020090

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17353 : 45227

Escherichia_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032723026.1\|17353_20341_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	9.9e-296	53.6
WP_000470624.1\|20507_21143_+	recombinase family protein	NA	NA	NA	NA
WP_009652884.1\|21170_22007_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000235177.1\|22072_22471_-	VOC family protein	NA	NA	NA	NA
WP_000842086.1\|22512_23622_-	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	3.7e-30	28.1
WP_001141270.1\|23652_23928_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_000510385.1\|24765_25020_+	hypothetical protein	NA	NA	NA	NA
WP_000557557.1\|25037_25313_+	hypothetical protein	NA	NA	NA	NA
WP_004221700.1\|25375_25588_+	hypothetical protein	NA	NA	NA	NA
WP_004221702.1\|25545_25731_+	hypothetical protein	NA	NA	NA	NA
WP_004199413.1\|27395_30413_+\|transposase	Tn3-like element IS3000 family transposase	A0A125RQ78	Bacillus_phage	5.5e-52	24.7
WP_004201164.1\|30804_31617_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|31620_31986_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|31990_32629_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|32639_33671_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004201171.1\|33675_34005_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201172.1\|34198_34489_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|34544_36185_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_015056392.1\|36373_37903_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_032723058.1\|38113_38389_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|38418_39123_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002210513.1\|39574_40336_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002904004.1\|40356_41217_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_001067855.1\|42568_43273_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001549892.1\|43665_43905_-	hypothetical protein	I6PD82	Cronobacter_phage	4.4e-21	55.1
WP_000343760.1\|44006_45227_+\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP020091

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

68052 : 79295

Escherichia_phage(37.5%)

transposase,integrase

attL 68001:68060|attR 75948:76767

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
68001:68060	attL	NA	NA	NA	NA
WP_001067855.1\|68052_68757_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071549088.1\|68781_69294_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|69298_69505_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|69886_71320_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|71353_72568_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|72828_73593_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|73735_74002_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|74222_74696_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000845048.1\|74851_75865_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|75999_76704_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001000602.1\|78143_79295_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	6.7e-99	53.7
75948:76767	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020089

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP020090

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP020091

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection