CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP027394	Escherichia coli O104:H4 strain FDAARGOS_349 chromosome, complete genome	4 crisprs	c2c9_V-U4,DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PrimPol	12	13
NZ_CP027393	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed4	0 crisprs	NA	0	0
NZ_CP027396	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed3	0 crisprs	NA	0	0
NZ_CP027395	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed1	0 crisprs	NA	0	1
NZ_CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	0 crisprs	NA	0	10

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027394_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027394_1

498903-499033

Orphan

Consensus_repeat	Method
CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027394_1

>merge|NZ_CP027394|1|498903-499033|CRISPRCasFinder
CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGTGACTGCACATTGGTGTGACTGCACATCTTCACAGACGGTCCCGGTATCTCCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT

>NZ_CP027394|1|1|498903-499033|CRISPRCasFinder
CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT	GACTGCACATTGGTGTGACTGCACATCTTCACAGACGGTCCCGGTATCT
CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027394.1\|WP_001278450.1\|494952_495057_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000042397.1\|493290_493608_+\|DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225495
NZ_CP027394.1\|WP_000818160.1\|493658_494144_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_CP027394.1\|WP_000437871.1\|499538_499739_-\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|370262
NZ_CP027394.1\|WP_000189936.1\|503860_504070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000119356.1\|494162_494342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000450864.1\|496224_496995_-\|DUF1627-domain-containing-protein	unknown	unknown	gnl\|CDD\|369520
NZ_CP027394.1\|WP_000528776.1\|501129_501906_+\|DUF1828-domain-containing-protein	unknown	unknown	gnl\|CDD\|378071
NZ_CP027394.1\|WP_000198438.1\|502400_502784_+\|antitermination-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000438525.1\|499103_499400_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP027394.1\|WP_000560214.1\|504526_504748_+\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236900
NZ_CP027394.1\|WP_001074607.1\|500599_501142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_001005963.1\|503532_503892_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000887482.1\|494551_494764_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP027394.1\|WP_001118163.1\|495813_496209_-\|DUF977-family-protein	unknown	unknown	gnl\|CDD\|310626
NZ_CP027394.1\|WP_000211196.1\|502787_503501_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_001274758.1\|499839_500553_+\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224885
NZ_CP027394.1\|WP_001390256.1\|497767_498850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000206792.1\|495172_495757_-\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP027394.1\|WP_000790392.1\|497020_497761_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|183482

Protein	Function_ID	Function_description	E-value
NZ_CP027394.1\|WP_000042397.1\|493290_493608_+\|DNA-binding-transcriptional-regulator	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	4.05976e-39
NZ_CP027394.1\|WP_000818160.1\|493658_494144_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	1.3078e-42
NZ_CP027394.1\|WP_000437871.1\|499538_499739_-\|Cro/Cl-family-transcriptional-regulator	gnl\|CDD\|370262	pfam09048, Cro, Cro. Members of this family are involved in the repression of transcription by binding as a homodimer to palindromic DNA operator sites in phage lambda: they repress genes expressed in early phage development and are necessary for the late stage of lytic growth. These proteins have a secondary structure consisting of three alpha-helices and three beta-sheets, and dimerize through interactions between the two antiparallel beta-strands.	3.74824e-29
NZ_CP027394.1\|WP_000528776.1\|501129_501906_+\|DUF1828-domain-containing-protein	gnl\|CDD\|378071	pfam08861, DUF1828, Domain of unknown function DUF1828. This presumed domain is functionally uncharacterized.	2.74329e-08
NZ_CP027394.1\|WP_000450864.1\|496224_496995_-\|DUF1627-domain-containing-protein	gnl\|CDD\|369520	pfam07789, DUF1627, Protein of unknown function (DUF1627). This is a group of sequences found in hypothetical proteins predicted to be expressed in a number of bacterial species. The region in question is approximately 150 amino acid residues long.	4.9108e-46
NZ_CP027394.1\|WP_000438525.1\|499103_499400_-\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	9.68922e-25
NZ_CP027394.1\|WP_000887482.1\|494551_494764_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	9.78112e-16
NZ_CP027394.1\|WP_001118163.1\|495813_496209_-\|DUF977-family-protein	gnl\|CDD\|310626	pfam06163, DUF977, Bacterial protein of unknown function (DUF977). This family consists of several hypothetical bacterial proteins from Escherichia coli and Salmonella typhi. The function of this family is unknown.	3.31887e-62
NZ_CP027394.1\|WP_000560214.1\|504526_504748_+\|cell-division-protein-FtsZ	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	3.68202e-46
NZ_CP027394.1\|WP_001274758.1\|499839_500553_+\|LexA-family-transcriptional-regulator	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	2.78906e-55
NZ_CP027394.1\|WP_000206792.1\|495172_495757_-\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	6.25791e-22
NZ_CP027394.1\|WP_000790392.1\|497020_497761_-\|ATP-binding-protein	gnl\|CDD\|183482	PRK12377, PRK12377, putative replication protein; Provisional.	1.77192e-177

>NZ_CP027394.1|WP_001390256.1|497767_498850_-|hypothetical-protein
MRNYATISPQFWLGETGRKLRKSGPECMVVALYMMTSPHSNMLGLYYLPVLYIAHETGLDPEGASKGLQMACEAGFCSYDHDSEVVWVHEMAAWQVGESLKPGDNRCAGVRNEYSALLENPFLSSFYDRYKDDFHLDVRRESCRKIEAPSEPLSSQEQEQEQEQERDKTLLVHGEKIATDPQGDSCPVLTERPGPTGTTPEADSGRCVQQVLIVEPEQQHQPQQPDADSAMSGKPIGLTREMPGPSAGRVDYPDVFERVWREYPHRAGSNPKKSAFNAWRARLREGVSPDVVLDGVRRYARYLEATGKAGTEFVQQASTFFGPNRNFENPWSLPKAGAVSLRCVNHISEPDTEIPPGFRG
>NZ_CP027394.1|WP_000790392.1|497020_497761_-|ATP-binding-protein
MKNISTGGILERVRRLAPPHVAAPFRTTDEWREWQLAEGRKRSEEINRLNHQARVEKILNRAGIQPLHRKCSFGNYRVQNDGQRHALSQAKSIVDELMTSYTNFVFSGNPGTGKNHLAAAVGNRLLKAGKSVIVVTVADVMSALHASYDDGLSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASLRSVGMLTNLNHAAMSTLLGERIMDRMTMNGGRWVNFNWESWRSNVGRQGM
>NZ_CP027394.1|WP_000450864.1|496224_496995_-|DUF1627-domain-containing-protein
METVLHALKAMGKANSVELAARLDISREEVLNELWELKKNGVVDKTGHTWFLAVEGEAGVTEERPVKSETQDMLTEEVAPKVSADMMIEFISQEGAKTCEELAGKFGVSTRKVASTLAVVTATRRLVREISNGKFRYKMPDVENGDLSALSSQNKQSHHDAENSAAGDEMNRFPLASESTAKASTDEFIREVPSFTEKSASSVMLPSLHAASRELRRAKKQVQKWERVCAALRELNKHRDIVRQIVDSSGRIVSEK
>NZ_CP027394.1|WP_001118163.1|495813_496209_-|DUF977-family-protein
MAKPFTHEQREELKARIIGLVRKNERMTISQLERATGAGWHSVRRCLVDVLACGDLYMSGKYGVFASEQVYRVWRKTPEKTTDQTLIRKLPDGEIRRYDRRLNIICRECRNSEVMQRVLAFYQGNFQEAVL
>NZ_CP027394.1|WP_000206792.1|495172_495757_-|DUF551-domain-containing-protein
MTTFTKEQLISHVSENVKAMKFAVKQTAFKNSLEAIELDLALALVAQASLEAEPVLYMNRFTGKTFSLEEQPGADKEPEIYVPLYAAPPDSAAMLQAGNFREKKGSSTNNFREISETSTNHPVTLDGWISCSERMPDDGQHVIILCDGAFVLYAQYRDGEFFDVVRDGDEFFETQSRNVTDWMPLPEPPQEVRQ
>NZ_CP027394.1|WP_001278450.1|494952_495057_-|hypothetical-protein
MSDDISLAMEGALAVIAVVGVYCLVVFLMDRLGN
>NZ_CP027394.1|WP_000887482.1|494551_494764_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLDTCRLASYAPKGKEKQAMKQQKAMLVALIVICITVVVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
>NZ_CP027394.1|WP_000119356.1|494162_494342_-|hypothetical-protein
MSYALKKHPRLTIPPRDKSVVAAPRPAIDENCTHREQVKNAFDFGFSRYEKAMEELSKV
>NZ_CP027394.1|WP_000818160.1|493658_494144_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MAEIVEGVHYLSFDDLTEINRLLIELQTPDEPVSVLSVDNLSSSQSRPSMVRWYEQTNDMFVLASVLIESLIQNHPFANANKRTAMMAGYVFLLLNGYELTAPGDEIVEMAEGLACKTYTREDLENWLCYWSRAYDSRELCKTGATIVLYETIKLKIEQQN
>NZ_CP027394.1|WP_000042397.1|493290_493608_+|DNA-binding-transcriptional-regulator
MSKNYRSDALASVHEMMESLHDIGAVTKQTMREFDETCLQPAPVMSPERIRALREREHLSQPVFARYLNVSKNLISDWERGVKRPGGAALRLLSVVEKNGIQVIS
>NZ_CP027394.1|WP_000438525.1|499103_499400_-|hypothetical-protein
MEQTSYSKLSQRDIDRAETDLLINLSALTQRGLAKMIGCHESKVSRTDWRYIAAILCAFQMASDISPISRAFQHAINVHANKKRPVGAGRSEQILMNI
>NZ_CP027394.1|WP_000437871.1|499538_499739_-|Cro/Cl-family-transcriptional-regulator
MEQRITLKDYAIRFGQTKTAKDLGVYQSAINKAIHAGRKIFLTINADGSVYAEEIKPFPSNKKTTA
>NZ_CP027394.1|WP_001274758.1|499839_500553_+|LexA-family-transcriptional-regulator
MSAKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILNVSVEEFSPSIAREIYEMYEAVSMQPSLRSEYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQMFLQPLNPQYPMIPCNESCSVVGKVIASQWPEETFG
>NZ_CP027394.1|WP_001074607.1|500599_501142_+|hypothetical-protein
MAKKGDFKPTQKEVDQAITRLKKVTFSGVTWTGSEGRTPIWFKLDLKAFDEIGNPITGIRFMLHWRPPIVEGVDIVKISFVMFLHDRRIYALDPYPADNKPHRNKSIVNHPDFVEVARGPHYHMYFESAGEEIALKLETNIKPDDFFGYWNYFCEALNIIYEGSPPLPNQDKSGQLSWEM
>NZ_CP027394.1|WP_000528776.1|501129_501906_+|DUF1828-domain-containing-protein
MGNVTCSTVISKLGFECHPMSDTLLRVISPFTYYDDCEQISVFVQEMSGQYRVTDYCDTLMNIESRGIHLTKKKIDLIRSSLASQGISLNDSGEISAWADESSVGQVTANVIRGGILASAQTADWYAEVKDDKFEKCVISYLKSAGLGKRLALKEKVKGISGHNITVPLTLRNESRLIPPKRGFTVSLASSKGWNTAHSTVGKIVDLSQVVPDINNRFVIVDSDGLTPELQQLSLLFNDTARVLPFHTRDSWIESLVA
>NZ_CP027394.1|WP_000198438.1|502400_502784_+|antitermination-protein
MTRRTQFKGNSRSHRRERLKAKALANGVLAREEAISSEVLHRPTLSRAQIQAKGTHETPERIEDAKPIKFMAQDVIWQQKEYRRNLERAAIVYANEFGHKQPETGVCLPNVAIYAAGYRKSKQLTAR
>NZ_CP027394.1|WP_000211196.1|502787_503501_+|hypothetical-protein
MTTPSVLPQKLWRPLAEIKNFVEKMPDGVRLTEVTKKVKTFAELSGKERNQLIDFIDKRESIIVFKVRKEGSGNGVTFFRHKKYGYPKREGNVTIIKDLQSKLCTRCGQTKSVNDFYSDASKRDGRAIYCKKCESAMKRSRRECNKLILQQQEPEMNNLKAVSPSPEILRKQAEELLKAAEIAEKKRQEDDAFNKKLAPLKLEILQAAGKMQLKLDEFIDCMDEMNKAVQKLKELTA
>NZ_CP027394.1|WP_001005963.1|503532_503892_+|hypothetical-protein
MNETELKHIIALLLEDARQVYRLSPNSATLTRIQMAEKALKQDNGNGISKFSAASENEVIEINSNISDSCVAYSHQIIRVSARIMEVMASELEKNNIKPTDCCLRTVMNVIYYSMFRSR
>NZ_CP027394.1|WP_000189936.1|503860_504070_-|hypothetical-protein
MTQEEKVMFLMRLAVDTYNTQFREKDIPQKAVPAAVDKGGAIAVFYDAFESFFDEKLDAVSDFGTSSNK
>NZ_CP027394.1|WP_000560214.1|504526_504748_+|cell-division-protein-FtsZ
MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIEKRKLYIRNFTTKTCITDCMIKVFIGRDGLPVKAASL

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Crispr_ID: NZ_CP027394_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027394_2

1848351-1848440

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

1 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP027394_2

>merge|NZ_CP027394|2|1848351-1848440|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACACCTGAAACCAGTTGGCTCGTTGTTCTTCTTTGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP027394|2|2|1848351-1848440|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAAACCAGTTGGCTCGTTGTTCTTCTTTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027394.1\|WP_001090348.1\|1844642_1846070_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP027394.1\|WP_001246104.1\|1843664_1843988_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP027394.1\|WP_000490426.1\|1847231_1848269_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP027394.1\|WP_001173673.1\|1844037_1844643_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP027394.1\|WP_000372108.1\|1846071_1846980_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP027394.1\|WP_000517476.1\|1843159_1843471_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP027394.1\|WP_001233956.1\|1854395_1857095_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP027394.1\|WP_000029329.1\|1852202_1852739_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP027394.1\|WP_001219242.1\|1841951_1842431_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP027394.1\|WP_000144875.1\|1848829_1849750_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP027394.1\|WP_000039843.1\|1859052_1859787_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP027394.1\|WP_000206435.1\|1851135_1852191_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP027394.1\|WP_001295182.1\|1840163_1840925_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP027394.1\|WP_000568956.1\|1840905_1841955_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP027394.1\|WP_000085069.1\|1850378_1851125_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP027394.1\|WP_000246138.1\|1842430_1843141_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP027394.1\|WP_001084093.1\|1852735_1854298_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP027394.1\|WP_000281434.1\|1849746_1850397_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP027394.1\|WP_000063179.1\|1848536_1848830_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP027394.1\|WP_000956458.1\|1858635_1858788_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840

Protein	Function_ID	Function_description	E-value
NZ_CP027394.1\|WP_001090348.1\|1844642_1846070_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP027394.1\|WP_001246104.1\|1843664_1843988_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP027394.1\|WP_000490426.1\|1847231_1848269_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP027394.1\|WP_001173673.1\|1844037_1844643_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP027394.1\|WP_000372108.1\|1846071_1846980_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP027394.1\|WP_000517476.1\|1843159_1843471_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP027394.1\|WP_001233956.1\|1854395_1857095_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.60551e-175
NZ_CP027394.1\|WP_000029329.1\|1852202_1852739_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP027394.1\|WP_001219242.1\|1841951_1842431_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP027394.1\|WP_000144875.1\|1848829_1849750_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.70125e-157
NZ_CP027394.1\|WP_000039843.1\|1859052_1859787_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138
NZ_CP027394.1\|WP_000206435.1\|1851135_1852191_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.81938e-155
NZ_CP027394.1\|WP_001295182.1\|1840163_1840925_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP027394.1\|WP_000568956.1\|1840905_1841955_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP027394.1\|WP_000085069.1\|1850378_1851125_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.67461e-49
NZ_CP027394.1\|WP_000246138.1\|1842430_1843141_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP027394.1\|WP_001084093.1\|1852735_1854298_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP027394.1\|WP_000281434.1\|1849746_1850397_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.16907e-91
NZ_CP027394.1\|WP_000063179.1\|1848536_1848830_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	3.5781e-65
NZ_CP027394.1\|WP_000956458.1\|1858635_1858788_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12

>NZ_CP027394.1|WP_000490426.1|1847231_1848269_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP027394.1|WP_000372108.1|1846071_1846980_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP027394.1|WP_001090348.1|1844642_1846070_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP027394.1|WP_001173673.1|1844037_1844643_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP027394.1|WP_001246104.1|1843664_1843988_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP027394.1|WP_000517476.1|1843159_1843471_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP027394.1|WP_000246138.1|1842430_1843141_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP027394.1|WP_001219242.1|1841951_1842431_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP027394.1|WP_000568956.1|1840905_1841955_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPELSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP027394.1|WP_001295182.1|1840163_1840925_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP027394.1|WP_000063179.1|1848536_1848830_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGKNRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP027394.1|WP_000144875.1|1848829_1849750_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG
>NZ_CP027394.1|WP_000281434.1|1849746_1850397_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQARPAESETFTIECRPFVSELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVKGQAEGRDIWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENTRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP027394.1|WP_000085069.1|1850378_1851125_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHEGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP027394.1|WP_000206435.1|1851135_1852191_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRTPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQSSEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP027394.1|WP_000029329.1|1852202_1852739_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP027394.1|WP_001084093.1|1852735_1854298_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKNHGRWDDIWEDGLEAEKLREALLSLEHAFQFGADSPSFMQDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP027394.1|WP_001233956.1|1854395_1857095_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQESARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPRIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAQAMDIKHYWQKALVQAQNALTVFPPKAETAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLIAAGKAHGLFFGLPTMATANAMYDRLVKTWLSFYSPESRPSLVLAHSARTLMDRFNESLWSGDLIGSEEPDEQAFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWLTHVTKIDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIQVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKYVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCVEQRQDPEMANVILVTDDESCGYSAREGLIGKVG
>NZ_CP027394.1|WP_000956458.1|1858635_1858788_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP027394.1|WP_000039843.1|1859052_1859787_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP027394_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027394_3

1875487-1876308

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

13 spacers

The CRISPR arrays of NZ_CP027394_3

>merge|NZ_CP027394|3|1875487-1876308|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCACGGGGAACTCGCCTGACATTGCAGACGTTACAAATTGAGAGGCGGTTTATCCCCGCTGGCGCGGGGAACTCTAATCACGTTTTAGCGCGCCCTCGTCCGGTTTCGGTTTATCCCCGCTGGCGCGGGGAACTCATCTTCTTGTTCAGGAACGTCAGTAGAGGTGTCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCATTAACCCCCACCAGCTCGACGTGTGTGGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGGGCGTTAACGCGGTGATACTGTTTGACGGCGGTTTATCCCCGCTGGCGCGGGGAACTCACCGAGCGCCGCTGGGAGGCGTATCTCACGTTCGGTTTATCCCCGCTGGCGCGGGGAACTCTGAATGATCGGAAAGACGCTGCAAAGGCAATGCGGTTTATCCCCGCTGGCGCGGGGAACTCATTAAAGGATTATTTTGATGAGTCTGAAAAATCGGTTTATCCCCGCTGGCGCGGGGAACTCTGATTTTGGTGGCGGGGGTGACTGGGGGAATACGGTTTATCCCCGCTGGCGCGGGGAACTCTACCGGTGTGAATTACAGCACCACCGCCACCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCAAACAGGTCGACATGTTTGGCTAACAGCTAACGGTTTATCCCCGCTGGCGCGGGGAACTCCGATAACACAGGGCCGTCAATGCGGCCCTTTTCGGTTTATCCCCGCTGGCGCGGGGAACTCATACCGGGTTTTGCTCCAGCAGCGCCAGTTCCTGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP027394|3|3|1875487-1876308|CRISPRCasFinder
TGGTTTATCCCCGCTGGCACGGGGAACTC	GCCTGACATTGCAGACGTTACAAATTGAGAGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATCACGTTTTAGCGCGCCCTCGTCCGGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCTTCTTGTTCAGGAACGTCAGTAGAGGTGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCATTAACCCCCACCAGCTCGACGTGTGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGGGCGTTAACGCGGTGATACTGTTTGACGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACCGAGCGCCGCTGGGAGGCGTATCTCACGTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGAATGATCGGAAAGACGCTGCAAAGGCAATG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATTAAAGGATTATTTTGATGAGTCTGAAAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATTTTGGTGGCGGGGGTGACTGGGGGAATA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TACCGGTGTGAATTACAGCACCACCGCCACCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAAACAGGTCGACATGTTTGGCTAACAGCTAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGATAACACAGGGCCGTCAATGCGGCCCTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATACCGGGTTTTGCTCCAGCAGCGCCAGTTCC
TGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP027394|3|1|1875487-1876308|CRT
TGGTTTATCCCCGCTGGCACGGGGAACTC	GCCTGACATTGCAGACGTTACAAATTGAGAGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATCACGTTTTAGCGCGCCCTCGTCCGGTTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCTTCTTGTTCAGGAACGTCAGTAGAGGTGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCATTAACCCCCACCAGCTCGACGTGTGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGGGCGTTAACGCGGTGATACTGTTTGACGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACCGAGCGCCGCTGGGAGGCGTATCTCACGTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGAATGATCGGAAAGACGCTGCAAAGGCAATG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATTAAAGGATTATTTTGATGAGTCTGAAAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATTTTGGTGGCGGGGGTGACTGGGGGAATA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TACCGGTGTGAATTACAGCACCACCGCCACCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAAACAGGTCGACATGTTTGGCTAACAGCTAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGATAACACAGGGCCGTCAATGCGGCCCTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATACCGGGTTTTGCTCCAGCAGCGCCAGTTCC
TGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP027394|3|1|1875488-1876308|PILER-CR
GGTTTATCCCCGCTGGCACGGGGAACTC	GCCTGACATTGCAGACGTTACAAATTGAGAGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TAATCACGTTTTAGCGCGCCCTCGTCCGGTTTC
GGTTTATCCCCGCTGGCGCGGGGAACTC	ATCTTCTTGTTCAGGAACGTCAGTAGAGGTGTC
GGTTTATCCCCGCTGGCGCGGGGAACTC	AGCATTAACCCCCACCAGCTCGACGTGTGTGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	GCGGGCGTTAACGCGGTGATACTGTTTGACGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	ACCGAGCGCCGCTGGGAGGCGTATCTCACGTTC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TGAATGATCGGAAAGACGCTGCAAAGGCAATGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	ATTAAAGGATTATTTTGATGAGTCTGAAAAATC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TGATTTTGGTGGCGGGGGTGACTGGGGGAATAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TACCGGTGTGAATTACAGCACCACCGCCACCCC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CAAACAGGTCGACATGTTTGGCTAACAGCTAAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CGATAACACAGGGCCGTCAATGCGGCCCTTTTC
GGTTTATCCCCGCTGGCGCGGGGAACTC	ATACCGGGTTTTGCTCCAGCAGCGCCAGTTCCT
GGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027394.1\|WP_000021321.1\|1870961_1871747_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP027394.1\|WP_000226815.1\|1883317_1885552_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP027394.1\|WP_001387010.1\|1864130_1865402_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP027394.1\|WP_000036723.1\|1878543_1879842_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP027394.1\|WP_001071648.1\|1881794_1882586_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP027394.1\|WP_000186450.1\|1886957_1889714_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP027394.1\|WP_001288227.1\|1877457_1877598_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027394.1\|WP_000039681.1\|1873369_1874848_+\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP027394.1\|WP_000059312.1\|1869437_1870892_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP027394.1\|WP_000147666.1\|1868006_1869416_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP027394.1\|WP_000210878.1\|1879929_1881567_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP027394.1\|WP_001299652.1\|1867249_1868029_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP027394.1\|WP_001164557.1\|1872065_1873343_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP027394.1\|WP_001299097.1\|1866392_1867253_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP027394.1\|WP_000254745.1\|1882656_1882992_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP027394.1\|WP_001130266.1\|1865669_1866245_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP027394.1\|WP_001199973.1\|1876647_1877319_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP027394.1\|WP_000046785.1\|1885599_1886901_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP027394.1\|WP_000109532.1\|1865392_1865653_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP027394.1\|WP_000581937.1\|1882991_1883240_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082

Protein	Function_ID	Function_description	E-value
NZ_CP027394.1\|WP_000021321.1\|1870961_1871747_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP027394.1\|WP_000226815.1\|1883317_1885552_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP027394.1\|WP_001387010.1\|1864130_1865402_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	7.53866e-125
NZ_CP027394.1\|WP_000036723.1\|1878543_1879842_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP027394.1\|WP_001071648.1\|1881794_1882586_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP027394.1\|WP_000186450.1\|1886957_1889714_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP027394.1\|WP_000039681.1\|1873369_1874848_+\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	5.94468e-108
NZ_CP027394.1\|WP_000059312.1\|1869437_1870892_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
NZ_CP027394.1\|WP_000147666.1\|1868006_1869416_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_CP027394.1\|WP_000210878.1\|1879929_1881567_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP027394.1\|WP_001299652.1\|1867249_1868029_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP027394.1\|WP_001164557.1\|1872065_1873343_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	4.01972e-29
NZ_CP027394.1\|WP_001299097.1\|1866392_1867253_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP027394.1\|WP_000254745.1\|1882656_1882992_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
NZ_CP027394.1\|WP_001130266.1\|1865669_1866245_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP027394.1\|WP_001199973.1\|1876647_1877319_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP027394.1\|WP_000046785.1\|1885599_1886901_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP027394.1\|WP_000109532.1\|1865392_1865653_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.6328e-41
NZ_CP027394.1\|WP_000581937.1\|1882991_1883240_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>NZ_CP027394.1|WP_000039681.1|1873369_1874848_+|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTLAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWTWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP027394.1|WP_001164557.1|1872065_1873343_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQFSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP027394.1|WP_000021321.1|1870961_1871747_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP027394.1|WP_000059312.1|1869437_1870892_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP027394.1|WP_000147666.1|1868006_1869416_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP027394.1|WP_001299652.1|1867249_1868029_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP027394.1|WP_001299097.1|1866392_1867253_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP027394.1|WP_001130266.1|1865669_1866245_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP027394.1|WP_000109532.1|1865392_1865653_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP027394.1|WP_001387010.1|1864130_1865402_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARSGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP027394.1|WP_001199973.1|1876647_1877319_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP027394.1|WP_001288227.1|1877457_1877598_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>NZ_CP027394.1|WP_000036723.1|1878543_1879842_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP027394.1|WP_000210878.1|1879929_1881567_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP027394.1|WP_001071648.1|1881794_1882586_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP027394.1|WP_000254745.1|1882656_1882992_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP027394.1|WP_000581937.1|1882991_1883240_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP027394.1|WP_000226815.1|1883317_1885552_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP027394.1|WP_000046785.1|1885599_1886901_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPKLEALLPKVRACLGSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP027394.1|WP_000186450.1|1886957_1889714_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Crispr_ID: NZ_CP027394_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027394_4

4448788-4448884

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027394_4

>merge|NZ_CP027394|4|4448788-4448884|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>NZ_CP027394|4|4|4448788-4448884|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027394.1\|WP_000495400.1\|4445778_4447038_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP027394.1\|WP_001298987.1\|4438085_4439387_+\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP027394.1\|WP_000212252.1\|4450639_4451362_-\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP027394.1\|WP_000006887.1\|4436667_4438029_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP027394.1\|WP_000988366.1\|4456405_4457098_+\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_CP027394.1\|WP_001143543.1\|4453453_4453975_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP027394.1\|WP_000540946.1\|4440682_4441468_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|225796
NZ_CP027394.1\|WP_000855388.1\|4447860_4448754_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP027394.1\|WP_000776555.1\|4455643_4456186_+\|type-1-fimbrial-major-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP027394.1\|WP_001306952.1\|4447048_4447864_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP027394.1\|WP_000255997.1\|4451364_4451859_-\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP027394.1\|WP_000912345.1\|4452032_4453418_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP027394.1\|WP_000815551.1\|4448948_4450016_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP027394.1\|WP_000580806.1\|4444101_4445769_+\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP027394.1\|WP_000190288.1\|4454082_4454295_-\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP027394.1\|WP_001306951.1\|4441478_4442714_-\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP027394.1\|WP_001295318.1\|4450012_4450522_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP027394.1\|WP_000703879.1\|4442735_4443785_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP027394.1\|WP_000729154.1\|4454296_4455163_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP027394.1\|WP_000706355.1\|4439408_4440554_+\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152

Protein	Function_ID	Function_description	E-value
NZ_CP027394.1\|WP_000495400.1\|4445778_4447038_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.67788e-130
NZ_CP027394.1\|WP_001298987.1\|4438085_4439387_+\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP027394.1\|WP_000212252.1\|4450639_4451362_-\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.37025e-165
NZ_CP027394.1\|WP_000006887.1\|4436667_4438029_+\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP027394.1\|WP_000988366.1\|4456405_4457098_+\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	5.84958e-149
NZ_CP027394.1\|WP_001143543.1\|4453453_4453975_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	7.12373e-31
NZ_CP027394.1\|WP_000540946.1\|4440682_4441468_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	4.36926e-152
NZ_CP027394.1\|WP_000855388.1\|4447860_4448754_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP027394.1\|WP_000776555.1\|4455643_4456186_+\|type-1-fimbrial-major-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_CP027394.1\|WP_001306952.1\|4447048_4447864_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
NZ_CP027394.1\|WP_000255997.1\|4451364_4451859_-\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
NZ_CP027394.1\|WP_000912345.1\|4452032_4453418_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP027394.1\|WP_000815551.1\|4448948_4450016_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	1.30115e-179
NZ_CP027394.1\|WP_000580806.1\|4444101_4445769_+\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP027394.1\|WP_000190288.1\|4454082_4454295_-\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP027394.1\|WP_001306951.1\|4441478_4442714_-\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP027394.1\|WP_001295318.1\|4450012_4450522_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP027394.1\|WP_000703879.1\|4442735_4443785_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP027394.1\|WP_000729154.1\|4454296_4455163_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP027394.1\|WP_000706355.1\|4439408_4440554_+\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0

>NZ_CP027394.1|WP_000855388.1|4447860_4448754_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP027394.1|WP_001306952.1|4447048_4447864_+|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP027394.1|WP_000495400.1|4445778_4447038_+|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNPGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMEHGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP027394.1|WP_000580806.1|4444101_4445769_+|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTDFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSLALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLMENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP027394.1|WP_000703879.1|4442735_4443785_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAEQNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPLAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP027394.1|WP_001306951.1|4441478_4442714_-|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVILSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP027394.1|WP_000540946.1|4440682_4441468_-|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP027394.1|WP_000706355.1|4439408_4440554_+|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP027394.1|WP_001298987.1|4438085_4439387_+|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP027394.1|WP_000006887.1|4436667_4438029_+|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>NZ_CP027394.1|WP_000815551.1|4448948_4450016_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFERLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNSPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP027394.1|WP_001295318.1|4450012_4450522_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP027394.1|WP_000212252.1|4450639_4451362_-|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP027394.1|WP_000255997.1|4451364_4451859_-|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP027394.1|WP_000912345.1|4452032_4453418_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP027394.1|WP_001143543.1|4453453_4453975_-|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLICCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR
>NZ_CP027394.1|WP_000190288.1|4454082_4454295_-|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP027394.1|WP_000729154.1|4454296_4455163_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP027394.1|WP_000776555.1|4455643_4456186_+|type-1-fimbrial-major-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP027394.1|WP_000988366.1|4456405_4457098_+|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027394_1	1.1\|498944\|49\|NZ_CP027394\|CRISPRCasFinder	498944-498992	49	KJ603229	Shigella phage POCJ13, complete genome	10125-10173	0	1.0
NZ_CP027394_1	1.1\|498944\|49\|NZ_CP027394\|CRISPRCasFinder	498944-498992	49	NC_029120	Shigella phage 75/02 Stx, complete genome	10125-10173	0	1.0
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	MN693005	Marine virus AFVG_117M50, complete genome	6262-6293	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP038598	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence	2052-2083	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP033827	Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence	693-724	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP029125	Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence	518-549	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	2812-2843	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP030192	Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence	1835-1866	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP039274	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence	118-149	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP016528	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence	53-84	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP030227	Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence	3124-3155	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NC_013090	Endophytic bacterium LOB-07 plasmid pLK39, complete sequence	53-84	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP030009	Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence	2572-2603	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP011606	Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence	3835-3866	7	0.781
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NZ_CP044113	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence	3639-3670	7	0.781
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP038598	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence	2051-2083	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP033827	Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence	692-724	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP029125	Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence	518-550	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	2811-2843	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP030192	Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence	1835-1867	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP039274	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence	118-150	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP016528	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence	52-84	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP030227	Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence	3123-3155	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NC_013090	Endophytic bacterium LOB-07 plasmid pLK39, complete sequence	52-84	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP030009	Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence	2572-2604	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP011606	Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence	3835-3867	7	0.788
NZ_CP027394_3	3.25\|1876187\|33\|NZ_CP027394\|PILER-CR	1876187-1876219	33	NZ_CP044113	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence	3638-3670	7	0.788
NZ_CP027394_3	3.3\|1875638\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875638-1875669	32	MK016501	Mycobacterium phage Nebkiss, complete genome	21454-21485	8	0.75
NZ_CP027394_3	3.3\|1875638\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875638-1875669	32	NC_026590	Mycobacterium phage Gaia, complete genome	21453-21484	8	0.75
NZ_CP027394_3	3.5\|1875760\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875760-1875791	32	NZ_CP010769	Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence	121002-121033	8	0.75
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	MK295204	Shigella phage vB_SdyM_006, complete genome	16122-16153	8	0.75
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	MG696114	Proteus phage phiP4-3, complete genome	149804-149835	8	0.75
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	NZ_CP017949	Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence	58006-58037	8	0.75
NZ_CP027394_3	3.10\|1876065\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876065-1876096	32	AB452989	Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds	1966-1997	8	0.75
NZ_CP027394_3	3.12\|1876187\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876187-1876218	32	NC_019341	Pseudomonas syringae plasmid pNCPPB880-40, complete sequence	6612-6643	8	0.75
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP012265	Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence	26063-26094	8	0.75
NZ_CP027394_3	3.16\|1875638\|33\|NZ_CP027394\|PILER-CR	1875638-1875670	33	MK016501	Mycobacterium phage Nebkiss, complete genome	21453-21485	8	0.758
NZ_CP027394_3	3.16\|1875638\|33\|NZ_CP027394\|PILER-CR	1875638-1875670	33	NC_026590	Mycobacterium phage Gaia, complete genome	21452-21484	8	0.758
NZ_CP027394_3	3.21\|1875943\|33\|NZ_CP027394\|PILER-CR	1875943-1875975	33	MN693005	Marine virus AFVG_117M50, complete genome	6262-6294	8	0.758
NZ_CP027394_3	3.26\|1876248\|33\|NZ_CP027394\|PILER-CR	1876248-1876280	33	NZ_CP012265	Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence	26062-26094	8	0.758
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	5394-5425	9	0.719
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	KC821606	Cellulophaga phage phi12:2, complete genome	1257-1288	9	0.719
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	KT070867	Bacillus phage PBC2, complete genome	154855-154886	9	0.719
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	460266-460297	9	0.719
NZ_CP027394_3	3.21\|1875943\|33\|NZ_CP027394\|PILER-CR	1875943-1875975	33	MK295204	Shigella phage vB_SdyM_006, complete genome	16121-16153	9	0.727
NZ_CP027394_3	3.21\|1875943\|33\|NZ_CP027394\|PILER-CR	1875943-1875975	33	MG696114	Proteus phage phiP4-3, complete genome	149804-149836	9	0.727
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	KC821631	Cellulophaga phage phi48:1, complete genome	1257-1288	10	0.688
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	KC821628	Cellulophaga phage phi18:4, complete genome	1257-1288	10	0.688
NZ_CP027394_3	3.8\|1875943\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875943-1875974	32	NC_021805	Cellulophaga phage phi12a:1, complete genome	1257-1288	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1538980-1539011	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1187025-1187056	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1615960-1615991	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1459996-1460027	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1531874-1531905	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1459018-1459049	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1526371-1526402	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1526372-1526403	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1459988-1460019	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1459341-1459372	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1459978-1460009	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1539145-1539176	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1539126-1539157	10	0.688
NZ_CP027394_3	3.13\|1876248\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1876248-1876279	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1539107-1539138	10	0.688
NZ_CP027394_3	3.21\|1875943\|33\|NZ_CP027394\|PILER-CR	1875943-1875975	33	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	5394-5426	10	0.697
NZ_CP027394_3	3.4\|1875699\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875699-1875730	32	KU160664	Arthrobacter phage Salgado, complete genome	140-171	11	0.656
NZ_CP027394_3	3.4\|1875699\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875699-1875730	32	MF140418	Arthrobacter phage LiSara, complete genome	140-171	11	0.656
NZ_CP027394_3	3.4\|1875699\|32\|NZ_CP027394\|CRISPRCasFinder,CRT	1875699-1875730	32	KU160654	Arthrobacter phage Laroye, complete genome	140-171	11	0.656

1. spacer 1.1|498944|49|NZ_CP027394|CRISPRCasFinder matches to KJ603229 (Shigella phage POCJ13, complete genome) position: , mismatch: 0, identity: 1.0

gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	CRISPR spacer
gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	Protospacer
*************************************************

2. spacer 1.1|498944|49|NZ_CP027394|CRISPRCasFinder matches to NC_029120 (Shigella phage 75/02 Stx, complete genome) position: , mismatch: 0, identity: 1.0

gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	CRISPR spacer
gactgcacattggtgtgactgcacatcttcacagacggtcccggtatct	Protospacer
*************************************************

3. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 7, identity: 0.781

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
agttatagattattttgatgagtatgaacaaa	Protospacer
* * * .**************** **** **

4. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

5. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

6. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

7. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

8. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

9. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

10. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

11. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

12. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

13. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

14. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

15. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

----cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
tctccga----aaagggccgctaatgcggccctttt	Protospacer
    ***    * *******..**************

16. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

17. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

18. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

19. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

20. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

21. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

22. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

23. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

24. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

25. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

26. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

27. spacer 3.25|1876187|33|NZ_CP027394|PILER-CR matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

----cgataacacagggccgtcaatgcggcccttttc	CRISPR spacer
tctccga----aaagggccgctaatgcggcccttttc	Protospacer
    ***    * *******..***************

28. spacer 3.3|1875638|32|NZ_CP027394|CRISPRCasFinder,CRT matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.75

atcttcttgttcaggaacgtcagtagaggtgt	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgt	Protospacer
**   . .***********.****.*******

29. spacer 3.3|1875638|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.75

atcttcttgttcaggaacgtcagtagaggtgt	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgt	Protospacer
**   . .***********.****.*******

30. spacer 3.5|1875760|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 8, identity: 0.75

gcgggcgttaacgcggtgatactgtttgacgg	CRISPR spacer
ttgatcgttaacgcgatgctactgtttgtggg	Protospacer
 .*. **********.** *********  **

31. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.75

-----attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaac	Protospacer
     **     ************** * *******.

32. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.75

-----attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaac	Protospacer
     **     ************** * *******.

33. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

attaaaggattattttgatgagtctgaaaaat-----	CRISPR spacer
attaaaggattatttagatgggtt-----aatcactg	Protospacer
*************** ****.**.     ***

34. spacer 3.10|1876065|32|NZ_CP027394|CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75

taccggtgtgaattacagcaccaccgccaccc	CRISPR spacer
ggccggtgtgaacaacagcaccaccacgcgcc	Protospacer
 .**********. ***********.*   **

35. spacer 3.12|1876187|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_019341 (Pseudomonas syringae plasmid pNCPPB880-40, complete sequence) position: , mismatch: 8, identity: 0.75

cgataacacagggccgtcaatgcggccctttt	CRISPR spacer
caaattaaaagggccgctaatgcggccctttt	Protospacer
*.*    * *******..**************

36. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.75

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ctttgcggattttctccagcagcgccagttct	Protospacer
 * .  ** *** ******************.

37. spacer 3.16|1875638|33|NZ_CP027394|PILER-CR matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.758

atcttcttgttcaggaacgtcagtagaggtgtc	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgtc	Protospacer
**   . .***********.****.********

38. spacer 3.16|1875638|33|NZ_CP027394|PILER-CR matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.758

atcttcttgttcaggaacgtcagtagaggtgtc	CRISPR spacer
atgaatacgttcaggaacgccagtggaggtgtc	Protospacer
**   . .***********.****.********

39. spacer 3.21|1875943|33|NZ_CP027394|PILER-CR matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 8, identity: 0.758

attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
agttatagattattttgatgagtatgaacaaag	Protospacer
* * * .**************** **** **

40. spacer 3.26|1876248|33|NZ_CP027394|PILER-CR matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.758

ataccgggttttgctccagcagcgccagttcct	CRISPR spacer
ctttgcggattttctccagcagcgccagttctt	Protospacer
 * .  ** *** ******************.*

41. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
cgcaaaggattattttgatgaatatgataggg	Protospacer
  .******************.* *** *..

42. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KC821606 (Cellulophaga phage phi12:2, complete genome) position: , mismatch: 9, identity: 0.719

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtaggttattattttgatgagtttaaaaaac	Protospacer
. **..  ***************.*.*****.

43. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 9, identity: 0.719

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ttccgactgttcttttgataagtctgaaaaat	Protospacer
 *. .*  .** *******.************

44. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ggtccgggttctgttccagcagcgccttggcc	Protospacer
.  *******.**.************    **

45. spacer 3.21|1875943|33|NZ_CP027394|PILER-CR matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 9, identity: 0.727

-----attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaacg	Protospacer
     **     ************** * *******.

46. spacer 3.21|1875943|33|NZ_CP027394|PILER-CR matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 9, identity: 0.727

-----attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
tggtcat-----gattattttgatgattatgaaaaacg	Protospacer
     **     ************** * *******.

47. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KC821631 (Cellulophaga phage phi48:1, complete genome) position: , mismatch: 10, identity: 0.688

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

48. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KC821628 (Cellulophaga phage phi18:4, complete genome) position: , mismatch: 10, identity: 0.688

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

49. spacer 3.8|1875943|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_021805 (Cellulophaga phage phi12a:1, complete genome) position: , mismatch: 10, identity: 0.688

attaaaggattattttgatgagtctgaaaaat	CRISPR spacer
ggtgggttattattttgatgagtttaaaaaac	Protospacer
. *...  ***************.*.*****.

50. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

51. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
ccgcggggttctgctccagcaccgccagcagg	Protospacer
 ..* *****.********** ******.

52. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

53. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

54. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

55. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

56. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

57. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

58. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

59. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

60. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

61. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

62. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

63. spacer 3.13|1876248|32|NZ_CP027394|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ataccgggttttgctccagcagcgccagttcc	CRISPR spacer
gccgctcgttgtcctccagcagcgccagttga	Protospacer
..  *  *** * *****************

64. spacer 3.21|1875943|33|NZ_CP027394|PILER-CR matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

attaaaggattattttgatgagtctgaaaaatc	CRISPR spacer
cgcaaaggattattttgatgaatatgataggga	Protospacer
  .******************.* *** *..

65. spacer 3.4|1875699|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 11, identity: 0.656

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

66. spacer 3.4|1875699|32|NZ_CP027394|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 11, identity: 0.656

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

67. spacer 3.4|1875699|32|NZ_CP027394|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 11, identity: 0.656

agcattaacccccaccagctcgacgtgtgtgg	CRISPR spacer
tacattcacccccaccagcccgacgccccgtt	Protospacer
 .**** ************.*****. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

96701 : 158168

Enterobacteria_phage(44.0%)

head,integrase,tail,terminase,protease,capsid,portal,holin

attL 92517:92531|attR 113456:113470

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
92517:92531	attL	NA	NA	NA	NA
WP_000113686.1\|96701_97832_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	4.4e-103	51.4
WP_000113189.1\|97809_98058_-	excisionase	NA	NA	NA	NA
WP_000048530.1\|98122_100594_-	exonuclease	K7PLW7	Enterobacteria_phage	1.8e-56	59.2
WP_001090200.1\|100686_100878_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|100874_101063_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_012601410.1\|101557_101824_+	hypothetical protein	NA	NA	NA	NA
WP_000394541.1\|101812_102151_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-06	51.0
WP_000379548.1\|102162_102315_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.0e-08	55.3
WP_000233320.1\|102611_103031_-	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
WP_001072337.1\|103110_103365_+	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
WP_000693888.1\|103361_103787_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000095671.1\|103809_104772_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	2.1e-69	51.2
WP_001151211.1\|104812_105238_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.3e-63	94.0
WP_000150294.1\|105412_106078_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000018429.1\|106258_106471_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
WP_001329966.1\|106638_106911_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.5e-12	49.2
WP_001265083.1\|106912_107959_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	5.9e-110	55.0
WP_000904106.1\|107971_108346_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.8e-36	63.6
WP_000762880.1\|108342_109164_+	antitermination protein	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
WP_000917746.1\|109390_109588_+	hypothetical protein	Q9MC00	Enterobacteria_phage	1.4e-28	96.9
WP_000935536.1\|109738_110788_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	8.8e-199	95.7
WP_001438304.1\|111586_111718_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.1e-05	96.4
WP_000871291.1\|111998_112334_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_000874307.1\|112594_114448_+	SASA family carbohydrate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.5
113456:113470	attR	NA	NA	NA	NA
WP_000284510.1\|114598_114814_+\|holin	class II holin family protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000731197.1\|114818_115625_+	YdfR family protein	Q08JA0	Stx2-converting_phage	3.3e-145	94.8
WP_001092853.1\|115667_116201_+	lysozyme	Q6H9V6	Enterobacteria_phage	8.7e-102	97.2
WP_032159578.1\|116755_116842_+	hypothetical protein	NA	NA	NA	NA
WP_001228710.1\|117063_117270_+	hypothetical protein	H6WRZ6	Salmonella_phage	2.9e-29	95.6
WP_001390467.1\|117298_117451_+	hypothetical protein	K7PKL2	Enterobacteria_phage	2.8e-21	98.0
WP_000343118.1\|117529_117817_+	hypothetical protein	A0A1P8DTP0	Salmonella_phage	4.0e-29	58.9
WP_000240372.1\|118270_118675_+	hypothetical protein	NA	NA	NA	NA
WP_000867569.1\|119075_119624_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_001390573.1\|119595_121524_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.6e-262	67.5
WP_000259002.1\|121507_121714_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_001387697.1\|121710_123303_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.1
WP_000522596.1\|125237_126266_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.8e-112	60.4
WP_000201506.1\|126317_126686_+	hypothetical protein	NA	NA	NA	NA
WP_001204198.1\|126678_127032_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	3.0e-42	70.1
WP_000974999.1\|127046_127622_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	9.2e-49	57.3
WP_000683079.1\|127618_128014_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235040.1\|128021_128774_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	6.7e-132	97.6
WP_000479095.1\|128787_129219_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
WP_000533402.1\|129245_129659_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000082359.1\|129639_132213_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.9
WP_000847379.1\|132209_132539_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001152522.1\|132538_133237_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
WP_000140761.1\|133241_133985_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	94.7
WP_000090879.1\|133921_134524_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	6.2e-88	85.1
WP_001332187.1\|134597_134936_+	hypothetical protein	NA	NA	NA	NA
WP_000515776.1\|135002_138482_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
WP_001228314.1\|138548_139148_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
WP_000216502.1\|139299_142134_+\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	5.7e-83	59.1
WP_000885576.1\|142133_142718_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-103	95.4
WP_000240999.1\|142772_143441_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000926528.1\|143497_143767_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.7e-19	77.8
WP_000251936.1\|143881_144052_+	hypothetical protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
WP_001079509.1\|144540_145047_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_001056491.1\|145092_145593_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000807651.1\|145678_145858_-	general stress protein	NA	NA	NA	NA
WP_000443069.1\|146238_147045_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209520.1\|147044_148238_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000983912.1\|148249_149611_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.1e-36	40.2
WP_000763511.1\|149611_151207_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001194599.1\|151206_152769_-	anthranilate synthase component I	NA	NA	NA	NA
WP_001386774.1\|152860_152905_-	trp operon leader peptide	NA	NA	NA	NA
WP_001285661.1\|153042_153924_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001295575.1\|153920_154541_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001291216.1\|154641_155514_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001278904.1\|155553_156144_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_000559283.1\|156140_156899_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.8e-07	23.4
WP_000422045.1\|157118_158168_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_2

446016 : 512988

Shigella_phage(43.48%)

integrase,tail,lysis,terminase,capsid,holin,portal

attL 488479:488496|attR 516529:516546

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000041536.1\|446016_448443_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.3e-213	49.1
WP_001342404.1\|448503_450927_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	9.8e-209	48.6
WP_000184488.1\|451458_452094_+	phage antirepressor Ant	A0A088CBR4	Shigella_phage	2.8e-91	81.0
WP_000763355.1\|452141_452363_+	TraR/DksA family transcriptional regulator	V5USD3	Shigella_phage	2.9e-35	98.6
WP_000020909.1\|452359_452644_+	DUF4752 family protein	A0A088CD82	Shigella_phage	6.1e-46	98.9
WP_001290012.1\|452630_453467_+	ead/Ea22-like family protein	A0A2I6TD51	Escherichia_phage	6.1e-126	87.7
WP_000628768.1\|453980_454484_+	DUF551 domain-containing protein	V5UT79	Shigella_phage	2.6e-95	98.2
WP_000481378.1\|454485_454761_-	hypothetical protein	A0A088CD78	Shigella_phage	4.0e-18	89.3
WP_000331660.1\|454884_463236_-	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	95.8
WP_000012439.1\|463304_464570_-	hypothetical protein	A0A2L1IV65	Escherichia_phage	1.5e-192	95.0
WP_000540395.1\|464580_464832_-	hypothetical protein	A0A0P0ZDW9	Stx2-converting_phage	7.9e-13	97.5
WP_000455643.1\|464841_465288_-	hypothetical protein	A0A2L1IV89	Escherichia_phage	4.0e-76	100.0
WP_000509022.1\|465290_465947_-	hypothetical protein	A0A0H4IPM7	Shigella_phage	7.4e-103	99.1
WP_001387532.1\|466038_466440_-	hypothetical protein	Q08J75	Stx2-converting_phage	5.0e-70	98.5
WP_000078908.1\|466496_466637_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	2.0e-18	97.8
WP_000836186.1\|466871_467609_-	Ail/Lom family outer membrane beta-barrel protein	A0A2L1IV31	Escherichia_phage	1.2e-109	80.8
WP_001390575.1\|467688_468306_-	hypothetical protein	A0A2L1IV83	Escherichia_phage	6.3e-120	98.0
WP_000455633.1\|468311_468590_-	outer membrane protein	A0A2L1IV69	Escherichia_phage	2.6e-49	100.0
WP_000038927.1\|468604_469873_-	host specificity protein J	A0A0N7C124	Escherichia_phage	1.6e-218	94.3
WP_001146337.1\|469869_471495_-	hypothetical protein	A0A1I9LJT3	Stx_converting_phage	0.0e+00	96.7
WP_000276176.1\|471835_472063_-	hypothetical protein	A0A088CBQ7	Shigella_phage	2.6e-39	98.7
WP_000537686.1\|472075_472621_-	hypothetical protein	A0A088CD67	Shigella_phage	2.0e-93	99.4
WP_000117962.1\|472703_474611_-\|tail	tail fiber protein	V5USF3	Shigella_phage	4.2e-82	66.0
WP_000207910.1\|474607_475258_-	hypothetical protein	A0A2L1IV63	Escherichia_phage	1.5e-119	99.1
WP_000829400.1\|475257_475821_-	hypothetical protein	A0A2L1IV64	Escherichia_phage	8.3e-103	99.5
WP_001290749.1\|475804_476266_-	hypothetical protein	A0A2L1IV43	Escherichia_phage	6.9e-71	99.3
WP_001140435.1\|476316_476706_-	hypothetical protein	V5UT93	Shigella_phage	1.9e-61	97.7
WP_000214480.1\|476760_477975_-\|capsid	N4-gp56 family major capsid protein	A0A2L1IV46	Escherichia_phage	1.8e-232	99.0
WP_000344999.1\|477997_479005_-	hypothetical protein	A0A2L1IV47	Escherichia_phage	1.2e-168	93.4
WP_000787512.1\|479162_481307_-\|portal	portal protein	A0A088CE71	Shigella_phage	0.0e+00	99.6
WP_001387707.1\|481306_483013_-\|terminase	terminase	A0A2L1IV76	Escherichia_phage	0.0e+00	99.1
WP_001086085.1\|482993_483809_-\|terminase	terminase	A0A2L1IV66	Escherichia_phage	6.6e-125	99.6
WP_000934362.1\|484411_484993_+	lipopolysaccharide core heptose(II)-phosphate phosphatase	A0A2L1IV13	Escherichia_phage	6.7e-47	100.0
WP_001082713.1\|485073_485532_-\|lysis	lysis protein	A0A2L1IV55	Escherichia_phage	6.4e-77	99.3
WP_000675931.1\|485533_485647_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
WP_000087450.1\|485867_486401_-	lysozyme	A0A088CC28	Shigella_phage	5.6e-93	91.5
WP_000284506.1\|486405_486621_-\|holin	class II holin family protein	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001290236.1\|486697_486943_-	DUF826 domain-containing protein	S5MW40	Escherichia_phage	1.1e-14	87.7
WP_000142783.1\|486968_487151_-	DUF1378 family protein	S5MBZ5	Escherichia_phage	1.6e-23	91.7
WP_000874468.1\|487289_489200_-	SASA family carbohydrate esterase	A0A0N7CGH9	Escherichia_phage	6.4e-280	74.8
488479:488496	attL	NA	NA	NA	NA
WP_001204886.1\|489965_490400_-	antitermination protein	G9L695	Escherichia_phage	2.4e-81	98.6
WP_000992060.1\|490392_490587_-	protein ninH	A0A088CC23	Shigella_phage	1.4e-30	100.0
WP_001008115.1\|490586_490949_-	RusA family crossover junction endodeoxyribonuclease	A0A088CBJ1	Shigella_phage	9.2e-63	98.3
WP_000002252.1\|490945_491236_-	DUF1364 domain-containing protein	A0A088CE53	Shigella_phage	9.3e-50	96.9
WP_001254268.1\|491259_491451_-	NinE family protein	A0A0P0ZDL7	Stx2-converting_phage	8.9e-25	87.7
WP_001076834.1\|491447_491858_-	recombination protein NinB	A0A088CBP6	Shigella_phage	3.9e-70	98.5
WP_000211990.1\|491912_492584_-	ORF6N domain-containing protein	A0A088CD42	Shigella_phage	9.0e-96	82.6
WP_000042397.1\|493290_493608_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000818160.1\|493658_494144_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_000119356.1\|494162_494342_-	hypothetical protein	NA	NA	NA	NA
WP_000887482.1\|494551_494764_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.4e-16	62.9
WP_001278450.1\|494952_495057_-	hypothetical protein	NA	NA	NA	NA
WP_000206792.1\|495172_495757_-	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	5.5e-33	83.5
WP_001118163.1\|495813_496209_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.0e-31	52.9
WP_000450864.1\|496224_496995_-	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	8.1e-109	82.4
WP_000790392.1\|497020_497761_-	ATP-binding protein	A0A088CBP4	Shigella_phage	2.3e-121	87.4
WP_001390256.1\|497767_498850_-	hypothetical protein	V5URT9	Shigella_phage	2.8e-200	96.4
WP_000438870.1\|498870_499089_-	hypothetical protein	A0A088CC17	Shigella_phage	1.1e-21	100.0
WP_000438525.1\|499103_499400_-	hypothetical protein	A0A088CBI6	Shigella_phage	3.4e-47	98.0
WP_000437871.1\|499538_499739_-	Cro/Cl family transcriptional regulator	A4KWT7	Enterobacteria_phage	1.3e-29	97.0
WP_001274758.1\|499839_500553_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	4.1e-131	99.6
WP_001074607.1\|500599_501142_+	hypothetical protein	NA	NA	NA	NA
WP_000528776.1\|501129_501906_+	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_000198438.1\|502400_502784_+	antitermination protein	G9L671	Escherichia_phage	6.7e-64	99.2
WP_000211196.1\|502787_503501_+	hypothetical protein	A0A088CC14	Shigella_phage	1.8e-126	98.7
WP_001005963.1\|503532_503892_+	hypothetical protein	A0A088CBI5	Shigella_phage	2.3e-37	72.6
WP_000189936.1\|503860_504070_-	hypothetical protein	NA	NA	NA	NA
WP_000560214.1\|504526_504748_+	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	1.1e-34	94.4
WP_000660961.1\|504831_505218_+	hypothetical protein	V5USC5	Shigella_phage	9.5e-50	78.9
WP_001271588.1\|505325_507398_+	exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	0.0e+00	87.4
WP_000995032.1\|507394_507691_+	host-nuclease inhibitor protein Gam	V5URU8	Shigella_phage	5.8e-47	93.9
WP_000100829.1\|507696_508482_+	phage recombination protein Bet	A0A088CBI3	Shigella_phage	9.4e-145	97.3
WP_000186868.1\|508478_509159_+	YqaJ viral recombinase family protein	A0A0P0ZBV6	Stx2-converting_phage	1.5e-130	98.2
WP_000497813.1\|509206_509458_+	DUF4222 domain-containing protein	A0A088CBN9	Shigella_phage	1.3e-39	100.0
WP_001387389.1\|509719_510883_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.8e-227	99.7
WP_000526492.1\|511476_512331_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000148710.1\|512373_512988_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
516529:516546	attR	NA	NA	NA	NA

DBSCAN-SWA_3

640393 : 698973

Enterobacteria_phage(77.55%)

head,integrase,tail,terminase,transposase,tRNA,capsid,holin,portal,plate

attL 636386:636402|attR 688593:688609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
636386:636402	attL	NA	NA	NA	NA
WP_000029466.1\|640393_641143_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	28.2
WP_001154183.1\|641142_641694_-	bifunctional thioredoxin/glutathione peroxidase	NA	NA	NA	NA
WP_000956518.1\|641756_642737_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_000416308.1\|642926_643322_-	hypothetical protein	NA	NA	NA	NA
WP_001247218.1\|643332_644268_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	4.8e-79	50.5
WP_000094527.1\|644356_644668_-	helix-turn-helix transcriptional regulator	Q1JS45	Enterobacteria_phage	8.8e-22	55.9
WP_000163908.1\|644759_645038_+	DNA-binding protein	NA	NA	NA	NA
WP_000917807.1\|645052_645391_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	2.2e-50	85.3
WP_000159452.1\|645401_645689_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	2.7e-33	77.9
WP_000514277.1\|645700_645943_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000021658.1\|645939_646053_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.4e-09	91.9
WP_001038613.1\|646141_646462_+	hypothetical protein	NA	NA	NA	NA
WP_000985715.1\|646451_646655_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	3.4e-30	94.0
WP_000153687.1\|646651_646897_+	winged helix-turn-helix domain-containing protein	A0A0A7NV47	Enterobacteria_phage	8.4e-36	87.7
WP_000104300.1\|646893_647193_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	6.2e-41	88.9
WP_157847544.1\|647204_647822_+	ash family protein	S5MQL6	Escherichia_phage	1.5e-09	49.4
WP_000564228.1\|647818_648208_+	hypothetical protein	NA	NA	NA	NA
WP_001272076.1\|648204_651045_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	89.4
WP_000686540.1\|651121_652081_+	plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	1.3e-180	99.4
WP_000211292.1\|652085_652400_+	plasmid partitioning/stability family protein	A0A0A7NPT5	Enterobacteria_phage	3.5e-18	51.9
WP_000201251.1\|652419_652851_+	hypothetical protein	A0A0A7NRY2	Enterobacteria_phage	4.7e-21	43.3
WP_000224219.1\|652852_653116_+	hypothetical protein	A0A2P0P958	Salmonella_phage	1.1e-30	72.4
WP_000087812.1\|653627_654674_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
WP_000613796.1\|654673_656425_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.6
WP_001262665.1\|656579_657416_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.8e-149	99.3
WP_001055094.1\|657439_658492_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	3.2e-188	94.3
WP_000632318.1\|658537_659338_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.6e-130	91.4
WP_000063103.1\|659439_659934_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
WP_000864897.1\|659933_660134_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	6.0e-32	98.5
WP_000104350.1\|660136_660460_+\|holin	phage holin family protein	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000072317.1\|660456_660849_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	6.4e-70	97.7
WP_000780558.1\|660845_661253_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.2e-63	95.6
WP_000202135.1\|661391_663272_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	3.8e-301	81.0
WP_000921128.1\|663295_663763_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.1e-83	96.1
WP_000356370.1\|663755_664391_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	5.3e-114	99.5
WP_001342219.1\|664402_664969_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.5e-99	97.3
WP_001067548.1\|664986_665316_+	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	2.2e-55	100.0
WP_001111965.1\|665319_666216_+\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	5.7e-154	97.3
WP_000071739.1\|666208_666739_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
WP_000108557.1\|666741_668874_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.2e-130	66.4
WP_000144016.1\|668873_669452_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.7e-96	89.0
WP_000954195.1\|669495_670068_-	serine acetyltransferase	NA	NA	NA	NA
WP_000979946.1\|670224_670713_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	8.8e-85	99.4
WP_001390260.1\|670725_673533_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.5
WP_000333498.1\|673519_673675_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.3e-22	98.0
WP_000665305.1\|673683_674049_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.4e-55	96.7
WP_000290443.1\|674103_674616_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.7e-92	98.8
WP_000005414.1\|674615_675800_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	3.8e-222	98.0
WP_000132828.1\|675957_677067_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	3.7e-195	94.8
WP_000965749.1\|677158_678241_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_000019440.1\|678585_679566_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
WP_000488099.1\|679759_680020_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078916.1\|680210_680351_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
WP_001229265.1\|680652_680952_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_000672359.1\|680956_683344_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000018588.1\|683358_684342_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5
WP_001386830.1\|684624_684669_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_000124850.1\|684791_685148_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_001124225.1\|685200_685398_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_001700733.1\|685494_686037_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
WP_001144190.1\|686040_687969_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.5e-130	37.3
WP_001142445.1\|690566_690674_+	hypothetical protein	NA	NA	NA	NA
688593:688609	attR	NA	NA	NA	NA
WP_000771396.1\|690726_691485_-	YdiY family protein	NA	NA	NA	NA
WP_000251735.1\|691771_692701_+	6-phosphofructokinase II	NA	NA	NA	NA
WP_000146159.1\|692801_693092_+	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_000267645.1\|693197_694058_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_000222172.1\|694098_694635_-	YniB family protein	NA	NA	NA	NA
WP_000106834.1\|694781_695450_+	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_001295408.1\|695612_696203_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_001010722.1\|696335_697727_+	cystine/sulfocysteine:cation symporter	NA	NA	NA	NA
WP_000019440.1\|697992_698973_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1

DBSCAN-SWA_4

800072 : 891088

107

Enterobacteria_phage(35.29%)

head,tail,protease,tRNA,terminase,capsid,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000984517.1\|800072_800954_-\|protease	protease HtpX	NA	NA	NA	NA
WP_001315679.1\|801145_803194_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
WP_000431370.1\|803213_803912_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_001043882.1\|804008_804506_-	L-methionine (R)-S-oxide reductase	NA	NA	NA	NA
WP_001207283.1\|804635_805919_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001297532.1\|805887_808521_+	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_000057022.1\|808600_810040_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_001295499.1\|810157_810394_+	DUF1480 family protein	NA	NA	NA	NA
WP_001296140.1\|810498_810690_+	YebW family protein	NA	NA	NA	NA
WP_000812712.1\|810690_811347_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.6e-57	50.7
WP_000976472.1\|811742_812084_-	YebY family protein	NA	NA	NA	NA
WP_000879280.1\|812096_812969_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000204699.1\|812972_813347_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000916763.1\|813485_813716_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
WP_000011658.1\|813817_814474_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_000944256.1\|814497_815160_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
WP_000936951.1\|815156_817217_-	oligopeptidase B	NA	NA	NA	NA
WP_000024745.1\|817425_818085_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_001295500.1\|818411_818768_-	protein YebF	NA	NA	NA	NA
WP_000257738.1\|818834_819125_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_000173474.1\|819258_820437_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000800512.1\|820492_821134_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_001069467.1\|821170_822982_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000301720.1\|823216_824692_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
WP_001056706.1\|825029_825899_+	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
WP_000091176.1\|826026_827469_+	pyruvate kinase	NA	NA	NA	NA
WP_000448381.1\|827599_828571_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_001184045.1\|828690_830013_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_001342995.1\|830028_830961_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_000202996.1\|831039_831795_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
WP_000571465.1\|831791_832577_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_000568519.1\|832723_833734_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|833742_834354_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_001386853.1\|834492_834558_-	stress response small protein YobI	NA	NA	NA	NA
WP_001024930.1\|834628_835231_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|835232_835754_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|835788_836529_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077221229.1\|836557_837010_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258662.1\|837002_838775_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891610.1\|839084_839651_+	hydrolase	NA	NA	NA	NA
WP_001217553.1\|840005_840254_+	DinI-like family protein	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
WP_071827722.1\|840389_840650_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_000227779.1\|840792_841401_-	DUF4376 domain-containing protein	Q9LA61	Enterobacterial_phage	2.2e-37	44.7
WP_001387718.1\|841409_842948_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A2D1UII2	Escherichia_phage	8.8e-54	92.2
WP_001228314.1\|843099_843699_-	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
WP_000515718.1\|843766_847162_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	88.6
WP_000090891.1\|847222_847855_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_000140762.1\|847791_848535_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.1e-146	94.7
WP_001152522.1\|848539_849238_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
WP_000847391.1\|849237_849567_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	8.7e-52	90.8
WP_000081812.1\|849563_852176_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	87.1
WP_000533444.1\|852156_852570_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	2.1e-42	82.2
WP_000479035.1\|852596_853019_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	1.1e-70	97.1
WP_000235108.1\|853032_853785_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.5e-133	98.0
WP_000683079.1\|853792_854188_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000975010.1\|854184_854760_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	6.4e-50	57.8
WP_001204556.1\|854774_855128_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000201501.1\|855120_855504_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522601.1\|855555_856584_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.1e-113	62.2
WP_000256823.1\|856641_856989_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
WP_001253973.1\|857025_858531_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.3e-99	53.1
WP_000831738.1\|858520_860113_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.5
WP_000259002.1\|860109_860316_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_001390579.1\|860299_862228_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	7.4e-260	66.6
WP_000867568.1\|862199_862748_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_001329960.1\|863142_863328_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
WP_000347013.1\|863460_863601_-	hypothetical protein	NA	NA	NA	NA
WP_071587457.1\|864013_864199_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	9.9e-21	80.3
WP_001280932.1\|864421_864553_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_001151822.1\|864567_864750_-	hypothetical protein	NA	NA	NA	NA
WP_001092910.1\|864906_865440_-	lysozyme	Q08J98	Stx2-converting_phage	1.1e-101	96.6
WP_000551290.1\|865568_865883_+	hypothetical protein	Q08J99	Stx2-converting_phage	4.7e-55	100.0
WP_000731196.1\|865892_866699_-	YdfR family protein	Q08JA0	Stx2-converting_phage	4.8e-152	99.6
WP_000874354.1\|867067_868921_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	90.6
WP_000935520.1\|869712_870762_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	3.1e-188	91.4
WP_000917724.1\|870913_871117_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000868396.1\|871381_872308_+	hypothetical protein	NA	NA	NA	NA
WP_001131905.1\|872294_872843_+	hypothetical protein	NA	NA	NA	NA
WP_001205460.1\|872855_873197_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
WP_001390267.1\|873214_874204_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.4e-193	99.4
WP_001072672.1\|874211_875027_-	KilA-N domain-containing protein	U5P4K5	Shigella_phage	2.2e-149	99.6
WP_000767110.1\|875189_875585_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	5.7e-66	98.4
WP_000210143.1\|875581_875908_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	2.7e-53	98.1
WP_000066917.1\|875904_876558_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_001387484.1\|876557_877052_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	1.5e-84	96.3
WP_000061508.1\|877048_877867_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	2.8e-123	88.1
WP_000620687.1\|877863_878088_-	hypothetical protein	A5LH70	Enterobacteria_phage	2.4e-37	95.9
WP_001087340.1\|878084_879230_-	Rha family transcriptional regulator	A5LH69	Enterobacteria_phage	3.1e-173	83.5
WP_000526669.1\|879226_879784_-	hypothetical protein	Q8SBF4	Shigella_phage	5.3e-94	94.1
WP_001191669.1\|879776_880037_-	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_001387485.1\|880134_880827_+	helix-turn-helix domain-containing protein	S5FUZ3	Shigella_phage	6.4e-121	96.1
WP_000179185.1\|881529_881892_+	hypothetical protein	Q8SBF8	Shigella_phage	7.5e-57	94.2
WP_000081306.1\|881957_882782_+	DUF2303 family protein	K7PJQ6	Enterobacteria_phage	1.1e-148	98.9
WP_000008178.1\|882909_883446_+	5'-deoxynucleotidase	A0A0P0ZCH9	Stx2-converting_phage	2.2e-100	99.4
WP_001242713.1\|883436_883799_+	phage protein	K7PH61	Enterobacteria_phage	6.8e-66	97.5
WP_000111289.1\|883795_883999_+	hypothetical protein	K7PLX1	Enterobacteria_phage	1.0e-31	98.5
WP_000476208.1\|883991_884231_+	hypothetical protein	S5MQM0	Escherichia_phage	1.6e-34	94.9
WP_000065512.1\|884227_884776_+	ead/Ea22-like family protein	A0A1I9LJM5	Stx_converting_phage	1.4e-59	97.5
WP_000628772.1\|885289_886048_+	phage protein	A0A1U9AJ59	Stx1_converting_phage	2.7e-109	82.0
WP_000457723.1\|886132_886375_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_001030156.1\|886378_886525_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
WP_000528718.1\|886533_886770_+	excisionase family protein	Q8W657	Enterobacteria_phage	6.4e-41	100.0
WP_000362003.1\|886825_888136_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	3.0e-244	95.4
WP_044713004.1\|888117_888888_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
WP_000252979.1\|888940_889336_+	MAPEG family protein	NA	NA	NA	NA
WP_000019588.1\|889376_890120_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000564745.1\|890116_891088_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA

DBSCAN-SWA_5

1189050 : 1198492

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292767.1\|1189050_1190187_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.6e-161	97.1
WP_001351453.1\|1190183_1192184_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
WP_001295429.1\|1192308_1192770_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001295430.1\|1192810_1193281_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|1193327_1194047_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|1194043_1195729_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|1195950_1196682_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|1196741_1196849_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|1196829_1197561_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569326.1\|1197565_1198492_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_6

1399220 : 1464252

Enterobacteria_phage(45.95%)

head,integrase,transposase,tRNA,terminase,protease,portal

attL 1429025:1429041|attR 1466705:1466721

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283590.1\|1399220_1400033_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289162.1\|1400032_1401046_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699126.1\|1401111_1402248_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	2.6e-23	29.1
WP_000615821.1\|1402346_1403342_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127781.1\|1403338_1404517_-	MFS transporter	NA	NA	NA	NA
WP_000817178.1\|1404800_1406021_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683791.1\|1406179_1408186_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559764.1\|1408306_1408585_-	YfcL family protein	NA	NA	NA	NA
WP_001089235.1\|1408618_1409167_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447361.1\|1409166_1409976_-	TSUP family transporter	NA	NA	NA	NA
WP_001043820.1\|1409975_1410800_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918470.1\|1410803_1411889_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
WP_001295704.1\|1411923_1412856_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730807.1\|1413021_1413573_+	endonuclease SmrB	NA	NA	NA	NA
WP_000399648.1\|1413766_1414747_-\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_001387754.1\|1414973_1415846_-	DUF2544 domain-containing protein	NA	NA	NA	NA
WP_000730291.1\|1415832_1416357_-	fimbrial protein	NA	NA	NA	NA
WP_000822649.1\|1416353_1416824_-	fimbrial protein	NA	NA	NA	NA
WP_000842082.1\|1416820_1417369_-	fimbrial protein	NA	NA	NA	NA
WP_001281615.1\|1417343_1418096_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001112829.1\|1418115_1420758_-	fimbrial usher protein YfcU	NA	NA	NA	NA
WP_000033328.1\|1420839_1421403_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|1422077_1422563_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000426166.1\|1422765_1424910_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531990.1\|1424909_1426220_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030901.1\|1426399_1426684_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001296861.1\|1427055_1428396_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000937848.1\|1428761_1429820_+	hypothetical protein	NA	NA	NA	NA
1429025:1429041	attL	NA	NA	NA	NA
WP_000776768.1\|1430001_1430757_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000368131.1\|1431050_1431983_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
WP_000958672.1\|1432294_1433452_+\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	5.3e-221	100.0
WP_000178979.1\|1433680_1435591_+	acyltransferase	C6ZR20	Salmonella_phage	4.7e-57	32.6
WP_000129924.1\|1435661_1437641_-\|head	phage head-binding domain-containing protein	A5VW57	Enterobacteria_phage	6.2e-60	93.5
WP_000835342.1\|1437741_1438620_-	phage repressor protein/antirepressor Ant	I6R977	Salmonella_phage	5.8e-95	78.1
WP_000865490.1\|1438852_1438993_-	Arc family DNA-binding protein	A0A0M4S6R9	Salmonella_phage	7.5e-05	56.8
WP_001283829.1\|1439098_1439350_+	Arc family DNA-binding protein	A5VW59	Enterobacteria_phage	1.5e-35	93.9
WP_000820795.1\|1439346_1439661_+	hypothetical protein	NA	NA	NA	NA
WP_000749286.1\|1439686_1440172_+	lipoprotein	NA	NA	NA	NA
WP_001387755.1\|1440186_1442031_-	DNA transfer protein	A0A192Y934	Salmonella_phage	4.0e-247	73.8
WP_000246924.1\|1442030_1443497_-	phage DNA ejection protein	B6SCW4	Bacteriophage	8.4e-139	62.0
WP_000964882.1\|1443506_1444199_-	DNA transfer protein	G5DA80	Enterobacteria_phage	9.2e-112	100.0
WP_000614045.1\|1444201_1444657_-	DUF2824 family protein	Q716G5	Shigella_phage	5.7e-86	98.7
WP_000785547.1\|1444656_1445505_-	Packaged DNA stabilization protein gp26	Q716G6	Shigella_phage	3.4e-100	97.5
WP_001122379.1\|1445504_1446923_-	packaged DNA stabilization protein gp10	Q9AYZ4	Salmonella_phage	3.9e-274	98.9
WP_000246749.1\|1446931_1447414_-	packaged DNA stabilization protein p27	Q716G8	Shigella_phage	8.4e-88	99.4
WP_000375637.1\|1447388_1447574_-	hypothetical protein	Q716G9	Shigella_phage	2.7e-26	100.0
WP_001133485.1\|1447616_1448888_-\|head	head protein	Q9AYZ7	Salmonella_phage	1.2e-239	99.5
WP_000426730.1\|1448899_1449784_-	hypothetical protein	Q716H1	Shigella_phage	2.0e-143	99.0
WP_000852341.1\|1449797_1451924_-\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.0
WP_000200769.1\|1451926_1453339_-\|terminase	PBSX family phage terminase large subunit	Q716H3	Shigella_phage	9.8e-278	99.8
WP_000113732.1\|1453335_1453776_-	hypothetical protein	C7U0V7	Enterobacteria_phage	1.7e-79	99.3
WP_000807788.1\|1453778_1454021_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
WP_000638547.1\|1455067_1455199_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A5VWA4	Enterobacteria_phage	1.4e-16	100.0
WP_001243355.1\|1455183_1455336_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_000050554.1\|1455411_1455582_+	hypothetical protein	K7PJW0	Enterobacteria_phage	3.0e-24	100.0
WP_000031367.1\|1455592_1456198_+	ERF family protein	K7P6W7	Enterobacteria_phage	4.1e-108	100.0
WP_000951329.1\|1456197_1456581_+	hypothetical protein	K7P7R8	Enterobacteria_phage	1.2e-65	97.6
WP_001111299.1\|1456604_1456901_+	DUF2856 family protein	A5VWB0	Enterobacteria_phage	3.9e-51	99.0
WP_032159494.1\|1456920_1457202_+	hypothetical protein	K7P7M4	Enterobacteria_phage	9.7e-44	98.9
WP_001214454.1\|1457198_1457366_+	DUF2737 family protein	Q716F2	Shigella_phage	8.6e-24	98.2
WP_000034245.1\|1457362_1458034_+	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	3.0e-83	73.2
WP_000951713.1\|1458396_1458606_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
WP_000208008.1\|1458602_1459232_+	DUF550 domain-containing protein	K7P7E3	Enterobacteria_phage	1.1e-55	58.6
WP_001277767.1\|1459328_1459508_+	Eag protein	K7PL40	Enterobacteria_phage	2.5e-29	100.0
WP_001163428.1\|1459639_1459840_+	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
WP_001197025.1\|1460369_1461617_-	oligosaccharide MFS transporter	NA	NA	NA	NA
WP_001274887.1\|1461688_1462603_-	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_000194515.1\|1462818_1464252_+	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	7.0e-29	25.4
1466705:1466721	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2063815 : 2121909

Staphylococcus_phage(20.0%)

tRNA,integrase,transposase,protease

attL 2064800:2064817|attR 2109738:2109755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000701841.1\|2063815_2064574_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105559.1\|2064779_2065700_-	agmatinase	NA	NA	NA	NA
2064800:2064817	attL	NA	NA	NA	NA
WP_000758915.1\|2065835_2066567_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|2066712_2068689_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|2068697_2068829_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001303650.1\|2068964_2069180_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|2069483_2070638_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|2071073_2072468_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|2072544_2073042_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|2073136_2073844_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222508.1\|2073923_2074655_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593273.1\|2074667_2075618_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|2075726_2076290_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|2076289_2076706_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001349546.1\|2076881_2077862_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|2077879_2078584_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|2078601_2079168_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|2079164_2079455_+	YggU family protein	NA	NA	NA	NA
WP_001174743.1\|2079462_2080056_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239939.1\|2080048_2081185_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745217.1\|2081339_2082347_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394125.1\|2082463_2083510_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|2083685_2084405_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107564.1\|2084588_2084915_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|2084914_2085634_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001297399.1\|2085794_2086847_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|2086874_2087150_+	oxidative damage protection protein	NA	NA	NA	NA
WP_001298916.1\|2087214_2088294_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001049791.1\|2088495_2089752_+	nucleoside permease NupG	NA	NA	NA	NA
WP_000839766.1\|2089801_2091937_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234526.1\|2092334_2093042_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218809.1\|2093420_2094683_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	6.9e-81	43.1
WP_001387038.1\|2095933_2096197_+	hypothetical protein	NA	NA	NA	NA
WP_000286652.1\|2097666_2100516_+	DEAD/DEAH box helicase	A0A2H4J643	uncultured_Caudovirales_phage	2.2e-183	39.6
WP_001273465.1\|2100541_2101522_+	ATP-binding protein	A0A1B2RW50	Lymphocystis_disease_virus	4.2e-17	30.2
WP_000126413.1\|2101531_2103919_+	S8 family peptidase	NA	NA	NA	NA
WP_000105162.1\|2103928_2105557_+	site-specific DNA-methyltransferase	A0A0K1LNZ9	Escherichia_phage	4.6e-85	42.6
WP_000081335.1\|2105559_2108430_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_001091149.1\|2108518_2108812_+	hypothetical protein	NA	NA	NA	NA
WP_001254936.1\|2109151_2110303_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	3.4e-42	35.6
2109738:2109755	attR	NA	NA	NA	NA
WP_001189118.1\|2111465_2112974_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
WP_001309734.1\|2118789_2119224_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
WP_000080172.1\|2119600_2121214_+\|transposase	IS66-like element ISEc43 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-172	61.4
WP_077577697.1\|2121546_2121909_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.4e-40	62.5

DBSCAN-SWA_8

2933212 : 2963298

Escherichia_phage(27.27%)

tRNA,integrase,transposase

attL 2947476:2947505|attR 2969350:2969379

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001070193.1\|2933212_2933902_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
WP_000678443.1\|2933907_2935989_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_000468836.1\|2936154_2937360_-	sodium/glutamate symporter	NA	NA	NA	NA
WP_001295238.1\|2937639_2939031_+	xanthine/proton symporter XanP	H9YQ34	environmental_Halophage	1.4e-71	100.0
WP_001307467.1\|2939151_2940861_+	AsmA family protein	NA	NA	NA	NA
WP_000702903.1\|2940913_2943232_-	alpha-xylosidase	NA	NA	NA	NA
WP_000834439.1\|2943241_2944624_-	glycoside-pentoside-hexuronide family transporter	NA	NA	NA	NA
WP_001218908.1\|2945310_2946495_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-162	69.9
WP_000656307.1\|2947344_2947434_-	acetyltransferase	NA	NA	NA	NA
2947476:2947505	attL	NA	NA	NA	NA
WP_001138064.1\|2947500_2950467_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|2950469_2951030_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|2951155_2951506_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|2951708_2952722_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000703418.1\|2952879_2953353_+	trimethoprim-resistant dihydrofolate reductase DfrA7	A0A1B2IBQ4	Erwinia_phage	8.4e-16	32.0
WP_000679427.1\|2953582_2953930_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259029.1\|2953923_2954703_+	dihydropteroate synthase	NA	NA	NA	NA
WP_001067855.1\|2954736_2955441_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|2955940_2956801_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|2957398_2958103_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|2958858_2959710_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|2960017_2960833_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_001082319.1\|2960893_2961697_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|2961696_2962533_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001067855.1\|2962593_2963298_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
2969350:2969379	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3542005 : 3618605

Enterobacteria_phage(21.43%)

tRNA,integrase,protease,transposase

attL 3550074:3550089|attR 3590803:3590818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001390760.1\|3542005_3543130_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	3.3e-199	99.7
WP_162886171.1\|3543707_3544920_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.3
WP_000555385.1\|3544960_3546103_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001387604.1\|3546842_3547769_+	hypothetical protein	NA	NA	NA	NA
WP_000074478.1\|3547718_3548912_-	MFS transporter	NA	NA	NA	NA
WP_001387605.1\|3549047_3550772_+	aerobactin synthase IucA	NA	NA	NA	NA
3550074:3550089	attL	NA	NA	NA	NA
WP_001287497.1\|3550772_3551720_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015710.1\|3551719_3553462_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750143.1\|3553458_3554796_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001387241.1\|3554801_3556997_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001189118.1\|3557961_3559470_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
WP_000422750.1\|3561155_3561581_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-48	97.9
WP_000291751.1\|3565478_3566060_-	hypothetical protein	NA	NA	NA	NA
WP_001034110.1\|3566106_3569964_-\|protease	serine protease autotransporter toxin SigA	Q9LA58	Enterobacterial_phage	2.4e-225	38.3
WP_001218804.1\|3576403_3577666_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	9.3e-78	38.3
WP_001387262.1\|3578045_3578621_-	transcriptional regulator	NA	NA	NA	NA
WP_000068978.1\|3578657_3580355_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_000883400.1\|3580330_3580669_-	divalent cation tolerance protein CutA	NA	NA	NA	NA
WP_000961957.1\|3580784_3582086_-	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
WP_000069437.1\|3582203_3583640_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_001267448.1\|3583976_3584453_+	membrane protein FxsA	NA	NA	NA	NA
WP_000015837.1\|3584468_3585725_-	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
WP_001026276.1\|3586000_3586294_+	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
WP_000729117.1\|3586337_3587984_+	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
WP_000558209.1\|3588121_3588475_+	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_001008073.1\|3588677_3589547_-	YjeJ family protein	NA	NA	NA	NA
WP_000940530.1\|3589936_3590965_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
3590803:3590818	attR	NA	NA	NA	NA
WP_000257278.1\|3591006_3591573_+	elongation factor P	NA	NA	NA	NA
WP_000977757.1\|3591624_3591750_+	lipoprotein antitoxin entericidin A	NA	NA	NA	NA
WP_000239596.1\|3591860_3592007_+	lipoprotein toxin entericidin B	NA	NA	NA	NA
WP_000118482.1\|3592181_3592499_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_001238378.1\|3592495_3593029_-	lipocalin Blc	A0A1W6JNX6	Morganella_phage	2.7e-47	55.0
WP_001367937.1\|3593117_3594251_-	BlaEC family class C beta-lactamase	NA	NA	NA	NA
WP_001299198.1\|3594313_3594673_-	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_000208757.1\|3594683_3595079_-	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_000829498.1\|3595089_3595824_-	fumarate reductase iron-sulfur protein	NA	NA	NA	NA
WP_001192973.1\|3595816_3597625_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
WP_000004771.1\|3597949_3598927_+	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
WP_001346081.1\|3599145_3600648_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_000342867.1\|3600699_3601014_+	hypothetical protein	NA	NA	NA	NA
WP_001276180.1\|3601010_3601325_+	YjeO family protein	NA	NA	NA	NA
WP_001236813.1\|3601353_3604677_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_000934933.1\|3604698_3605667_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_000041970.1\|3605763_3606816_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_001295188.1\|3606910_3607456_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
WP_010723271.1\|3608198_3608252_+	hypothetical protein	NA	NA	NA	NA
WP_001294219.1\|3608234_3609374_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_001307537.1\|3609372_3610920_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_000981977.1\|3610891_3611353_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
WP_000990321.1\|3611371_3612709_+	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
WP_001122523.1\|3612718_3614566_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.6e-60	41.6
WP_001280345.1\|3614558_3615509_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001051883.1\|3615594_3615903_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000460360.1\|3615979_3617260_+	GTPase HflX	NA	NA	NA	NA
WP_000312490.1\|3617345_3618605_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5

DBSCAN-SWA_10

3687160 : 3749094

Enterobacteria_phage(25.0%)

tRNA,integrase,holin,transposase

attL 3679282:3679297|attR 3718756:3718771

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3679282:3679297	attL	NA	NA	NA	NA
WP_000399648.1\|3687160_3688141_-\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_000047539.1\|3688417_3688804_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000148581.1\|3688876_3689338_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000013042.1\|3689350_3690286_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	3.8e-52	40.2
WP_001296693.1\|3690289_3690424_-	pyr operon leader peptide	NA	NA	NA	NA
WP_000230281.1\|3690704_3691100_-	RidA family protein	NA	NA	NA	NA
WP_000500725.1\|3691230_3691944_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000256656.1\|3692014_3692608_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000583470.1\|3692752_3693205_+	toxin-antitoxin biofilm protein TabA	NA	NA	NA	NA
WP_001387612.1\|3693327_3694647_+	DNA-binding protein	NA	NA	NA	NA
WP_001387613.1\|3694658_3694889_+	hypothetical protein	NA	NA	NA	NA
WP_000012907.1\|3694989_3695994_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000002953.1\|3696155_3696572_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_001059422.1\|3696617_3697121_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000079641.1\|3697313_3698510_+	DUF898 domain-containing protein	NA	NA	NA	NA
WP_000416381.1\|3698565_3701421_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.0e-140	36.7
WP_000786399.1\|3701420_3701864_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_000397144.1\|3701997_3703509_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
WP_000584114.1\|3703775_3704876_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_001295681.1\|3704875_3705958_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_001294559.1\|3706076_3707579_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	3.0e-83	44.6
WP_001349989.1\|3707656_3708655_-	DNA-binding transcriptional regulator IdnR	NA	NA	NA	NA
WP_001128335.1\|3708721_3710041_-	gnt-II system L-idonate transporter	NA	NA	NA	NA
WP_000998695.1\|3710105_3710870_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_001197416.1\|3710893_3711925_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA
WP_000896735.1\|3712141_3712705_+	gluconokinase	NA	NA	NA	NA
WP_000061766.1\|3712708_3713728_-	NADPH-dependent aldehyde reductase Ahr	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.4e-44	30.4
WP_000142493.1\|3714157_3715084_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_001223819.1\|3715073_3716693_-	TraI domain-containing protein	NA	NA	NA	NA
WP_001143292.1\|3717993_3718287_-	hypothetical protein	NA	NA	NA	NA
WP_000202281.1\|3718654_3719527_-	HNH endonuclease	NA	NA	NA	NA
3718756:3718771	attR	NA	NA	NA	NA
WP_001178761.1\|3719771_3720152_-	hypothetical protein	NA	NA	NA	NA
WP_001099275.1\|3721822_3722119_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001104341.1\|3722748_3723825_+	Fic family protein	NA	NA	NA	NA
WP_000729465.1\|3723875_3724505_-	hypothetical protein	NA	NA	NA	NA
WP_001114712.1\|3725415_3726240_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001351184.1\|3726405_3727962_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000859648.1\|3727961_3728651_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_001215044.1\|3728762_3728927_+	hypothetical protein	NA	NA	NA	NA
WP_000416151.1\|3730896_3731928_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.4e-18	27.0
WP_000916805.1\|3732198_3732642_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000705930.1\|3732657_3732945_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000345347.1\|3732957_3734214_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_001327567.1\|3734460_3734715_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	8.0e-21	62.2
WP_000107474.1\|3735136_3736150_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_000998350.1\|3736161_3737478_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_000350265.1\|3737505_3738426_-	ribokinase	NA	NA	NA	NA
WP_001295538.1\|3738731_3739514_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_000080200.1\|3740697_3742311_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-182	63.6
WP_000624722.1\|3742341_3742692_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000422741.1\|3742688_3743114_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_001422798.1\|3743252_3743381_+	alcohol dehydrogenase	NA	NA	NA	NA
WP_000145474.1\|3743561_3744218_-	TetR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_000625669.1\|3744463_3745741_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_001293435.1\|3745803_3747801_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_000088357.1\|3747954_3749094_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.5e-68	45.1

DBSCAN-SWA_11

4059267 : 4121590

Emiliania_huxleyi_virus(12.5%)

tRNA,transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001346129.1\|4059267_4060620_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|4060649_4063082_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|4063203_4063689_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139279.1\|4063692_4064718_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|4064822_4065278_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|4065281_4066070_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000139667.1\|4066069_4067218_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569430.1\|4067214_4067811_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	40.0
WP_001294757.1\|4067847_4071330_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
WP_000055741.1\|4071342_4072302_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_001020973.1\|4072400_4074542_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|4074598_4074988_+	VOC family protein	NA	NA	NA	NA
WP_000176578.1\|4075052_4076351_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062312.1\|4076399_4076660_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|4076646_4076847_-	YaeP family protein	NA	NA	NA	NA
WP_001185290.1\|4077012_4077558_+	YaeQ family protein	NA	NA	NA	NA
WP_000635545.1\|4077554_4077977_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239154.1\|4077990_4078701_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_000399648.1\|4078950_4079931_+\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_001260716.1\|4081010_4082729_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094011.1\|4082840_4083548_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202329.1\|4083544_4083949_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874224.1\|4084066_4084882_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294600.1\|4084921_4085575_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593994.1\|4085567_4086599_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140174.1\|4086786_4087359_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997043.1\|4093253_4094057_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	3.2e-39	36.6
WP_000648601.1\|4094053_4094968_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|4095208_4096009_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000211710.1\|4096086_4096857_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644685.1\|4096904_4098263_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052751.1\|4098334_4099090_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001298887.1\|4099123_4099846_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917888.1\|4099842_4100310_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001297205.1\|4100374_4101106_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
WP_001086142.1\|4101641_4102427_+	aminopeptidase	NA	NA	NA	NA
WP_001236649.1\|4102563_4103043_-	hypothetical protein	NA	NA	NA	NA
WP_000908057.1\|4103052_4103967_-	hypothetical protein	NA	NA	NA	NA
WP_001284200.1\|4104010_4104493_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_001087741.1\|4104516_4105869_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_122987046.1\|4105879_4109314_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_001240544.1\|4109422_4110838_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_000088873.1\|4110842_4111586_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_000614396.1\|4111582_4114342_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	9.4e-83	30.6
WP_000343303.1\|4114350_4115112_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246421.1\|4115116_4116448_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080149.1\|4116450_4116975_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_001113725.1\|4116971_4118252_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000348793.1\|4118276_4119359_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000393853.1\|4119322_4121173_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000611748.1\|4121176_4121590_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_12

4689659 : 4732093

Enterobacteria_phage(58.82%)

head,integrase,tail,lysis,capsid,portal

attL 4687937:4687952|attR 4711088:4711103

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4687937:4687952	attL	NA	NA	NA	NA
WP_000533642.1\|4689659_4690730_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
WP_001303849.1\|4690707_4690926_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000545745.1\|4690965_4691133_-	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
WP_000120064.1\|4691375_4691978_+	hypothetical protein	NA	NA	NA	NA
WP_000763367.1\|4692188_4692410_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.9e-35	100.0
WP_000188870.1\|4692508_4692724_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548541.1\|4692800_4692992_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	4.7e-26	98.4
WP_000682318.1\|4692964_4693147_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
WP_000186833.1\|4693143_4693824_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
WP_000100847.1\|4693820_4694606_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995433.1\|4694611_4694908_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	6.2e-49	99.0
WP_000233576.1\|4694983_4695190_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000858975.1\|4695787_4696477_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067458.1\|4696582_4696813_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182903.1\|4696882_4697422_+	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	1.2e-61	66.1
WP_000147903.1\|4697418_4698438_+	replication protein	A0A0M5M7Y1	Salmonella_phage	9.7e-110	63.4
WP_000788812.1\|4698434_4699136_+	hypothetical protein	M1FJ72	Enterobacteria_phage	1.4e-128	98.7
WP_000145901.1\|4699132_4699435_+	protein ren	M1FPD5	Enterobacteria_phage	6.1e-44	97.8
WP_000338663.1\|4700586_4700826_+	hypothetical protein	NA	NA	NA	NA
WP_001391403.1\|4701402_4701654_+	hypothetical protein	NA	NA	NA	NA
WP_072147432.1\|4701750_4701852_+	hypothetical protein	NA	NA	NA	NA
WP_001053034.1\|4701848_4702304_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	4.9e-61	67.5
WP_000224912.1\|4702303_4702474_+	hypothetical protein	K7P7K0	Enterobacteria_phage	1.4e-13	69.8
WP_000774504.1\|4702466_4702757_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
WP_000971074.1\|4703111_4703252_+	YlcG family protein	K7PHH3	Enterobacteria_phage	6.5e-09	69.8
WP_001204791.1\|4703337_4703721_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.4e-55	83.3
WP_000737263.1\|4703909_4704992_-	porin OmpD	Q1MVN1	Enterobacteria_phage	4.4e-161	78.7
WP_000839596.1\|4705580_4705796_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135297.1\|4705795_4706293_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	3.2e-90	97.6
WP_000092234.1\|4706289_4706727_+\|lysis	lysis protein	K7P710	Enterobacteria_phage	3.0e-68	94.5
WP_001028465.1\|4706931_4707453_+	KilA-N domain-containing protein	K7P7K9	Enterobacteria_phage	1.5e-93	100.0
WP_000079508.1\|4707802_4708213_-	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_000105084.1\|4708269_4708503_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	7.3e-21	94.4
WP_000453580.1\|4708891_4709437_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.8e-95	100.0
WP_000198149.1\|4711332_4711539_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
4711088:4711103	attR	NA	NA	NA	NA
WP_001316944.1\|4711535_4713137_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.2e-311	99.8
WP_000123216.1\|4713117_4714437_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.4e-230	97.7
WP_001299443.1\|4714446_4714779_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
WP_000063238.1\|4714834_4715860_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	4.7e-189	97.9
WP_000158875.1\|4715901_4716297_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
WP_000785282.1\|4716308_4716662_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
WP_000975081.1\|4716673_4717252_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
WP_000683129.1\|4717248_4717644_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
WP_001390429.1\|4717651_4718392_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.8e-129	97.2
WP_000479200.1\|4718407_4718830_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.4e-59	85.0
WP_000459457.1\|4718811_4719246_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840297.1\|4719238_4721800_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	97.8
WP_000847379.1\|4721796_4722126_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001152576.1\|4722125_4722824_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.7e-132	98.3
WP_000140717.1\|4722829_4723573_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.1e-146	96.8
WP_000090917.1\|4723509_4724142_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_000515639.1\|4724202_4727700_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.6
WP_001233090.1\|4727770_4728370_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	8.2e-109	97.5
WP_001387657.1\|4728434_4731509_+\|tail	prophage tail fiber N-terminal domain-containing protein	U5N099	Enterobacteria_phage	2.5e-68	82.1
WP_000885623.1\|4731508_4732093_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.2e-105	95.4

DBSCAN-SWA_13

4997011 : 5059874

Escherichia_phage(94.29%)

tail,bacteriocin,lysis,terminase,capsid,holin,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000013658.1\|4997011_4998322_-	DUF3596 domain-containing protein	A0A0P0ZGA8	Escherichia_phage	9.2e-254	100.0
WP_001208773.1\|4998374_4998659_-	excisionase family protein	G9L654	Escherichia_phage	9.1e-50	100.0
WP_000497815.1\|4998704_4998956_-	DUF4222 domain-containing protein	G9L6F5	Escherichia_phage	8.4e-39	100.0
WP_000994790.1\|4999320_4999674_-	DUF1627 domain-containing protein	A0A0P0ZH73	Escherichia_phage	3.5e-59	100.0
WP_001291842.1\|4999709_4999922_-	DUF1382 family protein	A0A0P0ZG72	Escherichia_phage	2.7e-30	100.0
WP_000163446.1\|4999881_5000508_-	adenine methylase	A0A0P0ZG10	Escherichia_phage	8.0e-123	100.0
WP_000809302.1\|5000504_5000936_-	hypothetical protein	A0A2R2Z303	Escherichia_phage	7.3e-75	100.0
WP_000203831.1\|5000991_5001630_-	phage antirepressor Ant	A0A0P0ZG08	Escherichia_phage	4.2e-119	100.0
WP_000206786.1\|5001985_5002882_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	5.4e-173	100.0
WP_001014298.1\|5002884_5003076_-	hypothetical protein	A0A0P0ZG45	Escherichia_phage	3.3e-27	100.0
WP_000034212.1\|5003077_5003485_-	ead/Ea22-like family protein	A0A125RPT9	Escherichia_phage	1.3e-70	100.0
WP_000206047.1\|5003481_5004207_-	ead/Ea22-like family protein	A0A0P0ZFU9	Escherichia_phage	3.3e-128	100.0
WP_001159715.1\|5004357_5004753_-	hypothetical protein	A0A0P0ZG44	Escherichia_phage	1.1e-69	100.0
WP_000080417.1\|5004829_5005651_-	DUF2303 family protein	A0A2R2Z323	Escherichia_phage	2.3e-149	100.0
WP_001071603.1\|5005714_5006062_-	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	5.9e-59	100.0
WP_000344637.1\|5006136_5006724_-	hypothetical protein	A0A0N7KZV4	Escherichia_phage	1.2e-107	100.0
WP_000187063.1\|5006723_5007413_-	YqaJ viral recombinase family protein	A0A0P0ZFI7	Escherichia_phage	3.5e-135	100.0
WP_000459721.1\|5007409_5008360_-	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	1.1e-179	100.0
WP_000995345.1\|5008376_5008658_-	host nuclease inhibitor GamL	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
WP_000934197.1\|5008678_5008960_-	hypothetical protein	A0A0P0ZGC3	Escherichia_phage	3.0e-45	100.0
WP_001369605.1\|5009254_5009929_-	ORF6N domain-containing protein	A0A0P0ZGP9	Escherichia_phage	1.3e-123	100.0
WP_016051777.1\|5010184_5010970_-	Rha family transcriptional regulator	A0A0P0ZG86	Escherichia_phage	9.4e-145	100.0
WP_001064714.1\|5011586_5012540_-	type II restriction endonuclease BsuBI	A0A0P0ZG22	Escherichia_phage	7.0e-187	100.0
WP_000939558.1\|5012536_5014006_-	Eco57I restriction-modification methylase domain-containing protein	A0A2R2Z316	Escherichia_phage	3.5e-286	100.0
WP_001056250.1\|5014100_5014814_-	LexA family transcriptional regulator	A0A2R2X2B0	Escherichia_phage	6.3e-132	100.0
WP_001240876.1\|5014909_5015113_+	Cro/Cl family transcriptional regulator	A0A2R2Z333	Escherichia_phage	2.0e-30	100.0
WP_001369601.1\|5015283_5015478_+	hypothetical protein	NA	NA	NA	NA
WP_001271433.1\|5015644_5016022_+	hypothetical protein	A0A2R2Z329	Escherichia_phage	4.0e-61	100.0
WP_000913116.1\|5016015_5017536_+	DEAD/DEAH box helicase	A0A0N7KZV6	Escherichia_phage	1.4e-306	100.0
WP_001260358.1\|5017525_5018497_+	toprim domain-containing protein	A0A0P0ZFY3	Escherichia_phage	6.5e-196	100.0
WP_000402092.1\|5018496_5018946_+	DUF1367 family protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
WP_000813671.1\|5018953_5019517_+	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
WP_000144767.1\|5019513_5019708_+	phage NinH family protein	A0A0P0ZGE1	Escherichia_phage	8.4e-31	100.0
WP_001204859.1\|5019700_5020135_+	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
WP_001356551.1\|5020383_5020536_+	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
WP_000649753.1\|5020918_5021878_+	Shiga toxin Stx2c subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
WP_000738068.1\|5021889_5022159_+	Shiga toxin Stx2a subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
WP_000874432.1\|5022644_5024582_+	SASA family carbohydrate esterase	A0A0P0ZGE0	Escherichia_phage	0.0e+00	100.0
WP_000143458.1\|5024718_5024898_+	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_001290230.1\|5024938_5025184_+	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
WP_001072901.1\|5025261_5025477_+\|holin	class II holin family protein	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
WP_000087737.1\|5025481_5026015_+	lysozyme	A0A0P0ZGA2	Escherichia_phage	5.1e-102	100.0
WP_001056879.1\|5026288_5026858_+	hypothetical protein	A0A0N7KZV8	Escherichia_phage	1.8e-105	100.0
WP_000455397.1\|5026857_5027007_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	4.8e-18	100.0
WP_024017835.1\|5027009_5027447_+\|lysis	lysis protein	A0A0P0ZFH2	Escherichia_phage	1.4e-70	100.0
WP_001109019.1\|5027649_5028201_+	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	4.5e-101	100.0
WP_001086073.1\|5028493_5029300_+\|terminase	terminase	A0A0P0ZG40	Escherichia_phage	1.3e-133	100.0
WP_000143988.1\|5029280_5030987_+\|terminase	terminase	A0A2R2Z350	Escherichia_phage	0.0e+00	100.0
WP_000787034.1\|5030986_5033131_+\|portal	portal protein	A0A0P0ZG74	Escherichia_phage	0.0e+00	100.0
WP_000345010.1\|5033288_5034296_+	hypothetical protein	A0A2R2Z355	Escherichia_phage	2.3e-180	100.0
WP_000214474.1\|5034319_5035534_+\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
WP_001140442.1\|5035589_5035979_+	hypothetical protein	A0A2R2Z353	Escherichia_phage	9.9e-63	100.0
WP_001367376.1\|5036028_5036490_+	hypothetical protein	A0A0P0ZG73	Escherichia_phage	6.0e-75	100.0
WP_000829200.1\|5036473_5037037_+	hypothetical protein	A0A2R2Z349	Escherichia_phage	3.2e-102	100.0
WP_000207927.1\|5037036_5037687_+	hypothetical protein	A0A0P0ZGL1	Escherichia_phage	4.6e-121	100.0
WP_000117967.1\|5037683_5039876_+\|tail	tail fiber protein	A0A0H4IU95	Shigella_phage	1.9e-86	98.0
WP_000513231.1\|5039962_5040475_+	receptor recognizing protein Gp38	A0A0P0ZFL3	Escherichia_phage	1.2e-92	100.0
WP_001391593.1\|5040708_5042334_+	hypothetical protein	A0A0P0ZG21	Escherichia_phage	0.0e+00	100.0
WP_000197192.1\|5042330_5043599_+	host specificity protein J	A0A2R2Z364	Escherichia_phage	4.9e-220	100.0
WP_000455634.1\|5043613_5043892_+	outer membrane protein	A0A2R2Z367	Escherichia_phage	1.1e-50	100.0
WP_096849982.1\|5043897_5044515_+	hypothetical protein	A0A2R2Z362	Escherichia_phage	3.3e-121	99.5
WP_000835360.1\|5044605_5045340_+	Ail/Lom family outer membrane beta-barrel protein	A0A2R2Z365	Escherichia_phage	1.3e-135	100.0
WP_000078907.1\|5045572_5045713_+	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
WP_000035558.1\|5045769_5046171_+	hypothetical protein	A0A2R2Z359	Escherichia_phage	3.7e-73	100.0
WP_000509489.1\|5046264_5046921_+	hypothetical protein	A0A0P0ZGB7	Escherichia_phage	2.4e-109	100.0
WP_000455649.1\|5046923_5047370_+	hypothetical protein	A0A2R2Z357	Escherichia_phage	6.2e-77	100.0
WP_000540391.1\|5047379_5047631_+\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
WP_000012452.1\|5047641_5048907_+	hypothetical protein	A0A0P0ZFI5	Escherichia_phage	2.4e-206	100.0
WP_000331685.1\|5048976_5057358_+	hypothetical protein	A0A0P0ZFK4	Escherichia_phage	0.0e+00	100.0
WP_001273658.1\|5058289_5058463_+	general stress protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
WP_001326838.1\|5058545_5059874_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	3.7e-234	99.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP027395

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

53039 : 63337

Salmonella_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000239590.1\|53039_53915_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_000608644.1\|54170_55433_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_001235713.1\|55996_56554_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|56736_57597_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001245884.1\|57865_58168_-	hypothetical protein	NA	NA	NA	NA
WP_000587689.1\|58164_58791_-	ParA family plasmid-partitioning AAA ATPase	E5FFJ3	Burkholderia_phage	2.0e-17	31.1
WP_000457515.1\|58994_60266_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	2.2e-143	60.4
WP_000109071.1\|60265_60703_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
WP_000618110.1\|60699_60948_-	DinI-like family protein	Q2A098	Sodalis_phage	1.9e-14	48.0
WP_023383827.1\|61366_62269_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_001310011.1\|62265_62577_+	hypothetical protein	NA	NA	NA	NA
WP_000086153.1\|62653_63337_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.1e-30	37.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP027392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5690

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000033204.1\|1387_1888_-\|transposase	transposase	A0A1B1P776	Bacillus_phage	2.4e-08	28.2
WP_000869859.1\|2323_3352_+	class 1 isoprenoid biosynthesis enzyme	NA	NA	NA	NA
WP_001387337.1\|3355_3895_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_000565591.1\|4397_4550_-	hypothetical protein	NA	NA	NA	NA
WP_000019427.1\|4709_5690_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.4e-184	98.8

DBSCAN-SWA_2

14895 : 15876

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019440.1\|14895_15876_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1

DBSCAN-SWA_3

19956 : 20193

Enterobacteria_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000239755.1\|19956_20193_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	2.0e-18	63.8

DBSCAN-SWA_4

24039 : 24669

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000621743.1\|24039_24669_+	dispersin export ABC transporter ATP-binding protein AatC	G9BWD6	Planktothrix_phage	1.2e-20	35.4

DBSCAN-SWA_5

29713 : 30495

Stx2-converting_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000624736.1\|29713_30064_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.6e-40	64.7
WP_001387845.1\|30060_30495_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.4e-19	60.3

DBSCAN-SWA_6

36755 : 37556

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001234427.1\|36755_37556_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	2.8e-43	37.5

DBSCAN-SWA_7

45280 : 52233

Stx2-converting_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000205736.1\|45280_46027_+	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.2e-09	30.9
WP_000139330.1\|46081_46642_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_000624689.1\|47300_47597_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-31	64.4
WP_000381397.1\|47909_49481_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-169	58.5
WP_000624622.1\|49500_49848_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001339397.1\|49847_50525_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000019440.1\|51252_52233_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1

DBSCAN-SWA_8

56350 : 58347

Macacine_betaherpesvirus(50.0%)

integrase

attL 54810:54823|attR 64944:64957

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
54810:54823	attL	NA	NA	NA	NA
WP_001066951.1\|56350_57091_+\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
WP_001387465.1\|57369_58347_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	8.8e-100	59.2
64944:64957	attR	NA	NA	NA	NA

DBSCAN-SWA_9

61446 : 67624

Enterobacteria_phage(50.0%)

integrase

attL 54810:54823|attR 64944:64957

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
54810:54823	attL	NA	NA	NA	NA
WP_000016961.1\|61446_62253_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.7e-54	93.9
WP_001144032.1\|62431_63076_+	ParA family protein	NA	NA	NA	NA
WP_000030204.1\|63162_63471_+	molecular chaperone GroEL	NA	NA	NA	NA
WP_000688504.1\|63884_64865_+	plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	2.2e-79	51.4
WP_001278815.1\|64857_65274_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
64944:64957	attR	NA	NA	NA	NA
WP_000457137.1\|66548_66926_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.1e-25	47.2
WP_032159540.1\|67057_67624_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	4.8e-34	45.6

DBSCAN-SWA_10

73621 : 74346

Stx2-converting_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001401984.1\|73621_74002_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	2.7e-65	98.4
WP_000612591.1\|73998_74346_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027394

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP027395

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP027392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection